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Gene VGLL2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
29 supporting clones for gene VGLL2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AJ578053   .a 1 to 2212 1 to 2212 exact tiling clone,   2212/2212
(100 %)
0 diff
(100 %id)
NM_182645.2   .a 1 to 2212 1 to 2212 exact RefSeq,   2212/2212
(100 %)
0 diff
(100 %id)
AK096878 skeletal muscle .a 168 to 1319 1 to 1152 exact available from FLJ,   1152/1161
(99 %)
4 diff
(99.7 %id)
DA893569 skeletal muscle .a 169 to 642 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
AY056583   .b 1 to 1709 1 to 1709 exact tiling clone,   1709/1709
(100 %)
0 diff
(100 %id)
NM_153453.1   .b 1 to 1709 1 to 1709 exact RefSeq,   1709/1709
(100 %)
0 diff
(100 %id)
BC100798 PCR rescued clones .b 34 to 1141 1 to 1108 exact     1108/1108
(100 %)
0 diff
(100 %id)
BC100799 PCR rescued clones .b 34 to 1141 1 to 1108 exact     1108/1108
(100 %)
0 diff
(100 %id)
BC118622 PCR rescued clones .b 34 to 1141 1 to 1108 exact     1108/1108
(100 %)
0 diff
(100 %id)
BC118545 PCR rescued clones .b 34 to 1141 1 to 1108 exact     1108/1108
(100 %)
0 diff
(100 %id)
BC069316 PCR rescued clones .b 124 to 716 1 to 593 exact available from MGC,   593/593
(100 %)
0 diff
(100 %id)
TI_1948227369   .b 206 to 647 129 to 570 K121*     442/701
(63 %)
15 diff
(97.9 %id)
TI_1948227656   .b 206 to 644 123 to 561 L141H     439/1315
(33 %)
12 diff
(99.1 %id)
TI_1948227657   .b 206 to 644 145 to 583 exact     439/630
(69 %)
12 diff
(98.1 %id)
TI_1948227960   .b 206 to 644 130 to 568 exact     439/654
(67 %)
11 diff
(98.4 %id)
TI_1948228245   .b 206 to 644 128 to 565 L4R D5M V6L M7C Y8T ...     438/579
(75 %)
11 diff
(98.2 %id)
EL736216 mixed .b 207 to 644 1 to 438 exact     438/585
(74 %)
5 diff
(99.2 %id)
BX500052 Liver .b 760 to 1032 1 to 272       272/272
(100 %)
1 diff
(99.7 %id)
AA453919   .b 815 to 1012 9 to 206       198/206
(96 %)
6 diff
(97.1 %id)
AI292308 placenta .b 1263 to 1709 455 to 9       447/455
(98 %)
0 diff
(100 %id)
AI004234   .b 1268 to 1708 455 to 15   AAA   441/441
(100 %)
0 diff
(100 %id)
AI276196 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1284 to 1708 451 to 27   AAA   425/425
(100 %)
11 diff
(97.5 %id)
F32027 pectoral muscle (after mastectomy) .b 1317 to 1525 1 to 209       209/209
(100 %)
8 diff
(96.2 %id)
AA453413   .b 1326 to 1709 387 to 4       384/387
(99 %)
0 diff
(100 %id)
F37053 pectoral muscle (after mastectomy) .b 1326 to 1692 1 to 367       367/367
(100 %)
0 diff
(100 %id)
F28435 pectoral muscle (after mastectomy) .b 1337 to 1705 4 to 372   AAA   369/372
(99 %)
9 diff
(97.6 %id)
AI077557   .b 1338 to 1709 376 to 5       372/376
(98 %)
0 diff
(100 %id)
AI419661 brain, glioblastoma (pooled) .b 1364 to 1702 345 to 7       339/345
(98 %)
0 diff
(100 %id)
AI382386   .b 1480 to 1709 236 to 7       230/236
(97 %)
0 diff
(100 %id)
AI039121   Gene VGLL2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI