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Gene UBOX5andFASTKD5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
459 supporting clones for gene UBOX5andFASTKD5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB058695 brain .a-u 1 to 5223 1 to 5223 exact tiling clone, available from KIAA,   5223/5223
(100 %)
12 diff
(99.8 %id)
AA878159 pharynx, squamous cell carcinoma .a-u 547 to 821 275 to 1   tiling clone,   275/275
(100 %)
0 diff
(100 %id)
BE145277 head_neck .a-u 593 to 1139 3 to 549       547/549
(99 %)
6 diff
(99.0 %id)
BE151202 head_neck .a-u 860 to 1459 17 to 615       599/615
(97 %)
6 diff
(99.1 %id)
BE151203 head_neck .a-u 866 to 1493 27 to 652       626/652
(96 %)
6 diff
(99.1 %id)
AW820211 stomach .a-u 1060 to 1621 1 to 578       578/581
(99 %)
27 diff
(95.4 %id)
TI_1948081757   .a-u 3998 to 4971 1070 to 121       950/1094
(86 %)
0 diff
(100 %id)
BE546958 cervical carcinoma cell line, cervix .a-u 4034 to 4754 1 to 709       709/714
(99 %)
17 diff
(97.7 %id)
DA893975 skeletal muscle .a-u 4035 to 4516 2 to 483   capped   482/482
(100 %)
2 diff
(99.6 %id)
AA099268 uterus .a-u 4053 to 4647 13 to 608       596/611
(97 %)
9 diff
(98.6 %id)
TI_1948081983   .a-u 4054 to 4971 1041 to 130       912/1113
(81 %)
0 diff
(100 %id)
BQ645782 hepatocellular carcinoma, cell line, Liver .a-u 4076 to 4821 11 to 758       748/904
(82 %)
6 diff
(99.4 %id)
BI252325 hepatocellular carcinoma, cell line, Liver .a-u 4082 to 4580 1 to 504   fully sequenced,   504/504
(100 %)
8 diff
(98.5 %id)
BQ646751 hepatocellular carcinoma, cell line, Liver .a-u 4085 to 4874 1 to 807       807/845
(95 %)
22 diff
(97.4 %id)
BE869572 adenocarcinoma, colon .a-u 4102 to 4843 1 to 726       726/771
(94 %)
13 diff
(98.4 %id)
CN365707 embryonic stem cells, DMSO-treated H9 cellline .a-u 4108 to 4439 1 to 332       332/332
(100 %)
1 diff
(99.7 %id)
AA084251   .a-u 4125 to 4275 1 to 151     Submitted on the opposite strand 151/151
(100 %)
0 diff
(100 %id)
BM852813 Ascites, stomach .a-u 4130 to 4627 1 to 498       498/498
(100 %)
0 diff
(100 %id)
CB147572 Liver .a-u 4134 to 4651 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
AA084250   .a-u 4135 to 4294 164 to 1     Submitted on the opposite strand 164/164
(100 %)
4 diff
(97.6 %id)
BX362073   .a-u 4233 to 4754 975 to 444       532/538
(98 %)
0 diff
(100 %id)
BI004155 head_normal .a-u 4289 to 4832 541 to 1       541/541
(100 %)
12 diff
(97.8 %id)
T10397   .a-u 4301 to 4525 1 to 221       221/221
(100 %)
7 diff
(96.9 %id)
BU195883 melanotic melanoma, cell line, skin .a-u 4325 to 5133 1 to 810       810/835
(97 %)
4 diff
(99.6 %id)
BU185428 melanotic melanoma, cell line, skin .a-u 4325 to 5208 1 to 889       889/889
(100 %)
14 diff
(98.5 %id)
T62487 lung .a-u 4327 to 4685 1 to 365       365/468
(77 %)
10 diff
(97.9 %id)
TI_1948081974   .a-u 4431 to 4971 671 to 123       549/1139
(48 %)
0 diff
(100 %id)
BI252997 hepatocellular carcinoma, cell line, Liver .a-u 4550 to 5171 624 to 1   fully sequenced,   624/624
(100 %)
6 diff
(99.1 %id)
BQ019153 lung, Metastatic Chondrosarcoma .a-u 4567 to 5223 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
AA456537 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a-u 4569 to 5048 1 to 476       476/476
(100 %)
4 diff
(99.2 %id)
BU624202 cell lines, Enchondroma .a-u 4571 to 5217 665 to 19   AAA   647/647
(100 %)
2 diff
(99.7 %id)
BE392457 endometrium, adenocarcinoma cell line, uterus .a-u 4574 to 4971 1 to 396       396/396
(100 %)
4 diff
(99.0 %id)
BM712789.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 4583 to 5090 1 to 508     also hits gene PRPF4B 508/508
(100 %)
2 diff
(99.7 %id)
BQ001676 lung, Metastatic Chondrosarcoma .a-u 4657 to 5223 585 to 19   AAA   567/575
(98 %)
0 diff
(100 %id)
CK299085 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 4657 to 5223 585 to 19   AAA   567/575
(98 %)
0 diff
(100 %id)
TI_151809081   .a-u 4657 to 5223 77 to 644   fully sequenced, AAA   568/568
(100 %)
3 diff
(99.5 %id)
BF437441 Prostate .a-u 4691 to 5225 536 to 2       535/536
(99 %)
0 diff
(100 %id)
AI676066 Prostate .a-u 4710 to 5225 516 to 3       514/516
(99 %)
0 diff
(100 %id)
BF431326 Kidney .a-u 4717 to 5229 513 to 1   tiling clone,   513/513
(100 %)
1 diff
(99.9 %id)
AW516198 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a-u 4727 to 5224 498 to 1       498/498
(100 %)
0 diff
(100 %id)
AA872993 germinal center B cell .a-u 4730 to 5229 506 to 8       499/506
(98 %)
0 diff
(100 %id)
AI862396 colon, colon tumor, RER+ .a-u 4737 to 5223 487 to 1       487/487
(100 %)
0 diff
(100 %id)
AI686512 Prostate .a-u 4737 to 5225 491 to 3       489/491
(99 %)
0 diff
(100 %id)
AI916603 Kidney .a-u 4737 to 5228 492 to 1       492/492
(100 %)
1 diff
(99.8 %id)
BE044059 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a-u 4737 to 5227 491 to 1       491/491
(100 %)
0 diff
(100 %id)
BF435647 sciatic nerve .a-u 4741 to 5223 499 to 17   AAA   483/483
(100 %)
1 diff
(99.8 %id)
DB506975 testis .a-u 4746 to 5221 1 to 476     Submitted on the opposite strand 476/478
(99 %)
11 diff
(97.7 %id)
AI656235 pooled germ cell tumors .a-u 4756 to 5223 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AI760422 colon, colon tumor, RER+ .a-u 4756 to 5220 465 to 1       465/465
(100 %)
1 diff
(99.8 %id)
AI768494 Kidney .a-u 4757 to 5229 473 to 1       473/473
(100 %)
0 diff
(100 %id)
DB517848 testis .a-u 4761 to 5213 1 to 454     Submitted on the opposite strand 454/455
(99 %)
2 diff
(99.6 %id)
AW134699   .a-u 4763 to 5223 478 to 18   AAA   461/461
(100 %)
0 diff
(100 %id)
AW593863 pooled germ cell tumors .a-u 4768 to 5225 459 to 2       458/459
(99 %)
0 diff
(100 %id)
BF222547 Prostate .a-u 4768 to 5225 459 to 2       458/459
(99 %)
0 diff
(100 %id)
AW340874 2 pooled tumors (clear cell type), Kidney .a-u 4770 to 5229 463 to 4       460/463
(99 %)
0 diff
(100 %id)
BU589565 mixed (pool of 40 RNAs) .a-u 4786 to 5225 1 to 440       440/444
(99 %)
5 diff
(98.9 %id)
AI365227 Kidney .a-u 4790 to 5229 443 to 3       441/443
(99 %)
0 diff
(100 %id)
DB512219 testis .a-u 4793 to 5221 1 to 430     Submitted on the opposite strand 430/432
(99 %)
5 diff
(98.9 %id)
AI950211 pooled germ cell tumors .a-u 4793 to 5227 435 to 1       435/435
(100 %)
2 diff
(99.6 %id)
BX098993 ovary, tumor, 5 pooled (see description) .a-u 4802 to 5223 436 to 15   AAA   422/436
(96 %)
0 diff
(100 %id)
AI521183 Kidney .a-u 4830 to 5225 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AW269381 Kidney .a-u 4830 to 5218 396 to 8       389/396
(98 %)
0 diff
(100 %id)
AW019939 cochlea, ear .a-u 4831 to 5223 4 to 396   fully sequenced, AAA   393/396
(99 %)
6 diff
(98.5 %id)
AI343443 colon, colon tumor, RER+ .a-u 4841 to 5218 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AI862402 colon, colon tumor, RER+ .a-u 4844 to 5213 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AI560709 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a-u 4845 to 5223 401 to 23   AAA   379/379
(100 %)
1 diff
(99.8 %id)
BI913898 brain .a-u 4845 to 5223 1 to 379   AAA   379/379
(100 %)
2 diff
(99.5 %id)
TI_57243465   .a-u 4845 to 5223 35 to 413   AAA   379/413
(91 %)
10 diff
(97.6 %id)
AA906566 pooled .a-u 4846 to 5226 384 to 4       381/384
(99 %)
0 diff
(100 %id)
AW242591 Kidney .a-u 4846 to 5225 381 to 1       381/381
(100 %)
1 diff
(99.8 %id)
CD676820 eye, Trabecular meshwork .a-u 4863 to 5226 1 to 364   AAA   364/364
(100 %)
0 diff
(100 %id)
T62632 lung .a-u 4866 to 5212 350 to 1       350/352
(99 %)
7 diff
(98.1 %id)
AI825167 pooled germ cell tumors .a-u 4873 to 5227 353 to 1       353/353
(100 %)
2 diff
(99.5 %id)
BI490972 cochlea, ear .a-u 4875 to 5223 371 to 23   fully sequenced, AAA   349/349
(100 %)
0 diff
(100 %id)
AW182833 pooled .a-u 4884 to 5227 363 to 20   AAA   344/344
(100 %)
0 diff
(100 %id)
AA910881 Kidney .a-u 4892 to 5224 332 to 1       332/332
(100 %)
1 diff
(99.7 %id)
AI355516 colon, moderately-differentiated adenocarcinoma .a-u 4915 to 5229 317 to 3       315/317
(99 %)
0 diff
(100 %id)
TI_151729696   .a-u 4921 to 5223 381 to 79   fully sequenced, AAA   303/303
(100 %)
0 diff
(100 %id)
AI470602 Kidney .a-u 4973 to 5223 268 to 18   AAA   251/251
(100 %)
0 diff
(100 %id)
AI910667 ovary, tumor, 5 pooled (see description) .a-u 5031 to 5229 201 to 3       199/202
(98 %)
0 diff
(100 %id)
EC575120 Prostate .a-u 5121 to 5222 108 to 8       101/108
(93 %)
0 diff
(100 %id)
BI562263 testis .b 1 to 840 1 to 840       840/862
(97 %)
38 diff
(95.6 %id)
TI_44349865   .b 2 to 840 132 to 970       839/992
(84 %)
42 diff
(95.8 %id)
DC331478 hippocampus .b 5 to 563 1 to 559   tiling clone,   559/559
(100 %)
0 diff
(100 %id)
DC313355 amygdala .b 7 to 567 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DA766510 tongue .b 7 to 579 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA394061 thalamus .b 8 to 575 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DC346251 tongue, tumor tissue .b 8 to 564 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DB038408 testis .b 8 to 576 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BF203365 muscle, rhabdomyosarcoma .b 12 to 651 1 to 639       639/946
(67 %)
20 diff
(97.9 %id)
BC007413 Muscle, rhabdomyosarcoma .b 13 to 2869 1 to 2857 exact tiling clone, available from MGC, AAA   2857/2857
(100 %)
1 diff
(100.0 %id)
NM_021826.4   .b 13 to 2873 1 to 2861 exact RefSeq, AAA   2861/2861
(100 %)
0 diff
(100 %id)
DA769660 brain .b 15 to 576 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB008973 cervix, tumor tissue .b 16 to 402 2 to 390   capped   389/391
(99 %)
4 diff
(99.0 %id)
DB452288 testis .b 17 to 522 1 to 506       506/508
(99 %)
2 diff
(99.7 %id)
DB461393 testis .b 17 to 505 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
DA089941 cerebellum .b 18 to 564 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA280549 corpus callosum .b 18 to 598 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA439400 tongue, tumor tissue .b 18 to 407 2 to 391   capped   390/390
(100 %)
0 diff
(100 %id)
DA471592   .b 18 to 591 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA815373   .b 18 to 580 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA866712 Prostate .b 18 to 354 2 to 336   capped   335/335
(100 %)
3 diff
(99.2 %id)
DB078864 testis .b 18 to 582 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB160207 thymus .b 18 to 617 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
TI_44350654   .b 19 to 723 74 to 778       705/778
(90 %)
6 diff
(99.3 %id)
DA731671   .b 19 to 901 2 to 887   capped   886/892
(99 %)
24 diff
(97.4 %id)
BI562117 testis .b 20 to 798 1 to 789       789/790
(99 %)
23 diff
(97.1 %id)
BE019262 muscle, rhabdomyosarcoma .b 23 to 514 1 to 492       492/492
(100 %)
5 diff
(99.0 %id)
BG721998 testis .b 23 to 761 1 to 736       736/737
(99 %)
7 diff
(99.1 %id)
BI458689 testis .b 23 to 694 1 to 681       681/684
(99 %)
32 diff
(95.4 %id)
BX951474   .b 24 to 676 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
BQ423809 leiomyosarcoma, uterus .b 24 to 895 1 to 886       886/891
(99 %)
39 diff
(95.7 %id)
TI_44351156   .b 25 to 798 132 to 915       784/916
(85 %)
24 diff
(97.4 %id)
DA777392 brain .b 26 to 594 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA654283   .b 27 to 516 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
BP326181 prostata .b 27 to 608 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA182007 amygdala .b 28 to 583 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BX487209   .b 28 to 638 1 to 612       612/612
(100 %)
2 diff
(99.7 %id)
DA489086 brain .b 28 to 600 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA491106 brain .b 28 to 585 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA514000 brain .b 28 to 594 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BI561436 testis .b 28 to 723 1 to 696       696/696
(100 %)
2 diff
(99.8 %id)
DA770236 brain .b 28 to 599 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB266113 uterus .b 28 to 604 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA567297 heart .b 29 to 596 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA697106   .b 29 to 602 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA793530 brain .b 29 to 572 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA804834 brain .b 29 to 576 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB080554 testis .b 29 to 600 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB166012 thyroid gland .b 29 to 776 2 to 748   capped   747/747
(100 %)
6 diff
(99.2 %id)
BI463639 testis .b 32 to 771 1 to 738       738/738
(100 %)
11 diff
(98.6 %id)
BQ431148 melanotic melanoma, skin .b 33 to 891 1 to 859       859/860
(99 %)
7 diff
(99.2 %id)
AK023211   .b 34 to 2869 1 to 2836 exact available from FLJ,   2836/2836
(100 %)
2 diff
(100.0 %id)
BM544136 ovary (pool of 3) .b 35 to 994 18 to 982       965/1053
(91 %)
16 diff
(98.5 %id)
DA736111   .b 35 to 927 2 to 904   capped   903/903
(100 %)
25 diff
(97.3 %id)
AU131846   .b 35 to 894 2 to 866   capped   865/872
(99 %)
16 diff
(98.2 %id)
BP197359 adrenal gland .b 37 to 621 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BP365593 lung .b 37 to 620 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA053684   .b 38 to 603 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA141866 alzheimer cortex .b 38 to 587 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BX955277   .b 38 to 724 1 to 687       687/687
(100 %)
4 diff
(99.5 %id)
DA499665 brain .b 38 to 577 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA508048 brain .b 38 to 617 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA524155 brain .b 38 to 583 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA704147   .b 38 to 564 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA712144   .b 38 to 582 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA765815 tongue .b 38 to 608 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA794654 brain .b 38 to 562 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA953669 Spleen .b 38 to 610 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB077120 testis .b 38 to 611 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB085859 testis .b 38 to 606 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA364741 subthalamic nucleus .b 40 to 318 2 to 280   capped   279/279
(100 %)
0 diff
(100 %id)
BM909470 lymph, lymphoma, cell line .b 40 to 1035 1 to 998       998/1052
(94 %)
12 diff
(98.9 %id)
BM927457 lymph, lymphoma, cell line .b 40 to 1025 1 to 994       994/1076
(92 %)
16 diff
(98.6 %id)
BQ642543 lymph, lymphoma, cell line .b 40 to 829 1 to 792       792/916
(86 %)
9 diff
(99.1 %id)
DA774410 brain .b 40 to 615 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
CR593540 T cells (Jurkat cell line) Cot10-normalized .b 41 to 2828 1 to 2788 exact     2788/2788
(100 %)
0 diff
(100 %id)
BX362074   .b 41 to 996 1 to 959       959/959
(100 %)
9 diff
(99.1 %id)
BI194644 epithelioid carcinoma cell line, Pancreas .b 41 to 666 1 to 630       630/926
(68 %)
18 diff
(98.1 %id)
BI194381 epithelioid carcinoma cell line, Pancreas .b 41 to 757 1 to 720       720/722
(99 %)
6 diff
(99.2 %id)
BI457140 epithelioid carcinoma cell line, Pancreas .b 41 to 692 1 to 644       644/644
(100 %)
8 diff
(98.8 %id)
TI_45133380   .b 41 to 692 60 to 703       644/644
(100 %)
8 diff
(98.8 %id)
AL702085 human skeletal muscle .b 43 to 639 1 to 595       595/595
(100 %)
6 diff
(99.0 %id)
BE888779 leiomyosarcoma, uterus .b 43 to 714 1 to 670       670/910
(73 %)
11 diff
(98.8 %id)
BU507619 leiomyosarcoma, uterus .b 43 to 841 1 to 803       803/867
(92 %)
6 diff
(99.4 %id)
BX494590 Liver .b 45 to 553 1 to 509       509/509
(100 %)
2 diff
(99.7 %id)
BM462925 melanotic melanoma, skin .b 45 to 699 1 to 664       664/1024
(64 %)
13 diff
(98.8 %id)
CX871533 embryonic stem .b 45 to 897 1 to 853       853/853
(100 %)
0 diff
(100 %id)
DB442080 testis .b 46 to 483 1 to 438       438/439
(99 %)
5 diff
(98.9 %id)
DB169847 kidney, tumor tissue .b 47 to 612 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA149330 amygdala .b 48 to 624 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BC011856 Skin, melanotic melanoma, high MDR. .b 49 to 2869 1 to 2821 exact tiling clone, available from MGC, AAA   2821/2821
(100 %)
0 diff
(100 %id)
DA574575   .b 50 to 610 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB015414 esophageal, tumor tissue .b 50 to 624 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB274874 uterus .b 50 to 603 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BE902983 choriocarcinoma, placenta .b 56 to 690 1 to 632       632/633
(99 %)
21 diff
(96.7 %id)
BQ055117 lymph, lymphoma, cell line .b 56 to 1009 1 to 968       968/1038
(93 %)
19 diff
(98.2 %id)
BQ059039 lymph, lymphoma, cell line .b 56 to 1062 1 to 1014       1014/1019
(99 %)
23 diff
(97.8 %id)
BQ059355 lymph, lymphoma, cell line .b 56 to 823 1 to 778       778/917
(84 %)
14 diff
(98.5 %id)
BQ059605 lymph, lymphoma, cell line .b 56 to 987 1 to 945       945/947
(99 %)
15 diff
(98.5 %id)
BQ062115 lymph, lymphoma, cell line .b 56 to 1074 1 to 1024       1024/1029
(99 %)
21 diff
(98.0 %id)
BQ062883 lymph, lymphoma, cell line .b 56 to 939 1 to 898       898/956
(93 %)
19 diff
(98.1 %id)
BQ063210 lymph, lymphoma, cell line .b 56 to 824 1 to 775       775/891
(86 %)
9 diff
(99.0 %id)
BQ065072 lymph, lymphoma, cell line .b 56 to 1060 1 to 1019       1019/1020
(99 %)
31 diff
(97.0 %id)
BQ642172 lymph, lymphoma, cell line .b 56 to 970 1 to 925       925/928
(99 %)
16 diff
(98.3 %id)
BQ643186 lymph, lymphoma, cell line .b 56 to 983 1 to 937       937/937
(100 %)
8 diff
(99.2 %id)
BG248689 adenocarcinoma cell line, colon .b 61 to 851 1 to 785       785/911
(86 %)
30 diff
(96.8 %id)
DR157491 human embryonic stem cells differentiated toan early endodermal cell type .b 61 to 863 1 to 803       803/803
(100 %)
0 diff
(100 %id)
BF689685 melanotic melanoma, high MDR (cell line), skin .b 62 to 457 1 to 448       330/449
(73 %)
11 diff
(97.6 %id)
BE903549 choriocarcinoma, placenta .b 64 to 836 49 to 807       759/953
(79 %)
38 diff
(96.1 %id)
DA790354 brain .b 65 to 611 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB157700 thymus .b 65 to 655 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA377682 thalamus .b 68 to 640 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA653081   .b 68 to 637 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA658729   .b 68 to 645 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA770510 brain .b 68 to 632 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA791998 brain .b 68 to 576 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA794953 brain .b 68 to 576 2 to 510   capped   509/509
(100 %)
1 diff
(99.9 %id)
DB154237 thymus .b 68 to 662 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
BP279440   .b 69 to 650 1 to 576       576/581
(99 %)
9 diff
(98.5 %id)
CN365706 embryonic stem cells, cell lines H1, H7, andH9 .b 71 to 429 1 to 359       359/359
(100 %)
0 diff
(100 %id)
DA440797 tongue, tumor tissue .b 72 to 639 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA770634 brain .b 72 to 645 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BG767108 melanotic melanoma, high MDR (cell line), skin .b 75 to 1013 1 to 942       942/943
(99 %)
45 diff
(95.3 %id)
BM551904 astrocytoma grade IV, cell line, brain .b 79 to 1131 1 to 1065       1065/1065
(100 %)
33 diff
(97.0 %id)
BG394099 eye, retinoblastoma .b 97 to 737 20 to 678       668/1170
(57 %)
73 diff
(93.8 %id)
BQ055034 lymph, lymphoma, cell line .b 183 to 861 151 to 836       686/1103
(62 %)
48 diff
(95.7 %id)
DN990495 brain, whole brain .b 213 to 688 8 to 483       476/483
(98 %)
6 diff
(98.8 %id)
BU166066 melanotic melanoma, skin .b 229 to 1065 1 to 840       840/843
(99 %)
6 diff
(99.3 %id)
BU183839 melanotic melanoma, skin .b 255 to 1119 1 to 866       866/869
(99 %)
11 diff
(98.8 %id)
AI903073 breast .b 283 to 705 1 to 423       423/423
(100 %)
11 diff
(97.4 %id)
CV026538 mixed .b 324 to 826 1 to 503       503/503
(100 %)
2 diff
(99.7 %id)
CV028529 mixed .b 324 to 891 1 to 568       568/568
(100 %)
0 diff
(100 %id)
TI_1948081747   .b 324 to 1105 125 to 910       786/1139
(69 %)
30 diff
(97.4 %id)
TI_1948081755   .b 324 to 933 128 to 739       612/1179
(51 %)
15 diff
(98.8 %id)
TI_1948081756   .b 324 to 1194 131 to 1016       886/1409
(62 %)
12 diff
(99.2 %id)
TI_1948081972   .b 324 to 956 128 to 761       634/1120
(56 %)
34 diff
(97.0 %id)
TI_1948081981   .b 324 to 1084 126 to 886       761/1136
(66 %)
23 diff
(98.0 %id)
TI_1948081982   .b 324 to 1126 131 to 940       810/1367
(59 %)
22 diff
(98.4 %id)
TI_1948082182   .b 324 to 1057 135 to 880       746/1422
(52 %)
22 diff
(98.5 %id)
TI_1948082190   .b 324 to 1005 135 to 818       684/1407
(48 %)
6 diff
(99.6 %id)
TI_1948082406   .b 324 to 1157 129 to 972     Submitted on the opposite strand 844/1061
(79 %)
29 diff
(97.3 %id)
TI_1948082416   .b 324 to 1120 133 to 945       813/1342
(60 %)
48 diff
(96.5 %id)
TI_1948081973   .b 325 to 871 149 to 709       561/1366
(41 %)
39 diff
(97.2 %id)
DA533229 brain .b 352 to 910 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB175572 kidney, tumor tissue .b 369 to 952 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
AU125941   .b 375 to 1096 2 to 722   capped   721/725
(99 %)
3 diff
(99.6 %id)
BU182819 melanotic melanoma, skin .b 398 to 1269 12 to 884       873/886
(98 %)
6 diff
(99.4 %id)
DA056542 cerebellum .b 426 to 1027 2 to 603   capped   602/602
(100 %)
1 diff
(99.9 %id)
DA050895   .b 477 to 1044 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BU752176 placenta .b 510 to 800 350 to 60   AAA   291/333
(87 %)
0 diff
(100 %id)
BU177330 melanotic melanoma, skin .b 533 to 1301 1 to 773       773/827
(93 %)
7 diff
(99.2 %id)
DA618130   .b 576 to 1143 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA594600 lung .b 579 to 1143 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB180333 kidney, tumor tissue .b 686 to 1248 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB000138 breast, tumor tissue .b 691 to 1157 2 to 470   capped   469/469
(100 %)
3 diff
(99.4 %id)
DA870917 Prostate .b 765 to 1338 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AL525115 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 768 to 1566 1 to 799       799/799
(100 %)
1 diff
(99.9 %id)
BE893799 melanotic melanoma, skin .b 780 to 1357 1 to 581       581/582
(99 %)
6 diff
(99.0 %id)
BP332254 renal proximal tubule .b 809 to 1390 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BX327447   .b 866 to 1597 1 to 732       732/916
(79 %)
27 diff
(97.1 %id)
BP196175 adrenal gland .b 913 to 1497 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
DB144109 thymus .b 913 to 1430 2 to 520   capped   519/519
(100 %)
3 diff
(99.5 %id)
BP196171 adrenal gland .b 914 to 1493 1 to 581       581/582
(99 %)
7 diff
(98.8 %id)
BP376766 uterus .b 953 to 1533 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
CN365705 embryonic stem cells, DMSO-treated H9 cellline .b 957 to 1582 1 to 627       627/627
(100 %)
2 diff
(99.7 %id)
DT218565 brain .b 966 to 1568 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
BE536439 cervix .b 999 to 1625 1 to 631       631/655
(96 %)
11 diff
(98.4 %id)
DA614735   .b 1003 to 1563 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BU179778 melanotic melanoma, cell line, skin .b 1027 to 1888 1 to 870       870/889
(97 %)
17 diff
(98.1 %id)
BQ678364 melanotic melanoma, cell line, skin .b 1028 to 1914 13 to 902       890/903
(98 %)
13 diff
(98.6 %id)
BM849848 myeloma .b 1183 to 1768 1 to 586       586/593
(98 %)
1 diff
(99.9 %id)
BM743184 stomach .b 1243 to 1720 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BM837320 Ascites, stomach .b 1254 to 1625 1 to 371       371/373
(99 %)
13 diff
(96.6 %id)
BP209094 cerebellum .b 1264 to 1856 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BQ427525 melanotic melanoma, skin .b 1282 to 2165 1 to 895       895/896
(99 %)
15 diff
(98.4 %id)
BX372047   .b 1308 to 2218 907 to 1       907/907
(100 %)
0 diff
(100 %id)
AA465631 germinal center B cell .b 1315 to 1462 1 to 148       148/148
(100 %)
0 diff
(100 %id)
BM687177 eye, optic nerve .b 1401 to 1935 9 to 543       535/543
(98 %)
9 diff
(98.4 %id)
BE090121 breast .b 1423 to 2005 13 to 596       584/596
(97 %)
6 diff
(99.0 %id)
AA319888 adipose tissue, white .b 1484 to 1677 1 to 195       195/196
(99 %)
2 diff
(99.0 %id)
BM764355 Ascites, stomach .b 1485 to 2077 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BM739716 Ascites, stomach .b 1485 to 1960 1 to 476       476/476
(100 %)
2 diff
(99.6 %id)
BM739717 Ascites, stomach .b 1485 to 2038 1 to 555       555/555
(100 %)
5 diff
(99.1 %id)
BM738063 Ascites, stomach .b 1486 to 1921 1 to 432       432/432
(100 %)
5 diff
(98.9 %id)
BE896109 melanotic melanoma, skin .b 1499 to 2208 1 to 701       701/913
(76 %)
20 diff
(97.9 %id)
CB149159 Liver .b 1501 to 2092 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
BP293047 lung .b 1532 to 2112 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BE743481 adenocarcinoma cell line, ovary .b 1563 to 2304 1 to 738       738/926
(79 %)
19 diff
(98.0 %id)
BM785882 Ascites, stomach .b 1632 to 2224 1 to 593       593/593
(100 %)
0 diff
(100 %id)
TI_1948082191   .b 1633 to 2617 1107 to 131       977/1121
(87 %)
0 diff
(100 %id)
CB113253 Liver .b 1643 to 2137 1 to 495       495/495
(100 %)
2 diff
(99.6 %id)
EH349755   .b 1659 to 1715 1 to 57       57/57
(100 %)
1 diff
(98.3 %id)
TI_1948081748   .b 1709 to 2617 1034 to 133       902/1036
(87 %)
0 diff
(100 %id)
TI_1948082417   .b 1713 to 2617 1024 to 128       897/1100
(81 %)
0 diff
(100 %id)
TI_1948082183   .b 1727 to 2617 1047 to 133       915/1072
(85 %)
0 diff
(100 %id)
AL525114 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1988 to 2854 867 to 1       867/867
(100 %)
10 diff
(98.9 %id)
BF690579 melanotic melanoma, high MDR (cell line), skin .b 2001 to 2820 825 to 2       824/1044
(78 %)
0 diff
(100 %id)
TI_1948082405   .b 2192 to 2618 571 to 138     Submitted on the opposite strand 434/1422
(30 %)
0 diff
(100 %id)
AU153510   .b 2298 to 2869 571 to 1       571/577
(98 %)
12 diff
(98.0 %id)
AU158941 thyroid gland .b 2326 to 2869 543 to 1       543/543
(100 %)
14 diff
(97.5 %id)
AU153228   .b 2339 to 2869 529 to 1       529/529
(100 %)
11 diff
(98.0 %id)
AU149501   .b 2341 to 2873 533 to 1       533/559
(95 %)
4 diff
(99.3 %id)
AA455250 germinal center B cell .b 2438 to 2870 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
BM672562 eye, optic nerve .b 2464 to 2860 415 to 19   AAA   397/397
(100 %)
0 diff
(100 %id)
BX475562   .c 1 to 689 1 to 688   tiling clone,   688/688
(100 %)
3 diff
(99.6 %id)
DA101925 cerebellum .c 291 to 858 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA630860 Kidney .c 299 to 866 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA762226 tongue .c 299 to 862 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA149172 amygdala .c 302 to 869 2 to 570   capped   569/570
(99 %)
2 diff
(99.7 %id)
NM_014948.2   .c 306 to 4633 1 to 4328 exact RefSeq, AAA   4328/4328
(100 %)
0 diff
(100 %id)
DA556320   .c 307 to 870 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
AU099495   .c 307 to 587 20 to 300       281/300
(93 %)
6 diff
(98.0 %id)
DA031047   .c 308 to 877 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA653857   .c 308 to 838 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DB273447 uterus .c 308 to 866 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA160911 amygdala .c 309 to 882 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA603685   .c 309 to 817 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA699049   .c 309 to 768 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DA847616 placenta .c 309 to 865 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB263358 uterus .c 310 to 877 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP200362 amygdala .c 311 to 892 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA200632 brain .c 312 to 903 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DN997099 breast cancer, Mammary gland (cancer tissue) .c 313 to 1031 1 to 719       719/719
(100 %)
6 diff
(99.2 %id)
DA477345   .c 315 to 876 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BP204409 coronary artery .c 318 to 883 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
BP222342   .c 318 to 899 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA134990 alzheimer cortex .c 319 to 877 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA210697 brain .c 319 to 887 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA623575 Kidney .c 319 to 866 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB258594 uterus .c 319 to 850 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
AB020667 brain .c 322 to 4633 1 to 4313 exact tiling clone, available from KIAA,   4313/4313
(100 %)
10 diff
(99.8 %id)
TI_57220550   .c 322 to 1162 15 to 866       852/1066
(79 %)
25 diff
(97.7 %id)
AL520137 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 324 to 1348 27 to 1043       1017/1091
(93 %)
17 diff
(98.5 %id)
DA939576 Spleen .c 327 to 914 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA588438 lung .c 329 to 902 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA567523   .c 330 to 870 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB123223 thymus .c 330 to 881 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM477285 lymph, lymphoma, cell line .c 331 to 1395 1 to 1066       1066/1071
(99 %)
27 diff
(97.5 %id)
DA905205   .c 331 to 809 2 to 480   capped   479/479
(100 %)
0 diff
(100 %id)
CN361894 embryonic stem cells, cell lines H1, H7, andH9 .c 342 to 1092 1 to 751       751/751
(100 %)
4 diff
(99.5 %id)
AL520515 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 342 to 1409 1 to 1053       1053/1085
(97 %)
23 diff
(97.9 %id)
BX443613 T cells (Jurkat cell line) .c 342 to 1467 1 to 1122       1122/1122
(100 %)
21 diff
(98.2 %id)
BI754904 brain .c 344 to 1190 1 to 849       849/849
(100 %)
4 diff
(99.6 %id)
BG828971 muscle, rhabdomyosarcoma .c 345 to 1054 1 to 716       716/717
(99 %)
10 diff
(98.7 %id)
DA333803 hippocampus .c 350 to 951 2 to 603   capped   602/602
(100 %)
1 diff
(99.9 %id)
AK222876 Liver .c 365 to 2595 1 to 2231 V489A AAA   2231/2231
(100 %)
1 diff
(100.0 %id)
BC000515 Lung, small cell carcinoma .c 370 to 2597 1 to 2228 exact available from MGC, AAA   2228/2228
(100 %)
0 diff
(100 %id)
CR457089   .c 476 to 2097 1 to 1622       1622/1626
(99 %)
1 diff
(100.0 %id)
TI_1948154496   .c 476 to 1312 129 to 957   fully sequenced,   829/957
(86 %)
8 diff
(99.2 %id)
TI_1948154651   .c 476 to 1261 123 to 907   fully sequenced,   785/907
(86 %)
6 diff
(99.4 %id)
TI_1948154811   .c 476 to 1291 128 to 947   fully sequenced, AAA   820/947
(86 %)
14 diff
(98.6 %id)
TI_1948154970   .c 476 to 1289 128 to 936   fully sequenced,   809/936
(86 %)
8 diff
(99.2 %id)
BX350239 Placenta Cot 25-normalized .c 894 to 1802 908 to 1       908/913
(99 %)
21 diff
(97.7 %id)
BF306315 muscle, rhabdomyosarcoma .c 1031 to 1819 1 to 777       777/781
(99 %)
23 diff
(97.1 %id)
BI089456 cervix .c 1108 to 2021 7 to 923       922/924
(99 %)
35 diff
(96.3 %id)
TI_1948154652   .c 1231 to 2107 995 to 122   fully sequenced,   874/995
(87 %)
14 diff
(98.6 %id)
CN484275 eye .c 1258 to 1871 1 to 614       614/614
(100 %)
0 diff
(100 %id)
TI_1948154971   .c 1259 to 2107 979 to 121   fully sequenced,   859/979
(87 %)
9 diff
(99.1 %id)
TI_1948154812   .c 1261 to 2107 969 to 120   fully sequenced,   850/969
(87 %)
8 diff
(99.2 %id)
TI_1948154497   .c 1282 to 2107 946 to 122   fully sequenced,   825/946
(87 %)
3 diff
(99.7 %id)
AL520514 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1439 to 2560 1116 to 6       1111/1116
(99 %)
13 diff
(98.9 %id)
AL520136 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1539 to 2582 1031 to 1       1031/1120
(92 %)
18 diff
(98.4 %id)
BX382277 Placenta Cot 25-normalized .c 1652 to 2584 932 to 1       932/932
(100 %)
3 diff
(99.7 %id)
M78818   .c 1692 to 2051 1 to 360       360/360
(100 %)
1 diff
(99.8 %id)
BM691689 eye, RPE and Choroid .c 1695 to 2146 8 to 459       452/459
(98 %)
1 diff
(99.8 %id)
TI_154130768   .c 1719 to 2595 963 to 91   AAA   873/949
(91 %)
9 diff
(99.1 %id)
BF219882 lung, small cell carcinoma .c 1811 to 2522 716 to 2       715/729
(98 %)
14 diff
(98.1 %id)
BU187106 epithelioid carcinoma, Pancreas .c 1812 to 2579 6 to 786       781/859
(90 %)
37 diff
(95.7 %id)
BC064544 Brain, hippocampus .d 1 to 2227 4 to 2230 T509P tiling clone, available from MGC, AAA   2230/2230
(100 %)
1 diff
(100.0 %id)
AL521443 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .d 13 to 979 1 to 962       962/962
(100 %)
5 diff
(99.5 %id)
AL521442 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .d 1218 to 2192 969 to 1       969/969
(100 %)
15 diff
(98.5 %id)
DA819449   .d 1312 to 1866 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
TI_149301720   .d 1424 to 2227 898 to 97   AAA   802/939
(85 %)
13 diff
(98.7 %id)
BM887632 eye .d 1546 to 2082 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
BU682787 lung .d 1562 to 2225 682 to 19   AAA   664/664
(100 %)
1 diff
(99.9 %id)
BM983023 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 1572 to 2225 671 to 19   AAA   653/663
(98 %)
0 diff
(100 %id)
BM980040 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 1592 to 2227 654 to 19   tiling clone, AAA   636/636
(100 %)
1 diff
(99.9 %id)
BQ000318 Fibrosarcoma .d 1594 to 2227 652 to 19   AAA   634/634
(100 %)
1 diff
(99.9 %id)
BU634150 cell lines, Chondrosarcoma .d 1594 to 2224 649 to 19   AAA   631/631
(100 %)
0 diff
(100 %id)
CA419210 Chondrosarcoma Grade II, Left Pelvis .d 1644 to 2225 600 to 19   AAA   582/582
(100 %)
1 diff
(99.9 %id)
BM142713 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .d 1645 to 2227 583 to 1       583/583
(100 %)
5 diff
(99.2 %id)
BU627509 Bone, Enchondroma cell line .d 1748 to 2223 496 to 21       476/496
(95 %)
0 diff
(100 %id)
AW000930 Kidney .d 1752 to 2227 478 to 3       476/478
(99 %)
0 diff
(100 %id)
BE673075 pooled germ cell tumors .d 1752 to 2224 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI273424 adenocarcinoma, colon .d 1773 to 2226 454 to 1       454/454
(100 %)
3 diff
(99.4 %id)
AW025310 Kidney .d 1779 to 2224 462 to 16   AAA   447/447
(100 %)
14 diff
(96.9 %id)
N51996 multiple sclerosis lesions .d 1818 to 2225 411 to 3       409/411
(99 %)
0 diff
(100 %id)
AI580381 Kidney .d 1819 to 2225 408 to 1       408/408
(100 %)
4 diff
(99.1 %id)
BF594422 colon, colon tumor, RER+ .d 1834 to 2225 412 to 22   AAA   391/391
(100 %)
2 diff
(99.5 %id)
AA707742 pineal gland .d 1874 to 2233 364 to 6       359/364
(98 %)
0 diff
(100 %id)
AI766166 2 pooled tumors (clear cell type), Kidney .d 1880 to 2220 345 to 5       341/345
(98 %)
0 diff
(100 %id)
AW592823 pooled .d 1893 to 2220 332 to 5       328/332
(98 %)
0 diff
(100 %id)
AI280555 ovary, tumor, 5 pooled (see description) .d 1918 to 2216 299 to 1       299/299
(100 %)
0 diff
(100 %id)
AI214844   .d 1922 to 2224 306 to 4       303/306
(99 %)
0 diff
(100 %id)
AI357716 Kidney, renal cell tumor .d 1925 to 2227 307 to 5       303/307
(98 %)
0 diff
(100 %id)
H73317 liver and spleen .d 1933 to 2225 304 to 11       294/304
(96 %)
0 diff
(100 %id)
AI023925 parathyroid gland, parathyroid tumor .d 1945 to 2225 288 to 8       281/288
(97 %)
0 diff
(100 %id)
AA860534 parathyroid gland, parathyroid tumor .d 1954 to 2225 279 to 8       272/279
(97 %)
0 diff
(100 %id)
AA514470 colon .d 1963 to 2235 296 to 24   AAA   273/273
(100 %)
1 diff
(99.7 %id)
CB243603 Human Lung Epithelial cells, lung .d 2058 to 2227 188 to 19   AAA   170/181
(93 %)
0 diff
(100 %id)
AI248581 liver and spleen .d 2073 to 2224 154 to 3       152/154
(98 %)
0 diff
(100 %id)
BG471488 eye, retinoblastoma .d 2121 to 2830 2 to 715       714/715
(99 %)
6 diff
(99.2 %id)
BE250780 eye, retinoblastoma .d 2140 to 2700 1 to 561   tiling clone,   561/564
(99 %)
2 diff
(99.7 %id)
BE252871 eye, retinoblastoma .d 2140 to 2559 1 to 420       420/420
(100 %)
0 diff
(100 %id)
BG679846 skin, squamous cell carcinoma .d 2330 to 3067 1 to 740   tiling clone,   740/808
(91 %)
17 diff
(97.9 %id)
BI907892 leukocyte .d 2587 to 3246 1 to 675   tiling clone,   675/844
(79 %)
11 diff
(98.7 %id)
TI_57235061   .d 2587 to 3246 107 to 781       675/950
(71 %)
11 diff
(98.9 %id)
CD626422   .d 3224 to 3429 1 to 206   tiling clone,   206/210
(98 %)
4 diff
(98.1 %id)
CN361898 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 3561 to 4091 1 to 531   tiling clone,   531/531
(100 %)
1 diff
(99.9 %id)
BM992259 Bone, Subchondral Bone .d 3660 to 4263 623 to 19   AAA   605/605
(100 %)
2 diff
(99.7 %id)
CD626421   .d 3726 to 3958 247 to 15       233/251
(92 %)
0 diff
(100 %id)
AI972752 Prostate .d 3733 to 4263 531 to 1   tiling clone,   531/531
(100 %)
1 diff
(99.9 %id)
AL523548 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 3805 to 4262 1 to 457       457/457
(100 %)
2 diff
(99.6 %id)
TI_151771628   .d 3851 to 4264 104 to 517       414/509
(81 %)
8 diff
(98.5 %id)
CA436537 Bone, Subchondral Bone .d 3863 to 4263 419 to 19   AAA   401/401
(100 %)
4 diff
(99.1 %id)
AI440181 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3942 to 4263 344 to 23   AAA   322/322
(100 %)
4 diff
(98.8 %id)
BX369736 Neuroblastoma Cot 25-normalized .d 4138 to 4264 1 to 126   tiling clone,   126/133
(94 %)
9 diff
(93.3 %id)
DR978426 brain .d 4198 to 4264 1 to 66     Submitted on the opposite strand 66/75
(88 %)
6 diff
(92.0 %id)
DA730689   .e 1 to 737 2 to 738   tiling clone, capped   737/737
(100 %)
0 diff
(100 %id)
NM_199415.1   .e 8 to 4173 1 to 4166 exact RefSeq, AAA   4166/4166
(100 %)
0 diff
(100 %id)
AK222570 coronary artery .e 20 to 2129 1 to 2110 E290G C432Y tiling clone, AAA   2110/2110
(100 %)
2 diff
(100.0 %id)
AK022444 mammary gland .e 28 to 2135 1 to 2108 exact tiling clone, available from FLJ,   2108/2108
(100 %)
5 diff
(99.8 %id)
AU122539 mammary gland .e 29 to 811 2 to 788   capped   787/788
(99 %)
15 diff
(98.1 %id)
DA869584 Prostate .e 31 to 571 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
BC046122 Lymph, lymphoma .e 32 to 2134 1 to 2103 exact available from MGC, AAA   2103/2103
(100 %)
0 diff
(100 %id)
DA828969 placenta .e 32 to 725 2 to 704   capped   703/709
(99 %)
17 diff
(97.7 %id)
BG481288 choriocarcinoma, placenta .e 40 to 937 1 to 907       907/1056
(85 %)
38 diff
(96.5 %id)
BI757338 brain .e 40 to 864 1 to 834       834/1034
(80 %)
20 diff
(98.1 %id)
DA285714 corpus callosum .e 41 to 532 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
AU129412   .e 41 to 789 2 to 752   capped   751/751
(100 %)
14 diff
(98.2 %id)
DA747041   .e 41 to 607 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA753997   .e 41 to 596 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA886680   .e 41 to 572 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA996649   .e 41 to 575 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB117626 thymus .e 41 to 605 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA555887   .e 43 to 610 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
TI_57218456   .e 46 to 892 39 to 887       849/887
(95 %)
8 diff
(99.1 %id)
BX462521 T cells (Jurkat cell line) .e 47 to 1084 1 to 1024       1024/1029
(99 %)
41 diff
(96.1 %id)
BX331365 Neuroblastoma Cot 10-normalized .e 53 to 897 1 to 844       844/844
(100 %)
10 diff
(98.9 %id)
BM548344 brain, hippocampus .e 61 to 944 11 to 901       891/1085
(82 %)
27 diff
(97.6 %id)
CF551920 Pooled muscle (cardiac and skeletal) .e 61 to 893 24 to 856       833/857
(97 %)
9 diff
(99.0 %id)
CN361893 embryonic stem cells, cell lines H1, H7, andH9 .e 64 to 794 1 to 731       731/731
(100 %)
2 diff
(99.8 %id)
AW245534 lung, small cell carcinoma .e 64 to 633 2 to 571       570/571
(99 %)
5 diff
(99.2 %id)
BE974194 Prostate .e 69 to 664 1 to 590       590/591
(99 %)
16 diff
(97.3 %id)
CN361896 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 71 to 450 1 to 381       381/381
(100 %)
2 diff
(99.5 %id)
DB232616 trachea .e 71 to 624 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BM808548 brain, hippocampus .e 72 to 1042 1 to 981   available from MGC,   981/993
(98 %)
27 diff
(97.3 %id)
DA359573 subthalamic nucleus .e 75 to 628 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
CN361892 embryonic stem cells, DMSO-treated H9 cellline .e 75 to 449 1 to 376       376/376
(100 %)
2 diff
(99.5 %id)
BE266831 lung, small cell carcinoma .e 90 to 568 1 to 479       479/480
(99 %)
7 diff
(98.6 %id)
BF220115 lung, small cell carcinoma .e 91 to 716 1 to 630       630/630
(100 %)
4 diff
(99.4 %id)
CN361895 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 93 to 361 1 to 269       269/269
(100 %)
4 diff
(98.6 %id)
DA665972   .e 136 to 603 83 to 551   capped   470/550
(85 %)
7 diff
(98.8 %id)
CV026156 mixed .e 178 to 381 1 to 205       205/207
(99 %)
10 diff
(95.2 %id)
R61155 whole brain .e 215 to 673 1 to 470       470/476
(98 %)
24 diff
(95.0 %id)
BP332116 renal proximal tubule .e 236 to 817 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
TI_159677291   .e 254 to 1111 63 to 913       851/1107
(76 %)
6 diff
(99.5 %id)
BP222294   .e 295 to 876 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
CD513583 brain, Pituitary .e 415 to 1261 1 to 853       853/881
(96 %)
13 diff
(98.6 %id)
BM480008 embryonal carcinoma, cell line, testis .e 472 to 1424 1 to 960       960/1024
(93 %)
20 diff
(98.1 %id)
AW970155   .e 500 to 1071 1 to 573       573/573
(100 %)
11 diff
(98.1 %id)
BX100882 whole brain .e 615 to 1142 1 to 533       533/533
(100 %)
8 diff
(98.5 %id)
R53251 whole brain .e 617 to 1089 1 to 485       485/486
(99 %)
19 diff
(96.1 %id)
AA324619 brain, cerebellum .e 648 to 1007 1 to 360       360/365
(98 %)
2 diff
(99.5 %id)
AW955213   .e 650 to 1284 1 to 635       635/636
(99 %)
4 diff
(99.4 %id)
BF308861 muscle, rhabdomyosarcoma .e 732 to 1434 1 to 697       697/948
(73 %)
19 diff
(98.0 %id)
BE298876 muscle, rhabdomyosarcoma .e 752 to 1403 1 to 643       643/728
(88 %)
9 diff
(98.8 %id)
BE294394 muscle, rhabdomyosarcoma .e 752 to 1403 1 to 648       648/704
(92 %)
6 diff
(99.2 %id)
BE296416 muscle, rhabdomyosarcoma .e 752 to 1430 1 to 679       679/717
(94 %)
1 diff
(99.9 %id)
W37726 parathyroid gland, parathyroid tumor .e 754 to 1029 1 to 274       274/276
(99 %)
4 diff
(98.6 %id)
BE816889 breast_normal .e 771 to 999 229 to 2       228/243
(93 %)
0 diff
(100 %id)
BE816938 breast_normal .e 771 to 994 228 to 5       224/242
(92 %)
0 diff
(100 %id)
TI_149298347   .e 1239 to 2135 961 to 85   AAA   877/960
(91 %)
20 diff
(98.0 %id)
TI_149314045   .e 1240 to 2134 970 to 88   AAA   883/972
(90 %)
18 diff
(98.2 %id)
BU848845 ovary, teratocarcinoma, cell line .e 1263 to 2080 1 to 825   AAA   825/899
(91 %)
16 diff
(98.3 %id)
R98607 liver and spleen .e 1319 to 1753 1 to 438   fully sequenced,   440/440
(100 %)
8 diff
(98.2 %id)
BM263140 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .e 1354 to 1875 1 to 521       521/521
(100 %)
6 diff
(98.9 %id)
H49183 liver and spleen .e 1366 to 1632 1 to 268       270/273
(98 %)
4 diff
(98.6 %id)
W85749 liver and spleen .e 1366 to 1820 1 to 467   fully sequenced,   466/466
(100 %)
17 diff
(96.4 %id)
W86371 liver and spleen .e 1367 to 1806 1 to 444       444/445
(99 %)
6 diff
(98.7 %id)
DA817772   .e 1373 to 1834 2 to 463   capped   462/462
(100 %)
2 diff
(99.6 %id)
BM824171 Ascites, stomach .e 1378 to 1914 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
BQ446617 Knee, Osteoarthritic Cartilage .e 1388 to 2135 766 to 19   AAA   748/748
(100 %)
3 diff
(99.6 %id)
CB305845 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1430 to 2134 723 to 19   AAA   705/725
(97 %)
3 diff
(99.6 %id)
TI_149293767   .e 1432 to 2135 787 to 87   AAA   701/924
(75 %)
4 diff
(99.6 %id)
AU148099 mammary gland .e 1585 to 2135 542 to 1       542/542
(100 %)
16 diff
(97.1 %id)
AU148620   .e 1601 to 2135 532 to 1       532/541
(98 %)
18 diff
(96.7 %id)
H49371 liver and spleen .e 1651 to 2131 492 to 9       484/542
(89 %)
0 diff
(100 %id)
DB366680   .e 1680 to 2137 455 to 1       455/506
(89 %)
23 diff
(95.5 %id)
R98608 liver and spleen .e 1744 to 2135 396 to 4   fully sequenced,   393/396
(99 %)
0 diff
(100 %id)
W85695 liver and spleen .e 1790 to 2136 357 to 1   fully sequenced,   357/357
(100 %)
9 diff
(97.5 %id)
BX414185 T cells (Jurkat cell line) .e 1810 to 2134 323 to 1       323/364
(88 %)
12 diff
(96.8 %id)
W86307 liver and spleen .e 1863 to 2134 275 to 3       273/275
(99 %)
0 diff
(100 %id)
DB373614 placenta .e 1863 to 2135 272 to 1       272/272
(100 %)
10 diff
(96.4 %id)
W37727 parathyroid gland, parathyroid tumor .e 1867 to 2135 271 to 1       271/273
(99 %)
3 diff
(99.0 %id)
R61871 whole brain .e 1887 to 2135 269 to 20   AAA   250/250
(100 %)
1 diff
(99.6 %id)
R53252 whole brain .e 1905 to 2134 246 to 16   AAA   231/231
(100 %)
4 diff
(98.3 %id)
BX492152   .f-u 1 to 450 1 to 450 exact tiling clone,   450/450
(100 %)
0 diff
(100 %id)
BP242086 Liver .g 1 to 580 2 to 581 P11L tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
DA383092 thalamus .h 1 to 572 4 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA175913 amygdala .i 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
CD673680 eye, lens Gene UBOX5andFASTKD5, variant not shown         This clone was ignored    
BQ636619 eye, retina Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, this clone was ignored    
AV660302 corresponding non cancerous liver tissue Gene UBOX5andFASTKD5, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BX482284   Gene UBOX5andFASTKD5, variant not shown              
AK301748 testis Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, this clone was ignored    
AK027215 Human lung Gene UBOX5andFASTKD5, variant not shown       available from FLJ, AAA This clone was ignored    
DB360680 mammary gland Gene UBOX5andFASTKD5, variant not shown              
DA646049 mammary gland Gene UBOX5andFASTKD5, variant not shown       capped      
DA077221 cerebellum Gene UBOX5andFASTKD5, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI760767 2 pooled tumors (clear cell type), Kidney Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, this clone was ignored    
BF590584 colon, colon tumor, RER+ Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, this clone was ignored    
BG165140 hypernephroma, cell line, Kidney Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, this clone was ignored    
DA794594 brain Gene UBOX5andFASTKD5, variant not shown       capped Suspected internal deletion, this clone was ignored    
DC395013 testis Gene UBOX5andFASTKD5, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d, .e, .f-u, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI