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Gene TXKTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
51 supporting clones for gene TXK back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
L27071 blood .a 1 to 2563 1 to 2564 R45H tiling clone,   2564/2564
(100 %)
4 diff
(99.9 %id)
NM_003328.2   .a 1 to 2914 1 to 2914 exact RefSeq,   2914/2914
(100 %)
0 diff
(100 %id)
DA857130 placenta .a 6 to 563 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA988911 synovial membrane tissue from rheumatioidarthritis .a 8 to 587 2 to 581   tiling clone, capped   580/582
(99 %)
2 diff
(99.7 %id)
DB103575 thymus .a 8 to 564 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB155468 thymus .a 8 to 585 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA815913   .a 11 to 587 2 to 578   capped   577/578
(99 %)
2 diff
(99.7 %id)
BG483797 lung .a 27 to 769 1 to 741       741/746
(99 %)
28 diff
(96.3 %id)
TI_57230286   .a 328 to 1027 86 to 789       704/706
(99 %)
18 diff
(97.5 %id)
BI868877 adenocarcinoma, cell line, Liver .a 329 to 1027 1 to 703       703/705
(99 %)
18 diff
(97.5 %id)
BG753882 B-cells, primary B-cells from tonsils (cell line) .a 636 to 1234 1 to 600       600/733
(81 %)
7 diff
(99.1 %id)
BM562427 leukocyte .a 1386 to 2330 18 to 991   tiling clone,   974/1143
(85 %)
47 diff
(95.9 %id)
AU138216 placenta .b -11 to 372 2 to 386   capped   385/385
(100 %)
6 diff
(98.5 %id)
AU140073 placenta .b -11 to 751 2 to 770 F125S E202X E209R I210D A211C ... capped   769/779
(98 %)
15 diff
(98.1 %id)
DA842654 placenta .b -11 to 478 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
AU135626 placenta .b 1 to 742 7 to 749 E212X capped   748/751
(99 %)
6 diff
(99.3 %id)
AK300141 placenta .b 1 to 1152 5 to 1156 exact tiling clone,   1156/1156
(100 %)
4 diff
(99.7 %id)
AU136430 placenta .b 1 to 861 5 to 880 exact capped   879/888
(98 %)
18 diff
(98.0 %id)
DA835776 placenta .b 1 to 544 5 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
AU135099 placenta .b 1 to 699 3 to 711 L126X Y187S G196R R197A T199* capped   710/713
(99 %)
15 diff
(97.9 %id)
AU137964 placenta .b 1 to 677 2 to 681 G196X R205X E209K E212G T213N ... capped   680/688
(98 %)
5 diff
(99.3 %id)
BX380478 Placenta Cot 25-normalized .b 13 to 1017 1 to 993 L16F Y17M G18E V19S C20V ...     993/1002
(99 %)
38 diff
(96.3 %id)
AU137359 placenta .b 266 to 729 280 to 746 I93F S94Q D95T F96L G97E ... capped   745/750
(99 %)
12 diff
(98.4 %id)
AU118976 whole embryo, mainly head .b 433 to 1276 2 to 844   capped   843/845
(99 %)
13 diff
(98.5 %id)
BX369985 Placenta Cot 25-normalized .b 714 to 1587 1 to 870   tiling clone,   870/871
(99 %)
9 diff
(99.0 %id)
BX370006 Placenta Cot 25-normalized .b 715 to 1709 1 to 995       995/999
(99 %)
51 diff
(94.9 %id)
CB148756 Liver .b 828 to 1460 1 to 633       633/633
(100 %)
2 diff
(99.7 %id)
BQ004606 Chondrosarcoma, Left Pelvis .b 1262 to 1918 675 to 19   AAA   657/657
(100 %)
4 diff
(99.4 %id)
DB373903 placenta .b 1317 to 1882 555 to 1       555/555
(100 %)
26 diff
(95.4 %id)
DB375003 placenta .b 1343 to 1928 582 to 1       582/585
(99 %)
17 diff
(97.1 %id)
AW977017   .b 1411 to 1830 419 to 1     Submitted on the opposite strand 419/419
(100 %)
11 diff
(97.4 %id)
R79606 placenta .b 1456 to 1779 1 to 331   fully sequenced,   331/331
(100 %)
7 diff
(97.9 %id)
H12365 placenta .b 1456 to 1753 1 to 304   tiling clone, fully sequenced,   304/304
(100 %)
3 diff
(99.1 %id)
BX119536 placenta .b 1457 to 1970 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
R81620 placenta .b 1483 to 1722 1 to 245   fully sequenced,   245/245
(100 %)
3 diff
(98.8 %id)
R81839 placenta .b 1503 to 1838 18 to 364       347/373
(93 %)
12 diff
(96.8 %id)
DB376532 placenta .b 1503 to 1918 417 to 2       416/419
(99 %)
0 diff
(100 %id)
DB357212 whole embryo, mainly head .b 1511 to 2091 582 to 1       582/582
(100 %)
11 diff
(98.2 %id)
H04368 placenta .b 1533 to 1850 1 to 338       338/342
(98 %)
25 diff
(92.7 %id)
AA765195 germinal center B cell .b 1540 to 1852 313 to 1       313/313
(100 %)
2 diff
(99.4 %id)
AU158290 placenta .b 1620 to 2094 470 to 1   tiling clone,   470/537
(87 %)
10 diff
(98.2 %id)
DB377484 placenta .b 1661 to 2094 434 to 1       434/443
(97 %)
2 diff
(99.6 %id)
BQ023054 placenta .b 1675 to 2117 445 to 3   tiling clone,   443/445
(99 %)
0 diff
(100 %id)
R81361 placenta .b 1692 to 2074 391 to 1   fully sequenced,   391/391
(100 %)
9 diff
(97.7 %id)
H12312 placenta .b 1723 to 2096 386 to 1   fully sequenced,   386/386
(100 %)
11 diff
(97.2 %id)
R79607 placenta .b 1749 to 2085 348 to 1   fully sequenced,   348/348
(100 %)
10 diff
(97.2 %id)
DB374878 placenta .b 1836 to 2092 268 to 11       258/274
(94 %)
0 diff
(100 %id)
DA933496 Spleen .c 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
5 diff
(99.1 %id)
BX471176   .c 41 to 546 1 to 505   tiling clone,   505/505
(100 %)
1 diff
(99.9 %id)
FN128640 breast carcinoma .c 520 to 633 117 to 1   tiling clone, Submitted on the opposite strand 117/117
(100 %)
3 diff
(97.5 %id)
AK307055   .d 1 to 1406 2 to 1407 exact tiling clone,   1407/1407
(100 %)
2 diff
(99.9 %id)
DA003349   .d 1 to 565 2 to 567 A48G R49K N50E C51L L52F ... capped   564/566
(99 %)
2 diff
(99.7 %id)
BP320409 placenta .e 1 to 579 3 to 581   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
DA829203 placenta .e 63 to 741 2 to 682   tiling clone, capped   681/682
(99 %)
12 diff
(98.3 %id)
AU156197 placenta .e 747 to 1143 395 to 1   tiling clone,   395/395
(100 %)
3 diff
(99.3 %id)
AW868647 stomach_normal .f-u 1 to 606 1 to 604 Q3E G4V A5Q R6K N7L ... tiling clone,   604/611
(98 %)
13 diff
(97.9 %id)
AW868648 stomach_normal .f-u 5 to 606 1 to 600   tiling clone,   600/607
(98 %)
18 diff
(97.1 %id)
BX496104 Liver .g-u 1 to 581 1 to 580 S24G I29L Y36C tiling clone,   580/580
(100 %)
12 diff
(98.0 %id)
BF870694 lung_tumor .h-u 1 to 243 12 to 254 G2R tiling clone,   243/254
(95 %)
6 diff
(97.7 %id)
BC017829 lung Gene TXK, variant not shown       AAA This clone was ignored    
DN998936 bone marrow Gene TXK, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI