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Gene UBE2ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
321 representative clones for gene UBE2A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR592668 T cells (Jurkat cell line) Cot10-normalized .a 1 to 1773 1 to 1773 exact tiling clone,   1773/1773
(100 %)
0 diff
(100 %id)
EC579091 Prostate .a 12 to 126 1 to 115       115/115
(100 %)
2 diff
(98.3 %id)
EC550238 Prostate .a 14 to 126 1 to 112       112/112
(100 %)
2 diff
(98.3 %id)
D28459 Fibrosarcoma .a 25 to 204 1 to 180       180/180
(100 %)
0 diff
(100 %id)
T80572 whole brain .a 55 to 439 1 to 387       387/534
(72 %)
11 diff
(98.0 %id)
R21355 whole brain .a 55 to 414 1 to 372       372/422
(88 %)
21 diff
(95.1 %id)
CR598158 Neuroblastoma Cot 25-normalized .a 60 to 1820 1 to 1761       1761/1761
(100 %)
0 diff
(100 %id)
CR600075 Placenta Cot 25-normalized .a 60 to 1800 1 to 1741       1741/1741
(100 %)
0 diff
(100 %id)
R20934 placenta .a 61 to 439 1 to 386       386/453
(85 %)
14 diff
(97.0 %id)
CR598456 Placenta Cot 25-normalized .a 66 to 1799 1 to 1734       1734/1734
(100 %)
0 diff
(100 %id)
CR603049 Placenta Cot 25-normalized .a 66 to 1789 1 to 1724       1724/1724
(100 %)
0 diff
(100 %id)
CR608682 HeLa cells Cot 25-normalized .a 66 to 1817 1 to 1752       1752/1752
(100 %)
0 diff
(100 %id)
CR622728 Placenta Cot 25-normalized .a 66 to 1789 1 to 1724       1724/1724
(100 %)
0 diff
(100 %id)
CR616784 Placenta Cot 25-normalized .a 73 to 1811 1 to 1739       1739/1739
(100 %)
0 diff
(100 %id)
CR621348 Placenta Cot 25-normalized .a 145 to 1815 1 to 1671       1671/1671
(100 %)
0 diff
(100 %id)
R20817 placenta .a 445 to 768 337 to 11       327/403
(81 %)
3 diff
(99.3 %id)
BQ006384 Chondrosarcoma, Left Pelvis .a 1254 to 1820 585 to 19   AAA   567/567
(100 %)
0 diff
(100 %id)
FN121231 breast carcinoma .a 1273 to 1374 102 to 1     Submitted on the opposite strand 102/102
(100 %)
0 diff
(100 %id)
AI191250 lung .a 1326 to 1829 504 to 1       504/504
(100 %)
0 diff
(100 %id)
BQ775045 Bone, Human Chondrosarcoma Cell Line .a 1336 to 1820 503 to 19   AAA   485/485
(100 %)
0 diff
(100 %id)
AA431855   .a 1337 to 1822 486 to 1     Submitted on the opposite strand 486/486
(100 %)
0 diff
(100 %id)
AW665283 pooled .a 1341 to 1819 495 to 17   AAA   479/479
(100 %)
0 diff
(100 %id)
BM264500 Pancreas, Purified pancreatic islet .a 1342 to 1822 481 to 1       481/481
(100 %)
0 diff
(100 %id)
AA988010 carcinoid, lung .a 1359 to 1828 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AA576025 breast, breast tumor .a 1369 to 1828 460 to 1       460/460
(100 %)
0 diff
(100 %id)
R46408 whole brain .a 1370 to 1827 489 to 10       480/494
(97 %)
0 diff
(100 %id)
AI609766 brain, glioblastoma (pooled) .a 1375 to 1828 454 to 1       454/454
(100 %)
0 diff
(100 %id)
AI391602 brain, glioblastoma (pooled) .a 1376 to 1823 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AI092957 heart .a 1377 to 1827 462 to 12   AAA   451/451
(100 %)
0 diff
(100 %id)
AI833298 colon .a 1380 to 1820 441 to 1       441/441
(100 %)
0 diff
(100 %id)
AI199790 placenta .a 1389 to 1824 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AI200647 placenta .a 1390 to 1820 444 to 14   AAA   431/431
(100 %)
0 diff
(100 %id)
AI346703 adenocarcinoma, colon .a 1391 to 1830 440 to 1       440/440
(100 %)
0 diff
(100 %id)
AA594270 colon, colon tumor RER+ .a 1392 to 1820 442 to 14   AAA   429/429
(100 %)
0 diff
(100 %id)
AA973073 pooled .a 1392 to 1820 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AI422441 brain, glioblastoma (pooled) .a 1396 to 1820 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI360469 pooled germ cell tumors .a 1404 to 1831 429 to 2       428/429
(99 %)
0 diff
(100 %id)
AA804394 germinal center B cell .a 1405 to 1820 427 to 12   AAA   416/416
(100 %)
0 diff
(100 %id)
EH339840   .a 1417 to 1506 1 to 90       90/90
(100 %)
0 diff
(100 %id)
AA804583 colon .a 1439 to 1820 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AI200452 placenta .a 1440 to 1822 383 to 1       383/383
(100 %)
0 diff
(100 %id)
AI200032 placenta .a 1441 to 1821 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AA894459 carcinoid, lung .a 1442 to 1778 1 to 337     Submitted on the opposite strand 337/337
(100 %)
0 diff
(100 %id)
R38873 whole brain .a 1450 to 1836 393 to 1       393/395
(99 %)
18 diff
(95.5 %id)
AA747564 germinal center B cell .a 1466 to 1827 371 to 10       362/371
(97 %)
0 diff
(100 %id)
BE349961 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 1468 to 1820 353 to 1       353/353
(100 %)
0 diff
(100 %id)
BG108896 retina, Retinal Pigment Epithelium sheets .a 1469 to 1823 1 to 348       348/361
(96 %)
16 diff
(95.6 %id)
AI278702 adenocarcinoma, colon .a 1481 to 1830 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AW170727 bowel (skin primary), metastatic melanoma to bowel .a 1481 to 1831 354 to 4       351/354
(99 %)
0 diff
(100 %id)
BE001658 breast_normal .a 1486 to 1750 1 to 265       265/273
(97 %)
9 diff
(96.8 %id)
BF886166 testis_normal .a 1488 to 1745 20 to 275       256/275
(93 %)
6 diff
(97.9 %id)
BQ375278 testis_normal .a 1490 to 1752 277 to 16       262/277
(94 %)
0 diff
(100 %id)
BM462327 leiomyosarcoma, uterus .a 1510 to 1827 96 to 413   AAA   318/413
(76 %)
6 diff
(98.6 %id)
BE937899 testis_normal .a 1515 to 1745 7 to 231       225/231
(97 %)
12 diff
(94.9 %id)
BE169278 head_neck .a 1516 to 1825 342 to 35     Submitted on the opposite strand 308/342
(90 %)
0 diff
(100 %id)
AA877072 Kidney .a 1516 to 1827 312 to 1       312/312
(100 %)
0 diff
(100 %id)
H40892 brain .a 1522 to 1820 307 to 9       299/307
(97 %)
0 diff
(100 %id)
AI890127 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1525 to 1827 304 to 1       304/304
(100 %)
7 diff
(97.7 %id)
AI689426 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1538 to 1827 289 to 1       289/289
(100 %)
2 diff
(99.4 %id)
AA578911   .a 1554 to 1828 8 to 282       275/282
(97 %)
6 diff
(97.9 %id)
AA983605 adenocarcinoma, colon .a 1561 to 1824 266 to 3       264/266
(99 %)
0 diff
(100 %id)
BE245696 leukopheresis .a 1585 to 1828 245 to 2       244/253
(96 %)
0 diff
(100 %id)
AI784380 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1615 to 1835 220 to 1   tiling clone,   220/220
(100 %)
1 diff
(99.6 %id)
AI280948 adenocarcinoma, colon .a 1625 to 1830 206 to 1       206/206
(100 %)
0 diff
(100 %id)
D20353   .a 1625 to 1823 1 to 199     Submitted on the opposite strand 199/199
(100 %)
0 diff
(100 %id)
FN173029 breast carcinoma .a 1626 to 1739 1 to 112       112/112
(100 %)
4 diff
(96.5 %id)
AI673715 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1641 to 1829 189 to 1       189/189
(100 %)
0 diff
(100 %id)
DA599154   .b 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
BP327265 prostata .b 36 to 616 1 to 581       581/581
(100 %)
0 diff
(100 %id)
NM_003336.2   .b 69 to 1867 1 to 1799 exact RefSeq,   1799/1799
(100 %)
1 diff
(100.0 %id)
DB187446 liver, tumor tissue .b 70 to 630 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB245379 uterus, tumor tissue .b 70 to 630 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA254121 caudate nucleus .b 72 to 634 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA838085 placenta .b 72 to 622 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BX420488 brain, fetal brain .b 81 to 1191 1 to 1111 exact     1111/1125
(98 %)
30 diff
(97.4 %id)
DA760633   .b 81 to 660 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA997256   .b 81 to 554 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
DA560401 heart .b 83 to 522 2 to 441   capped   440/440
(100 %)
0 diff
(100 %id)
DA673794   .b 83 to 657 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CD245975 White Matter .b 94 to 900 1 to 812 exact     812/886
(91 %)
9 diff
(99.0 %id)
AK313092 subthalamic nucleus .b 96 to 703 1 to 608 exact     608/608
(100 %)
1 diff
(99.9 %id)
BP222489   .b 96 to 676 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP271353 small intestine .b 96 to 677 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA051446   .b 97 to 645 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA066478 cerebellum .b 97 to 658 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA072757 cerebellum .b 97 to 671 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA565371 heart .b 97 to 663 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA597748   .b 97 to 656 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA667766 esophagus .b 97 to 660 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB268165 uterus .b 97 to 587 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
AK223045 thyroid .b 98 to 1865 1 to 1768 E62G     1768/1768
(100 %)
1 diff
(100.0 %id)
BP222903   .b 98 to 679 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP227272   .b 98 to 679 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP235217 coronary artery .b 98 to 680 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BU594647 mixed (pool of 40 RNAs) .b 98 to 905 1 to 816 E138X     816/816
(100 %)
18 diff
(97.8 %id)
BP279664   .b 98 to 684 1 to 587       587/587
(100 %)
0 diff
(100 %id)
BP314733 mammary gland .b 98 to 678 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA068016 cerebellum .b 99 to 675 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA352436 substantia nigra .b 99 to 675 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA614628   .b 99 to 685 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA690567   .b 99 to 646 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
AU128974   .b 99 to 879 2 to 792 E30X R71S K75X Q128X Y130X ... capped   791/827
(95 %)
24 diff
(97.1 %id)
DA848542 placenta .b 99 to 684 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA903365   .b 99 to 452 2 to 355   capped   354/354
(100 %)
0 diff
(100 %id)
DB254276 uterus .b 99 to 629 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
BP196223 adrenal gland .b 101 to 682 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AK223064   .b 101 to 1870 1 to 1770 V73A AAA   1770/1770
(100 %)
2 diff
(99.9 %id)
DA614135   .b 101 to 671 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BP312496 mammary gland .b 101 to 688 1 to 588       588/588
(100 %)
0 diff
(100 %id)
BP362012 thalamus .b 101 to 698 1 to 598       598/598
(100 %)
0 diff
(100 %id)
DA069909 cerebellum .b 102 to 671 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA361987 subthalamic nucleus .b 102 to 646 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA421539 cervix .b 102 to 692 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA531861 brain .b 102 to 719 2 to 619 exact capped   618/618
(100 %)
0 diff
(100 %id)
BP364673 lung .b 102 to 682 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM460782 leiomyosarcoma, uterus .b 103 to 903 136 to 949 exact     814/1086
(74 %)
25 diff
(97.7 %id)
BM547988 brain, hippocampus .b 105 to 1015 20 to 941 exact     922/1073
(85 %)
38 diff
(96.5 %id)
BQ938012 leiomyosarcoma, uterus .b 105 to 974 1 to 876 exact     876/876
(100 %)
6 diff
(99.4 %id)
AL527666 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 106 to 944 1 to 832 exact fully sequenced,   832/832
(100 %)
0 diff
(100 %id)
AL554264 placenta, Placenta Cot 25-normalized .b 106 to 1054 1 to 934 exact fully sequenced,   934/934
(100 %)
2 diff
(99.8 %id)
BC010175 Skin, melanotic melanoma. .b 107 to 813 1 to 707 exact available from MGC, AAA   707/707
(100 %)
0 diff
(100 %id)
CX871448 embryonic stem .b 107 to 952 1 to 846 exact     846/846
(100 %)
1 diff
(99.9 %id)
CF242862 Brain glioblastoma .b 107 to 953 1 to 852 exact     852/874
(97 %)
9 diff
(99.0 %id)
CT004850 T-Lymphocytes .b 107 to 893 1 to 787 R7X R8X A22X V24X S29X ...     787/787
(100 %)
6 diff
(99.3 %id)
CN275731 embryonic stem cells, cell lines H1, H7, andH9 .b 108 to 880 1 to 773 exact     773/773
(100 %)
3 diff
(99.7 %id)
DA430986 colon .b 109 to 668 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA512770 brain .b 109 to 860 2 to 756 N117S capped   755/758
(99 %)
8 diff
(99.0 %id)
DA512777 brain .b 109 to 885 2 to 778 N117S capped   777/778
(99 %)
9 diff
(98.9 %id)
CD673205 eye, Iris .b 109 to 614 1 to 506       506/506
(100 %)
0 diff
(100 %id)
BG771586 testis .b 109 to 980 1 to 865 K139Q     865/927
(93 %)
33 diff
(96.5 %id)
DB025856 testis .b 109 to 711 2 to 604 exact capped   603/603
(100 %)
0 diff
(100 %id)
BP202396 amygdala .b 111 to 692 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CN275730 embryonic stem cells, DMSO-treated H9 cellline .b 111 to 518 1 to 408       408/408
(100 %)
0 diff
(100 %id)
AL547443 placenta, Placenta Cot 25-normalized .b 112 to 979 1 to 860 S97M P98S T99N Y100L D101* fully sequenced,   860/860
(100 %)
1 diff
(99.9 %id)
AL545489 placenta, Placenta Cot 25-normalized .b 112 to 1074 1 to 954 exact fully sequenced,   954/954
(100 %)
0 diff
(100 %id)
AL556664 placenta .b 112 to 969 1 to 855 exact fully sequenced,   855/855
(100 %)
2 diff
(99.8 %id)
BY799784 eye .b 113 to 667 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DR760357 embryonic stem .b 113 to 954 1 to 842 exact     842/842
(100 %)
0 diff
(100 %id)
DB444334 testis .b 114 to 566 1 to 455       455/458
(99 %)
24 diff
(94.8 %id)
CX753489 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 114 to 668 1 to 555       555/555
(100 %)
0 diff
(100 %id)
BY997400   .b 114 to 793 22 to 701 exact     680/701
(97 %)
6 diff
(99.2 %id)
BM904536 leiomyosarcoma, uterus .b 116 to 1076 1 to 965 exact     965/1047
(92 %)
31 diff
(97.1 %id)
AL547028 placenta, Placenta Cot 25-normalized .b 119 to 1052 1 to 925 P43L E44* fully sequenced,   925/925
(100 %)
3 diff
(99.7 %id)
AL601372   .b 119 to 860 1 to 742 exact     742/742
(100 %)
3 diff
(99.6 %id)
BU158774 embryonal carcinoma, cell line, testis .b 121 to 1011 1 to 890 exact     890/890
(100 %)
4 diff
(99.6 %id)
CR978624 T-Lymphocytes .b 121 to 960 1 to 844 exact     844/844
(100 %)
11 diff
(98.7 %id)
H02951 placenta .b 124 to 485 1 to 362   fully sequenced,   362/362
(100 %)
3 diff
(99.2 %id)
BF308088 muscle, rhabdomyosarcoma .b 124 to 935 1 to 824 R7G R8A L9S M10C R11G ...     824/826
(99 %)
39 diff
(95.3 %id)
AU135850 placenta .b 124 to 843 2 to 736 N133E K134Q R135T E136G Y137I ... capped   735/741
(99 %)
23 diff
(96.9 %id)
BM128046 Islets of Langerhans, Pancreas .b 125 to 426 1 to 302   fully sequenced,   302/302
(100 %)
0 diff
(100 %id)
BM128123 Islets of Langerhans, Pancreas .b 125 to 426 1 to 302   fully sequenced,   302/302
(100 %)
0 diff
(100 %id)
BU176550 eye, retinoblastoma .b 125 to 813 1 to 689 exact     689/694
(99 %)
1 diff
(99.9 %id)
M74524   .b 125 to 1866 1 to 1742 E49G tiling clone,   1742/1743
(99 %)
2 diff
(99.9 %id)
BE276997 melanotic melanoma, skin .b 126 to 644 1 to 519       519/519
(100 %)
0 diff
(100 %id)
BU177002 melanotic melanoma, skin .b 126 to 813 1 to 688 exact AAA   688/688
(100 %)
0 diff
(100 %id)
AA314005 colon .b 132 to 595 1 to 464       464/464
(100 %)
0 diff
(100 %id)
R92832 liver and spleen .b 135 to 516 1 to 386   fully sequenced,   386/386
(100 %)
2 diff
(99.5 %id)
BU155911 melanotic melanoma, skin .b 135 to 939 1 to 813 exact     813/813
(100 %)
10 diff
(98.8 %id)
BP224712   .b 138 to 718 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
DA081919 cerebellum .b 139 to 701 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA429019 colon .b 139 to 696 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA969374 stomach .b 162 to 707 2 to 547 exact capped   546/546
(100 %)
0 diff
(100 %id)
BQ773667 Chondrosarcoma Grade II, Left Pelvis .b 174 to 813 658 to 19 exact AAA   640/640
(100 %)
0 diff
(100 %id)
BM671147 eye, optic nerve .b 179 to 813 653 to 19 exact AAA   635/635
(100 %)
0 diff
(100 %id)
AL552044 placenta, Placenta Cot 25-normalized .b 191 to 1049 1 to 854 Q17X fully sequenced,   854/854
(100 %)
0 diff
(100 %id)
AA917931 Kidney .b 269 to 813 545 to 1       545/545
(100 %)
0 diff
(100 %id)
CA398015 eye, RPE/choroid .b 316 to 936 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
CD299140 Blood vessels - aorta, basilar and artery .b 367 to 1098 1 to 739       739/740
(99 %)
15 diff
(98.0 %id)
BM127780 Islets of Langerhans, Pancreas .b 371 to 813 459 to 17   fully sequenced, AAA   443/443
(100 %)
0 diff
(100 %id)
BM127839 Islets of Langerhans, Pancreas .b 371 to 813 459 to 17   fully sequenced, AAA   443/443
(100 %)
0 diff
(100 %id)
AW205767   .b 373 to 813 458 to 18   AAA   441/441
(100 %)
0 diff
(100 %id)
AI087376 senescent fibroblast .b 374 to 813 450 to 11   AAA   440/440
(100 %)
0 diff
(100 %id)
AI371888 brain, glioblastoma (pooled) .b 374 to 812 439 to 1       439/439
(100 %)
0 diff
(100 %id)
BG680605 skin, squamous cell carcinoma .b 377 to 813 1 to 437   AAA   437/437
(100 %)
0 diff
(100 %id)
AA442497   .b 404 to 773 1 to 370       370/370
(100 %)
1 diff
(99.8 %id)
CB127128 Liver .b 409 to 1120 1 to 712       712/712
(100 %)
0 diff
(100 %id)
AA373126 lung .b 422 to 620 1 to 199       199/199
(100 %)
0 diff
(100 %id)
H04249 placenta .b 455 to 813 366 to 1   fully sequenced,   366/366
(100 %)
6 diff
(98.4 %id)
R93050 liver and spleen .b 455 to 786 332 to 1   fully sequenced,   332/332
(100 %)
1 diff
(99.7 %id)
CN275735 embryonic stem cells, DMSO-treated H9 cellline .b 469 to 1007 1 to 539       539/539
(100 %)
0 diff
(100 %id)
BG676599 skin, squamous cell carcinoma .b 472 to 1382 1 to 927       927/931
(99 %)
34 diff
(96.4 %id)
BX111620 placenta .b 672 to 1482 1 to 812       812/819
(99 %)
4 diff
(99.6 %id)
BG168769 hypernephroma, cell line, Kidney .b 779 to 1505 1 to 722       722/723
(99 %)
11 diff
(98.5 %id)
BX452703 adult brain, brain .b 786 to 1703 1 to 915       915/918
(99 %)
18 diff
(98.1 %id)
BX452704 adult brain, brain .b 786 to 1703 1 to 913       913/915
(99 %)
26 diff
(97.2 %id)
AA044203 uterus .b 820 to 1155 1 to 338       338/338
(100 %)
3 diff
(99.2 %id)
AL527665 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 914 to 1861 939 to 1   fully sequenced,   939/939
(100 %)
9 diff
(99.1 %id)
AL578874 placenta .b 939 to 1856 906 to 1   fully sequenced,   906/906
(100 %)
13 diff
(98.6 %id)
AL572372 placenta, Placenta Cot 25-normalized .b 949 to 1831 871 to 1   fully sequenced,   871/871
(100 %)
4 diff
(99.6 %id)
TI_149295355   .b 962 to 1870 982 to 86   AAA   897/990
(90 %)
25 diff
(97.5 %id)
AU135650 placenta .b 966 to 1451 10 to 498   fully sequenced, capped   489/497
(98 %)
2 diff
(99.6 %id)
BE784588 large cell carcinoma, lung .b 976 to 1724 1 to 735       735/842
(87 %)
20 diff
(97.7 %id)
BM785195 myeloma .b 981 to 1693 1 to 713       713/713
(100 %)
0 diff
(100 %id)
BU162742 large cell carcinoma, lung .b 996 to 1870 1 to 875   AAA   875/875
(100 %)
14 diff
(98.4 %id)
AI300485 carcinoid, lung .b 998 to 1627 1 to 630     Submitted on the opposite strand 630/630
(100 %)
0 diff
(100 %id)
AL575567 placenta, Placenta Cot 25-normalized .b 1019 to 1857 835 to 1   fully sequenced,   835/835
(100 %)
11 diff
(98.7 %id)
AL572142 placenta, Placenta Cot 25-normalized .b 1022 to 1853 824 to 1   fully sequenced,   824/824
(100 %)
4 diff
(99.6 %id)
AL577020 placenta, Placenta Cot 25-normalized .b 1024 to 1842 812 to 1   fully sequenced,   812/812
(100 %)
11 diff
(98.7 %id)
AL571271 placenta, Placenta Cot 25-normalized .b 1044 to 1840 786 to 1   fully sequenced,   786/786
(100 %)
4 diff
(99.5 %id)
TI_149290310   .b 1062 to 1869 882 to 83   AAA   800/808
(99 %)
14 diff
(98.3 %id)
AA134026 uterus .b 1066 to 1374 1 to 310   fully sequenced,   310/310
(100 %)
0 diff
(100 %id)
TI_149291375   .b 1067 to 1869 869 to 74   AAA   796/912
(87 %)
13 diff
(98.6 %id)
TI_154039909   .b 1070 to 1870 888 to 88   tiling clone, AAA   801/985
(81 %)
2 diff
(99.8 %id)
TI_154050092   .b 1089 to 1862 863 to 95   AAA   769/950
(80 %)
6 diff
(99.4 %id)
BU176782 eye, retinoblastoma .b 1101 to 1864 12 to 781   AAA   770/781
(98 %)
6 diff
(99.3 %id)
BQ009191 Chondrosarcoma, Left Pubic Bone .b 1105 to 1869 782 to 19   AAA   764/764
(100 %)
3 diff
(99.7 %id)
BU927848 mixed (pool of 40 RNAs) .b 1110 to 1865 1 to 756       756/760
(99 %)
8 diff
(99.0 %id)
TI_149289108   .b 1115 to 1869 875 to 122   AAA   754/943
(79 %)
6 diff
(99.4 %id)
AW976144   .b 1132 to 1868 738 to 1     Submitted on the opposite strand 738/738
(100 %)
4 diff
(99.5 %id)
AA151567 uterus .b 1150 to 1747 1 to 593   fully sequenced,   593/593
(100 %)
3 diff
(99.5 %id)
TI_149280682   .b 1150 to 1862 792 to 80   AAA   713/713
(100 %)
14 diff
(98.1 %id)
TI_149280683   .b 1150 to 1862 797 to 85   AAA   713/713
(100 %)
6 diff
(99.2 %id)
BM973998 lung .b 1153 to 1869 735 to 19   AAA   717/717
(100 %)
0 diff
(100 %id)
BU624495 cell lines, Enchondroma .b 1158 to 1870 732 to 19   AAA   714/714
(100 %)
1 diff
(99.9 %id)
CA424516 cell lines, Chondrosarcoma .b 1170 to 1870 719 to 19   AAA   701/701
(100 %)
0 diff
(100 %id)
TI_149277835   .b 1188 to 1869 775 to 94   AAA   682/683
(99 %)
1 diff
(99.9 %id)
BQ020189 Chondrosarcoma, Left Pubic Bone .b 1198 to 1870 691 to 19   AAA   673/673
(100 %)
0 diff
(100 %id)
BQ020369 Fibrosarcoma .b 1198 to 1862 682 to 19   AAA   664/664
(100 %)
1 diff
(99.9 %id)
BM985448 lung .b 1202 to 1870 687 to 19   AAA   669/669
(100 %)
0 diff
(100 %id)
CA943036 Pancreas, Purified pancreatic islet .b 1204 to 1652 1 to 449       449/449
(100 %)
0 diff
(100 %id)
CA398014 eye, RPE/choroid .b 1206 to 1870 681 to 17   AAA   665/665
(100 %)
0 diff
(100 %id)
BU677995 lung .b 1208 to 1869 680 to 19   AAA   662/662
(100 %)
1 diff
(99.9 %id)
AA663998 lung .b 1209 to 1668 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
BM991724 Bone, Subchondral Bone .b 1224 to 1862 657 to 19   AAA   639/639
(100 %)
0 diff
(100 %id)
BU681770 lung .b 1279 to 1869 609 to 19   AAA   591/591
(100 %)
0 diff
(100 %id)
AA133960 uterus .b 1344 to 1870 514 to 1   fully sequenced,   514/514
(100 %)
4 diff
(99.3 %id)
AA043941 uterus .b 1388 to 1869 484 to 1       484/484
(100 %)
3 diff
(99.4 %id)
AU156201 placenta .b 1421 to 1870 446 to 1   fully sequenced,   446/446
(100 %)
4 diff
(99.2 %id)
AA436694   .b 1463 to 1866 409 to 6       404/409
(98 %)
0 diff
(100 %id)
AA149657 uterus .b 1717 to 1873 149 to 1   fully sequenced,   149/149
(100 %)
2 diff
(98.7 %id)
BX491504   .c 1 to 507 9 to 516 D33E tiling clone,   516/516
(100 %)
4 diff
(99.3 %id)
DW444003 Liver .c 325 to 489 14 to 178   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 165/180
(91 %)
2 diff
(98.9 %id)
CV379863 marrow .c 479 to 805 1 to 332   tiling clone,   332/332
(100 %)
26 diff
(92.2 %id)
CU446435 epidermis .c 638 to 913 278 to 4   tiling clone, Submitted on the opposite strand 275/280
(98 %)
8 diff
(97.2 %id)
BX097097 liver and spleen .c 666 to 1322 1 to 656   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 656/656
(100 %)
2 diff
(99.7 %id)
R08660 liver and spleen .c 667 to 1054 1 to 390   fully sequenced,   390/390
(100 %)
1 diff
(99.8 %id)
AI076198 liver and spleen .c 802 to 1327 525 to 1       525/525
(100 %)
2 diff
(99.7 %id)
AI248210 liver and spleen .c 871 to 1323 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
BX642682   .c 977 to 1428 1 to 451   tiling clone,   451/451
(100 %)
2 diff
(99.6 %id)
R08563 liver and spleen .c 1024 to 1313 303 to 8   fully sequenced,   296/303
(97 %)
10 diff
(96.7 %id)
AA386290 brain .c 1113 to 1312 1 to 200       200/204
(98 %)
2 diff
(99.1 %id)
AA386292 brain .c 1113 to 1322 1 to 210       210/210
(100 %)
6 diff
(97.2 %id)
AA386291 brain .c 1116 to 1322 207 to 1       207/260
(79 %)
0 diff
(100 %id)
NM_181762.1   .d 1 to 1708 2 to 1709 exact RefSeq,   1709/1709
(100 %)
1 diff
(100.0 %id)
DA132107 alzheimer cortex .d 11 to 567 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BX457992 neuroblastoma .d 14 to 383 1 to 370       370/370
(100 %)
0 diff
(100 %id)
DB119977 thymus .d 14 to 618 2 to 607 exact capped   606/606
(100 %)
2 diff
(99.7 %id)
BP315602 mammary gland .d 15 to 594 1 to 581 R110A V111C S112F A113C I114N ...     581/582
(99 %)
3 diff
(99.5 %id)
CB988970 Human Placenta, placenta .d 25 to 769 24 to 772 exact     749/772
(97 %)
12 diff
(98.5 %id)
BP280309   .d 27 to 609 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
BG546123 lung .d 28 to 753 1 to 723 L83W     723/723
(100 %)
13 diff
(98.3 %id)
AK297696 lung .d 29 to 1390 1 to 1362 exact     1362/1362
(100 %)
2 diff
(99.9 %id)
DC354652 lung .d 29 to 583 1 to 556 R11L D12G F13L K14Q R15E ...     556/556
(100 %)
2 diff
(99.7 %id)
BP352807   .d 29 to 612 1 to 586 S29X E30R N31E N32Q I33H ...     586/592
(98 %)
4 diff
(99.4 %id)
TI_45236594   .d 30 to 830 55 to 870 A5G R6S R7C R8V L9R ...     816/1073
(76 %)
27 diff
(97.5 %id)
CR595604 placenta .d 34 to 1697 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
AL541614 placenta .d 34 to 907 2 to 875 exact fully sequenced,   874/875
(99 %)
5 diff
(99.5 %id)
CR618296 adult brain .d 37 to 1704 1 to 1668 exact tiling clone,   1668/1668
(100 %)
0 diff
(100 %id)
AL533155 adult brain, brain .d 37 to 780 1 to 744 exact     744/744
(100 %)
1 diff
(99.9 %id)
BI517680 pooled colon, kidney, stomach .d 38 to 734 1 to 703 A5G R6S R7C R8V L9R ...     703/1011
(69 %)
18 diff
(98.3 %id)
BP360935 thalamus .d 40 to 622 1 to 581 exact     581/581
(100 %)
2 diff
(99.7 %id)
CV811460 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 45 to 847 1 to 810 exact     810/822
(98 %)
28 diff
(96.6 %id)
TI_57147897   .d 50 to 727 30 to 703 exact     674/703
(95 %)
8 diff
(98.9 %id)
BF132095 hypernephroma, Kidney .d 51 to 721 1 to 660 I79S Q80T S81V L82S L83V     660/779
(84 %)
9 diff
(98.9 %id)
BI760588 pooled colon, kidney, stomach .d 55 to 727 1 to 669 exact     669/669
(100 %)
5 diff
(99.3 %id)
AA352792   .d 58 to 169 1 to 112       112/112
(100 %)
0 diff
(100 %id)
AA305395 colon .d 64 to 331 1 to 268       268/268
(100 %)
0 diff
(100 %id)
ES315116 occipital scalp hair, skin .d 72 to 236 1 to 165       165/165
(100 %)
0 diff
(100 %id)
BQ576081 Chondrosarcoma Grade II, Left Pelvis .d 98 to 654 575 to 19 A5X S73X AAA   557/557
(100 %)
0 diff
(100 %id)
CN275738 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 111 to 654 1 to 544 exact AAA   544/544
(100 %)
0 diff
(100 %id)
AA372435 colon .d 126 to 413 1 to 289       289/289
(100 %)
3 diff
(99.0 %id)
BI093289 cervix .d 141 to 754 1 to 614 exact     614/614
(100 %)
0 diff
(100 %id)
CF243172 Brain glioblastoma .d 224 to 1005 1 to 790       790/801
(98 %)
15 diff
(98.2 %id)
BI052534 placenta_normal .d 268 to 695 428 to 1       428/428
(100 %)
2 diff
(99.6 %id)
BE789910 large cell carcinoma, lung .d 272 to 1010 1 to 728       728/851
(85 %)
23 diff
(97.3 %id)
BG171834 hypernephroma, cell line, Kidney .d 338 to 1110 1 to 768       768/973
(78 %)
31 diff
(96.9 %id)
CB120614 Liver .d 367 to 713 347 to 1     Submitted on the opposite strand 347/347
(100 %)
2 diff
(99.5 %id)
AA332715 Embryo, 8 weeks .d 371 to 688 1 to 321       321/321
(100 %)
2 diff
(99.4 %id)
CD106403 brain, Pituitary .d 376 to 929 1 to 562       562/975
(57 %)
9 diff
(99.1 %id)
BP260401 small intestine .d 390 to 858 1 to 468       468/584
(80 %)
23 diff
(96.1 %id)
BM509788 Pancreas, Purified pancreatic islet .d 391 to 925 1 to 535       535/535
(100 %)
0 diff
(100 %id)
CK822627 Pancreas, Purified pancreatic islet .d 393 to 993 1 to 601     Submitted on the opposite strand 601/601
(100 %)
0 diff
(100 %id)
BQ363618 stomach .d 648 to 761 114 to 1       114/114
(100 %)
0 diff
(100 %id)
AA911148 carcinoid, lung .d 840 to 1027 1 to 188     Submitted on the opposite strand 188/188
(100 %)
0 diff
(100 %id)
AL541613 placenta .d 877 to 1661 820 to 36   fully sequenced,   785/806
(97 %)
17 diff
(97.9 %id)
FN161415 breast carcinoma .d 918 to 1021 104 to 1     Submitted on the opposite strand 104/104
(100 %)
0 diff
(100 %id)
DV460965 cochlea, ear .d 1021 to 1139 1 to 119       119/119
(100 %)
0 diff
(100 %id)
BI518387 pooled colon, kidney, stomach .d 1109 to 1668 566 to 2       565/566
(99 %)
0 diff
(100 %id)
TI_45236595   .d 1109 to 1668 566 to 2       565/566
(99 %)
0 diff
(100 %id)
DA068506 cerebellum .e 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
AL540766 placenta .e 191 to 975 1 to 776 exact fully sequenced,   776/776
(100 %)
0 diff
(100 %id)
BQ717080 sympathetic trunk .e 197 to 981 1 to 792 exact     792/874
(90 %)
15 diff
(98.3 %id)
BX377743 Placenta Cot 25-normalized .e 201 to 1176 1 to 964 exact tiling clone,   964/977
(98 %)
21 diff
(97.9 %id)
AL568584 placenta .e 945 to 1710 752 to 1   tiling clone, fully sequenced,   752/752
(100 %)
29 diff
(96.2 %id)
BG819705 anaplastic oligodendroglioma with 1p/19qloss, brain .f 193 to 630 204 to 653 P44L D45T A47L R48A D49N ... tiling clone,   653/845
(77 %)
34 diff
(96.0 %id)
DB062834 testis .g 1 to 496 2 to 504   tiling clone, to resequence, capped   503/503
(100 %)
9 diff
(98.3 %id)
BX480570   .g 355 to 932 1 to 579   tiling clone,   579/579
(100 %)
10 diff
(98.3 %id)
AL589251 human spinal cord .g 463 to 901 28 to 462   tiling clone,   435/462
(94 %)
6 diff
(98.8 %id)
CN287044 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 891 to 1445 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
BX644106   .g 1435 to 1622 1 to 188   tiling clone,   188/188
(100 %)
0 diff
(100 %id)
DB339425 testis .g 2261 to 2802 542 to 1 exact tiling clone, to resequence,   542/542
(100 %)
0 diff
(100 %id)
DA804185 brain .h 1 to 543 2 to 545   tiling clone, capped   544/544
(100 %)
1 diff
(99.9 %id)
DA114403 cerebellum .h 45 to 619 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA112637 cerebellum .h 118 to 701 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA376723 thalamus .h 118 to 675 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA733286   .h 360 to 1160 2 to 803   capped   802/802
(100 %)
21 diff
(97.4 %id)
BC042021 Brain, hypothalamus .h 602 to 3241 1 to 2640 I34V tiling clone, available from MGC, AAA   2640/2640
(100 %)
5 diff
(99.9 %id)
NM_181777.1   .h 603 to 3241 1 to 2639 exact RefSeq, AAA   2639/2639
(100 %)
0 diff
(100 %id)
AA394081   .h 1229 to 1887 1 to 659   tiling clone, fully sequenced,   659/659
(100 %)
0 diff
(100 %id)
BM741851 stomach .h 1625 to 2192 1 to 568 exact tiling clone, AAA   568/568
(100 %)
1 diff
(99.9 %id)
AA398114   .h 1834 to 2192 387 to 30 Q18H fully sequenced, AAA   358/358
(100 %)
1 diff
(99.8 %id)
DB365175   .h 2678 to 3251 574 to 1   tiling clone,   574/575
(99 %)
7 diff
(98.8 %id)
DB311193 thalamus .h 2721 to 3248 528 to 1       528/528
(100 %)
1 diff
(99.9 %id)
N87065   .i 1 to 209 1 to 210   tiling clone,   210/215
(97 %)
7 diff
(96.8 %id)
CR614387 Placenta Cot 25-normalized .i 5 to 1569 1 to 1565   tiling clone,   1565/1565
(100 %)
0 diff
(100 %id)
CR614696 placenta .j 1 to 1524 1 to 1524 exact tiling clone,   1524/1524
(100 %)
0 diff
(100 %id)
DA612420   .k 1 to 557 2 to 559 R11L D12G F13L K14Q R15E ... tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
DW455023 Liver .l 1 to 168 10 to 177 D2G P3A S19N V29A T40N ... tiling clone,   168/177
(94 %)
9 diff
(95.0 %id)
DB218916 trachea .m 1 to 450 2 to 451   tiling clone, to resequence, capped   450/450
(100 %)
0 diff
(100 %id)
DB290028 uterus .m 143 to 618 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
BQ825873 colon, colon adenoma .m 189 to 613 29 to 453       425/484
(87 %)
1 diff
(99.8 %id)
BQ825879 colon, colon adenoma .m 189 to 613 28 to 452       425/466
(91 %)
1 diff
(99.8 %id)
DB289507 uterus .m 291 to 858 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
AL589387 human spinal cord .m 295 to 838 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DA861081 placenta .m 307 to 891 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA241280 brain .m 499 to 1063 2 to 565 exact tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
DB215840 trachea .m 730 to 1289 2 to 561 exact capped   560/560
(100 %)
1 diff
(99.9 %id)
BX500890 Liver .m 825 to 1506 1 to 681 L10Y Q11K M12* tiling clone,   681/681
(100 %)
1 diff
(99.9 %id)
DB349289 trachea .m 2302 to 2849 548 to 1   tiling clone, to resequence,   548/548
(100 %)
0 diff
(100 %id)
DA546037   .n 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
BX505065   .n 31 to 721 1 to 691       691/691
(100 %)
1 diff
(99.9 %id)
BI667955 brain, hypothalamus .n 124 to 739 1 to 619   available from MGC,   619/619
(100 %)
8 diff
(98.8 %id)
DB491859 hypothalamus .n 129 to 543 1 to 416       416/416
(100 %)
2 diff
(99.6 %id)
TI_44343913   .n 130 to 739 92 to 704       613/704
(87 %)
6 diff
(99.2 %id)
T07802   .n 221 to 563 346 to 1       346/350
(98 %)
4 diff
(98.9 %id)
DR000854 fetal brain .n 319 to 1016 1 to 696   tiling clone,   696/696
(100 %)
4 diff
(99.5 %id)
DA114828 cerebellum .n 440 to 1016 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
BG547581 lung .n 567 to 1392 1 to 843 F3L W20L K21E N22K P23T ... tiling clone,   843/864
(97 %)
29 diff
(96.7 %id)
AW959519   .n 1015 to 1564 1 to 555 exact tiling clone,   555/557
(99 %)
27 diff
(95.2 %id)
AA363082 ovary .n 1016 to 1302 11 to 297 F3X S40X     287/297
(96 %)
6 diff
(98.0 %id)
H43221 breast .n 1342 to 1790 1 to 464   tiling clone,   464/464
(100 %)
22 diff
(95.3 %id)
AV696304 hepatocellular carcinoma .n 1500 to 2200 694 to 1   tiling clone, Submitted on the opposite strand 694/699
(99 %)
6 diff
(99.2 %id)
BG548082 lung .n 1711 to 2413 1 to 703       703/705
(99 %)
9 diff
(98.8 %id)
DT216226 brain .n 1769 to 2419 1 to 650   tiling clone,   650/650
(100 %)
1 diff
(99.9 %id)
BM993887 Bone, Subchondral Bone .n 1834 to 2266 216 to 648     Submitted on the opposite strand 433/652
(66 %)
2 diff
(99.7 %id)
CN479422 Bone, Subchondral Bone .n 1834 to 2266 216 to 648     Submitted on the opposite strand 433/652
(66 %)
2 diff
(99.7 %id)
BM717887 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .n 2303 to 2755 453 to 1     Submitted on the opposite strand 453/458
(98 %)
5 diff
(99.0 %id)
BU742104 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .n 2320 to 2756 17 to 453   tiling clone, Submitted on the opposite strand 437/445
(98 %)
1 diff
(99.8 %id)
AA830397 germinal center B cell .o-u 1 to 416 444 to 29 exact tiling clone, AAA   416/421
(98 %)
3 diff
(99.3 %id)
DB300763 cerebellum Gene UBE2A, variant not shown              
DA125070 cerebellum Gene UBE2A, variant not shown       capped      
AI342550 lung Gene UBE2A, variant not shown              
356 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI