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Gene UAP1L1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
100 supporting clones for gene UAP1L1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX333979 Neuroblastoma Cot 50-normalized .a 1 to 857 1 to 856   tiling clone,   856/856
(100 %)
2 diff
(99.8 %id)
NM_207309.2   .a 1 to 3364 1 to 3364 exact RefSeq, AAA   3364/3364
(100 %)
0 diff
(100 %id)
BX400904   .a 35 to 932 1 to 898       898/898
(100 %)
4 diff
(99.6 %id)
CR979381 T-Lymphocytes .a 127 to 458 1 to 332   tiling clone,   332/332
(100 %)
2 diff
(99.4 %id)
AL832421 melanoma (MeWo cell line) .a 244 to 3364 13 to 3133   tiling clone, available from DKFZ, AAA   3121/3121
(100 %)
1 diff
(100.0 %id)
AK095393 tongue, tumor tissue .a 260 to 3359 1 to 3100   available from FLJ,   3100/3100
(100 %)
4 diff
(99.9 %id)
DA445273 tongue, tumor tissue .a 261 to 821 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BC106035 Skin, melanotic melanoma. .a 289 to 3364 1 to 3078   AAA   3078/3078
(100 %)
8 diff
(99.8 %id)
BQ226014 melanotic melanoma, skin .a 290 to 1044 1 to 771       771/876
(88 %)
46 diff
(94.8 %id)
CV362100 nervous_normal .a 344 to 914 588 to 22     Submitted on the opposite strand 567/595
(95 %)
7 diff
(98.9 %id)
TI_2194645866   .a 428 to 1470 57 to 1094     Submitted on the opposite strand 1038/1255
(82 %)
18 diff
(98.6 %id)
TI_2194646094   .a 428 to 1444 61 to 1088     Submitted on the opposite strand 1028/1088
(94 %)
42 diff
(96.2 %id)
BC136391 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 434 to 2343 1 to 1910       1910/1910
(100 %)
2 diff
(99.9 %id)
DN999773   .a 472 to 1058 8 to 594       587/594
(98 %)
6 diff
(99.0 %id)
CV362086 nervous_normal .a 545 to 877 393 to 67     Submitted on the opposite strand 329/393
(83 %)
1 diff
(99.8 %id)
CV362109 nervous_normal .a 552 to 895 374 to 31     Submitted on the opposite strand 344/374
(91 %)
2 diff
(99.5 %id)
CV362120 nervous_normal .a 558 to 867 353 to 49     Submitted on the opposite strand 305/353
(86 %)
1 diff
(99.8 %id)
CV362102 nervous_normal .a 577 to 895 339 to 25     Submitted on the opposite strand 317/339
(93 %)
7 diff
(98.0 %id)
TI_154197706   .a 583 to 1106 80 to 605       524/980
(53 %)
18 diff
(98.2 %id)
TI_154196074   .a 588 to 1399 19 to 827       809/1062
(76 %)
17 diff
(98.4 %id)
TI_2194642843   .a 596 to 1115 1 to 520       520/520
(100 %)
6 diff
(98.9 %id)
CK819561 Islets of Langerhans, Pancreas .a 683 to 1285 1 to 603       603/603
(100 %)
0 diff
(100 %id)
BM129547 Islets of Langerhans, Pancreas .a 699 to 1280 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BF834702 head_neck .a 757 to 1069 338 to 25     Submitted on the opposite strand 314/338
(92 %)
0 diff
(100 %id)
BE617125 adenocarcinoma, colon .a 761 to 1393 1 to 624       624/890
(70 %)
22 diff
(97.6 %id)
TI_2194642840   .a 960 to 1325 1 to 364       364/364
(100 %)
10 diff
(97.3 %id)
DB250381 uterus .a 1012 to 1525 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
DA730734   .a 1021 to 1849 2 to 827   capped   826/828
(99 %)
12 diff
(98.6 %id)
BQ880583 dorsal root ganglia .a 1045 to 1910 1 to 871       871/928
(93 %)
24 diff
(97.5 %id)
DA493674 brain .a 1076 to 1600 2 to 529   capped   528/528
(100 %)
5 diff
(99.1 %id)
DA620113   .a 1082 to 1675 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
CA453923   .a 1095 to 1968 29 to 909       881/909
(96 %)
27 diff
(97.1 %id)
TI_2194643710   .a 1213 to 1434 22 to 243       222/243
(91 %)
11 diff
(95.5 %id)
AU124430   .a 1213 to 1939 2 to 732   capped   731/762
(95 %)
6 diff
(99.3 %id)
TI_2194645485   .a 1223 to 2358 1163 to 40     Submitted on the opposite strand 1124/1265
(88 %)
17 diff
(98.7 %id)
TI_1968235399   .a 1402 to 2351 1080 to 139       942/1247
(75 %)
7 diff
(99.5 %id)
AA316011 lung .a 1419 to 1747 1 to 329       329/329
(100 %)
3 diff
(99.1 %id)
AW961353   .a 1420 to 2009 1 to 590       590/591
(99 %)
10 diff
(98.4 %id)
BX400903   .a 2426 to 3336 910 to 1       910/910
(100 %)
4 diff
(99.6 %id)
BX333978 Neuroblastoma Cot 50-normalized .a 2428 to 3299 873 to 1       873/873
(100 %)
3 diff
(99.7 %id)
DB362684   .a 2817 to 3359 544 to 1       544/549
(99 %)
11 diff
(98.0 %id)
DB313934 tongue, tumor tissue .a 2826 to 3359 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
AK128529 trachea .b 1 to 3200 2 to 3201 A196V tiling clone, available from FLJ,   3201/3201
(100 %)
2 diff
(100.0 %id)
DB220967 trachea .b 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AK022632   .b 950 to 3204 1 to 2255   tiling clone, available from FLJ,   2255/2255
(100 %)
2 diff
(100.0 %id)
AA180525 brain, neuroepithelial cells .b 950 to 1428 1 to 477   tiling clone,   477/477
(100 %)
12 diff
(97.5 %id)
AU125020   .b 951 to 1806 2 to 864   capped   863/873
(98 %)
18 diff
(98.0 %id)
DA938221 Spleen .b 954 to 1546 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
BQ929386 epidermoid carcinoma, cell line, lung .b 973 to 1604 1 to 634       634/1028
(61 %)
9 diff
(99.2 %id)
BQ883021 eye, normal pigmented retinal epithelium .b 979 to 1651 1 to 684       684/1018
(67 %)
27 diff
(97.4 %id)
TI_2194646091   .b 1296 to 2192 938 to 42     Submitted on the opposite strand 897/965
(92 %)
0 diff
(100 %id)
TI_57168549   .b 1365 to 2096 34 to 764       731/764
(95 %)
6 diff
(99.3 %id)
BI833135 pooled pancreas and spleen .b 1371 to 2096 1 to 726       726/726
(100 %)
10 diff
(98.7 %id)
BQ051862 blood, natural killer cells, cell line .b 1390 to 2240 1 to 857       857/1031
(83 %)
40 diff
(96.2 %id)
TI_2194645191   .b 1461 to 2192 770 to 41     Submitted on the opposite strand 730/841
(86 %)
0 diff
(100 %id)
BQ422575 embryonal carcinoma, cell line, testis .b 1466 to 1973 1 to 509       509/1046
(48 %)
10 diff
(99.1 %id)
BI116762 lung, small cell carcinoma .b 1514 to 2218 1 to 698   available from MGC,   698/698
(100 %)
25 diff
(96.5 %id)
BC041644 Lung, small cell carcinoma .b 1515 to 3198 1 to 1684   available from MGC, AAA   1684/1684
(100 %)
0 diff
(100 %id)
CB150187 Liver .b 1570 to 1782 1 to 213       213/213
(100 %)
6 diff
(97.2 %id)
TI_2194642838   .b 1593 to 1875 1 to 282       282/282
(100 %)
10 diff
(96.5 %id)
TI_2194643567   .b 1604 to 1754 9 to 158       150/158
(94 %)
6 diff
(96.3 %id)
BU622635 cell lines, Chondrosarcoma .b 1615 to 2259 672 to 29       644/672
(95 %)
0 diff
(100 %id)
BC010529 Brain, glioblastoma with EGFR amplification .b 1632 to 3193 1 to 1562   available from MGC, AAA   1562/1562
(100 %)
0 diff
(100 %id)
BF933012 nervous_tumor .b 1713 to 2019 307 to 1     Submitted on the opposite strand 307/309
(99 %)
0 diff
(100 %id)
BC012838 Ovary, adenocarcinoma .b 1713 to 3198 1 to 1486   available from MGC, AAA   1486/1486
(100 %)
0 diff
(100 %id)
ES309755 scalp interfollicular dermis, skin .b 1733 to 2229 1 to 497       497/497
(100 %)
5 diff
(99.0 %id)
BF036066 adenocarcinoma, ovary .b 1733 to 2390 1 to 660   available from MGC,   660/881
(74 %)
22 diff
(97.6 %id)
BG769699 melanotic melanoma, high MDR (cell line), skin .b 1753 to 2614 1 to 868       868/870
(99 %)
29 diff
(96.7 %id)
BQ670945 epidermoid carcinoma, cell line, salivary gland .b 1910 to 2585 1 to 679       679/951
(71 %)
9 diff
(99.1 %id)
AI880199 brain, oligodendroglioma .b 1963 to 2324 1 to 362     Submitted on the opposite strand 362/362
(100 %)
0 diff
(100 %id)
BF360494 ovary .b 1999 to 2259 282 to 22       261/282
(92 %)
0 diff
(100 %id)
BE894292 melanotic melanoma, skin .b 2005 to 2811 1 to 811       811/845
(95 %)
33 diff
(96.1 %id)
BM044040 carcinoma, cell line, Prostate .b 2027 to 2951 1 to 913       913/955
(95 %)
28 diff
(97.1 %id)
CD671165 eye, Iris .b 2134 to 2649 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
DT216755 brain .b 2170 to 2863 1 to 694       694/694
(100 %)
0 diff
(100 %id)
BQ063560 lymph, lymphoma, cell line .b 2202 to 3136 1 to 956       956/1044
(91 %)
46 diff
(95.6 %id)
BF884085 lung_tumor .b 2280 to 2674 405 to 11     Submitted on the opposite strand 395/405
(97 %)
0 diff
(100 %id)
TI_154007971   .b 2360 to 2999 755 to 116       640/1045
(61 %)
0 diff
(100 %id)
CA435147 lung, Lung Focal Fibrosis .b 2406 to 2999 636 to 41   AAA   596/618
(96 %)
0 diff
(100 %id)
BF529323 anaplastic oligodendroglioma with 1p/19qloss, brain .b 2572 to 3206 1 to 634       634/666
(95 %)
13 diff
(98.1 %id)
CK819560 Islets of Langerhans, Pancreas .b 2617 to 3199 589 to 7       583/589
(98 %)
0 diff
(100 %id)
BQ437535 melanotic melanoma, skin .b 2618 to 3198 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AU148777   .b 2648 to 3204 554 to 1       554/557
(99 %)
12 diff
(97.9 %id)
BM129289 Islets of Langerhans, Pancreas .b 2676 to 3199 530 to 7       524/530
(98 %)
0 diff
(100 %id)
AA604514 adrenal adenoma, adrenal gland .b 2751 to 3200 455 to 6       450/455
(98 %)
0 diff
(100 %id)
AA179706 brain, neuroepithelial cells .b 2773 to 3183 411 to 1       411/411
(100 %)
0 diff
(100 %id)
AV748128 Pituitary .b 2774 to 3194 1 to 416       416/416
(100 %)
12 diff
(97.2 %id)
BF934931 nervous_tumor .b 2783 to 3087 308 to 1     Submitted on the opposite strand 308/308
(100 %)
5 diff
(98.4 %id)
BF934932 nervous_tumor .b 2793 to 3032 249 to 9     Submitted on the opposite strand 241/249
(96 %)
0 diff
(100 %id)
AI268812 carcinoid, lung .b 2862 to 3165 1 to 304     Submitted on the opposite strand 304/304
(100 %)
0 diff
(100 %id)
BM272219 Pancreas, Purified pancreatic islet .b 2875 to 3188 1 to 314     Submitted on the opposite strand 314/314
(100 %)
0 diff
(100 %id)
AA757474 pineal gland .b 2875 to 3199 332 to 9       324/332
(97 %)
0 diff
(100 %id)
AI926124 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2894 to 3195 304 to 1       304/305
(99 %)
9 diff
(97.1 %id)
CD106459 brain, Pituitary .b 2909 to 3198 24 to 313   AAA   290/313
(92 %)
6 diff
(98.1 %id)
BQ232243 embryonal carcinoma, cell line, testis .b 2917 to 3193 1 to 277   AAA   277/277
(100 %)
0 diff
(100 %id)
BG056072 anaplastic oligodendroglioma, brain .b 2977 to 3198 222 to 1       222/222
(100 %)
0 diff
(100 %id)
C01904   .b 3073 to 3198 1 to 126       126/126
(100 %)
0 diff
(100 %id)
BU180917 embryonal carcinoma, cell line, testis .c 1 to 621 4 to 633   tiling clone,   630/954
(66 %)
23 diff
(97.6 %id)
AK074143 Spleen .c 401 to 4811 1 to 4413   tiling clone, available from FLJ,   4413/4413
(100 %)
9 diff
(99.8 %id)
DB463930 hippocampus .c 1024 to 1277 1 to 260       260/301
(86 %)
14 diff
(95.4 %id)
DA302834 hippocampus .c 1161 to 1699 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
CN265248 embryonic stem cells, cell lines H1, H7, andH9 .c 2266 to 2837 1 to 572       572/572
(100 %)
5 diff
(99.2 %id)
BF366349 nervous_tumor .c 2691 to 2912 221 to 1   tiling clone,   221/221
(100 %)
6 diff
(97.3 %id)
CR978238 T-Lymphocytes .d-u 1 to 393 1 to 393 G129X tiling clone,   393/395
(99 %)
1 diff
(99.8 %id)
DB092747 testis .e 1 to 402 2 to 403 V28X E47* tiling clone, capped   402/402
(100 %)
1 diff
(99.8 %id)
TI_2016730321   Gene UAP1L1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C