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Gene USP25TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
299 supporting clones for gene USP25 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_1948233650   .a 1 to 859 128 to 985   tiling clone, AAA   858/1329
(64 %)
11 diff
(99.2 %id)
FJ763652   .a 2 to 3379 1 to 3378 E544K tiling clone,   3378/3378
(100 %)
1 diff
(100.0 %id)
BX499568 Liver .a 2316 to 3002 1 to 689       689/689
(100 %)
2 diff
(99.8 %id)
TI_1948233651   .a 2551 to 3378 954 to 123       832/1265
(65 %)
12 diff
(99.1 %id)
AF170562   .b 1 to 5216 1 to 5213 E544K tiling clone,   5213/5213
(100 %)
8 diff
(99.9 %id)
BE894693 melanotic melanoma, skin .b 331 to 856 1 to 537   available from MGC,   537/717
(74 %)
20 diff
(97.3 %id)
TI_1948129461   .b 369 to 922 128 to 680       553/1090
(50 %)
16 diff
(98.6 %id)
TI_1948129462   .b 369 to 1012 125 to 769       645/1290
(50 %)
11 diff
(99.2 %id)
TI_1948129809   .b 369 to 922 124 to 677       554/1122
(49 %)
11 diff
(99.1 %id)
TI_1948129810   .b 369 to 1153 130 to 921       792/1319
(60 %)
31 diff
(97.7 %id)
TI_1948130155   .b 369 to 972 128 to 731       604/1092
(55 %)
17 diff
(98.5 %id)
TI_1948130156   .b 369 to 1154 127 to 919       793/1328
(59 %)
19 diff
(98.6 %id)
TI_1948130498   .b 369 to 918 126 to 679       554/1161
(47 %)
20 diff
(98.3 %id)
TI_1948130499   .b 369 to 1139 128 to 897       770/1287
(59 %)
23 diff
(98.3 %id)
CV029687 mixed .b 370 to 997 1 to 628       628/628
(100 %)
2 diff
(99.7 %id)
EL736852 mixed .b 370 to 1042 1 to 673       673/673
(100 %)
1 diff
(99.9 %id)
EH321993   .b 412 to 478 1 to 66       66/66
(100 %)
2 diff
(97.0 %id)
AW996122 breast_normal .b 417 to 621 209 to 5     Submitted on the opposite strand 205/225
(91 %)
0 diff
(100 %id)
DA733796   .b 460 to 988 2 to 530   capped   529/529
(100 %)
2 diff
(99.7 %id)
AL705278 human skeletal muscle .b 473 to 1066 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DA389687 thalamus .b 532 to 1118 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA398878 thalamus .b 534 to 1109 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BQ307821 breast .b 590 to 758 1 to 169       169/169
(100 %)
6 diff
(96.5 %id)
BQ307315 breast .b 649 to 1069 428 to 7       422/428
(98 %)
4 diff
(99.1 %id)
CF138924 lymph .b 653 to 1099 8 to 454       447/454
(98 %)
6 diff
(98.7 %id)
TI_154169095   .b 653 to 1166 80 to 593       514/515
(99 %)
1 diff
(99.9 %id)
CN398943 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 713 to 1145 1 to 433       433/433
(100 %)
0 diff
(100 %id)
CB135511 Liver .b 726 to 1129 18 to 421       404/421
(95 %)
6 diff
(98.6 %id)
BQ307830 breast .b 773 to 1119 1 to 347       347/347
(100 %)
3 diff
(99.2 %id)
AA482201 germinal center B cell .b 773 to 1187 427 to 13     Submitted on the opposite strand 415/427
(97 %)
0 diff
(100 %id)
AW818137 stomach .b 907 to 1522 614 to 1       614/618
(99 %)
11 diff
(98.3 %id)
CD624980   .b 927 to 1416 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
BP348858 brain .b 931 to 1513 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
EL593883 epidermis, skin .b 995 to 1679 14 to 696       683/726
(94 %)
9 diff
(98.8 %id)
EL593889 epidermis, skin .b 995 to 1694 14 to 713       700/808
(86 %)
8 diff
(99.1 %id)
BF823142 kidney_tumor .b 1049 to 1635 589 to 4     Submitted on the opposite strand 586/589
(99 %)
7 diff
(98.9 %id)
DB134514 thymus .b 1055 to 1608 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA860075 placenta .b 1114 to 1440 2 to 328   capped   327/327
(100 %)
0 diff
(100 %id)
BP378948 uterus .b 1195 to 1776 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AA209364.
matches multiple genes
  .b 1209 to 1449 1 to 241     also hits gene NCAPH 241/262
(91 %)
0 diff
(100 %id)
BQ233796 large cell carcinoma, lung .b 1226 to 2124 1 to 912       910/1025
(88 %)
23 diff
(97.8 %id)
AW814123 stomach .b 1282 to 1412 131 to 1       131/131
(100 %)
2 diff
(98.5 %id)
CD624981   .b 1300 to 1826 528 to 1       528/528
(100 %)
2 diff
(99.7 %id)
AU124141   .b 1319 to 2151 2 to 834   capped   833/835
(99 %)
3 diff
(99.7 %id)
AA307805 colon .b 1370 to 1855 1 to 486       486/486
(100 %)
0 diff
(100 %id)
BI028198 marrow .b 1377 to 1724 16 to 363       348/363
(95 %)
7 diff
(98.1 %id)
BI024426 marrow .b 1380 to 1772 1 to 392       392/392
(100 %)
4 diff
(99.0 %id)
BI086560 cervix .b 1451 to 2244 1 to 806       806/806
(100 %)
23 diff
(97.2 %id)
DA110943 cerebellum .b 1491 to 2081 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
BF332440 breast .b 1498 to 1843 354 to 10       353/354
(99 %)
0 diff
(100 %id)
BF332435 breast .b 1505 to 1847 343 to 1       343/343
(100 %)
0 diff
(100 %id)
DB030526 testis .b 1536 to 2070 2 to 536   capped   535/538
(99 %)
6 diff
(98.9 %id)
BP289704 lung .b 1602 to 2185 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DB119849 thymus .b 1602 to 2144 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BM150239 leukopheresis .b 1612 to 2033 1 to 422       422/422
(100 %)
8 diff
(98.2 %id)
CD624979   .b 1628 to 1827 1 to 201       201/201
(100 %)
5 diff
(97.6 %id)
CD624978   .b 1633 to 1826 194 to 1       194/199
(97 %)
0 diff
(100 %id)
BI022097 marrow .b 1635 to 2036 401 to 1       401/401
(100 %)
3 diff
(99.3 %id)
DA879869 Prostate .b 1641 to 2169 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
CD624976   .b 1649 to 1827 1 to 179       179/185
(96 %)
1 diff
(99.5 %id)
CD624977   .b 1649 to 1827 185 to 7       179/185
(96 %)
0 diff
(100 %id)
AA382386 testis .b 1672 to 1913 1 to 242       242/242
(100 %)
0 diff
(100 %id)
AW953911   .b 1673 to 2345 1 to 671       671/678
(98 %)
22 diff
(96.8 %id)
AA525465 prostate metastasis, liver .b 1692 to 1880 1 to 189       189/199
(94 %)
12 diff
(94.0 %id)
AU122556 mammary gland .b 1700 to 2341 2 to 642   capped   641/641
(100 %)
2 diff
(99.7 %id)
AA385363 thyroid gland .b 1746 to 2021 1 to 276       276/276
(100 %)
0 diff
(100 %id)
EC526232 Prostate .b 1760 to 1862 1 to 102       102/102
(100 %)
3 diff
(97.1 %id)
EC540757 Prostate .b 1760 to 1862 1 to 101       101/101
(100 %)
4 diff
(96.1 %id)
EC466683 Prostate .b 1762 to 1862 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BG122982 adenocarcinoma, cell line, Liver .b 1832 to 2563 1 to 736       736/863
(85 %)
18 diff
(98.0 %id)
BG390879 embryonal carcinoma, cell line, testis .b 1834 to 2500 1 to 675       675/767
(88 %)
22 diff
(97.2 %id)
CT002240 T-Lymphocytes .b 1843 to 2520 1 to 678   tiling clone,   678/678
(100 %)
0 diff
(100 %id)
BE160254 head_neck .b 1852 to 2431 580 to 2     Submitted on the opposite strand 579/584
(99 %)
0 diff
(100 %id)
CN392329 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1877 to 2269 1 to 393       393/393
(100 %)
2 diff
(99.5 %id)
AW935896 denis_drash .b 1884 to 2406 524 to 9     Submitted on the opposite strand 518/524
(98 %)
3 diff
(99.5 %id)
BF330501 breast_normal .b 1889 to 2405 40 to 559       520/559
(93 %)
18 diff
(96.8 %id)
BE160253 head_neck .b 1922 to 2440 537 to 20     Submitted on the opposite strand 518/537
(96 %)
1 diff
(99.9 %id)
AW835794 leiomios .b 1947 to 2432 18 to 503       486/503
(96 %)
9 diff
(98.3 %id)
BQ318433 colon .b 1954 to 2272 347 to 28       320/365
(87 %)
0 diff
(100 %id)
AA081200   .b 2014 to 2464 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
AW834824 leiomios .b 2025 to 2285 394 to 134       261/394
(66 %)
1 diff
(99.8 %id)
AW994396 breast_normal .b 2027 to 2668 640 to 2     Submitted on the opposite strand 639/653
(97 %)
7 diff
(99.0 %id)
BE245273 leukopheresis .b 2040 to 2326 1 to 287       287/287
(100 %)
2 diff
(99.4 %id)
FN152951 breast carcinoma .b 2043 to 2135 1 to 92       92/95
(96 %)
4 diff
(95.8 %id)
BF326701 breast_normal .b 2057 to 2562 619 to 111       509/661
(77 %)
9 diff
(98.7 %id)
DA465005   .b 2104 to 2667 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
W52737 Pancreas, pancreatic islet .b 2235 to 2707 1 to 481       481/535
(89 %)
12 diff
(97.8 %id)
AA248980   .b 2403 to 2606 1 to 203       203/203
(100 %)
7 diff
(96.6 %id)
BF934404 nervous_tumor .b 2800 to 3152 10 to 362       353/362
(97 %)
6 diff
(98.4 %id)
BM758824 myeloma .b 2848 to 3291 1 to 444       444/444
(100 %)
0 diff
(100 %id)
BX390341 Placenta Cot 25-normalized .b 2895 to 3419 1 to 524       524/872
(60 %)
21 diff
(97.6 %id)
BI027809 marrow .b 2911 to 3208 314 to 16       299/314
(95 %)
4 diff
(98.8 %id)
BG776466 lung, mucoepidermoid carcinoma .b 2955 to 3763 1 to 803       803/808
(99 %)
17 diff
(97.9 %id)
AL570599 placenta, Placenta Cot 25-normalized .b 2974 to 4021 1057 to 10       1048/1057
(99 %)
8 diff
(99.3 %id)
FN122907 breast carcinoma .b 3018 to 3122 104 to 1     Submitted on the opposite strand 104/104
(100 %)
2 diff
(98.1 %id)
BM836222 stomach .b 3020 to 3257 1 to 237       237/237
(100 %)
1 diff
(99.6 %id)
BM836013 stomach .b 3020 to 3390 1 to 370       370/370
(100 %)
1 diff
(99.8 %id)
BM836039 stomach .b 3022 to 3517 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
BM838984 stomach .b 3029 to 3425 1 to 398       398/402
(99 %)
2 diff
(99.6 %id)
Z45010 brain, total brain .b 3030 to 3348 11 to 329       319/329
(96 %)
6 diff
(98.2 %id)
AA644617 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3030 to 3399 1 to 370       370/370
(100 %)
0 diff
(100 %id)
BE177536 head_neck .b 3073 to 3560 489 to 4     Submitted on the opposite strand 486/489
(99 %)
11 diff
(97.8 %id)
T31681 colon, embryo .b 3080 to 3388 1 to 310       310/310
(100 %)
1 diff
(99.7 %id)
T31799 colon, embryo .b 3080 to 3420 1 to 341       341/347
(98 %)
1 diff
(99.8 %id)
AW965461   .b 3081 to 3667 1 to 587       587/587
(100 %)
4 diff
(99.4 %id)
BF769374 epid_tumor .b 3086 to 3526 440 to 1     Submitted on the opposite strand 440/451
(97 %)
2 diff
(99.6 %id)
BI015615 lung_tumor .b 3103 to 3275 219 to 47       173/219
(78 %)
0 diff
(100 %id)
BG254208 adenocarcinoma, cell line, Prostate .b 3120 to 3900 15 to 794       780/893
(87 %)
38 diff
(95.8 %id)
EL950034 eyeball .b 3190 to 3736 21 to 567       547/567
(96 %)
6 diff
(99.0 %id)
AA526219 ovary .b 3219 to 3707 1 to 487       487/491
(99 %)
16 diff
(96.8 %id)
FN155536 breast carcinoma .b 3222 to 3312 93 to 1     Submitted on the opposite strand 93/93
(100 %)
2 diff
(97.9 %id)
BU852371 testis .b 3239 to 4024 1 to 799       799/820
(97 %)
24 diff
(97.1 %id)
FN073433 breast carcinoma .b 3266 to 3347 1 to 81       81/88
(92 %)
2 diff
(97.8 %id)
AI672446 Kidney .b 3267 to 3785 519 to 1       519/519
(100 %)
1 diff
(99.9 %id)
AA429930   .b 3318 to 3719 1 to 402       402/402
(100 %)
1 diff
(99.8 %id)
AW665728 pooled .b 3323 to 3822 502 to 5       498/502
(99 %)
1 diff
(99.9 %id)
FN175555 breast carcinoma .b 3324 to 3425 100 to 1     Submitted on the opposite strand 100/100
(100 %)
2 diff
(98.0 %id)
BG925672 cartilage .b 3325 to 3998 87 to 760       674/691
(97 %)
7 diff
(99.0 %id)
BG928279 cartilage .b 3325 to 3992 86 to 753       668/686
(97 %)
7 diff
(99.0 %id)
TI_149310428   .b 3341 to 4065 824 to 112       713/963
(74 %)
22 diff
(97.8 %id)
AA479415 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3352 to 3720 1 to 369   fully sequenced,   369/369
(100 %)
4 diff
(99.0 %id)
BX107303 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3353 to 3983 1 to 630       630/630
(100 %)
1 diff
(99.9 %id)
AA888868   .b 3377 to 3815 446 to 6       441/446
(98 %)
1 diff
(99.8 %id)
AW183448 pooled .b 3399 to 3816 418 to 1       418/418
(100 %)
3 diff
(99.3 %id)
AA770504   .b 3409 to 3687 279 to 1       279/279
(100 %)
0 diff
(100 %id)
BQ186647 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3418 to 3761 1 to 344   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 344/344
(100 %)
0 diff
(100 %id)
AA731841 germinal center B cell .b 3419 to 3754 373 to 38   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 336/336
(100 %)
0 diff
(100 %id)
AA782002   .b 3421 to 3826 408 to 3       406/408
(99 %)
0 diff
(100 %id)
AW902294 nervous_normal .b 3462 to 3772 72 to 385       314/385
(81 %)
6 diff
(98.5 %id)
CK903452 Islets of Langerhans, Pancreas .b 3478 to 4055 583 to 6       578/583
(99 %)
0 diff
(100 %id)
BI963188 Islets of Langerhans, Pancreas .b 3481 to 4055 580 to 6       575/580
(99 %)
0 diff
(100 %id)
AU148115 mammary gland .b 3504 to 4054 550 to 1       550/550
(100 %)
8 diff
(98.6 %id)
FN162685 breast carcinoma .b 3507 to 3604 7 to 105       99/105
(94 %)
1 diff
(99.1 %id)
BU688732 lung, Primary Lung Epithelial Cells .b 3520 to 4058 563 to 25   AAA   539/545
(98 %)
0 diff
(100 %id)
AU150865   .b 3524 to 4064 539 to 1       539/543
(99 %)
9 diff
(98.4 %id)
AW890993 nervous_tumor .b 3544 to 3683 149 to 10       140/152
(92 %)
0 diff
(100 %id)
AI813576 lymph node, lymphoma, follicular mixed small and largecell .b 3553 to 4065 518 to 5       514/518
(99 %)
0 diff
(100 %id)
AA526306 ovary .b 3575 to 4064 517 to 30   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 488/488
(100 %)
19 diff
(96.2 %id)
CA444027 Fibrosarcoma .b 3588 to 4058 495 to 25   AAA   471/477
(98 %)
0 diff
(100 %id)
AI168012 senescent fibroblast .b 3607 to 4054 462 to 15   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 448/448
(100 %)
0 diff
(100 %id)
AI826205 normal prostate, Prostate .b 3625 to 4054 430 to 1       430/430
(100 %)
7 diff
(98.4 %id)
AA747586 Ewing's sarcoma .b 3630 to 4055 432 to 7       426/432
(98 %)
0 diff
(100 %id)
AW502713 lymph .b 3636 to 3956 328 to 8     Submitted on the opposite strand 321/328
(97 %)
0 diff
(100 %id)
BQ215557 embryonal carcinoma, cell line, testis .b 3638 to 4518 1 to 883   tiling clone,   883/883
(100 %)
16 diff
(98.2 %id)
AI270466 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 3643 to 4065 432 to 8       425/469
(90 %)
0 diff
(100 %id)
BG535849 lung .b 3647 to 4184 1 to 540       540/858
(62 %)
14 diff
(98.4 %id)
AI093898 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3652 to 4069 420 to 4       417/420
(99 %)
0 diff
(100 %id)
AI308246 2 pooled tumors (clear cell type), Kidney .b 3657 to 4054 427 to 30   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 398/398
(100 %)
4 diff
(99.0 %id)
AI809934 pooled .b 3666 to 4064 413 to 15   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 399/399
(100 %)
0 diff
(100 %id)
AA479313 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3690 to 4057 368 to 1   fully sequenced,   368/368
(100 %)
2 diff
(99.5 %id)
AI276958 placenta .b 3690 to 4064 394 to 20   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 375/375
(100 %)
7 diff
(98.2 %id)
AA219644 brain, neuroepithelial cells .b 3720 to 3969 252 to 1       252/363
(69 %)
6 diff
(98.4 %id)
AI151534 placenta .b 3723 to 4064 358 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 342/342
(100 %)
1 diff
(99.8 %id)
BU184491 leiomyosarcoma, uterus .b 3729 to 4069 342 to 5     Submitted on the opposite strand 338/342
(98 %)
0 diff
(100 %id)
AI985497 Kidney .b 3731 to 4064 344 to 11   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 334/334
(100 %)
0 diff
(100 %id)
FN047172 breast carcinoma .b 3734 to 3830 97 to 1     Submitted on the opposite strand 97/98
(98 %)
0 diff
(100 %id)
T19119   .b 3737 to 4064 328 to 1     Submitted on the opposite strand 328/328
(100 %)
0 diff
(100 %id)
AI540129 B-cell, chronic lymphotic leukemia .b 3740 to 4203 1 to 464     Submitted on the opposite strand 464/467
(99 %)
2 diff
(99.6 %id)
FN053241 breast carcinoma .b 3748 to 3830 84 to 1     Submitted on the opposite strand 84/87
(96 %)
1 diff
(98.9 %id)
H01557 placenta .b 3774 to 4175 1 to 407       407/407
(100 %)
10 diff
(97.6 %id)
AI538808 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 3796 to 4054 269 to 11   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 259/259
(100 %)
0 diff
(100 %id)
BU428585 lymph .b 3816 to 4062 300 to 51     Submitted on the opposite strand 250/300
(83 %)
0 diff
(100 %id)
BE245245 leukopheresis .b 3851 to 4064 214 to 1       214/214
(100 %)
3 diff
(98.6 %id)
T36007 testis .b 3853 to 4054 202 to 1       202/202
(100 %)
0 diff
(100 %id)
CN392330 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 3895 to 4380 1 to 486       486/486
(100 %)
0 diff
(100 %id)
N92952 lung .b 3927 to 4069 144 to 2       143/156
(91 %)
0 diff
(100 %id)
AI919111 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 3938 to 4188 1 to 251     Submitted on the opposite strand 251/251
(100 %)
0 diff
(100 %id)
GD157389   .b 3970 to 4059 1 to 89       89/104
(85 %)
3 diff
(97.2 %id)
FN070660 breast carcinoma .b 4002 to 4054 1 to 54       54/54
(100 %)
1 diff
(98.2 %id)
BQ374772 testis_normal .b 4082 to 4501 427 to 7   tiling clone,   421/427
(98 %)
0 diff
(100 %id)
AA834553 germinal center B cell .b 4379 to 4870 501 to 10   tiling clone,   492/501
(98 %)
0 diff
(100 %id)
BI256537 cervical carcinoma cell line, cervix .b 4394 to 4869 1 to 475   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 475/475
(100 %)
3 diff
(99.4 %id)
AI554234 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 4404 to 4851 448 to 1       448/448
(100 %)
0 diff
(100 %id)
DA400605 thalamus .b 4405 to 4950 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AA402850 ovarian tumor, ovary .b 4424 to 4799 376 to 1       376/376
(100 %)
0 diff
(100 %id)
AA081102   .b 4449 to 4867 429 to 5       425/431
(98 %)
0 diff
(100 %id)
AW316869 brain, three pooled meningiomas .b 4459 to 4870 412 to 1       412/412
(100 %)
0 diff
(100 %id)
W59991 Pancreas, pancreatic islet .b 4534 to 4885 357 to 2       356/392
(90 %)
0 diff
(100 %id)
AI803763 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 4534 to 4870 339 to 3       337/339
(99 %)
0 diff
(100 %id)
CB243291 Human Lung Epithelial cells, lung .b 4543 to 5159 635 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 617/617
(100 %)
3 diff
(99.6 %id)
FN144012 breast carcinoma .b 4581 to 4702 118 to 1     Submitted on the opposite strand 118/118
(100 %)
5 diff
(95.8 %id)
AW264420 brain, three pooled meningiomas .b 4617 to 4866 250 to 1       250/250
(100 %)
0 diff
(100 %id)
H01462 placenta .b 4678 to 4854 177 to 1       177/177
(100 %)
0 diff
(100 %id)
BM149594 leukopheresis .b 4734 to 5230 532 to 36   tiling clone,   497/532
(93 %)
0 diff
(100 %id)
AW264255 brain, three pooled meningiomas .b 4777 to 5160 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AI283888 adenocarcinoma, colon .b 4798 to 5217 420 to 1       420/420
(100 %)
0 diff
(100 %id)
AI284337 Kidney .b 4799 to 5160 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AA834928   .b 4831 to 5222 394 to 3   tiling clone,   392/394
(99 %)
0 diff
(100 %id)
Z40738 brain, total brain .b 4989 to 5215 227 to 1       227/227
(100 %)
0 diff
(100 %id)
FN135084 breast carcinoma .b 5127 to 5214 1 to 87       87/96
(90 %)
4 diff
(95.9 %id)
CB988914 Human Placenta, placenta .c 1 to 601 24 to 630   tiling clone,   607/850
(71 %)
30 diff
(96.5 %id)
DN993413 brain, whole brain .c 3 to 719 1 to 716       716/716
(100 %)
8 diff
(98.9 %id)
BC075792 Placenta, normal .c 5 to 3973 1 to 3969 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 3969/3969
(100 %)
1 diff
(100.0 %id)
AI917826 pooled germ cell tumors .c 158 to 595 1 to 438     Submitted on the opposite strand 438/438
(100 %)
3 diff
(99.4 %id)
AW590402 pooled germ cell tumors .c 158 to 699 1 to 542     Submitted on the opposite strand 542/542
(100 %)
0 diff
(100 %id)
NM_013396.3   .c 158 to 5125 1 to 4968 exact RefSeq,   4968/4968
(100 %)
0 diff
(100 %id)
AF134213   .c 176 to 3978 1 to 3803 exact     3803/3803
(100 %)
0 diff
(100 %id)
AI092963 heart .c 176 to 700 1 to 525     Submitted on the opposite strand 525/525
(100 %)
1 diff
(99.9 %id)
BE856009 Prostate .c 202 to 740 1 to 539     Submitted on the opposite strand 539/539
(100 %)
3 diff
(99.5 %id)
BF591027 colon, colon tumor, RER+ .c 210 to 761 1 to 549     Submitted on the opposite strand 549/549
(100 %)
1 diff
(99.9 %id)
TI_1948233192   .c 374 to 1306 133 to 1061       929/1347
(68 %)
25 diff
(98.2 %id)
TI_1948233341   .c 374 to 1367 128 to 1108       981/1307
(75 %)
37 diff
(97.2 %id)
TI_1948233498   .c 374 to 1308 128 to 1049   AAA   922/1277
(72 %)
21 diff
(98.4 %id)
AA482291 germinal center B cell .c 375 to 707 1 to 333     Submitted on the opposite strand 333/333
(100 %)
2 diff
(99.4 %id)
AK022574   .c 1323 to 3973 1 to 2651   available from FLJ,   2651/2651
(100 %)
0 diff
(100 %id)
AK022447 mammary gland .c 1704 to 3963 1 to 2260   available from FLJ,   2260/2260
(100 %)
0 diff
(100 %id)
CR600261 Placenta Cot 25-normalized .c 1987 to 3941 1 to 1955       1955/1955
(100 %)
0 diff
(100 %id)
AL544338 placenta, Placenta Cot 25-normalized .c 1987 to 2970 1 to 982       982/982
(100 %)
12 diff
(98.8 %id)
CK001686 brain/CNS, Bulk tissue from Human Spinal cord .c 2144 to 2768 1 to 625       625/626
(99 %)
5 diff
(99.3 %id)
DB055863 testis .c 2190 to 2752 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
CA391809 eye, RPE/choroid .c 2193 to 2869 1 to 677       677/677
(100 %)
1 diff
(99.9 %id)
BQ435767 testis .c 2206 to 2882 1 to 689       689/736
(93 %)
23 diff
(96.9 %id)
BU569569 testis .c 2272 to 3011 1 to 746       746/776
(96 %)
7 diff
(99.1 %id)
BM543125 embryonal carcinoma, cell line, testis .c 2311 to 3185 31 to 904       874/1117
(78 %)
26 diff
(97.7 %id)
BU508960 leiomyosarcoma, uterus .c 2319 to 3169 5 to 865       861/879
(97 %)
20 diff
(97.8 %id)
BP269807 thyroid .c 2373 to 2954 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
CR997145 T-Lymphocytes .c 2426 to 3312 1 to 887       887/887
(100 %)
0 diff
(100 %id)
CK903453 Islets of Langerhans, Pancreas .c 2520 to 3107 1 to 588       588/588
(100 %)
0 diff
(100 %id)
BI964840 Islets of Langerhans, Pancreas .c 2537 to 3049 1 to 513       513/514
(99 %)
0 diff
(100 %id)
TI_1948233499   .c 2563 to 3541 1111 to 128       984/1197
(82 %)
24 diff
(98.0 %id)
BF888742 testis_normal .c 2570 to 3039 469 to 1     Submitted on the opposite strand 469/476
(98 %)
9 diff
(98.2 %id)
BI253183 cervical carcinoma cell line, cervix .c 2581 to 3406 1 to 833       833/891
(93 %)
20 diff
(97.8 %id)
BF377331 testis_normal .c 2608 to 3072 1 to 465       465/469
(99 %)
8 diff
(98.3 %id)
CA397664 eye, RPE/choroid .c 2608 to 3162 1 to 555       555/555
(100 %)
0 diff
(100 %id)
TI_1948233342   .c 2649 to 3541 1023 to 126       897/1247
(71 %)
19 diff
(98.5 %id)
BF902357 marrow .c 2675 to 3049 380 to 9     Submitted on the opposite strand 372/380
(97 %)
5 diff
(98.7 %id)
TI_1948233193   .c 2675 to 3541 997 to 127       871/1214
(71 %)
18 diff
(98.6 %id)
DA833723 placenta .d 1 to 610 2 to 613   tiling clone, capped   612/619
(98 %)
6 diff
(99.1 %id)
DB380621 placenta .d 2124 to 2612 483 to 1   tiling clone,   483/540
(89 %)
11 diff
(98.0 %id)
BC015930 Skin, melanotic melanoma. .e 1 to 1843 1 to 1843 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1843/1843
(100 %)
0 diff
(100 %id)
TI_1948129464   .e 591 to 1411 949 to 126       824/1032
(79 %)
15 diff
(98.6 %id)
TI_1948130500   .e 598 to 1411 931 to 123       809/1278
(63 %)
11 diff
(99.2 %id)
TI_1948129812   .e 608 to 1411 932 to 125       808/1078
(74 %)
18 diff
(98.4 %id)
TI_1948129811   .e 609 to 1411 926 to 124       803/1384
(58 %)
8 diff
(99.5 %id)
TI_1948130501   .e 612 to 1411 921 to 126       796/1073
(74 %)
12 diff
(98.9 %id)
TI_1948129463   .e 636 to 1411 915 to 128       786/1332
(59 %)
28 diff
(97.9 %id)
TI_57174278   .f 1 to 807 65 to 870 L2V L10W A11P Q12K E13K ... tiling clone,   806/870
(92 %)
12 diff
(98.7 %id)
BI826868 brain, medulla .f 7 to 807 1 to 801 L2V L10W A11P Q12K E13K ... tiling clone,   801/801
(100 %)
6 diff
(99.3 %id)
FE530244   .g 1 to 775 1 to 775 exact tiling clone,   775/775
(100 %)
0 diff
(100 %id)
FE530254   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530264   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530274   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530283   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530294   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530306   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530317   .g 1 to 775 1 to 775 exact     775/775
(100 %)
0 diff
(100 %id)
FE530534   .h 1 to 757 1 to 757 exact tiling clone,   757/757
(100 %)
0 diff
(100 %id)
FE530535   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530545   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530546   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530556   .h 1 to 757 1 to 757 E69Q V70L     757/757
(100 %)
2 diff
(99.8 %id)
FE530557   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530565   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530566   .h 1 to 757 1 to 757 exact     757/757
(100 %)
1 diff
(99.9 %id)
FE530572   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530573   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530581   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530582   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530591   .h 1 to 757 1 to 757 L151F     757/757
(100 %)
1 diff
(99.9 %id)
FE530592   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530601   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
FE530602   .h 1 to 757 1 to 757 exact     757/757
(100 %)
0 diff
(100 %id)
CB160866 Liver .i 1 to 611 1 to 611 exact tiling clone,   611/611
(100 %)
0 diff
(100 %id)
FE530307   .j 1 to 612 1 to 612 exact tiling clone,   612/615
(99 %)
6 diff
(99.1 %id)
FE530255   .j 6 to 589 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
FE530275   .j 6 to 611 1 to 605       605/605
(100 %)
2 diff
(99.7 %id)
FE530295   .j 6 to 611 1 to 606       606/606
(100 %)
2 diff
(99.7 %id)
FE530284   .j 14 to 611 1 to 598       598/598
(100 %)
0 diff
(100 %id)
FE530318   .j 24 to 611 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
FE530265   .j 33 to 611 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
FE530245   .j 34 to 611 1 to 578       578/578
(100 %)
0 diff
(100 %id)
AL699200 human skeletal muscle .k 1 to 595 1 to 595   tiling clone,   595/595
(100 %)
1 diff
(99.9 %id)
CV340281 colon .k 73 to 285 213 to 1     Submitted on the opposite strand 213/216
(98 %)
14 diff
(93.6 %id)
DB153430 thymus .k 105 to 697 2 to 595   tiling clone, capped   594/594
(100 %)
1 diff
(99.9 %id)
BP423346 small intestine .k 544 to 1078 1 to 536 A46C M47N I48D E49* tiling clone, Submitted on the opposite strand 536/536
(100 %)
2 diff
(99.7 %id)
AK094083 uterus .l 1 to 2599 2 to 2600 M17V tiling clone, available from FLJ,   2600/2600
(100 %)
4 diff
(99.9 %id)
DB261337 uterus .l 1 to 562 2 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
DA383024 thalamus .l 593 to 1142 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB243945 stomach, tumor tissue .l 861 to 1437 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BC018686 lung .l 1242 to 2602 1 to 1361 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1361/1362
(99 %)
3 diff
(99.8 %id)
BG542625 lung .l 1245 to 1957 1 to 718   available from MGC,   718/720
(99 %)
41 diff
(94.4 %id)
DB311512 thalamus .l 2071 to 2599 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
DB351660 uterus .l 2177 to 2594 426 to 6       421/426
(98 %)
0 diff
(100 %id)
DR002221 fetal brain .m 1 to 701 1 to 701 Q14H tiling clone,   701/701
(100 %)
7 diff
(99.1 %id)
DB084857 testis .n-u 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
BX492367   .n-u 529 to 1113 9 to 592 exact tiling clone,   584/592
(98 %)
6 diff
(99.0 %id)
BX953465   .o-u 1 to 437 1 to 436   tiling clone,   436/436
(100 %)
2 diff
(99.6 %id)
AW273813 pooled .o-u 378 to 868 497 to 7 exact tiling clone,   491/497
(98 %)
0 diff
(100 %id)
BE045176 hepatic adenoma, Liver .o-u 697 to 892 10 to 206   tiling clone,   197/243
(81 %)
2 diff
(99.2 %id)
DB066596 testis .p 1 to 526 2 to 528   tiling clone, capped   527/527
(100 %)
1 diff
(99.9 %id)
DB073238 testis .p 330 to 861 2 to 533   tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
BG567138 Liver .q 1 to 310 1 to 310 K11Y I12D I13Y Y14L K15Q ... tiling clone,   838/861
(97 %)
26 diff
(97.0 %id)
DW449706 Liver .q 550 to 734 17 to 201   tiling clone,   185/202
(91 %)
8 diff
(96.1 %id)
DA145709 amygdala .r 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
BE008450 breast_normal .t-u 1 to 434 1 to 433 exact tiling clone,   433/433
(100 %)
6 diff
(98.7 %id)
BE702474 nervous_normal .u-u 1 to 374 386 to 11 S4R I16M tiling clone,   376/430
(87 %)
0 diff
(100 %id)
H91595 cochlea, ear .va-u 1 to 169 1 to 169 K17X F22X F26X Y27X tiling clone,   169/169
(100 %)
0 diff
(100 %id)
CD708088 normal nasopharynx Gene USP25, variant not shown         This clone was ignored    
DB312331 thalamus Gene USP25, variant not shown              
DA404519 thalamus Gene USP25, variant not shown       capped      
CB268382 adipose Gene USP25, variant not shown         Suspected internal deletion, this clone was ignored    
BF909432 uterus_tumor Gene USP25, variant not shown         Submitted on the opposite strand    
AL589608 human skeletal muscle Gene USP25, variant not shown         Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base)    
AL589609 human skeletal muscle Gene USP25, variant not shown       AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base)    
GD155331   Gene USP25, variant not shown              
FN163220 breast carcinoma Gene USP25, variant not shown              
DN913044   Gene USP25, variant not shown              
AW971839   Gene USP25, variant not shown         Suspected internal deletion, this clone was ignored    
H69816 liver and spleen Gene USP25, variant not shown              
N77895 lung Gene USP25, variant not shown              
W05786 lung Gene USP25, variant not shown              
AI798876 pooled Gene USP25, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
CF138264 lymph Gene USP25, variant not shown              
CB958703 Pooled-Glandular Gene USP25, variant not shown              
TI_154168093   Gene USP25, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q, .r, .s-u, .t-u, .u-u, .va-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI