To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene UBL5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
501 supporting clones for gene UBL5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB119150 Liver .a 1 to 361 1 to 361   tiling clone,   361/361
(100 %)
2 diff
(99.5 %id)
DB014737 esophageal, tumor tissue .a 2 to 545 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DW426102 Liver .a 4 to 269 18 to 283       266/283
(93 %)
6 diff
(97.9 %id)
BG116673 duodenal adenocarcinoma, cell line, small intestine .a 13 to 622 1 to 610 exact     610/627
(97 %)
3 diff
(99.6 %id)
CB109999 Liver .a 18 to 518 1 to 501 exact     501/501
(100 %)
0 diff
(100 %id)
BP295728   .a 19 to 593 1 to 575 exact     575/575
(100 %)
0 diff
(100 %id)
BU506771 mixed (pool of 40 RNAs) .a 25 to 626 1 to 603 exact     603/607
(99 %)
6 diff
(99.1 %id)
BG575358 breast, mammary adenocarcinoma, cell line .a 37 to 621 1 to 584 exact tiling clone, AAA   584/584
(100 %)
1 diff
(99.9 %id)
W03741 lung .a 38 to 313 1 to 277   fully sequenced,   277/277
(100 %)
6 diff
(97.9 %id)
CN274749 embryonic stem cells, DMSO-treated H9 cellline .a 41 to 240 1 to 200       200/200
(100 %)
5 diff
(97.5 %id)
BG029810 breast, mammary adenocarcinoma, cell line .a 51 to 622 1 to 571 exact AAA   571/571
(100 %)
1 diff
(99.9 %id)
AI028146 parathyroid gland, parathyroid tumor .a 96 to 626 545 to 15 exact AAA   531/531
(100 %)
2 diff
(99.7 %id)
AI027821 parathyroid gland, parathyroid tumor .a 96 to 626 539 to 9 exact     531/539
(98 %)
0 diff
(100 %id)
CN263372 embryonic stem cells, cell lines H1, H7, andH9 .a 208 to 469 1 to 262       262/262
(100 %)
1 diff
(99.7 %id)
AI143015 senescent fibroblast .a 237 to 622 391 to 6       386/391
(98 %)
14 diff
(96.5 %id)
AA010673 heart .a 265 to 606 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
AA837248 germinal center B cell .a 270 to 623 367 to 14   AAA   354/354
(100 %)
2 diff
(99.5 %id)
AA680363 liver and spleen .a 281 to 622 342 to 1       342/342
(100 %)
2 diff
(99.5 %id)
N73968 lung .a 283 to 622 341 to 1   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
AK128885 thymus .b 1 to 518 1 to 513 N7S tiling clone, available from FLJ,   513/513
(100 %)
4 diff
(99.3 %id)
NM_024292.3   .b 1 to 524 1 to 519 exact RefSeq, AAA   519/519
(100 %)
2 diff
(99.7 %id)
DB113938 thymus .b 2 to 518 2 to 513 N7S capped   512/520
(98 %)
5 diff
(99.1 %id)
BG258323 embryonal carcinoma, cell line, testis .b 15 to 519 1 to 500 exact tiling clone, AAA   500/500
(100 %)
2 diff
(99.6 %id)
BU603299 mixed (pool of 40 RNAs) .b 18 to 519 1 to 497 K41Q     497/501
(99 %)
7 diff
(98.7 %id)
BU963403 mixed (pool of 40 RNAs) .b 18 to 516 1 to 494 K17R     494/532
(92 %)
13 diff
(97.6 %id)
BU587762 mixed (pool of 40 RNAs) .b 24 to 519 1 to 491 exact     491/526
(93 %)
5 diff
(99.1 %id)
BM749629 stomach .b 25 to 477 1 to 446 exact     446/446
(100 %)
8 diff
(98.3 %id)
BP208220 cerebellum .b 27 to 518 1 to 486 W39* AAA   486/486
(100 %)
4 diff
(99.2 %id)
CB110899 Liver .b 31 to 510 1 to 475 exact     475/475
(100 %)
3 diff
(99.4 %id)
CR593093 Neuroblastoma Cot 25-normalized .b 35 to 522 1 to 483 exact     483/483
(100 %)
2 diff
(99.6 %id)
BU599808 mixed (pool of 40 RNAs) .b 36 to 519 1 to 479 exact     479/483
(99 %)
5 diff
(99.0 %id)
BX353331 Neuroblastoma Cot 25-normalized .b 40 to 522 8 to 486 I50X K52* fully sequenced,   479/486
(98 %)
12 diff
(97.6 %id)
BU599485 mixed (pool of 40 RNAs) .b 40 to 518 1 to 474 exact     474/483
(98 %)
6 diff
(98.8 %id)
BP368010 thymus .b 43 to 518 1 to 471 exact     471/579
(81 %)
4 diff
(99.4 %id)
CB125483 Liver .b 44 to 518 1 to 466 C18S N19R T20M D21I D22P ... AAA   466/466
(100 %)
2 diff
(99.6 %id)
BC007053 Kidney, hypernephroma .b 47 to 518 1 to 467 exact available from MGC, AAA   467/467
(100 %)
3 diff
(99.4 %id)
BQ438892 epithelioid carcinoma, Pancreas .b 47 to 518 1 to 467 exact AAA   467/467
(100 %)
2 diff
(99.6 %id)
F24482 pectoral muscle (after mastectomy) .b 51 to 439 1 to 384 exact     384/384
(100 %)
2 diff
(99.5 %id)
BU963695 mixed (pool of 40 RNAs) .b 55 to 522 1 to 464 exact     464/494
(93 %)
9 diff
(98.2 %id)
H55975 liver and spleen .b 57 to 360 1 to 299   fully sequenced,   299/299
(100 %)
2 diff
(99.4 %id)
EC473918 Prostate .b 59 to 170 7 to 117       111/117
(94 %)
6 diff
(94.9 %id)
AA527091 colon .b 63 to 445 378 to 1 Q34K     378/464
(81 %)
21 diff
(95.5 %id)
W33034 parathyroid gland, parathyroid tumor .b 66 to 513 1 to 449 I50T K52*     449/449
(100 %)
8 diff
(98.3 %id)
BF031580 hypernephroma, Kidney .b 66 to 518 1 to 446 exact AAA   446/446
(100 %)
6 diff
(98.7 %id)
BP424551 small intestine .b 74 to 518 1 to 442 D21G D22*   Submitted on the opposite strand 442/446
(99 %)
11 diff
(97.6 %id)
R67830 placenta .b 83 to 364 1 to 279       279/367
(76 %)
10 diff
(97.3 %id)
R66514 placenta .b 83 to 396 1 to 310       310/317
(97 %)
10 diff
(96.9 %id)
AW841585 colon_normal .b 90 to 428 31 to 364 exact     334/364
(91 %)
8 diff
(97.9 %id)
BG755941 B-cells, primary B-cells from tonsils (cell line) .b 129 to 518 1 to 384 exact AAA   384/384
(100 %)
6 diff
(98.5 %id)
AA972242 carcinoid, lung .b 136 to 519 393 to 15 exact tiling clone, AAA   379/379
(100 %)
3 diff
(99.3 %id)
BQ424245 eye, retinoblastoma .b 177 to 518 1 to 336 exact AAA   336/336
(100 %)
0 diff
(100 %id)
BX350854 Neuroblastoma Cot 25-normalized .b 215 to 516 299 to 1   fully sequenced,   299/299
(100 %)
3 diff
(99.0 %id)
H55976 liver and spleen .b 299 to 518 220 to 1   fully sequenced,   220/220
(100 %)
0 diff
(100 %id)
BU941022 mixed (pool of 40 RNAs) .c 1 to 448 1 to 448 exact tiling clone,   448/511
(87 %)
3 diff
(99.5 %id)
BG614905 embryonal carcinoma, testis .c 3 to 445 1 to 443 exact     443/837
(52 %)
1 diff
(99.9 %id)
AV682189 hepatocellular carcinoma .c 4 to 417 1 to 414 K41R     414/414
(100 %)
3 diff
(99.3 %id)
BP213042 cerebrum .c 9 to 447 1 to 439 I24M     439/439
(100 %)
5 diff
(98.9 %id)
BG700170 brain, hippocampus .c 11 to 448 1 to 438 exact AAA   438/438
(100 %)
6 diff
(98.7 %id)
BG700132 brain, hippocampus .c 11 to 448 1 to 438 exact AAA   438/438
(100 %)
6 diff
(98.7 %id)
BP196203 adrenal gland .c 16 to 447 1 to 432 D53N AAA   432/432
(100 %)
1 diff
(99.8 %id)
AK311889 Prostate .c 16 to 341 1 to 326 K12E     326/326
(100 %)
1 diff
(99.7 %id)
BP213061 cerebrum .c 16 to 447 1 to 432 exact AAA   432/432
(100 %)
0 diff
(100 %id)
BP213482 cerebrum .c 16 to 448 1 to 433 exact AAA   433/433
(100 %)
0 diff
(100 %id)
BP263618 small intestine .c 16 to 448 1 to 433 exact     433/468
(92 %)
1 diff
(99.8 %id)
CB110419 Liver .c 16 to 427 1 to 412 exact     412/412
(100 %)
0 diff
(100 %id)
BP294950   .c 16 to 448 1 to 433 exact AAA   433/433
(100 %)
0 diff
(100 %id)
NM_001048241.1   .c 16 to 454 1 to 439 exact RefSeq, AAA   439/439
(100 %)
0 diff
(100 %id)
BP316848 pericardium .c 16 to 448 1 to 434 exact AAA   434/434
(100 %)
6 diff
(98.7 %id)
BP318288 pericardium .c 16 to 448 1 to 433 exact AAA   433/433
(100 %)
1 diff
(99.8 %id)
DW420535 Liver .c 17 to 308 8 to 300       293/300
(97 %)
7 diff
(97.7 %id)
DA878032 Prostate .c 17 to 448 2 to 433 K12E capped   432/438
(98 %)
2 diff
(99.6 %id)
AU309599 neuroblastoma .c 18 to 448 34 to 465 V4X L10M K29X A33X R38X ...     432/476
(90 %)
11 diff
(97.7 %id)
CN256883 embryonic stem cells, cell lines H1, H7, andH9 .c 19 to 449 1 to 432 exact AAA   432/432
(100 %)
4 diff
(99.1 %id)
BF208315 bladder, carcinoma, cell line .c 19 to 440 1 to 424 N7K D8T R9V L10W K12R ...     424/653
(64 %)
12 diff
(98.2 %id)
TI_149310440   .c 19 to 448 557 to 128 D53G S56F D59G AAA   430/847
(50 %)
10 diff
(98.9 %id)
BU688660 lung, Primary Lung Epithelial Cells .c 19 to 448 448 to 19 D53G S56F D59G AAA   430/565
(76 %)
10 diff
(98.3 %id)
CB218220 mandible, pooled .c 21 to 451 1 to 431 Q73R fully sequenced, AAA   431/431
(100 %)
1 diff
(99.8 %id)
BU935290 mixed (pool of 40 RNAs) .c 21 to 446 1 to 426 exact     426/462
(92 %)
3 diff
(99.4 %id)
BU943608 mixed (pool of 40 RNAs) .c 21 to 445 1 to 425 exact     425/435
(97 %)
4 diff
(99.1 %id)
AV740290 cord Blood .c 23 to 446 47 to 469 R38L W39G N40T K41R I42L ...     423/472
(89 %)
13 diff
(97.3 %id)
BJ991683.
matches multiple genes
hepatoblastoma .c 23 to 421 399 to 1 exact   also hits gene COMP 399/439
(90 %)
0 diff
(100 %id)
BJ996208 hepatoblastoma .c 23 to 448 1 to 426 exact     426/426
(100 %)
0 diff
(100 %id)
BU564770 mixed (pool of 40 RNAs) .c 23 to 448 1 to 428 exact     428/877
(48 %)
5 diff
(99.5 %id)
BU940474 mixed (pool of 40 RNAs) .c 23 to 446 1 to 424 exact     424/892
(47 %)
10 diff
(98.9 %id)
CD104935 Pooled-Skin .c 23 to 447 1 to 425 exact     425/428
(99 %)
3 diff
(99.3 %id)
CB113914 Liver .c 23 to 448 1 to 426 exact AAA   426/426
(100 %)
0 diff
(100 %id)
BP368153 thymus .c 23 to 449 1 to 428 K12Q K13E V14G R15P V16R ... AAA   428/428
(100 %)
3 diff
(99.3 %id)
BP376750 uterus .c 23 to 448 1 to 426 exact AAA   426/426
(100 %)
2 diff
(99.6 %id)
CD239207 Pituitary .c 24 to 451 1 to 428 exact AAA   428/428
(100 %)
1 diff
(99.8 %id)
EL950013 eyeball .c 25 to 447 1 to 423 exact AAA   423/423
(100 %)
2 diff
(99.6 %id)
BG532713 embryonal carcinoma, testis .c 25 to 417 1 to 393 exact     393/533
(73 %)
4 diff
(99.3 %id)
BM921674 pooled brain, lung, testis .c 25 to 448 17 to 440 exact AAA   424/440
(96 %)
6 diff
(98.7 %id)
BU959255 mixed (pool of 40 RNAs) .c 25 to 456 1 to 432 exact     432/832
(51 %)
8 diff
(99.1 %id)
BP295243   .c 25 to 448 1 to 424 exact AAA   424/424
(100 %)
1 diff
(99.8 %id)
BP319637 pericardium .c 25 to 448 1 to 424 exact AAA   424/424
(100 %)
0 diff
(100 %id)
DW417302 Liver .c 26 to 314 18 to 306       289/306
(94 %)
6 diff
(98.1 %id)
DB537093 hippocampus .c 26 to 448 19 to 442 exact   Submitted on the opposite strand 424/442
(95 %)
7 diff
(98.5 %id)
CB140521 Liver .c 26 to 447 12 to 433 E3D K13N     422/433
(97 %)
9 diff
(98.0 %id)
BP305538   .c 26 to 452 1 to 427 exact AAA   427/427
(100 %)
0 diff
(100 %id)
BG778956 adenocarcinoma, Prostate .c 27 to 448 1 to 422 exact AAA   422/422
(100 %)
0 diff
(100 %id)
AJ708473 heart .c 28 to 347 20 to 339 exact     320/339
(94 %)
6 diff
(98.3 %id)
DB469512 hippocampus .c 29 to 448 1 to 420 exact AAA   420/420
(100 %)
1 diff
(99.8 %id)
BQ025519 placenta .c 29 to 447 437 to 19 exact AAA   419/427
(98 %)
1 diff
(99.8 %id)
BG223143 nasopharynx, normal epithelium .c 31 to 447 1 to 417 exact     417/426
(97 %)
6 diff
(98.6 %id)
AW163423.
matches multiple genes
brain, frontal lobe .c 32 to 345 1 to 314 G58X   also hits gene SNHG9andSNORA78 314/314
(100 %)
0 diff
(100 %id)
AV744150 cord Blood .c 33 to 447 21 to 428 V5G C6N N7D D8R R9L ... AAA   412/428
(96 %)
19 diff
(95.6 %id)
BM921654 pooled brain, lung, testis .c 35 to 448 1 to 414 exact AAA   414/414
(100 %)
0 diff
(100 %id)
BM921655 pooled brain, lung, testis .c 35 to 448 1 to 414 exact AAA   414/414
(100 %)
0 diff
(100 %id)
BP316223 pericardium .c 35 to 448 1 to 414 exact     414/583
(71 %)
4 diff
(99.4 %id)
AJ708552 heart .c 36 to 448 424 to 12 exact AAA Submitted on the opposite strand 413/423
(97 %)
0 diff
(100 %id)
BU602237 mixed (pool of 40 RNAs) .c 36 to 447 1 to 412 exact     412/448
(91 %)
3 diff
(99.4 %id)
BU533653 mixed (pool of 40 RNAs) .c 36 to 449 1 to 414 exact     414/848
(48 %)
3 diff
(99.7 %id)
DW452247 Liver .c 37 to 389 18 to 370 D22N E69Q     353/370
(95 %)
10 diff
(97.3 %id)
AA046538 uterus .c 37 to 293 1 to 257   fully sequenced,   257/257
(100 %)
0 diff
(100 %id)
BG574821 breast, mammary adenocarcinoma, cell line .c 37 to 448 28 to 439 exact AAA   412/439
(93 %)
6 diff
(98.7 %id)
BI762306 pooled colon, kidney, stomach .c 37 to 447 1 to 411 exact AAA   411/411
(100 %)
0 diff
(100 %id)
TI_57151530   .c 37 to 447 27 to 437 exact AAA   411/437
(94 %)
6 diff
(98.7 %id)
BP370561 testis .c 37 to 448 1 to 412 exact AAA   412/412
(100 %)
2 diff
(99.6 %id)
BM665419 eye, optic nerve .c 37 to 452 434 to 19 exact AAA   416/425
(97 %)
0 diff
(100 %id)
DW412329 Liver .c 38 to 350 13 to 325 I50F     313/325
(96 %)
7 diff
(97.9 %id)
DW423956 Liver .c 38 to 312 13 to 290       278/290
(95 %)
10 diff
(96.6 %id)
DW444469 Liver .c 38 to 250 13 to 226       214/226
(94 %)
8 diff
(96.5 %id)
T39525 placenta .c 38 to 323 1 to 288       288/288
(100 %)
2 diff
(99.4 %id)
T67659 liver and spleen .c 38 to 206 1 to 168   fully sequenced,   168/168
(100 %)
1 diff
(99.5 %id)
BP378564 uterus .c 38 to 448 1 to 411 exact AAA   411/411
(100 %)
4 diff
(99.1 %id)
CD177223 embryonic trophoblasts, made from WA01 stemcells .c 39 to 448 16 to 425 exact AAA   410/425
(96 %)
6 diff
(98.6 %id)
CD385512 embryonic trophoblasts, made from WA01 stemcells .c 39 to 447 16 to 429 T20P D21A D22R T23M G25P ... AAA   409/429
(95 %)
6 diff
(98.7 %id)
AW163422.
matches multiple genes
brain, frontal lobe .c 39 to 407 1 to 369 exact   also hits gene LOC100287215 369/369
(100 %)
0 diff
(100 %id)
BG576379 breast, mammary adenocarcinoma, cell line .c 39 to 448 1 to 410 exact AAA   410/410
(100 %)
0 diff
(100 %id)
BU958256 mixed (pool of 40 RNAs) .c 39 to 449 1 to 411 exact     411/449
(91 %)
3 diff
(99.4 %id)
BP304292   .c 39 to 448 1 to 410 exact AAA   410/410
(100 %)
0 diff
(100 %id)
BP316973 pericardium .c 39 to 448 1 to 410 exact     410/583
(70 %)
1 diff
(99.9 %id)
BP373308 umbilical cord .c 39 to 447 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
BM710398 eye, optic nerve .c 39 to 189 1 to 151   fully sequenced,   151/151
(100 %)
0 diff
(100 %id)
BU940627 mixed (pool of 40 RNAs) .c 40 to 444 1 to 408 exact     408/703
(58 %)
10 diff
(98.6 %id)
CB999022 Pooled-Skin .c 40 to 446 1 to 407 exact     407/830
(49 %)
3 diff
(99.7 %id)
BP330642 rectum .c 40 to 448 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
BP346996 brain .c 40 to 459 1 to 421 K12* AAA   421/575
(73 %)
6 diff
(99.0 %id)
CD388443 embryonic trophoblasts, made from WA01 stemcells .c 41 to 448 23 to 430 T37S AAA   408/430
(94 %)
7 diff
(98.4 %id)
BP226004   .c 41 to 448 1 to 408 exact AAA   408/408
(100 %)
1 diff
(99.8 %id)
BI550222 brain, hippocampus .c 41 to 448 1 to 408 exact     408/452
(90 %)
6 diff
(98.7 %id)
AA092713   .c 42 to 218 1 to 172       172/172
(100 %)
14 diff
(91.9 %id)
BP196919 adrenal gland .c 42 to 447 1 to 406 exact     406/519
(78 %)
1 diff
(99.9 %id)
BP209361 cerebellum .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP209619 cerebellum .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP211348 cerebellum .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BP214049 cerebrum .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
CD175909 embryonic stem cells, WA01, passage 38 .c 42 to 448 25 to 431 exact AAA   407/431
(94 %)
6 diff
(98.7 %id)
CD385819 embryonic trophoblasts, made from WA01 stemcells .c 42 to 448 60 to 466 exact AAA   407/466
(87 %)
6 diff
(98.8 %id)
CD686137 normal nasopharynx .c 42 to 448 32 to 438 exact AAA   407/438
(92 %)
6 diff
(98.7 %id)
CO408431   .c 42 to 404 364 to 1 N19H D59G Y60L E61*   Submitted on the opposite strand 364/368
(98 %)
4 diff
(99.0 %id)
AV712501   .c 42 to 430 1 to 389 exact     389/520
(74 %)
1 diff
(99.9 %id)
DV643930   .c 42 to 404 364 to 1 N19H D59G Y60L E61*   Submitted on the opposite strand 364/434
(83 %)
4 diff
(99.1 %id)
DW466454 Liver .c 42 to 375 18 to 352 K17*     335/352
(95 %)
12 diff
(96.6 %id)
EH041835   .c 42 to 404 364 to 1 N19H D59G Y60L E61*   Submitted on the opposite strand 364/602
(60 %)
4 diff
(99.4 %id)
BP263842 small intestine .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
CB107673 Liver .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
CB109578 Liver .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
CB108812 Liver .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP296303   .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP296304   .c 42 to 448 1 to 408 H54T V55X L57M L70T Y71L ...     408/485
(84 %)
9 diff
(98.2 %id)
BP307354 brain .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP308431 brain .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BP316436 pericardium .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BP316903 pericardium .c 42 to 448 1 to 407 D22G AAA   407/407
(100 %)
1 diff
(99.8 %id)
BP317706 pericardium .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP317895 pericardium .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BP318993 pericardium .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BM842061 lymph node, stomach .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BP370058 testis .c 42 to 448 1 to 407 exact     407/439
(92 %)
1 diff
(99.8 %id)
BP370202 testis .c 42 to 448 1 to 407 exact AAA   407/407
(100 %)
3 diff
(99.3 %id)
BP373087 umbilical cord .c 42 to 447 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BQ276515 mixed (pool of 40 RNAs) .c 43 to 446 1 to 404 exact     404/405
(99 %)
5 diff
(98.8 %id)
BU588868 mixed (pool of 40 RNAs) .c 43 to 442 1 to 400 K52N V55A     400/1104
(36 %)
9 diff
(99.2 %id)
BU596735 mixed (pool of 40 RNAs) .c 43 to 445 1 to 403 exact     403/440
(91 %)
4 diff
(99.1 %id)
BU599123 mixed (pool of 40 RNAs) .c 43 to 448 1 to 406 exact     406/825
(49 %)
4 diff
(99.6 %id)
BU532505 mixed (pool of 40 RNAs) .c 43 to 447 1 to 405 E69Q     405/442
(91 %)
6 diff
(98.7 %id)
BU533925 mixed (pool of 40 RNAs) .c 43 to 450 1 to 408 exact     408/444
(91 %)
4 diff
(99.1 %id)
BU535098 mixed (pool of 40 RNAs) .c 43 to 450 1 to 408 exact     408/439
(92 %)
8 diff
(98.2 %id)
BU851999 mixed (pool of 40 RNAs) .c 43 to 447 1 to 405 exact     405/442
(91 %)
4 diff
(99.1 %id)
BU958341 mixed (pool of 40 RNAs) .c 43 to 436 1 to 394 exact AAA   394/394
(100 %)
3 diff
(99.3 %id)
CB113860 Liver .c 43 to 448 1 to 406 T37S AAA   406/406
(100 %)
3 diff
(99.3 %id)
BM784424 stomach .c 43 to 448 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BM887694 eye .c 44 to 447 1 to 404 exact AAA   404/404
(100 %)
1 diff
(99.8 %id)
AA316722 colon .c 44 to 448 1 to 405 exact     405/405
(100 %)
0 diff
(100 %id)
AJ707686 heart .c 44 to 449 1 to 406 exact AAA   406/406
(100 %)
2 diff
(99.6 %id)
CN256886 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 44 to 447 1 to 404 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BP308829 brain .c 44 to 447 1 to 404 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BG943090 blood .c 45 to 386 1 to 342 exact     342/342
(100 %)
1 diff
(99.8 %id)
BX473784   .c 45 to 448 1 to 404 exact AAA   404/404
(100 %)
1 diff
(99.8 %id)
BF673590 Prostate .c 45 to 446 1 to 402 Q34P AAA   402/402
(100 %)
3 diff
(99.3 %id)
BG434227 placenta .c 45 to 446 1 to 401 exact     401/702
(57 %)
4 diff
(99.5 %id)
CB107647 Liver .c 45 to 449 1 to 405 exact AAA   405/405
(100 %)
0 diff
(100 %id)
AA301822 aorta .c 46 to 297 1 to 254       254/256
(99 %)
3 diff
(98.9 %id)
BQ306851 breast .c 46 to 446 35 to 433 G11X AAA   399/433
(92 %)
6 diff
(98.7 %id)
DW440922 Liver .c 46 to 411 18 to 382 exact     365/382
(95 %)
7 diff
(98.2 %id)
DW464921 Liver .c 46 to 389 18 to 361 E69K     344/361
(95 %)
9 diff
(97.6 %id)
DW467236 Liver .c 46 to 375 18 to 347 D53E Q73H     330/347
(95 %)
8 diff
(97.7 %id)
DB508856 testis .c 46 to 446 1 to 401 E3*   Submitted on the opposite strand 401/403
(99 %)
22 diff
(94.6 %id)
DB519308 testis .c 46 to 448 16 to 418 exact   Submitted on the opposite strand 403/418
(96 %)
11 diff
(97.4 %id)
DB537154 hippocampus .c 46 to 448 21 to 423 V43F AAA Submitted on the opposite strand 403/423
(95 %)
7 diff
(98.4 %id)
AV726190 hypothalamus .c 46 to 451 1 to 406 exact AAA   406/406
(100 %)
1 diff
(99.8 %id)
R89203.
matches multiple genes
liver and spleen .c 46 to 447 1 to 408 exact   also hits gene LOC100287215 408/411
(99 %)
7 diff
(98.3 %id)
AA293612 ovarian tumor, ovary .c 46 to 416 18 to 388 exact     371/388
(95 %)
8 diff
(98.0 %id)
AW247693 lung, small cell carcinoma .c 46 to 448 1 to 403 exact AAA   403/403
(100 %)
4 diff
(99.1 %id)
BE737738 brain, glioblastoma .c 46 to 440 1 to 395 exact     395/662
(59 %)
3 diff
(99.6 %id)
BE738497 brain, glioblastoma .c 46 to 377 330 to 1 exact     330/330
(100 %)
2 diff
(99.4 %id)
BG059174 nasopharynx, normal epithelium .c 46 to 447 1 to 402 exact AAA   402/402
(100 %)
0 diff
(100 %id)
TI_44169429   .c 46 to 448 99 to 501 exact     403/953
(42 %)
7 diff
(99.3 %id)
BP291242 lung .c 46 to 447 1 to 402 G25F A32F A33C Q34E V55L ...     402/552
(72 %)
14 diff
(97.5 %id)
BP303931   .c 46 to 448 1 to 403 exact AAA   403/403
(100 %)
0 diff
(100 %id)
AU310688 neuroblastoma .c 46 to 449 1 to 404 exact     404/404
(100 %)
0 diff
(100 %id)
BP318315 pericardium .c 46 to 449 1 to 404 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BM835427 stomach .c 46 to 448 1 to 403 exact AAA   403/403
(100 %)
0 diff
(100 %id)
BP348380 brain .c 46 to 450 1 to 405 A33S K52N     405/583
(69 %)
6 diff
(99.0 %id)
BP373947 umbilical cord .c 46 to 448 1 to 404 V16C K17*     404/582
(69 %)
2 diff
(99.7 %id)
BX117102 liver and spleen .c 47 to 448 1 to 402 exact AAA   402/402
(100 %)
0 diff
(100 %id)
DW463829 Liver .c 47 to 144 13 to 110       98/110
(89 %)
6 diff
(94.6 %id)
TI_57217104   .c 47 to 448 30 to 431 exact AAA   402/737
(54 %)
7 diff
(99.1 %id)
DN991195 brain, whole brain .c 47 to 447 1 to 401 exact AAA   401/401
(100 %)
4 diff
(99.1 %id)
AA321070 adipose tissue, brown .c 48 to 261 1 to 214       214/220
(97 %)
1 diff
(99.6 %id)
DB443923 testis .c 48 to 446 1 to 399 L30P     399/442
(90 %)
2 diff
(99.6 %id)
DB453853 testis .c 48 to 448 1 to 401 exact     401/401
(100 %)
0 diff
(100 %id)
DB469559 hippocampus .c 48 to 448 1 to 401 exact AAA   401/401
(100 %)
0 diff
(100 %id)
T30842 adipose .c 48 to 431 385 to 1 T35X     385/386
(99 %)
2 diff
(99.5 %id)
BP224751   .c 49 to 452 1 to 404 exact AAA   404/404
(100 %)
1 diff
(99.8 %id)
FN097932 breast carcinoma .c 49 to 150 99 to 1     Submitted on the opposite strand 99/100
(99 %)
3 diff
(97.0 %id)
BU540226 mixed (pool of 40 RNAs) .c 49 to 447 1 to 399 exact     399/434
(91 %)
4 diff
(99.1 %id)
BG498773 adenocarcinoma, Prostate .c 51 to 445 1 to 423 I2X E3G D59A Y60T E61M ...     407/455
(89 %)
30 diff
(93.5 %id)
BG687421 lung, mucoepidermoid carcinoma .c 51 to 448 1 to 399 exact AAA   399/399
(100 %)
2 diff
(99.5 %id)
BM510539 insulinoma, Pancreas .c 51 to 448 405 to 8 exact     398/622
(63 %)
1 diff
(99.9 %id)
BM510689 insulinoma, Pancreas .c 51 to 448 405 to 8 exact     398/549
(72 %)
1 diff
(99.9 %id)
BP259190 heart .c 52 to 445 1 to 394 exact     394/568
(69 %)
3 diff
(99.5 %id)
CD523456 pooled .c 52 to 448 1 to 397 exact     397/452
(87 %)
1 diff
(99.8 %id)
AJ705290 bone marrow .c 53 to 448 1 to 396 exact     396/397
(99 %)
1 diff
(99.8 %id)
BY796455 eye .c 53 to 448 1 to 396 exact     396/397
(99 %)
1 diff
(99.8 %id)
BE336891.
matches multiple genes
adenocarcinoma cell line, ovary .c 53 to 431 1 to 379 exact   also hits gene UBE2G2 379/379
(100 %)
0 diff
(100 %id)
BI755366 brain .c 53 to 448 1 to 396 exact AAA   396/396
(100 %)
0 diff
(100 %id)
BG944627 blood .c 54 to 358 1 to 305 exact     305/305
(100 %)
0 diff
(100 %id)
ES310554 scalp interfollicular dermis, skin .c 54 to 448 1 to 395 exact AAA   395/395
(100 %)
0 diff
(100 %id)
BP196045 adrenal gland .c 55 to 448 1 to 394 exact AAA   394/394
(100 %)
0 diff
(100 %id)
AF313915   .c 55 to 448 1 to 394 exact AAA   394/394
(100 %)
5 diff
(98.8 %id)
AA480469   .c 55 to 346 1 to 292 I50V Y60*     292/292
(100 %)
10 diff
(96.6 %id)
AW954688   .c 56 to 442 1 to 387 E69D     387/387
(100 %)
5 diff
(98.8 %id)
BM309995 insulinoma, Pancreas .c 56 to 448 1 to 393 exact AAA   393/393
(100 %)
5 diff
(98.8 %id)
BM876552 insulinoma, Pancreas .c 56 to 448 1 to 393 exact AAA   393/393
(100 %)
5 diff
(98.8 %id)
BU589166 mixed (pool of 40 RNAs) .c 56 to 449 1 to 394 exact     394/429
(91 %)
4 diff
(99.1 %id)
BU533694 mixed (pool of 40 RNAs) .c 56 to 447 1 to 392 exact     392/939
(41 %)
4 diff
(99.6 %id)
BU861072 mixed (pool of 40 RNAs) .c 56 to 448 1 to 393 exact     393/398
(98 %)
4 diff
(99.0 %id)
BU861282 mixed (pool of 40 RNAs) .c 56 to 446 1 to 392 R38P W39L N40E K41Q I42D ...     392/430
(91 %)
6 diff
(98.7 %id)
CD251388 brain, Pituitary .c 56 to 324 1 to 270       270/271
(99 %)
2 diff
(99.3 %id)
BE393632 endometrium, adenocarcinoma cell line, uterus .c 57 to 449 1 to 393 exact AAA   393/393
(100 %)
0 diff
(100 %id)
BE620501 large cell carcinoma, undifferentiated, lung .c 57 to 454 1 to 397 exact AAA   397/397
(100 %)
3 diff
(99.3 %id)
BE620900 large cell carcinoma, undifferentiated, lung .c 57 to 399 343 to 2 N19T T20R D21M D22I T23P ...     342/343
(99 %)
1 diff
(99.8 %id)
CA502897 Human Lung Epithelial cells, lung .c 57 to 448 410 to 19 exact AAA   392/392
(100 %)
0 diff
(100 %id)
BF540944 hypernephroma, Kidney .c 58 to 446 1 to 389 exact AAA   389/389
(100 %)
1 diff
(99.8 %id)
BM912400 amelanotic melanoma, cell line, skin .c 58 to 449 451 to 59 exact AAA Submitted on the opposite strand 393/1196
(32 %)
4 diff
(99.7 %id)
BM921396 pooled brain, lung, testis .c 58 to 448 108 to 498 exact AAA   391/475
(82 %)
6 diff
(98.8 %id)
AA304694 aorta .c 59 to 366 1 to 311 L10X V16X T49R I50F F51X ...     311/313
(99 %)
7 diff
(97.8 %id)
BP198583 adrenal gland .c 59 to 448 1 to 390 exact AAA   390/390
(100 %)
0 diff
(100 %id)
DW435246 Liver .c 59 to 297 18 to 256       239/256
(93 %)
6 diff
(97.7 %id)
DW440370 Liver .c 59 to 429 18 to 388 exact     371/388
(95 %)
6 diff
(98.5 %id)
AA761185 germinal center B cell .c 59 to 448 401 to 12 exact AAA   390/395
(98 %)
1 diff
(99.8 %id)
BU787896 insulinoma, Pancreas .c 59 to 448 8 to 397 exact     390/397
(98 %)
6 diff
(98.5 %id)
CD110417 Blood vessels - aorta, basilar and artery .c 59 to 453 1 to 396 K45N     396/850
(46 %)
10 diff
(98.9 %id)
T32179 brain .c 59 to 311 1 to 253       253/253
(100 %)
2 diff
(99.3 %id)
BM687389 eye, optic nerve .c 59 to 443 9 to 393 exact fully sequenced,   385/393
(97 %)
6 diff
(98.5 %id)
BG027098 Bone, osteosarcoma, cell line .c 60 to 448 1 to 389 exact AAA   389/389
(100 %)
0 diff
(100 %id)
TI_59392257   .c 60 to 448 116 to 503 V5F C6A N7T D8T R9V ... tiling clone, AAA   388/388
(100 %)
1 diff
(99.8 %id)
DW408474 Liver .c 61 to 391 13 to 343 exact     331/343
(96 %)
9 diff
(97.4 %id)
DW432214 Liver .c 61 to 317 9 to 266       258/266
(96 %)
10 diff
(96.3 %id)
EC541763 Prostate .c 61 to 165 1 to 105       105/105
(100 %)
0 diff
(100 %id)
EC549362 Prostate .c 61 to 163 1 to 102       102/105
(97 %)
2 diff
(98.1 %id)
BM014264 breast, mammary adenocarcinoma, cell line .c 61 to 448 1 to 387 V5F C6A N7T D8T R9V ... AAA   387/387
(100 %)
1 diff
(99.8 %id)
BU536083 mixed (pool of 40 RNAs) .c 61 to 449 1 to 389 exact     389/855
(45 %)
4 diff
(99.6 %id)
BM310272 insulinoma, Pancreas .c 62 to 431 370 to 1 exact     370/375
(98 %)
0 diff
(100 %id)
BF343423 brain, glioblastoma with EGFR amplification .c 62 to 448 25 to 414 exact     390/866
(45 %)
15 diff
(98.3 %id)
BM876291 insulinoma, Pancreas .c 62 to 448 405 to 19 exact AAA   387/392
(98 %)
0 diff
(100 %id)
CK824065 insulinoma, Pancreas .c 62 to 414 353 to 1 exact     353/358
(98 %)
0 diff
(100 %id)
BQ421216 large cell carcinoma, lung .c 62 to 447 1 to 386 exact     386/402
(96 %)
1 diff
(99.8 %id)
BM703541 eye, human retina .c 62 to 447 1 to 386 exact AAA   386/386
(100 %)
0 diff
(100 %id)
BM715291 eye, human retina .c 62 to 447 1 to 386 exact AAA   386/386
(100 %)
0 diff
(100 %id)
AA385328 thyroid gland .c 63 to 339 1 to 279       279/282
(98 %)
4 diff
(98.6 %id)
EC459454 Prostate .c 63 to 169 1 to 108       108/108
(100 %)
5 diff
(95.4 %id)
BQ221631 epithelioid carcinoma, Pancreas .c 64 to 447 1 to 384 exact AAA   384/384
(100 %)
0 diff
(100 %id)
BG942140 blood .c 65 to 448 1 to 384 G11R     384/399
(96 %)
3 diff
(99.3 %id)
CN256880 embryonic stem cells, DMSO-treated H9 cellline .c 65 to 448 1 to 384 exact AAA   384/384
(100 %)
0 diff
(100 %id)
CN256881 embryonic stem cells, DMSO-treated H9 cellline .c 65 to 440 1 to 376 exact     376/376
(100 %)
0 diff
(100 %id)
AW516518 ovary, papillary serous ovarian metastasis .c 65 to 451 15 to 401 exact   Submitted on the opposite strand 387/404
(95 %)
6 diff
(98.6 %id)
BE567125 bladder, carcinoma, cell line .c 65 to 435 1 to 375 K17N C18A N19T T20R D21M ...     375/979
(38 %)
13 diff
(98.7 %id)
BF028555 bladder, carcinoma, cell line .c 65 to 449 1 to 386 Q34P T35N G36W T37Y R38P ... AAA   386/386
(100 %)
2 diff
(99.5 %id)
BQ670774 epidermoid carcinoma, cell line, salivary gland .c 65 to 447 1 to 383 Y72L Q73S     383/403
(95 %)
9 diff
(97.8 %id)
AA502036 liposarcoma .c 66 to 425 1 to 360 exact     360/360
(100 %)
5 diff
(98.7 %id)
AI709082 aorta .c 66 to 448 383 to 1 D26G T49P H63P     383/384
(99 %)
9 diff
(97.7 %id)
BM453090 leiomyosarcoma, uterus .c 66 to 449 1 to 384 exact     384/1066
(36 %)
2 diff
(99.9 %id)
EC493724 Prostate .c 67 to 169 10 to 111       100/111
(90 %)
9 diff
(91.9 %id)
BU590149 mixed (pool of 40 RNAs) .c 67 to 449 1 to 383 exact     383/383
(100 %)
2 diff
(99.5 %id)
BU927967 mixed (pool of 40 RNAs) .c 67 to 450 1 to 385 K41E T49S     385/423
(91 %)
5 diff
(98.9 %id)
BU941885 mixed (pool of 40 RNAs) .c 67 to 447 1 to 381 exact     381/383
(99 %)
2 diff
(99.5 %id)
CD520195 pooled .c 67 to 449 1 to 386 E3G R15G K17V N19M T20Q ...     383/394
(97 %)
11 diff
(97.3 %id)
N39461 placenta .c 68 to 421 1 to 355 I50N K52*     355/355
(100 %)
2 diff
(99.5 %id)
BQ441598 bone marrow, from acute myelogenous leukemia .c 68 to 449 1 to 382 exact     382/382
(100 %)
1 diff
(99.8 %id)
F22069 pectoral muscle (after mastectomy) .c 69 to 414 1 to 349 D21G D22*     349/361
(96 %)
10 diff
(97.3 %id)
AA035242 uterus .c 69 to 447 382 to 1 T35N G36W T37Y R38P W39L ...     382/382
(100 %)
3 diff
(99.3 %id)
AA081027   .c 69 to 447 26 to 412 I50X K52* fully sequenced,   359/384
(93 %)
19 diff
(95.1 %id)
BE880515 large cell carcinoma, undifferentiated, lung .c 69 to 448 1 to 381 exact AAA   381/381
(100 %)
1 diff
(99.8 %id)
AA308501 colon .c 70 to 260 1 to 191       191/198
(96 %)
2 diff
(99.0 %id)
AI973019 Prostate .c 70 to 448 379 to 1 exact     379/379
(100 %)
0 diff
(100 %id)
CB112728 Liver .c 70 to 446 1 to 377 exact     377/377
(100 %)
1 diff
(99.8 %id)
BP378339 uterus .c 70 to 448 1 to 379 exact AAA   379/379
(100 %)
0 diff
(100 %id)
AJ713946 bone marrow .c 71 to 445 1 to 375 exact     375/375
(100 %)
0 diff
(100 %id)
AW951730   .c 71 to 449 1 to 379 exact     379/449
(84 %)
4 diff
(99.2 %id)
AV733393 pheochromocytoma .c 71 to 449 1 to 379 exact AAA   379/379
(100 %)
0 diff
(100 %id)
AV718256 hypothalamus .c 71 to 447 1 to 377 exact AAA   377/377
(100 %)
0 diff
(100 %id)
BF082399 breast_normal .c 72 to 437 16 to 379 I2D E3R V4G V5C C6S ...     364/379
(96 %)
10 diff
(97.4 %id)
AV758359 bone marrow .c 72 to 449 18 to 387 V5G C6N N7D D8R R9L ... AAA   374/387
(96 %)
18 diff
(95.4 %id)
W57656.
matches multiple genes
heart .c 72 to 444 1 to 381 exact   also hits gene FABP4 381/411
(92 %)
14 diff
(96.6 %id)
AA128770   .c 72 to 447 29 to 403 A33X Q34K T35L G36V T37P ... fully sequenced, AAA   375/403
(93 %)
18 diff
(95.6 %id)
AA505959 breast .c 72 to 448 377 to 1 exact     377/377
(100 %)
10 diff
(97.4 %id)
AW004852 colon .c 72 to 447 380 to 4 C6M N7Q D8R R9P L10S ...     377/380
(99 %)
5 diff
(98.7 %id)
CB054620.
matches multiple genes
brain, glioblastoma (pooled) .c 72 to 448 1 to 377 D8L AAA also hits gene LOC100287215 377/377
(100 %)
7 diff
(98.2 %id)
BM668765 eye, Retina Foveal and Macular .c 72 to 448 395 to 19 exact AAA   377/386
(97 %)
0 diff
(100 %id)
TI_151765730   .c 72 to 448 93 to 470 exact     378/799
(47 %)
7 diff
(99.2 %id)
EC445062 Prostate .c 73 to 169 18 to 114       97/114
(85 %)
6 diff
(94.8 %id)
BE267264 lung, small cell carcinoma .c 73 to 448 1 to 375 exact     375/375
(100 %)
1 diff
(99.8 %id)
AJ574549 pectoral muscle (after mastectomy) .c 74 to 446 9 to 383 C6*     375/391
(95 %)
15 diff
(96.2 %id)
AI301029 2 pooled tumors (clear cell type), Kidney .c 74 to 449 381 to 6 exact     376/381
(98 %)
0 diff
(100 %id)
AI373016 anaplastic oligodendroglioma, brain .c 74 to 450 389 to 13 H63P AAA   377/377
(100 %)
2 diff
(99.5 %id)
BE263378 lung, small cell carcinoma .c 74 to 448 1 to 373 V5C C6G I31M A32Q A33P ...     373/373
(100 %)
6 diff
(98.4 %id)
AW275727 normal squamous epithelium, tongue .c 75 to 452 9 to 386 exact AAA Submitted on the opposite strand 378/386
(97 %)
10 diff
(97.5 %id)
F19333 pectoral muscle (after mastectomy) .c 75 to 448 1 to 374 exact     374/375
(99 %)
1 diff
(99.8 %id)
BE206642 adenocarcinoma cell line, ovary .c 76 to 448 383 to 11 E3K Y72H Q73P AAA   373/373
(100 %)
9 diff
(97.6 %id)
T34355 prostate gland .c 77 to 367 1 to 291 T49R I50F     291/291
(100 %)
2 diff
(99.4 %id)
AJ707990 heart .c 78 to 448 1 to 371 exact AAA   371/371
(100 %)
3 diff
(99.2 %id)
CR606232 Placenta Cot 25-normalized .c 79 to 447 1 to 369 exact     369/369
(100 %)
0 diff
(100 %id)
BX381808.
matches multiple genes
Placenta Cot 25-normalized .c 79 to 447 1 to 370 I50X K52*   also hits gene LOC100287215 370/370
(100 %)
1 diff
(99.8 %id)
D31544   .c 79 to 407 1 to 329 T49R I50F     329/329
(100 %)
2 diff
(99.4 %id)
BQ436266 epithelioid carcinoma, Pancreas .c 79 to 448 1 to 370 exact AAA   370/370
(100 %)
0 diff
(100 %id)
TI_149272558   .c 79 to 448 126 to 495 exact AAA Submitted on the opposite strand 370/495
(74 %)
7 diff
(98.6 %id)
BU675159 lung, Primary Lung Epithelial Cells .c 79 to 448 17 to 386 exact AAA Submitted on the opposite strand 370/372
(99 %)
8 diff
(97.9 %id)
BP389739 pancreatic islet .c 80 to 448 19 to 387 T49P   Submitted on the opposite strand 369/374
(98 %)
6 diff
(98.4 %id)
W30911 senescent fibroblast .c 80 to 438 1 to 361 I50T K52* fully sequenced,   361/361
(100 %)
6 diff
(98.4 %id)
F24037 pectoral muscle (after mastectomy) .c 80 to 447 1 to 368 exact     368/376
(97 %)
1 diff
(99.8 %id)
W01264 liver and spleen .c 81 to 447 1 to 368 exact fully sequenced,   368/368
(100 %)
3 diff
(99.2 %id)
W07432 lung .c 81 to 426 1 to 348 exact fully sequenced,   348/348
(100 %)
3 diff
(99.2 %id)
W69222 heart .c 81 to 447 1 to 370 exact fully sequenced,   370/370
(100 %)
8 diff
(97.9 %id)
BE886443 leiomyosarcoma, uterus .c 81 to 448 1 to 368 exact     368/872
(42 %)
2 diff
(99.8 %id)
EC442992 Prostate .c 82 to 175 1 to 93       93/97
(95 %)
8 diff
(91.8 %id)
CD676888 eye, Trabecular meshwork .c 82 to 447 1 to 366 exact AAA   366/366
(100 %)
0 diff
(100 %id)
R98379 liver and spleen .c 82 to 447 1 to 367 E69G L70A Y71L Y72L Q73S fully sequenced,   367/367
(100 %)
2 diff
(99.5 %id)
BP430701   .c 82 to 386 1 to 305 exact     305/305
(100 %)
3 diff
(99.1 %id)
AA642858 alveolar rhabdomyosarcoma .c 83 to 448 8 to 373 T20K AAA   366/373
(98 %)
7 diff
(98.2 %id)
F31392 pectoral muscle (after mastectomy) .c 83 to 225 1 to 143       143/143
(100 %)
2 diff
(98.7 %id)
EC539496 Prostate .c 84 to 175 1 to 91       91/97
(93 %)
2 diff
(98.0 %id)
AI193781 lung .c 84 to 449 367 to 2 exact     366/367
(99 %)
0 diff
(100 %id)
AI205784   .c 84 to 448 369 to 7 V5F C6A N7T D8T R9V ...     363/369
(98 %)
2 diff
(99.5 %id)
AI074416 senescent fibroblast .c 85 to 448 370 to 7 exact     364/370
(98 %)
0 diff
(100 %id)
AI369744 anaplastic oligodendroglioma, brain .c 86 to 448 363 to 1 exact     363/363
(100 %)
0 diff
(100 %id)
CN256885 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 87 to 448 1 to 362 exact AAA   362/362
(100 %)
0 diff
(100 %id)
BC110839 Uterus, leiomyosarcoma .c 88 to 447 1 to 360 exact AAA   360/360
(100 %)
0 diff
(100 %id)
ES315537 occipital scalp hair, skin .c 89 to 272 1 to 183       183/183
(100 %)
2 diff
(99.0 %id)
AA622015 colon, colon tumor RER+ .c 89 to 447 360 to 2 exact     359/360
(99 %)
0 diff
(100 %id)
AI479908 anaplastic oligodendroglioma, brain .c 89 to 447 359 to 1 exact     359/359
(100 %)
0 diff
(100 %id)
BQ924266 leiomyosarcoma, uterus .c 90 to 447 1 to 358 exact     358/1439
(24 %)
2 diff
(99.9 %id)
BF172852 blood .c 91 to 361 1 to 272 V14A R38P W39L I50N K52*     272/272
(100 %)
7 diff
(97.5 %id)
AI719663 aorta .c 91 to 448 363 to 4 R38P W39V N40G K41T I42R ...     360/363
(99 %)
1 diff
(99.8 %id)
BM693246.
matches multiple genes
eye, Retina Foveal and Macular .c 91 to 448 1 to 358 exact AAA also hits gene LOC100287215 358/358
(100 %)
0 diff
(100 %id)
AA572821   .c 92 to 336 58 to 302       245/302
(81 %)
6 diff
(98.1 %id)
BG178022 adenocarcinoma, cell line, Prostate .c 92 to 448 1 to 357 R15H AAA   357/357
(100 %)
1 diff
(99.8 %id)
AA573301 breast .c 93 to 446 354 to 1 exact     354/354
(100 %)
2 diff
(99.5 %id)
R30686   .c 95 to 346 1 to 252 T23P T49K     252/252
(100 %)
3 diff
(98.9 %id)
AA927506 pooled germ cell tumors .c 95 to 448 354 to 1 exact     354/354
(100 %)
0 diff
(100 %id)
AI719437 colon .c 95 to 447 353 to 1 exact     353/353
(100 %)
0 diff
(100 %id)
AA307500 aorta .c 96 to 429 1 to 338 L10X T49R I50F F51L K52R ...     338/338
(100 %)
6 diff
(98.3 %id)
AI301695 2 pooled tumors (clear cell type), Kidney .c 97 to 448 362 to 11 exact AAA   352/354
(99 %)
0 diff
(100 %id)
AA852606 Bone, Hip .c 97 to 398 304 to 3 exact     302/304
(99 %)
0 diff
(100 %id)
AA226339   .c 98 to 447 18 to 369 I50X K52*     352/377
(93 %)
8 diff
(97.9 %id)
AA861810   .c 98 to 447 359 to 10 exact     350/359
(97 %)
0 diff
(100 %id)
AI885213 anaplastic oligodendroglioma, brain .c 98 to 448 353 to 2 D26G L27P K28*     352/353
(99 %)
1 diff
(99.8 %id)
BE744309 adenocarcinoma cell line, ovary .c 98 to 451 1 to 353 exact     353/358
(98 %)
2 diff
(99.5 %id)
AI282165 lung .c 99 to 448 348 to 1 I2D D8A R9V L10W K12R ...     348/348
(100 %)
2 diff
(99.5 %id)
AA358416 lung .c 100 to 333 1 to 235       235/235
(100 %)
3 diff
(98.8 %id)
AI097113 brain, glioblastoma (pooled) .c 102 to 447 348 to 3 exact     346/348
(99 %)
0 diff
(100 %id)
BE858122 brain, glioblastoma (pooled) .c 102 to 447 346 to 1 exact     346/346
(100 %)
0 diff
(100 %id)
CF129287 Chondrosarcoma Lung Metastasis cell lines, lung .c 103 to 449 1 to 347 exact AAA   347/347
(100 %)
2 diff
(99.5 %id)
TI_154190969   .c 103 to 449 51 to 397 exact AAA   347/347
(100 %)
2 diff
(99.5 %id)
AA226340   .c 106 to 447 365 to 24 exact     342/365
(93 %)
0 diff
(100 %id)
AA011251 heart .c 107 to 429 7 to 337 D21G D22* fully sequenced,   331/337
(98 %)
17 diff
(95.0 %id)
AA635460 normal prostate, Prostate .c 107 to 448 341 to 1 K12R K13R V14S R15A V16L ...     341/348
(97 %)
1 diff
(99.8 %id)
AA935727 carcinoid, lung .c 107 to 448 345 to 4 G11A W47R     342/351
(97 %)
2 diff
(99.5 %id)
AA935732 carcinoid, lung .c 107 to 448 345 to 4 G11V W47R     342/351
(97 %)
2 diff
(99.5 %id)
F32365 pectoral muscle (after mastectomy) .c 107 to 435 7 to 335 G11V K13N G58V     329/335
(98 %)
7 diff
(98.0 %id)
AA659132 alveolar rhabdomyosarcoma .c 108 to 448 13 to 353 N67S     341/357
(95 %)
9 diff
(97.5 %id)
AA127824 uterus .c 111 to 447 343 to 1 I2E E3R V4R V5L C6F ...     343/409
(83 %)
7 diff
(98.3 %id)
AA977268 2 pooled tumors (clear cell type), Kidney .c 112 to 448 340 to 4 exact     337/340
(99 %)
0 diff
(100 %id)
AI299261 2 pooled tumors (clear cell type), Kidney .c 112 to 448 342 to 6 exact     337/342
(98 %)
0 diff
(100 %id)
AA927717 pooled germ cell tumors .c 114 to 448 338 to 4 exact     335/338
(99 %)
0 diff
(100 %id)
AI096433 brain, glioblastoma (pooled) .c 114 to 448 348 to 14 exact AAA   335/335
(100 %)
0 diff
(100 %id)
F36879 pectoral muscle (after mastectomy) .c 114 to 433 1 to 320 N7I D8Y R9F T20R     320/320
(100 %)
6 diff
(98.2 %id)
BU729505 eye, human retina .c 114 to 447 353 to 20 exact AAA   334/334
(100 %)
0 diff
(100 %id)
AI299205 carcinoid, lung .c 115 to 448 344 to 11 exact AAA   334/334
(100 %)
1 diff
(99.8 %id)
AI590079 anaplastic oligodendroglioma, brain .c 115 to 447 336 to 4 exact     333/336
(99 %)
0 diff
(100 %id)
AW162386 brain, frontal lobe .c 116 to 447 343 to 11 R9C R15C T37N R38L W39L ... AAA   333/333
(100 %)
10 diff
(97.0 %id)
BG941293 blood .c 117 to 448 368 to 37 L10M T49P H63P AAA   332/332
(100 %)
8 diff
(97.6 %id)
CN256884 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 117 to 444 1 to 328 exact     328/328
(100 %)
0 diff
(100 %id)
BT007355   .c 120 to 341 1 to 222 exact     222/222
(100 %)
0 diff
(100 %id)
CV027416 mixed .c 120 to 340 1 to 221       221/372
(59 %)
1 diff
(99.8 %id)
AA908418 ovary, serous adenocarcinoma .c 120 to 336 217 to 1       217/217
(100 %)
4 diff
(98.2 %id)
AA862695 pooled germ cell tumors .c 120 to 447 330 to 3 exact     328/330
(99 %)
0 diff
(100 %id)
AA910891 carcinoid, lung .c 120 to 447 328 to 1 exact     328/328
(100 %)
0 diff
(100 %id)
AA931480 Kidney .c 120 to 336 217 to 1       217/217
(100 %)
4 diff
(98.2 %id)
AA962130 pooled germ cell tumors .c 120 to 336 217 to 1       217/217
(100 %)
13 diff
(94.1 %id)
AA996068 breast .c 120 to 336 217 to 1       217/217
(100 %)
2 diff
(99.1 %id)
AI087422 senescent fibroblast .c 120 to 448 353 to 25 exact AAA   329/329
(100 %)
1 diff
(99.7 %id)
AI148886 placenta .c 120 to 336 217 to 1       217/217
(100 %)
16 diff
(92.7 %id)
AI277191 placenta .c 120 to 447 333 to 6 V4G C6A N7T D8T R9X ...     328/333
(98 %)
9 diff
(97.3 %id)
AI288435 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 120 to 448 337 to 9 exact     329/337
(97 %)
0 diff
(100 %id)
AI467821 pooled .c 120 to 336 217 to 1       217/217
(100 %)
10 diff
(95.4 %id)
AI445120 colon, moderately-differentiated adenocarcinoma .c 120 to 336 217 to 1       217/217
(100 %)
1 diff
(99.6 %id)
AI758305 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 120 to 449 330 to 1 exact     330/330
(100 %)
0 diff
(100 %id)
AI867500 Prostate .c 120 to 449 330 to 1 exact     330/330
(100 %)
2 diff
(99.4 %id)
AI014448 breast .c 121 to 336 216 to 1       216/217
(99 %)
2 diff
(99.1 %id)
D11824 Liver .c 122 to 448 1 to 329     Submitted on the opposite strand 329/332
(99 %)
9 diff
(97.3 %id)
AA601890   .c 122 to 447 338 to 13   AAA   326/352
(92 %)
7 diff
(98.1 %id)
AA601928   .c 122 to 447 338 to 13   AAA   326/329
(99 %)
3 diff
(99.1 %id)
BE045228 normal epithelium, thyroid .c 122 to 335 1 to 214     Submitted on the opposite strand 214/214
(100 %)
8 diff
(96.3 %id)
AW583730 Islets of Langerhans, Pancreas .c 122 to 335 1 to 214       214/214
(100 %)
8 diff
(96.3 %id)
AA081028   .c 126 to 422 297 to 1   fully sequenced,   297/297
(100 %)
0 diff
(100 %id)
BQ921874 leiomyosarcoma, uterus .c 126 to 448 1 to 323   AAA   323/947
(34 %)
1 diff
(99.9 %id)
AA535582 invasive prostate tumor, Prostate .c 129 to 448 335 to 16   AAA   320/322
(99 %)
3 diff
(99.1 %id)
AI554628 anaplastic oligodendroglioma, brain .c 131 to 447 323 to 7       317/323
(98 %)
0 diff
(100 %id)
BU933716 mixed (pool of 40 RNAs) .c 131 to 448 1 to 318       318/325
(97 %)
3 diff
(99.1 %id)
AA514029 Ewing's sarcoma .c 133 to 447 326 to 12   AAA   315/315
(100 %)
2 diff
(99.4 %id)
AA535488 invasive prostate tumor, Prostate .c 134 to 448 339 to 25   AAA   315/319
(98 %)
3 diff
(99.1 %id)
BM702671 eye, Retina Foveal and Macular .c 136 to 448 1 to 313   AAA   313/313
(100 %)
0 diff
(100 %id)
BU729604 eye, Retina Foveal and Macular .c 136 to 448 331 to 19   AAA   313/322
(97 %)
0 diff
(100 %id)
BU733756 eye, Retina Foveal and Macular .c 136 to 448 331 to 19   AAA   313/322
(97 %)
0 diff
(100 %id)
BX472991   .c 138 to 411 1 to 274       274/274
(100 %)
2 diff
(99.3 %id)
AI266428 2 pooled tumors (clear cell type), Kidney .c 138 to 448 314 to 4       311/314
(99 %)
0 diff
(100 %id)
BQ304849 breast .c 140 to 404 1 to 265       265/265
(100 %)
8 diff
(97.0 %id)
BQ305032 breast .c 140 to 416 1 to 276       276/276
(100 %)
10 diff
(96.4 %id)
AA514433 colon .c 143 to 448 319 to 14   AAA   306/306
(100 %)
0 diff
(100 %id)
T64927 liver and spleen .c 145 to 448 305 to 3   fully sequenced,   303/305
(99 %)
2 diff
(99.4 %id)
R98380 liver and spleen .c 145 to 449 317 to 11   fully sequenced, AAA   307/307
(100 %)
0 diff
(100 %id)
N99973 senescent fibroblast .c 145 to 448 316 to 13   fully sequenced, AAA   304/304
(100 %)
0 diff
(100 %id)
AA010642 heart .c 145 to 447 303 to 1   fully sequenced,   303/303
(100 %)
0 diff
(100 %id)
AA128637   .c 145 to 422 279 to 1   fully sequenced,   279/279
(100 %)
0 diff
(100 %id)
CB218219 mandible, pooled .c 145 to 451 351 to 45   fully sequenced, AAA   307/307
(100 %)
1 diff
(99.7 %id)
BM671825 eye, optic nerve .c 145 to 449 323 to 19   fully sequenced, AAA   305/305
(100 %)
0 diff
(100 %id)
EC505177 Prostate .c 147 to 260 1 to 114       114/114
(100 %)
2 diff
(98.3 %id)
BF898606 marrow .c 148 to 445 1 to 298       298/298
(100 %)
0 diff
(100 %id)
T19184   .c 148 to 447 300 to 1     Submitted on the opposite strand 300/404
(74 %)
1 diff
(99.8 %id)
AA948196 carcinoid, lung .c 151 to 448 320 to 22   AAA   299/299
(100 %)
2 diff
(99.4 %id)
BF743095 breast .c 152 to 398 256 to 7     Submitted on the opposite strand 250/256
(97 %)
0 diff
(100 %id)
BG949452 breast .c 152 to 398 256 to 7       250/256
(97 %)
0 diff
(100 %id)
F27165 pectoral muscle (after mastectomy) .c 154 to 330 1 to 177       177/177
(100 %)
1 diff
(99.5 %id)
F29996 pectoral muscle (after mastectomy) .c 154 to 448 1 to 295       295/302
(97 %)
1 diff
(99.7 %id)
AI880263 colon .c 162 to 448 291 to 5       287/291
(98 %)
0 diff
(100 %id)
AI580758 pooled germ cell tumors .c 170 to 448 281 to 3       279/281
(99 %)
0 diff
(100 %id)
AA973995 pooled germ cell tumors .c 173 to 448 276 to 1       276/305
(90 %)
8 diff
(97.4 %id)
AA055001 heart .c 178 to 448 277 to 6       272/284
(95 %)
1 diff
(99.7 %id)
CB242938 Human Lung Epithelial cells, lung .c 180 to 448 287 to 19   AAA   269/269
(100 %)
0 diff
(100 %id)
AI879869 colon .c 187 to 448 265 to 4       262/265
(98 %)
0 diff
(100 %id)
CD518914 White Matter .c 189 to 449 7 to 267   AAA   261/267
(97 %)
8 diff
(97.1 %id)
CD556975 brain, Pituitary .c 192 to 449 1 to 258   AAA   258/258
(100 %)
0 diff
(100 %id)
AI141685 pooled germ cell tumors .c 198 to 448 259 to 9       251/259
(96 %)
0 diff
(100 %id)
AW964427   .c 207 to 448 1 to 242       242/397
(60 %)
1 diff
(99.8 %id)
T30691 Spleen .c 207 to 448 1 to 240       240/240
(100 %)
2 diff
(99.2 %id)
CD513996 brain, Pituitary .c 208 to 448 30 to 268   AAA   239/268
(89 %)
11 diff
(95.9 %id)
BM852102 stomach .c 212 to 408 1 to 197       197/197
(100 %)
0 diff
(100 %id)
AI468069 anaplastic oligodendroglioma, brain .c 213 to 448 237 to 1       237/237
(100 %)
3 diff
(98.8 %id)
FN129482 breast carcinoma .c 224 to 320 96 to 1     Submitted on the opposite strand 96/97
(98 %)
5 diff
(94.9 %id)
BE049525 adenocarcinoma, Pancreas .c 227 to 448 223 to 1       223/228
(97 %)
15 diff
(93.5 %id)
W69078 heart .c 229 to 454 227 to 2   fully sequenced,   226/227
(99 %)
0 diff
(100 %id)
BE833126 ovary .c 259 to 400 19 to 160       142/174
(81 %)
7 diff
(96.0 %id)
AA045468 uterus .c 263 to 448 186 to 1   fully sequenced,   186/186
(100 %)
0 diff
(100 %id)
BP385388 pancreatic islet .c 265 to 447 1 to 184     Submitted on the opposite strand 184/189
(97 %)
3 diff
(98.5 %id)
CD240463   .c 266 to 445 1 to 181       181/181
(100 %)
1 diff
(99.5 %id)
BU589274 mixed (pool of 40 RNAs) .c 290 to 442 3 to 155   AAA   153/155
(98 %)
0 diff
(100 %id)
BU590369 mixed (pool of 40 RNAs) .c 313 to 447 1 to 135       135/174
(77 %)
1 diff
(99.5 %id)
GD136153   .c 315 to 448 2 to 134       133/150
(88 %)
2 diff
(98.7 %id)
CA418471 Chondrosarcoma Grade II, Left Pelvis .c 316 to 454 157 to 19   AAA   139/148
(93 %)
1 diff
(99.4 %id)
F17340 pectoral muscle (after mastectomy) .c 332 to 448 1 to 117       117/119
(98 %)
1 diff
(99.2 %id)
N75848 lung .c 349 to 438 90 to 1   fully sequenced,   90/90
(100 %)
0 diff
(100 %id)
BM672522 eye, optic nerve .c 368 to 454 107 to 21   fully sequenced,   87/107
(81 %)
7 diff
(93.5 %id)
N70956 liver and spleen .c 374 to 447 104 to 31   fully sequenced, AAA   74/74
(100 %)
0 diff
(100 %id)
CN256882 embryonic stem cells, DMSO-treated H9 cellline .d 1 to 548 10 to 558 exact tiling clone,   549/558
(98 %)
12 diff
(97.9 %id)
CR590001 placenta .d 22 to 1471 1 to 1450 exact tiling clone,   1450/1450
(100 %)
0 diff
(100 %id)
AL542483 placenta .d 22 to 775 1 to 750 I50S K52* fully sequenced,   750/750
(100 %)
3 diff
(99.6 %id)
AL542482 placenta .d 745 to 1471 724 to 1   fully sequenced,   724/724
(100 %)
20 diff
(97.3 %id)
CD368878 Alveolar Macrophage, lung .d 788 to 1510 742 to 19   tiling clone, AAA   724/724
(100 %)
4 diff
(99.5 %id)
BF813274 colon_ins .d 881 to 1311 429 to 2     Submitted on the opposite strand 428/443
(96 %)
0 diff
(100 %id)
R23873 placenta .d 887 to 1303 1 to 424       424/429
(98 %)
9 diff
(98.0 %id)
AW151841 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 1143 to 1509 381 to 14   AAA   368/368
(100 %)
5 diff
(98.7 %id)
BF246041 brain, glioblastoma .e 1 to 313 9 to 321 exact tiling clone,   321/659
(48 %)
4 diff
(99.4 %id)
AK309258 cervix .f 1 to 950 1 to 950 N67S tiling clone,   950/950
(100 %)
1 diff
(99.9 %id)
DC344590 cervix .f 1 to 570 1 to 570 N67S     570/570
(100 %)
1 diff
(99.9 %id)
DB015485 esophageal, tumor tissue .g 1 to 569 5 to 573 exact tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BM921961 pooled brain, lung, testis .g 117 to 936 1 to 825 exact tiling clone,   825/1024
(80 %)
13 diff
(98.8 %id)
DA284587 corpus callosum .h-u 1 to 564 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
DA374273 thalamus .h-u 27 to 521 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DB129127 thymus .h-u 27 to 537 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
DA270424 caudate nucleus .h-u 30 to 560 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DC388999 Spleen .h-u 30 to 598 1 to 569   tiling clone,   569/569
(100 %)
1 diff
(99.9 %id)
DB105582 thymus .i 1 to 542 5 to 546 exact tiling clone, capped   545/546
(99 %)
1 diff
(99.9 %id)
BP375512 uterus .j 1 to 429 1 to 429 exact tiling clone, AAA   429/429
(100 %)
0 diff
(100 %id)
BP208533 cerebellum .j 29 to 429 1 to 401 exact AAA   401/401
(100 %)
1 diff
(99.8 %id)
CV573905 cornea, eye .j 44 to 429 1 to 386 exact AAA   386/386
(100 %)
0 diff
(100 %id)
AV715207   .k 1 to 307 1 to 307 exact tiling clone, AAA   307/307
(100 %)
1 diff
(99.7 %id)
DC340816 thalamus Gene UBL5, variant not shown              
BP235586 coronary artery Gene UBL5, variant not shown         Suspected internal deletion, this clone was ignored    
N95321 lung Gene UBL5, variant not shown         This clone was ignored    
W24587 lung Gene UBL5, variant not shown         This clone was ignored    
W72590 heart Gene UBL5, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
W76104 heart Gene UBL5, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AA282316 germinal center B cell Gene UBL5, variant not shown              
BM011925 brain, neuroblastoma, cell line Gene UBL5, variant not shown              
BU532362 mixed (pool of 40 RNAs) Gene UBL5, variant not shown         Suspected internal deletion, this clone was ignored    
BU959952 mixed (pool of 40 RNAs) Gene UBL5, variant not shown         Suspected internal deletion, this clone was ignored    
TI_59381111   Gene UBL5, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes I