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Gene WDFY3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
334 supporting clones for gene WDFY3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW136013   .a 1 to 268 267 to 1   tiling clone,   267/273
(97 %)
3 diff
(99.0 %id)
AI990306 pooled germ cell tumors .a 26 to 208 183 to 1       183/183
(100 %)
3 diff
(98.4 %id)
AI992323 pooled germ cell tumors .a 27 to 227 201 to 1       201/201
(100 %)
0 diff
(100 %id)
NM_014991.4   .a 262 to 14567 1 to 14306 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/19 A in genome downstream of last aligned base) 14306/14306
(100 %)
0 diff
(100 %id)
BE503740 carcinoid, lung .a 276 to 605 1 to 330   tiling clone, Submitted on the opposite strand 330/330
(100 %)
1 diff
(99.7 %id)
AF538685   .a 441 to 11250 72 to 10881 N2944T tiling clone,   10815/10821
(99 %)
9 diff
(100.0 %id)
DN994153 brain, whole brain .a 495 to 1080 32 to 617   tiling clone,   586/617
(94 %)
6 diff
(99.1 %id)
EH308041   .a 582 to 661 1 to 80       80/81
(98 %)
2 diff
(97.6 %id)
BF902151 marrow .a 697 to 1086 15 to 407       393/407
(96 %)
6 diff
(98.6 %id)
CN283427 embryonic stem cells, cell lines H1, H7, andH9 .a 1766 to 2458 1 to 694       694/694
(100 %)
6 diff
(99.2 %id)
BP314327 mammary gland .a 1819 to 2399 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BI013548 lung_tumor .a 2398 to 2732 368 to 34       335/368
(91 %)
1 diff
(99.8 %id)
BI047559 stomach .a 2398 to 2792 405 to 12       394/405
(97 %)
0 diff
(100 %id)
BE176902 head_neck .a 2750 to 3167 13 to 430       418/434
(96 %)
12 diff
(97.3 %id)
BE177058 head_neck .a 2861 to 3106 258 to 11     Submitted on the opposite strand 248/258
(96 %)
5 diff
(98.1 %id)
BM259606 hippocampus .a 3219 to 3664 1 to 446       446/446
(100 %)
0 diff
(100 %id)
CV397110 nervous_normal .a 3677 to 3934 14 to 276       263/276
(95 %)
6 diff
(97.9 %id)
AV721302 hypothalamus .a 3815 to 4337 1 to 527       527/874
(60 %)
12 diff
(98.7 %id)
BF814067 colon_ins .a 3841 to 4385 29 to 571       543/571
(95 %)
24 diff
(95.8 %id)
EC468763 Prostate .a 4078 to 4156 84 to 7       78/94
(82 %)
0 diff
(100 %id)
BP310505 brain .a 4578 to 5163 1 to 584       584/584
(100 %)
5 diff
(99.2 %id)
DA134825.
matches multiple genes
alzheimer cortex .a 4781 to 5346 2 to 567   capped also hits gene C21orf131 566/566
(100 %)
0 diff
(100 %id)
BE093844 breast .a 5080 to 5329 28 to 278       251/278
(90 %)
6 diff
(97.9 %id)
BF356723 head_neck .a 5082 to 5292 228 to 17       212/228
(92 %)
1 diff
(99.6 %id)
BF356748 head_neck .a 5082 to 5287 207 to 1       207/207
(100 %)
1 diff
(99.6 %id)
BP310917 brain .a 5237 to 5820 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP332496 renal proximal tubule .a 5601 to 6185 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BX953629   .a 5816 to 6503 1 to 688       688/688
(100 %)
0 diff
(100 %id)
BU101922   .a 6376 to 7205 1 to 831       831/831
(100 %)
5 diff
(99.4 %id)
BC150246 Clones donated by Kazusa DNA Research Inst. .a 6573 to 14567 16 to 8010   AAA Possibly primed on the genome, locally A rich (16/19 A in genome downstream of last aligned base) 7995/8010
(99 %)
6 diff
(100.0 %id)
AB023210 brain .a 6579 to 14576 1 to 7998   tiling clone, available from KIAA,   7998/7998
(100 %)
0 diff
(100 %id)
BU101923   .a 6674 to 7364 692 to 1       692/696
(99 %)
5 diff
(99.3 %id)
BP320860 placenta .a 7053 to 7650 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
BX648153 human cervix .a 7372 to 14510 4 to 7143   available from DKFZ,   7140/7145
(99 %)
9 diff
(99.9 %id)
FN128613 breast carcinoma .a 7621 to 7673 1 to 53       53/54
(98 %)
3 diff
(94.5 %id)
BX648077 human testis .a 7697 to 14323 1 to 6625   available from DKFZ, AAA   6625/6625
(100 %)
6 diff
(100.0 %id)
AA878266 pharynx, squamous cell carcinoma .a 7941 to 8268 328 to 1       328/333
(98 %)
2 diff
(99.4 %id)
BP251488 hippocampus .a 7987 to 8569 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
DA317776 hippocampus .a 8154 to 8697 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA789331 brain .a 8416 to 8979 2 to 566   capped   565/565
(100 %)
8 diff
(98.6 %id)
DA795412 brain .a 8440 to 9005 2 to 569   capped   568/573
(99 %)
4 diff
(99.4 %id)
DA202777 brain .a 8547 to 9126 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
DA625073 Kidney .a 8616 to 9144 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BP234539 coronary artery .a 8792 to 9378 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA308513 hippocampus .a 8793 to 9363 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BC065502 Duodenum, adenocarcinoma .a 8912 to 11598 1 to 2687   available from MGC, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 2687/2687
(100 %)
0 diff
(100 %id)
DA406689 thalamus .a 8918 to 9482 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BQ370646 placenta_normal .a 9427 to 9821 16 to 408       393/411
(95 %)
12 diff
(97.1 %id)
BI056568 placenta_normal .a 9437 to 9821 1 to 387       387/390
(99 %)
16 diff
(95.9 %id)
BQ369908 placenta_normal .a 9510 to 9744 238 to 6       233/260
(89 %)
2 diff
(99.3 %id)
BQ685440 ductal carcinoma, cell line, Pancreas .a 9566 to 10415 1 to 856       856/866
(98 %)
13 diff
(98.5 %id)
DA534390 brain .a 9656 to 9984 2 to 330   capped   329/329
(100 %)
0 diff
(100 %id)
DA672013   .a 9672 to 10266 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
BX446090 brain, fetal brain .a 9767 to 10213 1 to 443       443/548
(80 %)
21 diff
(96.2 %id)
CN372788 embryonic stem cells, cell lines H1, H7, andH9 .a 9786 to 10314 1 to 529       529/529
(100 %)
0 diff
(100 %id)
BE162407 head_neck .a 9814 to 10151 1 to 339       339/339
(100 %)
10 diff
(97.1 %id)
Z45668 brain, total brain .a 9823 to 10043 1 to 221       221/228
(96 %)
1 diff
(99.6 %id)
BE162410 head_neck .a 9829 to 10151 9 to 331       323/331
(97 %)
1 diff
(99.7 %id)
CN372790 embryonic stem cells, cell lines H1, H7, andH9 .a 9848 to 10302 1 to 456       456/456
(100 %)
5 diff
(99.0 %id)
AK092394 placenta .a 9883 to 11824 1 to 1942   available from FLJ,   1942/1942
(100 %)
3 diff
(99.9 %id)
AX747520   .a 9883 to 11824 1 to 1942       1942/1942
(100 %)
3 diff
(99.9 %id)
DA095505 cerebellum .a 9883 to 10458 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA835850 placenta .a 9884 to 10355 2 to 474   capped   473/473
(100 %)
2 diff
(99.6 %id)
BP332321 renal proximal tubule .a 9885 to 10464 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BC015214 Colon, adenocarcinoma .a 9936 to 11823 1 to 1888   available from MGC, AAA   1888/1888
(100 %)
0 diff
(100 %id)
BE867745 adenocarcinoma, colon .a 9958 to 10646 1 to 674   available from MGC,   674/892
(75 %)
17 diff
(98.1 %id)
CV029704 mixed .a 9988 to 10146 1 to 159       159/159
(100 %)
0 diff
(100 %id)
BQ340912 nervous_normal .a 10020 to 10314 1 to 296       296/296
(100 %)
12 diff
(96.0 %id)
EH346993   .a 10025 to 10092 1 to 68       68/68
(100 %)
0 diff
(100 %id)
BF959765 nervous_normal .a 10031 to 10213 342 to 160       183/343
(53 %)
0 diff
(100 %id)
BQ340728 nervous_normal .a 10035 to 10232 14 to 214       199/218
(91 %)
7 diff
(96.8 %id)
BQ310529 breast .a 10107 to 10582 1 to 476       476/488
(97 %)
9 diff
(98.2 %id)
TI_1948154072   .a 10213 to 11249 1159 to 128       1032/1394
(74 %)
46 diff
(96.8 %id)
TI_1948154253   .a 10214 to 11249 1152 to 127       1026/1393
(73 %)
33 diff
(97.7 %id)
DR003699 hippocampus .a 10348 to 11016 5 to 673       669/673
(99 %)
6 diff
(99.2 %id)
TI_1948154157   .a 10391 to 11249 980 to 128       853/1376
(61 %)
11 diff
(99.3 %id)
TI_1948154332   .a 10391 to 11249 988 to 129       860/1394
(61 %)
7 diff
(99.5 %id)
CV030084 mixed .a 10405 to 10870 1 to 466       466/466
(100 %)
7 diff
(98.5 %id)
TI_1948074365   .a 10405 to 11254 128 to 978   fully sequenced,   851/978
(87 %)
28 diff
(97.2 %id)
TI_1948074551   .a 10405 to 10532 126 to 253   fully sequenced,   128/156
(82 %)
6 diff
(96.2 %id)
TI_1948074739   .a 10405 to 10545 127 to 267   fully sequenced,   141/168
(83 %)
6 diff
(96.5 %id)
TI_1948074923   .a 10405 to 11254 125 to 973   fully sequenced,   849/973
(87 %)
25 diff
(97.5 %id)
TI_1948074740   .a 10515 to 11249 862 to 127   fully sequenced,   736/862
(85 %)
8 diff
(99.1 %id)
TI_1948074552   .a 10523 to 11249 861 to 126   fully sequenced,   736/861
(85 %)
29 diff
(96.7 %id)
CN372791 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 10699 to 11406 1 to 708       708/708
(100 %)
0 diff
(100 %id)
DA228274 brain .a 10797 to 11363 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA236515 brain .a 10892 to 11469 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
TI_1948074366   .a 10898 to 11249 477 to 126   fully sequenced,   352/477
(73 %)
0 diff
(100 %id)
TI_1948074924   .a 10898 to 11249 479 to 128   fully sequenced,   352/479
(73 %)
0 diff
(100 %id)
FN133126 breast carcinoma .a 10959 to 11049 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
DA804246 brain .a 11015 to 11561 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CB529020 Aveolar Macrophage, lung .a 11092 to 11824 750 to 19   AAA   732/732
(100 %)
1 diff
(99.9 %id)
BI791795 Pancreas, Purified pancreatic islet .a 11120 to 11442 7 to 328   fully sequenced,   322/328
(98 %)
7 diff
(97.9 %id)
BI439196 Pancreas, Purified pancreatic islet .a 11127 to 11688 16 to 577       562/577
(97 %)
9 diff
(98.5 %id)
BI713760 Pancreas, Purified pancreatic islet .a 11127 to 11536 9 to 418   fully sequenced,   410/418
(98 %)
2 diff
(99.6 %id)
CA314071 Human Lung Epithelial cells, lung .a 11127 to 11823 715 to 19   AAA   697/702
(99 %)
1 diff
(99.9 %id)
BM929432 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 11134 to 11801 1 to 668       668/668
(100 %)
2 diff
(99.8 %id)
CX870380 embryonic stem .a 11225 to 11967 1 to 743       743/743
(100 %)
0 diff
(100 %id)
BU633085 cell lines, Chondrosarcoma .a 11244 to 11824 599 to 19   AAA   581/581
(100 %)
0 diff
(100 %id)
AI806395 pooled .a 11257 to 11824 568 to 1       568/568
(100 %)
6 diff
(99.0 %id)
DB320590 Kidney .a 11267 to 11824 558 to 1       558/558
(100 %)
0 diff
(100 %id)
AI632805 Kidney .a 11274 to 11824 570 to 20   AAA   551/551
(100 %)
0 diff
(100 %id)
BI438868 Pancreas, Purified pancreatic islet .a 11304 to 11827 526 to 3       524/526
(99 %)
0 diff
(100 %id)
AI628991 Kidney .a 11320 to 11824 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AI766238 Kidney .a 11346 to 11825 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AW614563 Kidney .a 11352 to 11827 482 to 7       476/482
(98 %)
0 diff
(100 %id)
AW338128 adenocarcinoma, Pancreas .a 11355 to 11823 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AW614988 Kidney .a 11358 to 11827 476 to 7       470/476
(98 %)
0 diff
(100 %id)
AI953486 Kidney .a 11369 to 11827 461 to 2       460/461
(99 %)
0 diff
(100 %id)
AI493135 Kidney .a 11377 to 11825 449 to 1       449/449
(100 %)
2 diff
(99.6 %id)
C21214   .a 11388 to 11793 1 to 412       412/412
(100 %)
7 diff
(98.4 %id)
AA837017 lung, small cell carcinoma .a 11388 to 11827 441 to 1       441/441
(100 %)
1 diff
(99.8 %id)
AW242029 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 11412 to 11827 418 to 3       416/422
(98 %)
0 diff
(100 %id)
BI713563 Pancreas, Purified pancreatic islet .a 11412 to 11828 417 to 1   fully sequenced,   417/417
(100 %)
3 diff
(99.3 %id)
AI023914 liver and spleen .a 11441 to 11824 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AI205696   .a 11455 to 11827 375 to 2       374/375
(99 %)
0 diff
(100 %id)
BI667081 brain, hypothalamus .a 11473 to 12176 1 to 709       709/718
(98 %)
14 diff
(98.1 %id)
CD691294 normal nasopharynx .a 11476 to 11793 38 to 355       318/355
(89 %)
6 diff
(98.4 %id)
TI_44342594   .a 11476 to 12176 86 to 791       706/800
(88 %)
12 diff
(98.5 %id)
BF837282 head_neck .a 11506 to 11831 9 to 331       323/331
(97 %)
6 diff
(98.2 %id)
BI713496 Pancreas, Purified pancreatic islet .a 11506 to 11828 323 to 1   fully sequenced,   323/323
(100 %)
4 diff
(98.8 %id)
AW889013 nervous_tumor .a 11509 to 11857 354 to 6       349/354
(98 %)
0 diff
(100 %id)
TI_157607706   .a 11510 to 11822 445 to 133   AAA   313/532
(58 %)
2 diff
(99.7 %id)
CN372792 embryonic stem cells, cell lines H1, H7, andH9 .a 11530 to 11968 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
BF837229 head_neck .a 11542 to 11975 1 to 433       433/433
(100 %)
9 diff
(98.0 %id)
BQ008027 Chondrosarcoma, Left Pelvis .a 11563 to 12286 742 to 19   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 724/724
(100 %)
4 diff
(99.5 %id)
BF837318 head_neck .a 11566 to 11838 1 to 277       277/277
(100 %)
6 diff
(97.9 %id)
AI796438 2 pooled tumors (clear cell type), Kidney .a 11618 to 11827 210 to 1       210/210
(100 %)
0 diff
(100 %id)
AL536320 brain, fetal brain .a 11630 to 12537 1 to 908       908/908
(100 %)
0 diff
(100 %id)
BQ278448 mixed (pool of 40 RNAs) .a 11722 to 12298 1 to 583       583/1042
(55 %)
18 diff
(98.3 %id)
AW590462 pooled germ cell tumors .a 11773 to 12286 514 to 1       514/514
(100 %)
0 diff
(100 %id)
AW341782 carcinoid, lung .a 11818 to 12221 1 to 407     Submitted on the opposite strand 407/407
(100 %)
4 diff
(99.1 %id)
BE673805 carcinoid, lung .a 11818 to 12258 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
BF446474 carcinoid, lung .a 11818 to 12258 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
BE771116 prostate_tumor .a 11827 to 12178 1 to 351       351/351
(100 %)
6 diff
(98.3 %id)
H84372 melanocyte .a 11830 to 12211 1 to 387       387/387
(100 %)
8 diff
(98.0 %id)
BE771113 prostate_tumor .a 11849 to 12182 23 to 361       339/374
(90 %)
7 diff
(98.2 %id)
M78414   .a 11857 to 12168 311 to 1       311/311
(100 %)
1 diff
(99.7 %id)
AL701188 human skeletal muscle .a 11882 to 12462 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
CN372789 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 11902 to 12551 8 to 657       650/657
(98 %)
6 diff
(99.1 %id)
BF352013 head_neck .a 11918 to 12065 15 to 164       150/164
(91 %)
6 diff
(96.4 %id)
AI261216 Kidney .a 11973 to 12286 314 to 1       314/314
(100 %)
3 diff
(99.1 %id)
BF969933 adrenal cortex carcinoma, cell line, adrenal gland .a 11973 to 12632 1 to 660   AAA   660/909
(72 %)
19 diff
(98.0 %id)
C18259 placenta .a 12037 to 12326 1 to 290       290/290
(100 %)
1 diff
(99.7 %id)
D58950   .a 12037 to 12355 1 to 315       315/321
(98 %)
5 diff
(98.5 %id)
EC584492 Prostate .a 12082 to 12182 102 to 1       102/102
(100 %)
1 diff
(99.1 %id)
BF352014 head_neck .a 12088 to 12258 1 to 171       171/172
(99 %)
3 diff
(98.3 %id)
AA973044 pooled .a 12104 to 12468 365 to 1       365/365
(100 %)
0 diff
(100 %id)
BI086692 cervix .a 12198 to 12907 1 to 717       717/794
(90 %)
21 diff
(97.4 %id)
DB187693 liver, tumor tissue .a 12281 to 12779 2 to 503   capped   502/502
(100 %)
3 diff
(99.5 %id)
CB215338 normal endometrium, late proliferativephase, cycle day 13, uterus .a 12289 to 12581 1 to 293       293/293
(100 %)
0 diff
(100 %id)
AA382303 testis .a 12307 to 12423 1 to 117       117/117
(100 %)
0 diff
(100 %id)
DA811909 ovary, tumor tissue .a 12313 to 13013 2 to 702   capped   701/703
(99 %)
5 diff
(99.3 %id)
BX507659   .a 12320 to 12970 1 to 652       652/652
(100 %)
3 diff
(99.6 %id)
BM840329 lymph node, stomach .a 12372 to 12905 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
BM689661 eye, Retina Foveal and Macular .a 12375 to 12752 4 to 381   fully sequenced,   378/381
(99 %)
5 diff
(98.7 %id)
DA512580 brain .a 12381 to 12924 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
TI_149295468   .a 12433 to 13186 834 to 92   AAA   743/788
(94 %)
10 diff
(98.8 %id)
DA045248 bladder .a 12439 to 13006 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BQ001670 lung, Metastatic Chondrosarcoma .a 12474 to 13181 724 to 19   AAA   706/706
(100 %)
5 diff
(99.3 %id)
R09873 liver and spleen .a 12502 to 12744 1 to 250       250/251
(99 %)
11 diff
(95.7 %id)
R69669 placenta .a 12513 to 12901 1 to 393   fully sequenced,   393/393
(100 %)
9 diff
(97.8 %id)
BU683585 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 12547 to 13186 658 to 19   AAA   640/640
(100 %)
0 diff
(100 %id)
CB162073 Liver .a 12584 to 13194 623 to 13     Submitted on the opposite strand 611/623
(98 %)
0 diff
(100 %id)
DA368299 subthalamic nucleus .a 12614 to 13185 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA138451 alzheimer cortex .a 12616 to 13185 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BF195389 brain, glioblastoma (pooled) .a 12650 to 13186 537 to 1       537/537
(100 %)
0 diff
(100 %id)
BE348236 Kidney .a 12652 to 13190 539 to 1       539/539
(100 %)
0 diff
(100 %id)
AI480388 Kidney .a 12670 to 13183 516 to 3       514/516
(99 %)
0 diff
(100 %id)
AI743623 pooled .a 12670 to 13185 516 to 1       516/516
(100 %)
1 diff
(99.9 %id)
AF131845   .a 12676 to 14567 1 to 1892   AAA Possibly primed on the genome, locally A rich (16/19 A in genome downstream of last aligned base) 1892/1892
(100 %)
0 diff
(100 %id)
T79891 whole brain .a 12676 to 13108 1 to 442       442/443
(99 %)
12 diff
(97.3 %id)
AI393528 brain, glioblastoma (pooled) .a 12676 to 13188 513 to 1       513/513
(100 %)
0 diff
(100 %id)
H10876.
matches multiple genes
whole brain .a 12677 to 13118 1 to 449     also hits gene ASB1 449/450
(99 %)
12 diff
(97.4 %id)
BE929321 placenta_normal .a 12698 to 13255 568 to 11       558/570
(97 %)
0 diff
(100 %id)
AI423502 brain, glioblastoma (pooled) .a 12698 to 13186 489 to 1       489/489
(100 %)
0 diff
(100 %id)
BM661628 eye, Retina Foveal and Macular .a 12722 to 13186 483 to 19   fully sequenced, AAA   465/465
(100 %)
0 diff
(100 %id)
AI025352 parathyroid gland, parathyroid tumor .a 12731 to 13190 469 to 13   AAA   457/457
(100 %)
3 diff
(99.4 %id)
BQ721510 sympathetic trunk .a 12734 to 13603 1 to 888       888/888
(100 %)
20 diff
(97.8 %id)
AW262575 brain, three pooled meningiomas .a 12746 to 13181 436 to 1       436/436
(100 %)
0 diff
(100 %id)
R11860 whole brain .a 12747 to 13125 1 to 382       382/386
(98 %)
4 diff
(99.0 %id)
BF514129   .a 12754 to 13190 450 to 14   AAA   437/437
(100 %)
0 diff
(100 %id)
BY996347   .a 12761 to 13401 9 to 649       641/649
(98 %)
6 diff
(99.1 %id)
AI421919 brain, glioblastoma (pooled) .a 12768 to 13186 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AI698702 pooled .a 12781 to 13189 412 to 3       410/412
(99 %)
0 diff
(100 %id)
AA677526 liver and spleen .a 12788 to 13286 499 to 1       499/499
(100 %)
0 diff
(100 %id)
BF594686 Kidney .a 12795 to 13186 416 to 25   AAA   392/392
(100 %)
0 diff
(100 %id)
AI657186 pooled germ cell tumors .a 12804 to 13005 202 to 1       202/202
(100 %)
1 diff
(99.6 %id)
DA679866   .a 12816 to 13380 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AA635168   .a 12825 to 13288 469 to 6       464/469
(98 %)
0 diff
(100 %id)
BG564810 Liver .a 12837 to 13504 1 to 667       667/667
(100 %)
2 diff
(99.8 %id)
H84373 melanocyte .a 12854 to 13174 321 to 1       321/321
(100 %)
2 diff
(99.4 %id)
AW449841   .a 12860 to 13186 344 to 18   AAA   327/327
(100 %)
3 diff
(99.1 %id)
AI373668 Kidney .a 12865 to 13289 425 to 1       425/425
(100 %)
0 diff
(100 %id)
R69582 placenta .a 12872 to 13276 422 to 1   fully sequenced,   422/422
(100 %)
36 diff
(91.5 %id)
AI365023 pooled germ cell tumors .a 12897 to 13186 290 to 1       290/290
(100 %)
1 diff
(99.7 %id)
BM545809 ovary (pool of 3) .a 12910 to 13685 101 to 880       780/1058
(73 %)
10 diff
(99.1 %id)
AI868798 pooled .a 12950 to 13185 236 to 1       236/236
(100 %)
0 diff
(100 %id)
AW377635 colon .a 13006 to 13683 1 to 677       677/677
(100 %)
20 diff
(97.1 %id)
N28465 melanocyte .a 13015 to 13383 1 to 371       371/528
(70 %)
4 diff
(99.3 %id)
AI222518 Kidney .a 13017 to 13289 276 to 4       273/276
(98 %)
0 diff
(100 %id)
BQ960724 sciatic nerve .a 13019 to 13827 1 to 820       820/963
(85 %)
14 diff
(98.6 %id)
CN334794 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 13025 to 13692 1 to 668       668/668
(100 %)
0 diff
(100 %id)
AW189589 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 13052 to 13187 137 to 1       137/137
(100 %)
1 diff
(99.3 %id)
AW377633 colon .a 13058 to 13719 657 to 1       657/681
(96 %)
31 diff
(95.5 %id)
AA906494 pooled .a 13072 to 13194 123 to 2       122/123
(99 %)
0 diff
(100 %id)
BQ434004 embryonal carcinoma, cell line, testis .a 13080 to 13940 1 to 868       868/874
(99 %)
21 diff
(97.6 %id)
BG545872 lung .a 13087 to 13825 1 to 741       741/752
(98 %)
6 diff
(99.3 %id)
CB128577 Liver .a 13109 to 13808 1 to 701       701/701
(100 %)
1 diff
(99.9 %id)
BF374878 stomach .a 13123 to 13461 338 to 5       334/342
(97 %)
0 diff
(100 %id)
AW377631 colon .a 13124 to 13760 653 to 14       640/653
(98 %)
0 diff
(100 %id)
R62415 breast .a 13223 to 13654 1 to 447       447/449
(99 %)
28 diff
(93.8 %id)
AW235514 Kidney .a 13227 to 13461 235 to 1       235/239
(98 %)
0 diff
(100 %id)
AW449885   .a 13237 to 13460 239 to 16   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 224/224
(100 %)
1 diff
(99.6 %id)
R65926 placenta .a 13270 to 13548 1 to 283       283/283
(100 %)
6 diff
(97.9 %id)
BF527766 anaplastic oligodendroglioma with 1p/19qloss, brain .a 13271 to 14000 1 to 711       711/971
(73 %)
28 diff
(97.2 %id)
BE940688 uterus_tumor .a 13324 to 13807 483 to 1       483/483
(100 %)
8 diff
(98.4 %id)
BF341984 brain, glioblastoma with EGFR amplification .a 13325 to 13881 1 to 552       552/960
(57 %)
18 diff
(98.2 %id)
AJ239427 retinal pigment epithelium .a 13332 to 13685 1 to 363       363/476
(76 %)
14 diff
(97.1 %id)
N54129 multiple sclerosis lesions .a 13367 to 13498 1 to 132       132/132
(100 %)
0 diff
(100 %id)
BX116506 uterus .a 13404 to 14206 1 to 803       803/803
(100 %)
2 diff
(99.8 %id)
AA031868 uterus .a 13407 to 13686 1 to 281       281/281
(100 %)
2 diff
(99.3 %id)
BF858134 prostate_tumor .a 13421 to 13896 1 to 474       474/474
(100 %)
6 diff
(98.8 %id)
BF854293 lung_normal .a 13436 to 13972 7 to 542       536/542
(98 %)
6 diff
(98.9 %id)
H55747   .a 13445 to 14223 1 to 780       780/780
(100 %)
10 diff
(98.8 %id)
AA321218 bone marrow .a 13508 to 13741 1 to 234       234/234
(100 %)
0 diff
(100 %id)
AL536319 brain, fetal brain .a 13569 to 14489 959 to 35       925/959
(96 %)
74 diff
(92.3 %id)
BE178585 head_neck .a 13587 to 13957 379 to 1     Submitted on the opposite strand 379/379
(100 %)
19 diff
(95.0 %id)
FN092879 breast carcinoma .a 13587 to 13693 1 to 107       107/108
(99 %)
1 diff
(99.1 %id)
BE762760 nervous_tumor .a 13615 to 13800 8 to 191       184/191
(96 %)
6 diff
(96.9 %id)
BF997243 placenta_normal .a 13650 to 14126 493 to 15       479/493
(97 %)
0 diff
(100 %id)
ES313143 beard hair, skin .a 13666 to 13786 1 to 121       121/121
(100 %)
0 diff
(100 %id)
BQ373300 prostate_tumor .a 13697 to 14150 473 to 22       452/473
(95 %)
0 diff
(100 %id)
BQ021905 placenta .a 13723 to 14323 618 to 18   AAA   601/601
(100 %)
3 diff
(99.6 %id)
BU752958 placenta .a 13745 to 14323 596 to 18   AAA   579/579
(100 %)
1 diff
(99.9 %id)
BQ026244 placenta .a 13762 to 14323 579 to 19   AAA   561/575
(97 %)
1 diff
(99.9 %id)
AA149197 uterus .a 13767 to 14004 1 to 244   fully sequenced,   244/244
(100 %)
3 diff
(98.8 %id)
FN158360 breast carcinoma .a 13784 to 13877 1 to 93       93/98
(94 %)
2 diff
(98.0 %id)
AI623313 pooled germ cell tumors .a 13791 to 14331 554 to 14   AAA   541/541
(100 %)
1 diff
(99.9 %id)
AI741050 pooled .a 13819 to 14325 509 to 4       506/509
(99 %)
0 diff
(100 %id)
BM987247 mixed .a 13846 to 14331 504 to 19   AAA   486/486
(100 %)
0 diff
(100 %id)
BQ640530 eye, retina .a 13852 to 14446 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
BE327663 carcinoid, lung .a 13853 to 14322 471 to 2       470/471
(99 %)
0 diff
(100 %id)
AI472036 pooled .a 13854 to 14325 475 to 4       472/475
(99 %)
0 diff
(100 %id)
AA932908 Kidney .a 13860 to 14327 474 to 7       468/474
(98 %)
0 diff
(100 %id)
AI689981 carcinoid, lung .a 13868 to 14313 455 to 10       446/455
(98 %)
0 diff
(100 %id)
AI689969 carcinoid, lung .a 13872 to 14313 450 to 9       442/450
(98 %)
0 diff
(100 %id)
C02378   .a 13874 to 14209 6 to 341       336/341
(98 %)
6 diff
(98.3 %id)
AI521819 Kidney .a 13886 to 14410 525 to 1       525/525
(100 %)
0 diff
(100 %id)
BE699091 nervous_normal .a 13892 to 14113 218 to 3       216/232
(93 %)
0 diff
(100 %id)
BE739677 hypernephroma, Kidney .a 13894 to 14525 638 to 1       638/879
(72 %)
13 diff
(98.6 %id)
AW873534 pooled .a 13907 to 14329 423 to 1       423/423
(100 %)
0 diff
(100 %id)
BQ024448 placenta .a 13913 to 14323 429 to 19   AAA   411/411
(100 %)
0 diff
(100 %id)
AA031778 uterus .a 13927 to 14411 486 to 1       486/488
(99 %)
5 diff
(99.0 %id)
AW661726 pooled .a 13927 to 14330 424 to 21   AAA   404/404
(100 %)
0 diff
(100 %id)
AI341993 pooled germ cell tumors .a 13935 to 14331 411 to 15   AAA   397/397
(100 %)
0 diff
(100 %id)
BQ025830 placenta .a 13938 to 14323 404 to 19   AAA   386/386
(100 %)
0 diff
(100 %id)
DB371170 ovary, tumor tissue .a 13939 to 14511 571 to 1       571/571
(100 %)
31 diff
(94.6 %id)
BG571238 placenta .a 13953 to 14323 1 to 364   AAA   364/364
(100 %)
9 diff
(97.6 %id)
AA149198 uterus .a 13974 to 14323 357 to 1   fully sequenced,   357/357
(100 %)
2 diff
(99.5 %id)
AI025678   .a 13985 to 14325 347 to 7       341/347
(98 %)
0 diff
(100 %id)
AI633780 pooled germ cell tumors .a 13997 to 14510 520 to 7       514/520
(98 %)
0 diff
(100 %id)
BQ003872 Chondrosarcoma, Left Pelvis .a 14008 to 14576 583 to 15   AAA Possibly primed on the genome, locally A rich (16/19 A in genome downstream of last aligned base) 569/569
(100 %)
6 diff
(99.0 %id)
EH341663   .a 14021 to 14100 1 to 80       80/80
(100 %)
0 diff
(100 %id)
AI082086 senescent fibroblast .a 14027 to 14581 555 to 1   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
AW197885 pooled .a 14028 to 14327 304 to 3       302/304
(99 %)
0 diff
(100 %id)
AI185455 lung .a 14029 to 14327 301 to 3       299/301
(99 %)
0 diff
(100 %id)
AI698445 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 14030 to 14323 311 to 18   AAA   294/294
(100 %)
0 diff
(100 %id)
AA878406 ovary .a 14040 to 14346 1 to 307       307/307
(100 %)
1 diff
(99.7 %id)
AI521347 adenocarcinoma, Pancreas .a 14043 to 14323 302 to 22   AAA   281/281
(100 %)
1 diff
(99.7 %id)
AI554250 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 14043 to 14510 475 to 8       468/475
(98 %)
0 diff
(100 %id)
AI694399 carcinoid, lung .a 14060 to 14566 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
N57570 multiple sclerosis lesions .a 14081 to 14572 497 to 1       497/601
(82 %)
24 diff
(96.1 %id)
BQ129293 Islets of Langerhans, Pancreas .a 14120 to 14555 1 to 436       436/436
(100 %)
0 diff
(100 %id)
R65824 placenta .a 14139 to 14325 196 to 10       187/200
(93 %)
0 diff
(100 %id)
BE466483 Kidney .a 14139 to 14578 440 to 1       440/440
(100 %)
0 diff
(100 %id)
AI368688   .a 14140 to 14581 442 to 1       442/442
(100 %)
2 diff
(99.6 %id)
AI968652 pooled germ cell tumors .a 14151 to 14576 426 to 1       426/426
(100 %)
2 diff
(99.6 %id)
AI651821 pooled germ cell tumors .a 14158 to 14508 376 to 26   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 351/351
(100 %)
2 diff
(99.5 %id)
R36974 whole brain .a 14210 to 14581 385 to 5       381/464
(82 %)
0 diff
(100 %id)
BF244105 brain, glioblastoma .a 14224 to 14567 1 to 344   AAA Possibly primed on the genome, locally A rich (16/19 A in genome downstream of last aligned base) 344/344
(100 %)
1 diff
(99.8 %id)
FN151224 breast carcinoma .a 14227 to 14321 1 to 94       94/97
(96 %)
2 diff
(98.0 %id)
R62416 breast .a 14258 to 14561 312 to 7       306/312
(98 %)
0 diff
(100 %id)
DV461875 cochlea, ear .a 14290 to 14520 1 to 231       231/231
(100 %)
1 diff
(99.6 %id)
H10834.
matches multiple genes
whole brain .a 14307 to 14551 271 to 27   AAA also hits gene PLXNA2 245/266
(92 %)
0 diff
(100 %id)
R37605 whole brain .a 14311 to 14575 267 to 2       266/267
(99 %)
0 diff
(100 %id)
DA803383 brain .b 1 to 544 2 to 545   tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
DB327048 brain .b 2833 to 3382 549 to 1   tiling clone,   549/550
(99 %)
1 diff
(99.9 %id)
AK094910 corpus callosum .c 1 to 1917 2 to 1918   tiling clone, available from FLJ,   1918/1918
(100 %)
0 diff
(100 %id)
DA279436 corpus callosum .c 1 to 582 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB307286 corpus callosum .c 1384 to 1917 535 to 1       535/535
(100 %)
2 diff
(99.7 %id)
AW875522 pnet .c 1663 to 2187 1 to 531       530/531
(99 %)
23 diff
(95.7 %id)
AW608730 pnet .c 1859 to 2418 584 to 27   tiling clone,   558/584
(95 %)
1 diff
(99.9 %id)
AI962188 pooled germ cell tumors .d 1 to 454 1 to 455   tiling clone, Submitted on the opposite strand 453/455
(99 %)
1 diff
(99.8 %id)
AK092019   .d 212 to 3639 1 to 3428 Q388H P617L tiling clone, available from FLJ,   3428/3428
(100 %)
4 diff
(99.9 %id)
AX747315   .d 212 to 3639 1 to 3428 Q388H P617L     3428/3428
(100 %)
4 diff
(99.9 %id)
DA649503   .d 237 to 739 17 to 530   capped   523/529
(98 %)
56 diff
(89.5 %id)
CD675261 eye, lens .d 2637 to 3305 1 to 669       669/669
(100 %)
1 diff
(99.9 %id)
BF747575 breast .d 2705 to 3001 304 to 7     Submitted on the opposite strand 298/304
(98 %)
0 diff
(100 %id)
BF110483 carcinoid, lung .d 2801 to 3290 1 to 490     Submitted on the opposite strand 490/490
(100 %)
0 diff
(100 %id)
AI698152 carcinoid, lung .d 2804 to 3341 1 to 538     Submitted on the opposite strand 538/538
(100 %)
3 diff
(99.5 %id)
AI694983 carcinoid, lung .d 2804 to 3228 1 to 425     Submitted on the opposite strand 425/425
(100 %)
1 diff
(99.8 %id)
BM715010 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2903 to 3571 1 to 669   tiling clone,   669/669
(100 %)
1 diff
(99.9 %id)
DB321650   .d 3093 to 3639 547 to 1       547/547
(100 %)
1 diff
(99.9 %id)
BX092675 carcinoid, lung .d 3201 to 3664 464 to 1     Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
AW300248 Kidney .d 3234 to 3622 440 to 52       389/445
(87 %)
0 diff
(100 %id)
R40337 whole brain .d 3247 to 3647 411 to 1       411/411
(100 %)
18 diff
(95.7 %id)
BP398428 pancreatic islet .d 3279 to 3639 1 to 361     Submitted on the opposite strand 361/361
(100 %)
0 diff
(100 %id)
BE221984 Kidney .d 3284 to 3673 390 to 1       390/390
(100 %)
0 diff
(100 %id)
FN050366 breast carcinoma .d 3316 to 3417 102 to 1     Submitted on the opposite strand 102/102
(100 %)
0 diff
(100 %id)
R65876 placenta .d 3318 to 3679 1 to 369       369/374
(98 %)
16 diff
(95.8 %id)
AI791313   .d 3567 to 4016 32 to 481   tiling clone,   450/481
(93 %)
6 diff
(98.8 %id)
AI791467 metastatic prostate bone lesion .d 3567 to 3955 32 to 420       389/420
(92 %)
6 diff
(98.6 %id)
AI571917 adenocarcinoma, Pancreas .d 3608 to 4016 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
AI732512 metastatic prostate bone lesion .d 3631 to 4022 420 to 29       392/420
(93 %)
0 diff
(100 %id)
FN119057 breast carcinoma .d 3658 to 3759 1 to 102       102/103
(99 %)
6 diff
(94.2 %id)
AA541526 metastatic prostate bone lesion .d 3700 to 4018 342 to 24       319/344
(92 %)
0 diff
(100 %id)
BG928354 cartilage .d 3720 to 4275 86 to 641       556/573
(97 %)
6 diff
(99.0 %id)
BF002955 Prostate .d 3857 to 4002 146 to 1       146/146
(100 %)
0 diff
(100 %id)
DA312066 hippocampus .d 3929 to 4489 2 to 562   tiling clone, capped   561/562
(99 %)
1 diff
(99.9 %id)
R65781 placenta .d 4218 to 4374 158 to 2       157/158
(99 %)
0 diff
(100 %id)
CV339769 breast .e 1 to 630 632 to 3   tiling clone, Submitted on the opposite strand 629/632
(99 %)
23 diff
(96.4 %id)
CV339792 breast .e 19 to 649 1 to 625   tiling clone,   625/633
(98 %)
29 diff
(95.5 %id)
BG202473   .e 334 to 1116 7 to 786   tiling clone,   780/788
(98 %)
26 diff
(96.8 %id)
BC013377 Ovary, adenocarcinoma .f 1 to 1907 1 to 1907 exact tiling clone, available from MGC, AAA   1907/1907
(100 %)
2 diff
(99.9 %id)
BE898282 adenocarcinoma cell line, ovary .f 20 to 826 1 to 797   available from MGC,   797/913
(87 %)
30 diff
(96.8 %id)
BC148294 PCR rescued clones .f 298 to 1394 1 to 1097 exact tiling clone,   1097/1105
(99 %)
1 diff
(100.0 %id)
BC119633 PCR rescued clones .f 298 to 1394 1 to 1097 exact     1097/1097
(100 %)
0 diff
(100 %id)
BC148298 PCR rescued clones .f 298 to 1394 1 to 1097 exact     1097/1105
(99 %)
1 diff
(100.0 %id)
BF057614 fibrotheoma, ovary .g 1 to 697 1 to 697   tiling clone, Submitted on the opposite strand 697/698
(99 %)
7 diff
(99.0 %id)
AW057910 fibrotheoma, ovary .g 19 to 481 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
BP233999 coronary artery .g 238 to 818 1 to 581 K139X T145X     581/581
(100 %)
1 diff
(99.9 %id)
BP234018 coronary artery .g 238 to 819 1 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AW898267 nervous_normal .h 1 to 564 566 to 6 K3N L4F S5Q K6E N7L ... tiling clone,   561/570
(98 %)
13 diff
(97.8 %id)
AW898266 nervous_normal .h 28 to 578 557 to 1   tiling clone,   557/557
(100 %)
36 diff
(93.6 %id)
AW815105 stomach .i 1 to 640 9 to 647   tiling clone,   639/647
(98 %)
13 diff
(98.0 %id)
AW815137 stomach .i 1 to 685 17 to 702 K53* tiling clone,   686/702
(97 %)
12 diff
(98.3 %id)
DA655832   .j 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
BF371754 prostate_normal .k 1 to 505 1 to 504 R2W Q3* tiling clone,   504/507
(99 %)
7 diff
(98.7 %id)
EF491804   .l 1 to 153 1 to 153   tiling clone,   153/153
(100 %)
0 diff
(100 %id)
EF491819   .l 127 to 240 1 to 114   tiling clone,   114/114
(100 %)
0 diff
(100 %id)
BI044420 ovary .m 1 to 208 212 to 12 V34S G49A L50* tiling clone,   201/212
(94 %)
3 diff
(98.6 %id)
AA610060   .n-u 1 to 148 148 to 1   tiling clone,   148/148
(100 %)
0 diff
(100 %id)
DB235633 trachea .n-u 84 to 657 2 to 577   tiling clone, capped   576/576
(100 %)
2 diff
(99.7 %id)
CB269862 adipose .n-u 337 to 933 1 to 597   tiling clone,   597/597
(100 %)
0 diff
(100 %id)
AI393222 B-cell, chronic lymphotic leukemia .o 1 to 425 1 to 425 exact tiling clone, Submitted on the opposite strand 425/425
(100 %)
0 diff
(100 %id)
AW051626 Kidney .p-u 1 to 367 366 to 1 N2T tiling clone,   366/366
(100 %)
6 diff
(98.4 %id)
BE063828 breast .q-u 1 to 361 372 to -1 exact tiling clone, Submitted on the opposite strand 370/377
(98 %)
0 diff
(100 %id)
BE063857 breast .q-u 26 to 365 1 to 341   tiling clone,   341/356
(95 %)
7 diff
(98.1 %id)
BF368250 placenta_normal .r 1 to 275 1 to 273 I33V tiling clone,   273/273
(100 %)
14 diff
(94.9 %id)
AV750642 Pituitary Gene WDFY3, variant not shown         Suspected internal deletion, this clone was ignored    
BF735631 amnion_normal Gene WDFY3, variant not shown         Suspected internal deletion, this clone was ignored    
AK055806 Kidney Gene WDFY3, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DB369206.
matches multiple genes
  Gene WDFY3, variant not shown         This clone was ignored, also hits gene voysnaby    
DB369206.
matches multiple genes
  Gene voysnaby, variant not shown         This clone was ignored, also hits gene voysnaby    
DA736675.
matches multiple genes
  Gene WDFY3, variant not shown       capped This clone was ignored, also hits gene voysnaby    
DA736675.
matches multiple genes
  Gene voysnaby, variant not shown       capped This clone was ignored, also hits gene voysnaby    
BG204111   Gene WDFY3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DB041692 testis Gene WDFY3, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p-u, .q-u, .r Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C