cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
BC006336 | Uterus, leiomyosarcoma | .a | 26 to 1143 | 1 to 1118 | exact | tiling clone, available from MGC, AAA | 1118/1118 (100 %) | 1 diff (100.0 %id) | |
BG601065 | tonsils | .a | 303 to 750 | 1 to 448 | 448/448 (100 %) | 0 diff (100 %id) | |||
BT007035 | .a | 33 to 904 | 1 to 872 | 872/873 (99 %) | 1 diff (99.9 %id) | ||||
CR735344 | melanotic melanoma, high MDR, skin | .a | 18 to 514 | 1 to 497 | 497/497 (100 %) | 5 diff (99.0 %id) | |||
BQ637322 | eye, retina | .a | 5 to 394 | 1 to 390 | 390/390 (100 %) | 2 diff (99.5 %id) | |||
H92142 | eye, retina | .c | 1 to 358 | 1 to 359 | L4X R27X L50X | tiling clone, | 359/364 (98 %) | 6 diff (98.4 %id) | |
H92143 | eye, retina | .c | 585 to 875 | 294 to 1 | tiling clone, | 294/294 (100 %) | 5 diff (98.3 %id) | ||
AW149666 | brain, medulloblastoma | .a | 746 to 1141 | 397 to 3 | 395/399 (98 %) | 0 diff (100 %id) | |||
BF037978 | adenocarcinoma, ovary | .a | 122 to 819 | 1 to 682 | 682/683 (99 %) | 22 diff (96.8 %id) | |||
BF685044 | leiomyosarcoma cell line, uterus | .b | 1 to 892 | 1 to 868 | N146V Q147K P148V Q149W S150F ... | tiling clone, | 868/1037 (83 %) | 57 diff (94.6 %id) | |
BQ957193 | large cell carcinoma, lung | .a | 17 to 932 | 28 to 952 | G2R D3H R89L E90* | 925/963 (96 %) | 43 diff (95.6 %id) | ||
NM_012476.2 | .a | 1 to 1144 | 1 to 1144 | exact | RefSeq, AAA | 1144/1144 (100 %) | 0 diff (100 %id) | ||
BM710832 | eye, fetal eyes | .a | 133 to 547 | 1 to 415 | 415/415 (100 %) | 0 diff (100 %id) | |||
Y17791 | .a | 1 to 1144 | 1 to 1145 | exact | tiling clone, AAA | 1145/1145 (100 %) | 1 diff (100.0 %id) | ||
BQ637065 | eye, retina | .a | 122 to 819 | 1 to 682 | This clone was ignored | 682/683 (99 %) | 22 diff (96.8 %id) | ||
BF685044 | leiomyosarcoma cell line, uterus | .b | 1 to 892 | 1 to 868 | N146V Q147K P148V Q149W S150F ... | tiling clone, | 868/1037 (83 %) | 57 diff (94.6 %id) | |
BF685044 | leiomyosarcoma cell line, uterus | .b | 1 to 892 | 1 to 868 | N146V Q147K P148V Q149W S150F ... | tiling clone, | 868/1037 (83 %) | 57 diff (94.6 %id) | |
BQ957193 | large cell carcinoma, lung | .a | 17 to 932 | 28 to 952 | G2R D3H R89L E90* | 925/963 (96 %) | 43 diff (95.6 %id) | ||
BQ957193 | large cell carcinoma, lung | .a | 17 to 932 | 28 to 952 | G2R D3H R89L E90* | 925/963 (96 %) | 43 diff (95.6 %id) | ||
NM_012476.2 | .a | 1 to 1144 | 1 to 1144 | exact | RefSeq, AAA | 1144/1144 (100 %) | 0 diff (100 %id) | ||
BM710832 | eye, fetal eyes | .a | 133 to 547 | 1 to 415 | 415/415 (100 %) | 0 diff (100 %id) | |||
BM710832 | eye, fetal eyes | .a | 133 to 547 | 1 to 415 | 415/415 (100 %) | 0 diff (100 %id) | |||
Y17791 | .a | 1 to 1144 | 1 to 1145 | exact | tiling clone, AAA | 1145/1145 (100 %) | 1 diff (100.0 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |