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Gene UNC5CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
147 supporting clones for gene UNC5C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_003728.3   .a 1 to 9878 2 to 9879   RefSeq,   9879/9879
(100 %)
1 diff
(100.0 %id)
DA246557 brain .a 1 to 476 2 to 476   tiling clone, capped   475/575
(82 %)
2 diff
(99.7 %id)
BI769500 pooled lung and spleen .a 4 to 476 1 to 473       473/811
(58 %)
7 diff
(99.2 %id)
TI_57182520   .a 4 to 476 66 to 538       473/876
(53 %)
7 diff
(99.3 %id)
TI_57202768   .a 9 to 476 43 to 510       468/919
(50 %)
1 diff
(99.9 %id)
BX280911 pooled brain, lung, testis .a 10 to 540 1 to 531       531/531
(100 %)
0 diff
(100 %id)
BI823415 pooled brain, lung, testis .a 10 to 476 1 to 467   available from MGC,   467/876
(53 %)
1 diff
(99.9 %id)
DA286304 corpus callosum .a 108 to 476 2 to 373   capped   372/493
(75 %)
5 diff
(99.0 %id)
DA253954 caudate nucleus .a 186 to 762 2 to 578   tiling clone, capped   577/577
(100 %)
5 diff
(99.2 %id)
AK290500 brain .a 189 to 3492 1 to 3304 K621R M721T N831S tiling clone,   3304/3304
(100 %)
6 diff
(99.9 %id)
BP279135   .a 189 to 787 1 to 598       598/598
(100 %)
6 diff
(99.0 %id)
DA112523 cerebellum .a 190 to 733 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA503733 brain .a 190 to 739 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
BP278633   .a 191 to 793 1 to 603       603/603
(100 %)
3 diff
(99.6 %id)
DA104110 cerebellum .a 192 to 743 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
AF055634 brain .a 199 to 3844 1 to 3646 T489S Q651K M721T tiling clone,   3646/3646
(100 %)
8 diff
(99.8 %id)
BP313656 mammary gland .a 234 to 815 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
BP315108 mammary gland .a 237 to 818 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB081323 testis .a 238 to 787 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB234595 trachea .a 238 to 822 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
BP199564 brain .a 240 to 821 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP312451 mammary gland .a 240 to 822 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP315687 mammary gland .a 240 to 822 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
EL734344 mixed .a 353 to 1001 1 to 649       649/654
(99 %)
3 diff
(99.6 %id)
BE764654 nervous_tumor .a 475 to 1031 559 to 3       557/586
(95 %)
2 diff
(99.7 %id)
DA125619 cerebellum .a 475 to 966 85 to 576   capped   494/575
(85 %)
6 diff
(99.0 %id)
BF037457 adenocarcinoma, ovary .a 475 to 1127 13 to 671       662/758
(87 %)
23 diff
(97.0 %id)
AW900136 nervous_normal .a 644 to 1035 392 to 1       392/394
(99 %)
1 diff
(99.8 %id)
BE700724 nervous_normal .a 837 to 1275 16 to 459       450/459
(98 %)
8 diff
(98.3 %id)
AA348167 heart .a 1666 to 2003 1 to 338       338/338
(100 %)
2 diff
(99.5 %id)
AL119797 amygdala .a 1929 to 2255 1 to 327       327/329
(99 %)
2 diff
(99.4 %id)
BX098093 adenocarcinoma, Pancreas .a 3057 to 3498 456 to 15   AAA   442/442
(100 %)
0 diff
(100 %id)
AI677642 adenocarcinoma, Pancreas .a 3095 to 3498 414 to 11   AAA   404/404
(100 %)
0 diff
(100 %id)
CD617402   .a 3110 to 3929 13 to 829   tiling clone,   817/829
(98 %)
6 diff
(99.3 %id)
TI_154049742   .a 3274 to 3994 782 to 72   AAA   711/914
(77 %)
23 diff
(97.5 %id)
AI621080 pooled germ cell tumors .a 3396 to 3985 599 to 10       590/599
(98 %)
0 diff
(100 %id)
BF742089 bocio_tumor .a 3499 to 3601 120 to 17     Submitted on the opposite strand 104/120
(86 %)
0 diff
(100 %id)
AI917731 pooled germ cell tumors .a 3500 to 3994 495 to 1       495/495
(100 %)
3 diff
(99.4 %id)
CD617403   .a 3523 to 4131 617 to 1   tiling clone,   617/621
(99 %)
11 diff
(98.3 %id)
AW078867 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 3566 to 3878 313 to 1       313/313
(100 %)
0 diff
(100 %id)
AI187839   .a 3698 to 3994 298 to 4       295/298
(98 %)
0 diff
(100 %id)
T09065   .a 3972 to 4358 1 to 389   tiling clone,   389/393
(98 %)
3 diff
(99.3 %id)
BX109680 whole brain .a 4533 to 5050 1 to 516       516/516
(100 %)
5 diff
(99.1 %id)
R56292 whole brain .a 4533 to 4834 1 to 304   tiling clone,   304/304
(100 %)
3 diff
(99.1 %id)
BG898190 cartilage .a 4764 to 5052 75 to 363       289/295
(97 %)
11 diff
(96.3 %id)
BX538341 human small intestine .a 4783 to 9872 8 to 5097   tiling clone, available from DKFZ, AAA   5090/5097
(99 %)
6 diff
(99.9 %id)
DA336924 hippocampus .a 4921 to 5503 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
AA868042 pooled .a 5335 to 5658 339 to 16   AAA   324/324
(100 %)
0 diff
(100 %id)
R56209 whole brain .a 5390 to 5654 275 to 10       266/275
(96 %)
0 diff
(100 %id)
T16568   .a 5426 to 5655 230 to 1       230/230
(100 %)
0 diff
(100 %id)
FN059292 breast carcinoma .a 5606 to 5662 1 to 57       57/58
(98 %)
1 diff
(98.3 %id)
DB062577 testis .a 5703 to 6250 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
CN291575 embryonic stem cells, DMSO-treated H9 cellline .a 5742 to 6404 1 to 664       664/664
(100 %)
1 diff
(99.9 %id)
DA414567 thalamus .a 5759 to 6305 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DA333167 hippocampus .a 6047 to 6639 2 to 594   tiling clone, capped   593/593
(100 %)
0 diff
(100 %id)
DA289461 hippocampus .a 6188 to 6741 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
DA196277 amygdala .a 6298 to 6866 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA408991 thalamus .a 6385 to 7030 2 to 646   capped   645/645
(100 %)
1 diff
(99.9 %id)
DA211384 brain .a 6398 to 6876 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
DA221319 brain .a 6424 to 6934 2 to 514   capped   513/513
(100 %)
3 diff
(99.5 %id)
CV319376 nervous_normal .a 6498 to 6682 194 to 11     Submitted on the opposite strand 184/202
(91 %)
0 diff
(100 %id)
CN304271 embryonic stem cells, cell lines H1, H7, andH9 .a 6640 to 7371 1 to 732       732/732
(100 %)
3 diff
(99.6 %id)
DN994415 brain, whole brain .a 6731 to 7358 1 to 628       628/628
(100 %)
4 diff
(99.4 %id)
H19217 whole brain .a 6784 to 7241 1 to 474     Submitted on the opposite strand 474/475
(99 %)
32 diff
(93.3 %id)
CR736293   .a 6786 to 6995 1 to 212     Submitted on the opposite strand 212/215
(98 %)
9 diff
(95.9 %id)
BU682118 lung .a 6786 to 7170 1 to 383     Submitted on the opposite strand 383/391
(97 %)
5 diff
(98.8 %id)
Z39354 brain, total brain .a 6800 to 7147 1 to 348     Submitted on the opposite strand 348/348
(100 %)
3 diff
(99.2 %id)
FN098678 breast carcinoma .a 6831 to 6917 1 to 87       87/94
(92 %)
3 diff
(96.9 %id)
BF671075 muscle (skeletal) .a 6927 to 7661 734 to 1     Submitted on the opposite strand 734/750
(97 %)
24 diff
(96.8 %id)
DA306549 hippocampus .a 7024 to 7296 2 to 274   capped   273/275
(99 %)
2 diff
(99.3 %id)
AK022487 mammary gland .a 7131 to 9872 1 to 2742   tiling clone, available from FLJ,   2742/2742
(100 %)
3 diff
(99.9 %id)
AU122777 mammary gland .a 7132 to 7924 2 to 792   capped   791/801
(98 %)
4 diff
(99.6 %id)
BF919402 nervous_tumor .a 7196 to 7502 315 to 9     Submitted on the opposite strand 307/315
(97 %)
0 diff
(100 %id)
CN360174 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 7477 to 8236 1 to 760       760/760
(100 %)
5 diff
(99.4 %id)
CR610949 Neuroblastoma Cot 50-normalized .a 7555 to 9850 1 to 2296       2296/2296
(100 %)
0 diff
(100 %id)
AL529695 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 7555 to 8518 1 to 957       957/1001
(95 %)
21 diff
(98.0 %id)
DB200844 trachea .a 7683 to 8269 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA390260 thalamus .a 7789 to 8389 2 to 598   capped   597/597
(100 %)
3 diff
(99.5 %id)
DA300968 hippocampus .a 7803 to 8376 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BF439782 carcinoid, lung .a 7865 to 8437 1 to 573     Submitted on the opposite strand 573/573
(100 %)
2 diff
(99.7 %id)
BG150119 carcinoid, lung .a 7865 to 8193 1 to 329     Submitted on the opposite strand 329/329
(100 %)
0 diff
(100 %id)
BF433562 carcinoid, lung .a 7865 to 8331 1 to 467     Submitted on the opposite strand 467/467
(100 %)
1 diff
(99.8 %id)
H19216 whole brain .a 7875 to 8357 494 to 1     Submitted on the opposite strand 494/498
(99 %)
9 diff
(98.2 %id)
FN135388 breast carcinoma .a 7886 to 7990 104 to 1     Submitted on the opposite strand 104/104
(100 %)
1 diff
(99.1 %id)
DA914920   .a 7953 to 8479 2 to 528   capped   527/527
(100 %)
2 diff
(99.7 %id)
DA891200 rectum .a 7978 to 8553 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
Z43281 brain, total brain .a 7979 to 8359 380 to 1       380/380
(100 %)
2 diff
(99.5 %id)
R36732 whole brain .a 8048 to 8399 1 to 358       358/438
(81 %)
7 diff
(98.5 %id)
R17845 whole brain .a 8048 to 8492 1 to 446       446/448
(99 %)
4 diff
(99.2 %id)
FN064872 breast carcinoma .a 8108 to 8222 1 to 114       114/114
(100 %)
1 diff
(99.2 %id)
BM720932 eye, fetal eye .a 8115 to 8796 1 to 682       682/682
(100 %)
2 diff
(99.8 %id)
FN147086 breast carcinoma .a 8218 to 8301 85 to 3     Submitted on the opposite strand 83/85
(97 %)
0 diff
(100 %id)
FN147802 breast carcinoma .a 8218 to 8301 86 to 4     Submitted on the opposite strand 83/86
(96 %)
0 diff
(100 %id)
BI756908 brain .a 8244 to 9107 1 to 869       869/869
(100 %)
17 diff
(98.1 %id)
BX279757 brain .a 8245 to 8743 1 to 499       499/499
(100 %)
0 diff
(100 %id)
CR747595 leukocyte .a 8245 to 8749 1 to 505       505/505
(100 %)
0 diff
(100 %id)
TI_57220160   .a 8245 to 9107 72 to 939       868/939
(92 %)
6 diff
(99.4 %id)
BX348743 Neuroblastoma Cot 50-normalized .a 8302 to 9225 1 to 923       923/924
(99 %)
10 diff
(99.0 %id)
CN360175 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 8311 to 8788 1 to 478       478/478
(100 %)
5 diff
(99.0 %id)
BX349999 Neuroblastoma Cot 50-normalized .a 8339 to 8969 638 to 1       638/956
(66 %)
0 diff
(100 %id)
AA425970 ovarian tumor, ovary .a 8415 to 8914 1 to 500       500/500
(100 %)
0 diff
(100 %id)
BF356663 head_neck .a 8500 to 8744 34 to 279       246/279
(88 %)
6 diff
(97.9 %id)
CN360176 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 8561 to 8922 1 to 362       362/362
(100 %)
0 diff
(100 %id)
FN150060 breast carcinoma .a 8570 to 8665 1 to 96       96/96
(100 %)
2 diff
(98.0 %id)
FN046344 breast carcinoma .a 8589 to 8686 98 to 1     Submitted on the opposite strand 98/98
(100 %)
0 diff
(100 %id)
BQ340587 nervous_normal .a 8665 to 9305 15 to 650       636/652
(97 %)
10 diff
(98.5 %id)
FN166673 breast carcinoma .a 8723 to 8832 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
BG036439 adenocarcinoma, cell line, Prostate .a 8725 to 9410 1 to 680       680/936
(72 %)
20 diff
(97.9 %id)
AL563523 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 8732 to 9850 1109 to 1       1109/1112
(99 %)
19 diff
(98.3 %id)
BM678560 eye, fetal eye .a 9186 to 9872 705 to 19   AAA   687/687
(100 %)
0 diff
(100 %id)
N51181 multiple sclerosis lesions .a 9221 to 9438 49 to 269   fully sequenced,   221/269
(82 %)
6 diff
(97.8 %id)
BQ340607 nervous_normal .a 9254 to 9832 584 to 8       577/584
(98 %)
0 diff
(100 %id)
AW897150 nervous_normal .a 9274 to 9602 330 to 1       330/330
(100 %)
2 diff
(99.4 %id)
AW070250 pooled .a 9296 to 9872 577 to 1       577/577
(100 %)
0 diff
(100 %id)
AU148280 mammary gland .a 9314 to 9872 554 to 1       554/560
(98 %)
13 diff
(97.7 %id)
DB309930 hippocampus .a 9324 to 9872 549 to 1       549/549
(100 %)
0 diff
(100 %id)
BM988863 lung, Lung Focal Fibrosis .a 9325 to 9875 569 to 19   AAA   551/551
(100 %)
2 diff
(99.7 %id)
DB307587 hippocampus .a 9327 to 9872 546 to 1       546/546
(100 %)
0 diff
(100 %id)
T51283 fetal spleen, Spleen .a 9358 to 9878 529 to 3   tiling clone,   527/530
(99 %)
0 diff
(100 %id)
AW262889 brain, three pooled meningiomas .a 9387 to 9872 497 to 12   AAA   486/486
(100 %)
4 diff
(99.2 %id)
CN351007 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 9395 to 9849 9 to 463       455/463
(98 %)
6 diff
(98.8 %id)
N47979 multiple sclerosis lesions .a 9411 to 9872 468 to 1   fully sequenced,   468/468
(100 %)
10 diff
(97.9 %id)
AW770268 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 9413 to 9872 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AW592444 pooled .a 9419 to 9872 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
AA426261 ovarian tumor, ovary .a 9432 to 9872 440 to 1       440/440
(100 %)
1 diff
(99.8 %id)
BQ340605 nervous_normal .a 9459 to 9852 393 to 10       384/393
(97 %)
0 diff
(100 %id)
AW449466   .a 9464 to 9872 426 to 18   AAA   409/409
(100 %)
0 diff
(100 %id)
BQ340601 nervous_normal .a 9474 to 9838 365 to 2       364/365
(99 %)
0 diff
(100 %id)
AI215468 pooled .a 9493 to 9873 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AI220214 pooled .a 9505 to 9872 368 to 1       368/368
(100 %)
1 diff
(99.8 %id)
AA665565   .a 9515 to 9741 226 to 1       226/226
(100 %)
1 diff
(99.6 %id)
AI472908 pooled .a 9515 to 9874 361 to 2       360/361
(99 %)
0 diff
(100 %id)
AA973007 pooled .a 9524 to 9871 347 to 1       347/347
(100 %)
1 diff
(99.8 %id)
R43047 whole brain .a 9537 to 9872 345 to 11   AAA   335/335
(100 %)
1 diff
(99.8 %id)
AA983753 pooled .a 9546 to 9868 322 to 1       322/322
(100 %)
1 diff
(99.7 %id)
BQ340569 nervous_normal .a 9641 to 9845 212 to 3       210/212
(99 %)
0 diff
(100 %id)
BQ340611 nervous_normal .a 9659 to 9832 181 to 3       179/185
(96 %)
0 diff
(100 %id)
DV459668 cochlea, ear .a 9708 to 9821 1 to 114       114/114
(100 %)
2 diff
(98.3 %id)
T60059 lung .a 9758 to 9875 119 to 1       119/119
(100 %)
5 diff
(95.8 %id)
AK308421 trachea .b 1 to 2350 2 to 2350 E215K L761W D762M D763T T764P ... tiling clone,   2350/2350
(100 %)
6 diff
(99.8 %id)
BC041156 Lung, Spleen, fetal, pooled .c 1 to 2218 1 to 2218 T335I tiling clone, available from MGC, AAA   2218/2218
(100 %)
3 diff
(99.9 %id)
BC034747 Brain, Lung, Testis, adult, pooled whole .d 1 to 1788 1 to 1788 exact tiling clone, available from MGC, AAA   1788/1788
(100 %)
3 diff
(99.9 %id)
BP312672 mammary gland .e 1 to 579 4 to 582 M91N N92E S93F I94Y T95H ... tiling clone,   582/582
(100 %)
8 diff
(98.7 %id)
DA297124 hippocampus Gene UNC5C, variant not shown       capped Suspected internal deletion, this clone was ignored    
BX092876 liver and spleen Gene UNC5C, variant not shown       AAA This clone was ignored    
CR743554   Gene UNC5C, variant not shown       AAA This clone was ignored    
FN130477 breast carcinoma Gene UNC5C, variant not shown         Submitted on the opposite strand    
AV726037 hypothalamus Gene UNC5C, variant not shown         Suspected internal deletion, this clone was ignored    
R02580 liver and spleen Gene UNC5C, variant not shown         This clone was ignored    
R02699 liver and spleen Gene UNC5C, variant not shown         This clone was ignored    
N34287 multiple sclerosis lesions Gene UNC5C, variant not shown       AAA      
N44178 multiple sclerosis lesions Gene UNC5C, variant not shown              
W78957 liver and spleen Gene UNC5C, variant not shown       fully sequenced, This clone was ignored    
W80451 liver and spleen Gene UNC5C, variant not shown       fully sequenced, This clone was ignored    
AA976281 Kidney, kidney tumor Gene UNC5C, variant not shown         Suspected internal deletion, this clone was ignored    
DA920597 small intestine Gene UNC5C, variant not shown       capped      
DB331906 small intestine Gene UNC5C, variant not shown              
DB335262 breast, tumor tissue Gene UNC5C, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI