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Gene VPS18TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
220 supporting clones for gene VPS18 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM740547 Ascites, stomach .a 1 to 555 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BM757296 Ascites, stomach .a 1 to 556 1 to 555       555/555
(100 %)
3 diff
(99.5 %id)
BM756088 Ascites, stomach .a 1 to 294 1 to 293   tiling clone,   293/293
(100 %)
1 diff
(99.7 %id)
AL713725 melanoma (MeWo cell line) .a 2 to 3895 1 to 3893 exact tiling clone, available from DKFZ, AAA   3893/3893
(100 %)
1 diff
(100.0 %id)
NM_020857.2   .a 2 to 3895 1 to 3894 exact RefSeq, AAA   3894/3894
(100 %)
0 diff
(100 %id)
BM737909 Ascites, stomach .a 18 to 490 1 to 472       472/472
(100 %)
4 diff
(99.2 %id)
DB454752 testis .a 22 to 500 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BP244364 Kidney .a 22 to 613 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
CX162996 human embryonic stem cells differentiated toan early endodermal cell type .a 26 to 782 1 to 757       757/757
(100 %)
0 diff
(100 %id)
AB040908   .a 27 to 3895 1 to 3869 exact tiling clone, available from KIAA,   3869/3869
(100 %)
0 diff
(100 %id)
AF308802   .a 27 to 3895 1 to 3869 exact AAA   3869/3869
(100 %)
0 diff
(100 %id)
DB496264 hypothalamus .a 29 to 422 1 to 394       394/394
(100 %)
10 diff
(97.5 %id)
DB489462 hypothalamus .a 38 to 506 1 to 468       468/468
(100 %)
5 diff
(99.0 %id)
DB495649 hypothalamus .a 38 to 535 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
BM543154 embryonal carcinoma, cell line, testis .a 39 to 857 41 to 876       836/1245
(67 %)
39 diff
(96.9 %id)
DN999610   .a 45 to 573 8 to 536       529/546
(96 %)
8 diff
(98.6 %id)
BU172589 melanotic melanoma, skin .a 49 to 738 13 to 712       700/897
(78 %)
44 diff
(95.1 %id)
AL524858 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 57 to 1084 1 to 1018       1018/1042
(97 %)
15 diff
(98.6 %id)
AL530035 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 57 to 874 1 to 819       819/819
(100 %)
1 diff
(99.9 %id)
CN431103 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 64 to 759 1 to 697       697/697
(100 %)
2 diff
(99.8 %id)
DN999857   .a 73 to 719 7 to 653       647/653
(99 %)
9 diff
(98.7 %id)
BQ309186 breast .a 102 to 310 18 to 227       210/227
(92 %)
6 diff
(97.4 %id)
BQ641514 eye, normal pigmented retinal epithelium .a 106 to 1036 1 to 941       941/945
(99 %)
37 diff
(96.1 %id)
TI_57200378   .a 113 to 721 32 to 641       610/645
(94 %)
8 diff
(98.8 %id)
BI822456 pooled brain, lung, testis .a 114 to 721 1 to 609       609/613
(99 %)
6 diff
(99.1 %id)
CN431101 embryonic stem cells, cell lines H1, H7, andH9 .a 134 to 871 1 to 738       738/738
(100 %)
1 diff
(99.9 %id)
BQ718229 sympathetic trunk .a 139 to 951 1 to 819       819/877
(93 %)
16 diff
(98.2 %id)
AW245563 lung, small cell carcinoma .a 172 to 385 7 to 220       214/220
(97 %)
6 diff
(97.3 %id)
BM194124 leukopheresis .a 187 to 759 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BM147344 leukopheresis .a 187 to 719 1 to 533       533/533
(100 %)
3 diff
(99.5 %id)
BM147591 leukopheresis .a 187 to 739 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BM148963 leukopheresis .a 187 to 644 1 to 458       458/460
(99 %)
7 diff
(98.5 %id)
BM146603 leukopheresis .a 187 to 573 1 to 387       387/442
(87 %)
8 diff
(98.2 %id)
BM146735 leukopheresis .a 187 to 664 1 to 477       477/477
(100 %)
11 diff
(97.7 %id)
BM149853 leukopheresis .a 187 to 540 1 to 354       354/384
(92 %)
16 diff
(95.9 %id)
BE244230 leukopheresis .a 187 to 736 1 to 548       548/548
(100 %)
6 diff
(99.0 %id)
BM151764 leukopheresis .a 187 to 708 1 to 522       522/522
(100 %)
5 diff
(99.1 %id)
BM151999 leukopheresis .a 187 to 659 1 to 472       472/473
(99 %)
13 diff
(97.3 %id)
BE243818 leukopheresis .a 187 to 740 1 to 553       553/553
(100 %)
6 diff
(99.0 %id)
BE246938 leukopheresis .a 187 to 536 1 to 350       350/350
(100 %)
2 diff
(99.5 %id)
BM152708 leukopheresis .a 187 to 573 1 to 387       387/409
(94 %)
2 diff
(99.6 %id)
CN431099 embryonic stem cells, DMSO-treated H9 cellline .a 212 to 934 5 to 727       723/727
(99 %)
10 diff
(98.7 %id)
BU500336   .a 321 to 1208 3 to 892       890/931
(95 %)
14 diff
(98.5 %id)
BG337158 leiomyosarcoma cell line, uterus .a 335 to 857 1 to 532       532/1016
(52 %)
16 diff
(98.5 %id)
CV027537 mixed .a 341 to 1005 1 to 662       662/666
(99 %)
5 diff
(99.3 %id)
BQ334684 marrow .a 431 to 641 172 to 382       211/382
(55 %)
6 diff
(98.5 %id)
BF981809 duodenal adenocarcinoma, cell line, small intestine .a 462 to 1222 1 to 746       746/924
(80 %)
25 diff
(97.3 %id)
CD579866 brain .a 549 to 1341 1 to 787       787/858
(91 %)
22 diff
(97.5 %id)
BG392258 embryonal carcinoma, cell line, testis .a 555 to 1333 1 to 769       769/779
(98 %)
22 diff
(97.2 %id)
BI489801 pooled brain, lung, testis .a 709 to 1556 1 to 856       856/857
(99 %)
11 diff
(98.8 %id)
TI_43960379   .a 709 to 1556 68 to 923       856/924
(92 %)
11 diff
(98.9 %id)
BX389460 Neuroblastoma Cot 50-normalized .a 761 to 1642 1 to 892       892/892
(100 %)
26 diff
(97.1 %id)
BQ636449 eye, retina .a 860 to 1421 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
CD635830   .a 892 to 1559 683 to 16       668/683
(97 %)
0 diff
(100 %id)
CD635831   .a 892 to 1559 1 to 668       668/684
(97 %)
1 diff
(99.9 %id)
CO245959 Chondrosarcoma Lung Metastasis cell lines, lung .a 1017 to 1745 8 to 727       720/838
(85 %)
6 diff
(99.3 %id)
BU849674 ovary, teratocarcinoma, cell line .a 1049 to 1823 1 to 780       780/844
(92 %)
9 diff
(99.0 %id)
BU855734 ovary, teratocarcinoma, cell line .a 1049 to 1402 1 to 355       355/896
(39 %)
8 diff
(99.2 %id)
TI_154195243   .a 1054 to 2071 49 to 1062       1014/1099
(92 %)
19 diff
(98.3 %id)
BU173588 melanotic melanoma, cell line, skin .a 1097 to 1697 1 to 607       607/1014
(59 %)
15 diff
(98.6 %id)
BU190312 melanotic melanoma, cell line, skin .a 1097 to 1625 1 to 530       530/993
(53 %)
12 diff
(98.8 %id)
BU149907 melanotic melanoma, cell line, skin .a 1097 to 1526 1 to 432       432/1115
(38 %)
12 diff
(99.0 %id)
BQ683308 melanotic melanoma, cell line, skin .a 1097 to 1362 1 to 270       270/962
(28 %)
3 diff
(99.7 %id)
BQ680857 melanotic melanoma, cell line, skin .a 1097 to 1669 1 to 573       573/912
(62 %)
15 diff
(98.4 %id)
BQ682796 melanotic melanoma, cell line, skin .a 1097 to 1626 1 to 540       540/1027
(52 %)
20 diff
(98.1 %id)
BI115967 lung, small cell carcinoma .a 1101 to 1930 1 to 822       822/833
(98 %)
31 diff
(96.3 %id)
BE893695 melanotic melanoma, skin .a 1140 to 1825 1 to 694       694/709
(97 %)
21 diff
(97.1 %id)
CD244515 testis .a 1215 to 1971 1 to 761       761/822
(92 %)
6 diff
(99.3 %id)
BF360458 marrow .a 1263 to 1514 1 to 254       254/263
(96 %)
12 diff
(95.5 %id)
BQ292376 amnion_normal .a 1531 to 1908 378 to 8       371/385
(96 %)
0 diff
(100 %id)
BQ676815 melanotic melanoma, cell line, skin .a 1560 to 2189 18 to 653       636/959
(66 %)
29 diff
(97.0 %id)
BU179485 melanotic melanoma, cell line, skin .a 1565 to 2361 1 to 810       810/897
(90 %)
27 diff
(97.0 %id)
BU174840 melanotic melanoma, cell line, skin .a 1565 to 2275 1 to 712       712/971
(73 %)
10 diff
(99.0 %id)
BQ676856 melanotic melanoma, cell line, skin .a 1565 to 2182 1 to 622       622/1038
(59 %)
12 diff
(98.9 %id)
BQ681594 melanotic melanoma, cell line, skin .a 1565 to 2204 1 to 649       649/984
(65 %)
20 diff
(98.0 %id)
AA083024   .a 1630 to 2089 1 to 464       464/553
(83 %)
12 diff
(97.9 %id)
CD673273 eye, Iris .a 1652 to 2224 1 to 573       573/573
(100 %)
15 diff
(97.4 %id)
BU190317 epithelioid carcinoma, Pancreas .a 1704 to 2534 1 to 835       835/852
(98 %)
9 diff
(99.0 %id)
BQ056289 lymph, lymphoma, cell line .a 1776 to 2535 1 to 763       763/1019
(74 %)
8 diff
(99.3 %id)
BQ057055 lymph, lymphoma, cell line .a 1776 to 2518 1 to 747       747/922
(81 %)
15 diff
(98.4 %id)
BQ057408 lymph, lymphoma, cell line .a 1776 to 2664 1 to 899       899/1037
(86 %)
20 diff
(98.1 %id)
BQ057803 lymph, lymphoma, cell line .a 1776 to 2667 1 to 897       897/1007
(89 %)
16 diff
(98.5 %id)
BQ058274 lymph, lymphoma, cell line .a 1776 to 2773 1 to 1011       1011/1012
(99 %)
20 diff
(98.1 %id)
BQ058903 lymph, lymphoma, cell line .a 1776 to 2773 1 to 1003       1003/1008
(99 %)
19 diff
(98.2 %id)
BQ061160 lymph, lymphoma, cell line .a 1776 to 2689 1 to 921       921/983
(93 %)
11 diff
(98.9 %id)
BQ062095 lymph, lymphoma, cell line .a 1776 to 2688 1 to 917       917/988
(92 %)
5 diff
(99.5 %id)
BQ063896 lymph, lymphoma, cell line .a 1776 to 2535 1 to 763       763/1066
(71 %)
13 diff
(98.8 %id)
BQ065866 lymph, lymphoma, cell line .a 1776 to 2672 1 to 905       905/1038
(87 %)
35 diff
(96.7 %id)
AW246997 lung, small cell carcinoma .a 1797 to 2020 10 to 233       224/233
(96 %)
6 diff
(97.5 %id)
AA376390 lung .a 1800 to 1977 1 to 179       179/179
(100 %)
1 diff
(99.5 %id)
AW956323   .a 1801 to 2400 1 to 599       599/599
(100 %)
8 diff
(98.7 %id)
AI928969 brain, frontal lobe .a 1866 to 2203 1 to 338       338/338
(100 %)
0 diff
(100 %id)
BU152822 large cell carcinoma, lung .a 1869 to 2538 12 to 687       676/986
(68 %)
6 diff
(99.4 %id)
BE740361 adenocarcinoma cell line, ovary .a 1878 to 2633 1 to 759       759/1102
(68 %)
7 diff
(99.4 %id)
BE746001 adenocarcinoma cell line, ovary .a 1879 to 2690 1 to 810       810/1096
(73 %)
34 diff
(96.9 %id)
BG758603 B-cells, primary B-cells from tonsils (cell line) .a 1898 to 2617 1 to 720       720/720
(100 %)
1 diff
(99.9 %id)
BQ650023 hepatocellular carcinoma, cell line, Liver .a 1983 to 2773 90 to 899       810/1039
(77 %)
39 diff
(96.3 %id)
BU155386 adenocarcinoma, Pancreas .a 1989 to 2503 98 to 616       519/1107
(46 %)
6 diff
(99.5 %id)
BG109300 Bone, osteosarcoma, cell line .a 2000 to 2757 1 to 756       756/860
(87 %)
22 diff
(97.5 %id)
AW860516 colon .a 2005 to 2247 245 to 4       242/256
(94 %)
0 diff
(100 %id)
BG912666 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2047 to 2807 12 to 774       763/774
(98 %)
13 diff
(98.4 %id)
BM699277 eye, fetal eyes .a 2151 to 2743 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BU175261 large cell carcinoma, lung .a 2283 to 3163 1 to 889       889/909
(97 %)
33 diff
(96.4 %id)
BM544403 brain, hippocampus .a 2310 to 3033 13 to 738       726/1085
(66 %)
12 diff
(98.9 %id)
AA027134 uterus .a 2336 to 2526 1 to 189       189/193
(97 %)
6 diff
(96.9 %id)
BI756909 brain .a 2356 to 3208 1 to 851       851/865
(98 %)
39 diff
(95.5 %id)
TI_57220161   .a 2356 to 3208 77 to 927       851/941
(90 %)
43 diff
(95.5 %id)
BE743011 adenocarcinoma cell line, ovary .a 2357 to 2421 515 to 581       511/581
(87 %)
25 diff
(95.7 %id)
BG258597 embryonal carcinoma, cell line, testis .a 2470 to 3252 1 to 776       776/819
(94 %)
20 diff
(97.6 %id)
BI755181 brain .a 2501 to 3226 1 to 739       739/740
(99 %)
37 diff
(95.0 %id)
TI_57215701   .a 2503 to 3226 35 to 771       737/772
(95 %)
40 diff
(94.9 %id)
BG760944 melanotic melanoma, high MDR (cell line), skin .a 2547 to 3326 1 to 788       788/788
(100 %)
20 diff
(97.5 %id)
H51157 brain .a 2603 to 2940 1 to 338       338/338
(100 %)
6 diff
(98.3 %id)
CD674936 eye, lens .a 2628 to 2973 1 to 346       346/346
(100 %)
1 diff
(99.8 %id)
CN431100 embryonic stem cells, DMSO-treated H9 cellline .a 2630 to 3036 1 to 407       407/409
(99 %)
4 diff
(99.1 %id)
CN431102 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2641 to 3249 13 to 621       609/621
(98 %)
6 diff
(99.1 %id)
CA487573   .a 2642 to 3486 1 to 847       847/881
(96 %)
10 diff
(98.9 %id)
BE799960 lung, small cell carcinoma .a 2686 to 3544 26 to 890       865/1047
(82 %)
29 diff
(97.3 %id)
BE792062 lung, small cell carcinoma .a 2706 to 3504 1 to 795       795/805
(98 %)
15 diff
(98.2 %id)
CK905184 insulinoma, Pancreas .a 2740 to 3155 3 to 418   fully sequenced,   416/418
(99 %)
5 diff
(98.9 %id)
BM314059 insulinoma, Pancreas .a 2745 to 3261 8 to 524       517/524
(98 %)
6 diff
(98.9 %id)
CN431105 embryonic stem cells, DMSO-treated H9 cellline .a 2776 to 3311 1 to 536       536/536
(100 %)
0 diff
(100 %id)
BM042243 melanotic melanoma, cell line, skin .a 2804 to 3424 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
AL524857 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 2816 to 3873 1055 to 1       1055/1084
(97 %)
20 diff
(98.2 %id)
BM708747 eye, RPE and Choroid .a 2816 to 3280 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
BX375356 Neuroblastoma Cot 25-normalized .a 2886 to 3843 967 to 10       958/1036
(92 %)
0 diff
(100 %id)
BM153429 leukopheresis .a 2888 to 3598 711 to 1       711/713
(99 %)
4 diff
(99.5 %id)
CN431104 embryonic stem cells, DMSO-treated H9 cellline .a 2901 to 3228 6 to 333       328/333
(98 %)
6 diff
(98.2 %id)
BM313785 insulinoma, Pancreas .a 2940 to 3595 657 to 1       657/658
(99 %)
2 diff
(99.7 %id)
TI_159722232   .a 2966 to 3895 977 to 60   AAA   918/1028
(89 %)
23 diff
(97.8 %id)
CB850592 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2967 to 3705 1 to 737     Submitted on the opposite strand 737/737
(100 %)
6 diff
(99.2 %id)
CB851827 Human Lung Epithelial cells, lung .a 2967 to 3705 1 to 738     Submitted on the opposite strand 738/738
(100 %)
8 diff
(99.0 %id)
TI_149297019   .a 2973 to 3850 48 to 919     Submitted on the opposite strand 872/1037
(84 %)
13 diff
(98.8 %id)
TI_159714940   .a 2973 to 3865 62 to 948     Submitted on the opposite strand 887/1129
(78 %)
20 diff
(98.3 %id)
BM151536 leukopheresis .a 2980 to 3598 618 to 1       618/619
(99 %)
6 diff
(99.1 %id)
BE047667 brain, tumor, 5 pooled (see description) .a 2982 to 3270 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
AL530034 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 2998 to 3879 879 to 1       879/879
(100 %)
4 diff
(99.6 %id)
TI_159723023   .a 3000 to 3895 962 to 76   AAA   887/1000
(88 %)
14 diff
(98.6 %id)
BI519750 leukocyte .a 3023 to 3817 835 to 2       834/835
(99 %)
0 diff
(100 %id)
TI_44459822   .a 3023 to 3817 835 to 2       834/835
(99 %)
0 diff
(100 %id)
BM145599 leukopheresis .a 3026 to 3598 573 to 1       573/573
(100 %)
3 diff
(99.5 %id)
BU957043 adenocarcinoma, cell line, breast .a 3027 to 3718 1 to 701       701/854
(82 %)
18 diff
(97.9 %id)
TI_154135134   .a 3040 to 3895 933 to 81   AAA   853/998
(85 %)
12 diff
(98.8 %id)
TI_159716855   .a 3075 to 3895 865 to 53   AAA   813/997
(81 %)
10 diff
(99.0 %id)
CB853629 Human Lung Epithelial cells, lung .a 3113 to 3895 800 to 19   AAA   782/784
(99 %)
5 diff
(99.4 %id)
CK905183 insulinoma, Pancreas .a 3125 to 3595 471 to 1   fully sequenced,   471/471
(100 %)
1 diff
(99.8 %id)
BE244481 leukopheresis .a 3128 to 3598 469 to 1       469/469
(100 %)
7 diff
(98.6 %id)
BM150013 leukopheresis .a 3131 to 3598 468 to 1       468/469
(99 %)
2 diff
(99.6 %id)
BM144404 leukopheresis .a 3144 to 3598 455 to 1       455/455
(100 %)
0 diff
(100 %id)
BE243580 leukopheresis .a 3144 to 3598 455 to 1       455/455
(100 %)
3 diff
(99.4 %id)
AA039249 uterus .a 3175 to 3500 1 to 329   fully sequenced,   329/329
(100 %)
1 diff
(99.7 %id)
BX117101 uterus .a 3176 to 3866 1 to 691       691/702
(98 %)
1 diff
(99.9 %id)
BX493534   .a 3182 to 3713 1 to 532       532/532
(100 %)
0 diff
(100 %id)
TI_149289901   .a 3209 to 3895 777 to 91   AAA   687/687
(100 %)
0 diff
(100 %id)
BU159902 eye, retinoblastoma .a 3212 to 3895 1 to 684   AAA   684/684
(100 %)
1 diff
(99.9 %id)
BM972971 lung .a 3230 to 3895 684 to 19   AAA   666/666
(100 %)
0 diff
(100 %id)
CB853069 Human Lung Epithelial cells, lung .a 3234 to 3895 680 to 19   AAA   662/662
(100 %)
0 diff
(100 %id)
AA476967 ovarian tumor, ovary .a 3263 to 3754 1 to 492       492/492
(100 %)
0 diff
(100 %id)
R25465 placenta .a 3266 to 3558 1 to 295   fully sequenced,   295/295
(100 %)
10 diff
(96.7 %id)
BM850684 stomach .a 3268 to 3823 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
CB852559 Human Lung Epithelial cells, lung .a 3274 to 3895 640 to 19   AAA   622/622
(100 %)
0 diff
(100 %id)
AA082935   .a 3305 to 3896 598 to 5       594/600
(99 %)
0 diff
(100 %id)
BQ018419 lung, Metastatic Chondrosarcoma .a 3305 to 3895 609 to 19   AAA   591/604
(97 %)
0 diff
(100 %id)
BM687664 eye, eye anterior segment .a 3308 to 3895 1 to 588   AAA   588/588
(100 %)
7 diff
(98.9 %id)
TI_154033601   .a 3309 to 3895 631 to 47   AAA   585/786
(74 %)
21 diff
(97.4 %id)
CA413853 Chondrosarcoma Grade II, Left Pelvis .a 3311 to 3895 603 to 19   AAA   585/585
(100 %)
0 diff
(100 %id)
BU731471 eye, RPE and Choroid .a 3312 to 3895 602 to 19   AAA   584/584
(100 %)
0 diff
(100 %id)
BM669495 eye, fetal eyes .a 3312 to 3895 602 to 19   AAA   584/584
(100 %)
0 diff
(100 %id)
CO248256 Chondrosarcoma Lung Metastasis cell lines, lung .a 3313 to 3895 1 to 583       583/828
(70 %)
6 diff
(99.3 %id)
BM144805 leukopheresis .a 3323 to 3598 276 to 1       276/285
(96 %)
8 diff
(97.2 %id)
BM151294 leukopheresis .a 3339 to 3598 260 to 1       260/260
(100 %)
5 diff
(98.1 %id)
BE221738 Kidney .a 3345 to 3896 553 to 2       552/553
(99 %)
0 diff
(100 %id)
AI700688 carcinoid, lung .a 3361 to 3896 542 to 7       536/542
(98 %)
0 diff
(100 %id)
BM144748 leukopheresis .a 3376 to 3598 222 to 1       222/243
(91 %)
16 diff
(93.5 %id)
AW205645   .a 3386 to 3895 527 to 18   AAA   510/510
(100 %)
4 diff
(99.3 %id)
H51119 brain .a 3389 to 3864 480 to 1       480/484
(99 %)
17 diff
(96.5 %id)
BP391336 pancreatic islet .a 3396 to 3895 1 to 500     Submitted on the opposite strand 500/500
(100 %)
0 diff
(100 %id)
AI560899 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3407 to 3896 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AI559546 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3407 to 3896 494 to 5       490/494
(99 %)
0 diff
(100 %id)
AI744266 ovary, tumor, 5 pooled (see description) .a 3411 to 3896 493 to 8       486/493
(98 %)
0 diff
(100 %id)
AI612819 ovary, tumor, 5 pooled (see description) .a 3411 to 3896 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
AI636084 Kidney .a 3411 to 3891 488 to 8       481/488
(98 %)
0 diff
(100 %id)
AI924943 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3411 to 3896 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AI654088 Kidney .a 3414 to 3895 506 to 24   AAA   483/484
(99 %)
13 diff
(97.4 %id)
DB566709 hypothalamus .a 3434 to 3895 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
DB567286 hypothalamus .a 3436 to 3893 1 to 458     Submitted on the opposite strand 458/460
(99 %)
1 diff
(99.8 %id)
DB558990 hypothalamus .a 3450 to 3895 1 to 446     Submitted on the opposite strand 446/446
(100 %)
1 diff
(99.8 %id)
AI073689 senescent fibroblast .a 3455 to 3895 451 to 13   AAA   439/439
(100 %)
2 diff
(99.6 %id)
AI929220 brain, frontal lobe .a 3458 to 3896 445 to 7       439/445
(98 %)
0 diff
(100 %id)
AW167980 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3458 to 3896 443 to 5       439/443
(99 %)
0 diff
(100 %id)
BE836292 prostate_normal .a 3460 to 3582 138 to 18       121/138
(87 %)
0 diff
(100 %id)
AA037759 uterus .a 3470 to 3895 442 to 15   fully sequenced, AAA   428/428
(100 %)
1 diff
(99.8 %id)
AI587540 adenocarcinoma, Pancreas .a 3474 to 3895 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AA707703 pineal gland .a 3479 to 3896 418 to 3       416/418
(99 %)
0 diff
(100 %id)
BE247661 leukopheresis .a 3488 to 3598 110 to 1       110/120
(91 %)
2 diff
(98.4 %id)
AA779135 liver and spleen .a 3492 to 3895 406 to 1       406/406
(100 %)
1 diff
(99.8 %id)
AW250200 lung, small cell carcinoma .a 3492 to 3895 414 to 11   AAA   404/404
(100 %)
0 diff
(100 %id)
AI473988 colon, moderately-differentiated adenocarcinoma .a 3496 to 3895 412 to 13   AAA   400/400
(100 %)
1 diff
(99.8 %id)
DW411383 Liver .a 3501 to 3813 17 to 329       313/329
(95 %)
6 diff
(98.2 %id)
DW430789 Liver .a 3501 to 3755 17 to 271       255/271
(94 %)
6 diff
(97.8 %id)
DW450957 Liver .a 3501 to 3679 17 to 195       179/195
(91 %)
6 diff
(97.0 %id)
AI858547 anaplastic oligodendroglioma, brain .a 3503 to 3895 393 to 1       393/393
(100 %)
1 diff
(99.8 %id)
AA420503   .a 3509 to 3895 404 to 18   AAA   387/400
(96 %)
12 diff
(97.0 %id)
AA420504   .a 3510 to 3895 1 to 382   AAA   382/382
(100 %)
7 diff
(98.2 %id)
AI524823 Kidney .a 3511 to 3895 400 to 16   AAA   385/385
(100 %)
1 diff
(99.8 %id)
R26290 placenta .a 3517 to 3895 393 to 1   fully sequenced,   393/393
(100 %)
16 diff
(96.0 %id)
AW770761 carcinoid, lung .a 3517 to 3895 400 to 22   AAA   379/379
(100 %)
8 diff
(97.9 %id)
AI200098 lung .a 3549 to 3895 347 to 1       347/347
(100 %)
0 diff
(100 %id)
AI863323 brain, tumor, 5 pooled (see description) .a 3554 to 3895 342 to 1       342/342
(100 %)
0 diff
(100 %id)
AI216310 pooled .a 3563 to 3896 341 to 8       334/341
(97 %)
0 diff
(100 %id)
AW511689 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3564 to 3896 333 to 1       333/333
(100 %)
0 diff
(100 %id)
BM987207 mixed .a 3564 to 3895 350 to 19   AAA   332/332
(100 %)
0 diff
(100 %id)
AA879408 pooled .a 3577 to 3895 330 to 12   AAA   319/319
(100 %)
0 diff
(100 %id)
AI354890 lung .a 3578 to 3895 318 to 1       318/318
(100 %)
2 diff
(99.4 %id)
AW188900 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3594 to 3895 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AA580398 colon, colon tumor .a 3601 to 3896 305 to 8       298/305
(97 %)
0 diff
(100 %id)
AI696006 pooled germ cell tumors .a 3606 to 3895 290 to 1       290/290
(100 %)
2 diff
(99.4 %id)
AI915111 colon, colon tumor, RER+ .a 3650 to 3894 245 to 1       245/245
(100 %)
0 diff
(100 %id)
AW772374 Kidney .a 3651 to 3891 245 to 5       241/245
(98 %)
0 diff
(100 %id)
AW250149 lung, small cell carcinoma .a 3676 to 3895 10 to 229   AAA   220/229
(96 %)
6 diff
(97.4 %id)
EC578696 Prostate .a 3687 to 3788 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
BF590716 colon, colon tumor, RER+ .a 3786 to 3894 109 to 1       109/157
(69 %)
0 diff
(100 %id)
BM556906 melanotic melanoma, skin .b 1 to 992 1 to 1009 exact tiling clone,   1009/1088
(92 %)
17 diff
(98.5 %id)
BI518666 leukocyte .c 1 to 870 1 to 868 exact tiling clone,   868/871
(99 %)
17 diff
(98.1 %id)
TI_44459820   .c 1 to 870 30 to 897 exact     868/900
(96 %)
22 diff
(97.6 %id)
AW173042 pooled .d-u 1 to 530 531 to 2 S85Y tiling clone,   530/531
(99 %)
0 diff
(100 %id)
AI479337 pooled .d-u 34 to 530 498 to 2   tiling clone,   497/498
(99 %)
0 diff
(100 %id)
BC001513 Lung, small cell carcinoma Gene VPS18, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
W45565 senescent fibroblast Gene VPS18, variant not shown         Suspected internal deletion, this clone was ignored    
W45618 senescent fibroblast Gene VPS18, variant not shown         Suspected internal deletion, this clone was ignored    
AI352173   Gene VPS18, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BF591088 colon, colon tumor, RER+ Gene VPS18, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI