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Gene TUBA4ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
341 supporting clones for gene TUBA4A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ894018 brain, neuroblastoma, cell line .a 1 to 604 1 to 607   tiling clone,   607/913
(66 %)
4 diff
(99.6 %id)
BF211998 bone marrow, from chronic myelogenous leukemia .a 65 to 644 1 to 580       580/874
(66 %)
42 diff
(95.2 %id)
TI_1948079068   .a 150 to 898 131 to 882       752/1208
(62 %)
20 diff
(98.4 %id)
TI_1948079069   .a 150 to 1128 126 to 1094       969/1374
(70 %)
37 diff
(97.4 %id)
TI_1948079408   .a 150 to 987 131 to 963       833/1140
(73 %)
26 diff
(97.8 %id)
TI_1948079409   .a 150 to 1234 127 to 1206   tiling clone,   1080/1434
(75 %)
65 diff
(95.5 %id)
TI_1948079757   .a 150 to 988 132 to 973       842/1164
(72 %)
52 diff
(95.6 %id)
TI_1948079758   .a 150 to 1068 132 to 1045   tiling clone,   914/1405
(65 %)
16 diff
(98.9 %id)
TI_1948080114   .a 150 to 1250 127 to 1219   tiling clone,   1093/1444
(75 %)
58 diff
(96.0 %id)
BG219185   .a 151 to 988 1 to 827       827/864
(95 %)
13 diff
(98.5 %id)
BQ054189 blood, natural killer cells, cell line .a 155 to 1164 1 to 1021   tiling clone,   1021/1024
(99 %)
29 diff
(97.2 %id)
CD621484   .a 168 to 805 647 to 12       636/647
(98 %)
0 diff
(100 %id)
CD621486   .a 179 to 800 637 to 17       621/637
(97 %)
1 diff
(99.9 %id)
BQ669594 epidermoid carcinoma, cell line, salivary gland .a 180 to 1099 19 to 947       929/956
(97 %)
35 diff
(96.4 %id)
BQ671546 epidermoid carcinoma, cell line, salivary gland .a 180 to 1078 23 to 927   tiling clone,   905/927
(97 %)
18 diff
(98.1 %id)
BU528760 epidermoid carcinoma, cell line, lung .a 219 to 1141 1 to 926   tiling clone,   926/929
(99 %)
9 diff
(99.1 %id)
F07668 brain, total brain .a 230 to 558 1 to 329       329/329
(100 %)
2 diff
(99.4 %id)
TI_154186109   .a 236 to 993 121 to 872   tiling clone,   752/943
(79 %)
11 diff
(98.9 %id)
BM790051 stomach .a 306 to 840 1 to 535       535/535
(100 %)
0 diff
(100 %id)
BM795451 stomach .a 306 to 849 1 to 544       544/544
(100 %)
0 diff
(100 %id)
BF353425 head_neck .a 320 to 721 412 to 12       401/412
(97 %)
1 diff
(99.8 %id)
F03923 brain, total brain .a 1275 to 1567 293 to 1   tiling clone,   293/293
(100 %)
0 diff
(100 %id)
DA141738 alzheimer cortex .b 1 to 558 2 to 558   tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
DA143844 amygdala .b 87 to 640 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CB153748 brain .b 88 to 692 1 to 605       605/605
(100 %)
0 diff
(100 %id)
TI_44169978   .b 107 to 885 116 to 889       774/889
(87 %)
21 diff
(97.7 %id)
TI_44165792   .b 111 to 924 87 to 908       822/1047
(78 %)
26 diff
(97.6 %id)
TI_44169810   .b 111 to 955 82 to 926       845/926
(91 %)
20 diff
(97.9 %id)
TI_44000857   .b 111 to 912 81 to 883       803/888
(90 %)
12 diff
(98.7 %id)
TI_45213647   .b 111 to 946 88 to 928       841/931
(90 %)
14 diff
(98.5 %id)
TI_44342913   .b 111 to 1021 90 to 992       903/1019
(88 %)
46 diff
(95.5 %id)
TI_44343633   .b 111 to 915 80 to 896       817/896
(91 %)
29 diff
(96.8 %id)
BI666890 brain, hypothalamus .b 112 to 1021 1 to 903       903/930
(97 %)
44 diff
(95.3 %id)
CF141351 CNCAP(3)T-225 cell line, Prostate .b 113 to 597 1 to 485       485/485
(100 %)
5 diff
(99.0 %id)
BP252724 Kidney .b 114 to 694 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP347445 brain .b 114 to 695 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AK054731 cerebellum .b 116 to 2161 1 to 2046 exact tiling clone, available from FLJ,   2046/2046
(100 %)
0 diff
(100 %id)
BP201551 amygdala .b 116 to 696 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP209462 cerebellum .b 116 to 697 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP210448 cerebellum .b 116 to 700 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BP225435   .b 116 to 697 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB465077.
matches multiple genes
hippocampus .b 116 to 555 1 to 440     also hits gene STK16 440/440
(100 %)
0 diff
(100 %id)
DB467264 hippocampus .b 116 to 572 1 to 455       455/455
(100 %)
2 diff
(99.6 %id)
DB480879 hippocampus .b 116 to 622 1 to 507       507/508
(99 %)
1 diff
(99.9 %id)
DB480978 hippocampus .b 116 to 601 1 to 492       492/492
(100 %)
8 diff
(98.4 %id)
DB481249 hippocampus .b 116 to 552 1 to 437       437/437
(100 %)
0 diff
(100 %id)
DB482493.
matches multiple genes
hippocampus .b 116 to 619 1 to 504     also hits gene STK16 504/504
(100 %)
0 diff
(100 %id)
DB497330 hypothalamus .b 116 to 615 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DB500713 hypothalamus .b 116 to 581 1 to 466       466/466
(100 %)
0 diff
(100 %id)
DB505716 hypothalamus .b 116 to 626 1 to 515       515/515
(100 %)
5 diff
(99.1 %id)
DB506197.
matches multiple genes
hypothalamus .b 116 to 586 1 to 471     also hits gene STK16 471/471
(100 %)
0 diff
(100 %id)
BP254458 Kidney .b 116 to 698 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_44165707   .b 116 to 959 117 to 962       846/962
(87 %)
21 diff
(97.9 %id)
NM_006000.1   .b 116 to 1593 1 to 1478 exact RefSeq, AAA   1478/1478
(100 %)
0 diff
(100 %id)
BP340213 Spleen .b 116 to 696 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP366721 thymus .b 116 to 695 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA054942 cerebellum .b 117 to 674 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA055268 cerebellum .b 117 to 673 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA069356 cerebellum .b 117 to 673 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA085846 cerebellum .b 117 to 577 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA144046 amygdala .b 117 to 681 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA160907 amygdala .b 117 to 682 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA167757 amygdala .b 117 to 654 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA173106 amygdala .b 117 to 685 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA182661 amygdala .b 117 to 682 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA203697 brain .b 117 to 430 2 to 315   capped   314/314
(100 %)
0 diff
(100 %id)
DA258770 caudate nucleus .b 117 to 672 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA286518 corpus callosum .b 117 to 673 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA292561 hippocampus .b 117 to 687 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA344172 substantia nigra .b 117 to 563 8 to 454   capped   447/447
(100 %)
0 diff
(100 %id)
DA364201 subthalamic nucleus .b 117 to 681 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA447818 tongue, tumor tissue .b 117 to 674 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA896806 skeletal muscle .b 117 to 663 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA969384 stomach .b 117 to 683 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB166692 kidney, tumor tissue .b 117 to 672 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB176182 kidney, tumor tissue .b 117 to 678 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB177162 kidney, tumor tissue .b 117 to 671 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA262012 caudate nucleus .b 119 to 681 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
TI_154172076   .b 120 to 719 80 to 679       600/600
(100 %)
5 diff
(99.2 %id)
BP193142 brain .b 121 to 702 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA893102 skeletal muscle .b 121 to 681 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BE018124 cervical carcinoma cell line, cervix .b 123 to 571 1 to 449       449/449
(100 %)
0 diff
(100 %id)
BI115583 lung, small cell carcinoma .b 123 to 1093 1 to 965       965/965
(100 %)
53 diff
(94.6 %id)
BP308664 brain .b 123 to 704 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA078987 cerebellum .b 124 to 694 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA143059 alzheimer cortex .b 124 to 680 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA175316 amygdala .b 124 to 687 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CN368098 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 124 to 769 1 to 646       646/646
(100 %)
0 diff
(100 %id)
AW246904 lung, small cell carcinoma .b 124 to 581 10 to 475       466/475
(98 %)
9 diff
(98.2 %id)
TI_57164822   .b 124 to 971 35 to 890       856/899
(95 %)
28 diff
(96.9 %id)
BQ721951 sympathetic trunk .b 125 to 978 1 to 863       863/875
(98 %)
12 diff
(98.7 %id)
DB504219 hypothalamus .b 126 to 613 1 to 488       488/488
(100 %)
0 diff
(100 %id)
BM478094 lymph, lymphoma, cell line .b 126 to 1143 1 to 1017       1017/1017
(100 %)
43 diff
(95.8 %id)
BQ929457 epidermoid carcinoma, cell line, lung .b 126 to 1050 1 to 930       930/933
(99 %)
9 diff
(99.1 %id)
TI_45209019   .b 126 to 637 92 to 603       512/603
(84 %)
6 diff
(99.1 %id)
CR620681 adult brain .b 128 to 1559 1 to 1432 exact     1432/1432
(100 %)
0 diff
(100 %id)
AL532571 adult brain, brain .b 128 to 980 1 to 848   fully sequenced,   848/848
(100 %)
2 diff
(99.8 %id)
BX428147 adult brain, brain .b 128 to 1035 1 to 898   fully sequenced,   898/898
(100 %)
1 diff
(99.9 %id)
BG030853 breast, mammary adenocarcinoma, cell line .b 130 to 920 1 to 784       784/1094
(71 %)
23 diff
(97.9 %id)
BG677642 skin, squamous cell carcinoma .b 131 to 798 1 to 666       666/666
(100 %)
4 diff
(99.4 %id)
BG681081 skin, squamous cell carcinoma .b 131 to 984 1 to 849       849/849
(100 %)
12 diff
(98.6 %id)
BM461649 eye, retinoblastoma .b 131 to 1004 1 to 879       879/1086
(80 %)
16 diff
(98.6 %id)
CD621487   .b 132 to 831 704 to 12       697/704
(99 %)
8 diff
(98.9 %id)
CR626582 placenta .b 132 to 1591 1 to 1460 exact     1460/1460
(100 %)
0 diff
(100 %id)
BX458330 placenta .b 132 to 1049 1 to 918       918/918
(100 %)
1 diff
(99.9 %id)
BX464808 placenta .b 132 to 1186 1 to 1033       1033/1049
(98 %)
32 diff
(97.0 %id)
BG744259 blood, natural killer cells, cell line .b 132 to 799 1 to 667   fully sequenced,   667/667
(100 %)
6 diff
(99.2 %id)
BG744216 blood, natural killer cells, cell line .b 132 to 824 1 to 690   fully sequenced,   690/690
(100 %)
4 diff
(99.5 %id)
BM046011 carcinoma, cell line, Prostate .b 132 to 1045 1 to 904       904/909
(99 %)
59 diff
(93.6 %id)
BF797239 lymph, lymphoma, cell line .b 133 to 914 1 to 782       782/1024
(76 %)
22 diff
(97.9 %id)
BQ051674 blood, natural killer cells, cell line .b 133 to 1105 1 to 982       982/1016
(96 %)
29 diff
(97.2 %id)
TI_59387761   .b 133 to 976 105 to 946       842/843
(99 %)
16 diff
(98.2 %id)
TI_59389039   .b 133 to 824 111 to 800       690/800
(86 %)
11 diff
(98.7 %id)
BQ052809 blood, natural killer cells, cell line .b 134 to 1018 1 to 890       890/1041
(85 %)
14 diff
(98.7 %id)
BQ687478 ductal carcinoma, cell line, Pancreas .b 134 to 978 1 to 851       851/885
(96 %)
14 diff
(98.5 %id)
BQ685397 ductal carcinoma, cell line, Pancreas .b 134 to 965 1 to 842       842/870
(96 %)
19 diff
(97.9 %id)
BQ687054 ductal carcinoma, cell line, Pancreas .b 134 to 1089 1 to 969       969/972
(99 %)
28 diff
(97.2 %id)
BQ920172 carcinoma, cell line, Prostate .b 134 to 1044 1 to 918       918/954
(96 %)
19 diff
(98.1 %id)
BQ958169 carcinoma, cell line, Prostate .b 134 to 1022 1 to 899       899/941
(95 %)
21 diff
(97.8 %id)
BU541998 carcinoma, cell line, Prostate .b 134 to 1012 1 to 879       879/879
(100 %)
2 diff
(99.8 %id)
TI_57164816   .b 134 to 886 29 to 779       751/780
(96 %)
16 diff
(98.0 %id)
DA201114 brain .b 136 to 726 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
BI836113 pooled pancreas and spleen .b 136 to 977 1 to 842       842/843
(99 %)
11 diff
(98.7 %id)
BQ062846 lymph, lymphoma, cell line .b 136 to 1038 33 to 944       912/1084
(84 %)
25 diff
(97.7 %id)
TI_57164954   .b 136 to 977 34 to 875       842/876
(96 %)
17 diff
(98.1 %id)
CR609291 adult brain .b 137 to 1561 1 to 1425 exact     1425/1425
(100 %)
0 diff
(100 %id)
AL533290 adult brain, brain .b 137 to 579 1 to 437   fully sequenced,   437/437
(100 %)
1 diff
(99.8 %id)
BM468838 embryonal carcinoma, cell line, testis .b 137 to 1128 1 to 994       994/994
(100 %)
13 diff
(98.7 %id)
CD251074 brain, Pituitary .b 137 to 1006 19 to 887       869/887
(97 %)
6 diff
(99.4 %id)
BM801065 leiomyosarcoma, uterus .b 139 to 1024 16 to 901       886/1034
(85 %)
21 diff
(98.0 %id)
BQ438972 embryonal carcinoma, cell line, testis .b 140 to 1049 1 to 914       914/915
(99 %)
15 diff
(98.4 %id)
BQ054375 blood, natural killer cells, cell line .b 141 to 1138 1 to 1016       1016/1021
(99 %)
33 diff
(96.8 %id)
DA060420 cerebellum .b 142 to 688 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
BM018450 astrocytoma grade IV, cell line, brain .b 142 to 824 1 to 682       682/682
(100 %)
5 diff
(99.3 %id)
BQ690981 ductal carcinoma, cell line, Pancreas .b 142 to 1020 1 to 882       882/883
(99 %)
11 diff
(98.8 %id)
BQ642783 lymph, lymphoma, cell line .b 142 to 1014 1 to 885       885/956
(92 %)
33 diff
(96.6 %id)
BU943488 carcinoma, cell line, Prostate .b 142 to 1022 1 to 883       883/937
(94 %)
19 diff
(98.0 %id)
BC009238 Lung, small cell carcinoma .b 143 to 1593 1 to 1451 exact available from MGC, AAA   1451/1451
(100 %)
0 diff
(100 %id)
DA062230 cerebellum .b 143 to 715 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BE250837 eye, retinoblastoma .b 143 to 715 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BE795269 lung, small cell carcinoma .b 143 to 821 1 to 677       677/679
(99 %)
3 diff
(99.6 %id)
BM543121 embryonal carcinoma, cell line, testis .b 143 to 1228 1 to 1097       1097/1097
(100 %)
37 diff
(96.7 %id)
BU163107 ductal carcinoma, cell line, Pancreas .b 143 to 978 1 to 847       847/912
(92 %)
14 diff
(98.5 %id)
BU190973 ductal carcinoma, cell line, Pancreas .b 143 to 959 1 to 830       830/898
(92 %)
13 diff
(98.6 %id)
BM045355 carcinoma, cell line, Prostate .b 144 to 1057 1 to 910       910/910
(100 %)
16 diff
(98.3 %id)
CB156372 brain .b 146 to 811 1 to 666       666/666
(100 %)
0 diff
(100 %id)
BQ050432 leiomyosarcoma, uterus .b 146 to 1095 1 to 963       963/972
(99 %)
29 diff
(97.1 %id)
CB106763 Liver .b 146 to 634 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BM785706 Ascites, stomach .b 146 to 701 1 to 556       556/556
(100 %)
0 diff
(100 %id)
BP348000 brain .b 146 to 728 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA084172 cerebellum .b 147 to 569 2 to 424   capped   423/423
(100 %)
0 diff
(100 %id)
BG749210 eye, normal pigmented retinal epithelium .b 147 to 1014 1 to 872       872/1116
(78 %)
38 diff
(96.6 %id)
F05179 brain, total brain .b 148 to 427 1 to 280       280/280
(100 %)
0 diff
(100 %id)
BM479503 embryonal carcinoma, cell line, testis .b 150 to 1128 1 to 986       986/1051
(93 %)
34 diff
(96.8 %id)
BQ059598 lymph, lymphoma, cell line .b 152 to 1038 1 to 901       901/999
(90 %)
29 diff
(97.1 %id)
BQ061051 lymph, lymphoma, cell line .b 152 to 1122 1 to 986       986/1029
(95 %)
26 diff
(97.5 %id)
DA369290 subthalamic nucleus .b 153 to 717 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BE618372 eye, retinoblastoma .b 153 to 923 1 to 770       770/914
(84 %)
27 diff
(97.1 %id)
BQ688877 ductal carcinoma, cell line, Pancreas .b 157 to 1077 1 to 922       922/922
(100 %)
10 diff
(99.0 %id)
BE267536 Burkitt lymphoma, lymph .b 158 to 837 1 to 677       677/706
(95 %)
4 diff
(99.5 %id)
BM561700 blood, natural killer cells, cell line .b 158 to 1185 1 to 1031       1031/1033
(99 %)
39 diff
(96.3 %id)
TI_154138988   .b 159 to 937 80 to 861       782/782
(100 %)
30 diff
(96.2 %id)
BE792367 lung, small cell carcinoma .b 169 to 904 1 to 734       734/735
(99 %)
5 diff
(99.4 %id)
TI_1948079760   .b 545 to 1519 1083 to 126       958/1128
(84 %)
0 diff
(100 %id)
AL565074 adult brain, brain .b 548 to 1561 1015 to 1   fully sequenced,   1015/1015
(100 %)
2 diff
(99.9 %id)
TI_1948079410   .b 548 to 1519 1101 to 128       974/1287
(75 %)
0 diff
(100 %id)
TI_1948079759   .b 548 to 1519 1098 to 128       971/1292
(75 %)
0 diff
(100 %id)
TI_154193908   .b 548 to 1409 60 to 905       846/917
(92 %)
6 diff
(99.4 %id)
TI_1948079070   .b 551 to 1519 1098 to 128       971/1305
(74 %)
0 diff
(100 %id)
TI_1948079071   .b 551 to 1519 1086 to 126       961/1136
(84 %)
0 diff
(100 %id)
AL569576 placenta .b 554 to 1456 1021 to 118       904/1025
(88 %)
0 diff
(100 %id)
BQ671164 epidermoid carcinoma, cell line, salivary gland .b 564 to 1413 1 to 854       854/946
(90 %)
6 diff
(99.4 %id)
H25245 breast .b 583 to 759 1 to 177       177/177
(100 %)
0 diff
(100 %id)
TI_1948079411   .b 596 to 1519 1038 to 126       913/1136
(80 %)
0 diff
(100 %id)
BX464807 placenta .b 613 to 1566 951 to 1       951/1001
(95 %)
13 diff
(98.8 %id)
TI_1948080116   .b 618 to 1519 1032 to 125       908/1148
(79 %)
0 diff
(100 %id)
BG758168 B-cells, primary B-cells from tonsils (cell line) .b 640 to 1505 1 to 873       873/966
(90 %)
16 diff
(98.4 %id)
BQ271164 Pancreas, Purified pancreatic islet .b 641 to 788 148 to 1       148/153
(96 %)
4 diff
(97.4 %id)
AA641032 invasive tumor (cell line), Prostate .b 668 to 1587 913 to 1       913/913
(100 %)
20 diff
(97.9 %id)
AA180912 muscle, skeletal muscle .b 714 to 1097 1 to 385   fully sequenced,   385/385
(100 %)
2 diff
(99.5 %id)
TI_149293775   .b 729 to 1591 949 to 96       854/1065
(80 %)
0 diff
(100 %id)
BG744989 blood, natural killer cells, cell line .b 769 to 1539 764 to 1   fully sequenced,   764/764
(100 %)
5 diff
(99.4 %id)
TI_154031037   .b 773 to 1591 873 to 75       799/1014
(78 %)
0 diff
(100 %id)
BE618858 eye, retinoblastoma .b 786 to 1570 796 to 10       787/799
(98 %)
0 diff
(100 %id)
CB153518 brain .b 791 to 1276 1 to 486       486/486
(100 %)
0 diff
(100 %id)
BG744953 blood, natural killer cells, cell line .b 794 to 1545 765 to 1   fully sequenced,   765/765
(100 %)
6 diff
(99.3 %id)
AA858420 colon, colon tumor .b 828 to 1586 765 to 1       765/778
(98 %)
9 diff
(98.9 %id)
BE963407 eye, retinoblastoma .b 837 to 1587 765 to 17   AAA   749/795
(94 %)
23 diff
(97.2 %id)
TI_154141903   .b 837 to 1537 79 to 776       698/718
(97 %)
29 diff
(96.0 %id)
BC018854 Ovary, adenocarcinoma .b 864 to 1593 1 to 730   available from MGC, AAA   730/730
(100 %)
0 diff
(100 %id)
BQ638436 eye, retina .b 892 to 1501 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BQ001410 Fibrosarcoma .b 913 to 1587 692 to 19   AAA   674/674
(100 %)
1 diff
(99.9 %id)
BU682795 lung .b 914 to 1591 696 to 19   AAA   678/678
(100 %)
2 diff
(99.8 %id)
CA419818 Bone, Human Chondrosarcoma Cell Line .b 927 to 1593 685 to 19   AAA   667/667
(100 %)
3 diff
(99.6 %id)
CA419611 Bone, Human Chondrosarcoma Cell Line .b 928 to 1591 681 to 19   AAA   663/663
(100 %)
1 diff
(99.9 %id)
AL532749 adult brain, brain .b 950 to 1556 601 to 1   fully sequenced,   601/601
(100 %)
5 diff
(99.2 %id)
CA442729 Fibrosarcoma .b 986 to 1591 624 to 19   AAA   606/606
(100 %)
0 diff
(100 %id)
CA412583 Chondrosarcoma Grade II, Left Pelvis .b 988 to 1587 618 to 19   AAA   600/600
(100 %)
0 diff
(100 %id)
BX428146 adult brain, brain .b 1005 to 1559 554 to 1   fully sequenced,   554/554
(100 %)
1 diff
(99.9 %id)
BE301609 cervical carcinoma cell line, cervix .b 1023 to 1588 569 to 4       566/569
(99 %)
0 diff
(100 %id)
BM697392 eye, lens .b 1029 to 1587 1 to 559   fully sequenced,   559/559
(100 %)
1 diff
(99.9 %id)
TI_151738371   .b 1034 to 1593 699 to 137   AAA   563/1092
(51 %)
23 diff
(97.9 %id)
AA180742 muscle, skeletal muscle .b 1082 to 1593 530 to 15   fully sequenced, AAA   516/516
(100 %)
9 diff
(98.3 %id)
DB549688 hippocampus .b 1086 to 1533 1 to 448     Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
AW467207 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .b 1086 to 1587 502 to 1       502/502
(100 %)
0 diff
(100 %id)
DB577003 hypothalamus .b 1104 to 1587 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
DB550065 hippocampus .b 1107 to 1587 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
DB549788 hippocampus .b 1116 to 1587 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
DB575466 hypothalamus .b 1116 to 1587 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
BF963426 nervous_normal .b 1128 to 1317 15 to 200       186/200
(93 %)
6 diff
(97.0 %id)
BI034650 nervous_normal .b 1128 to 1317 15 to 200       186/200
(93 %)
6 diff
(97.0 %id)
DB568398 hypothalamus .b 1128 to 1590 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
DB547437 hippocampus .b 1129 to 1587 1 to 459     Submitted on the opposite strand 459/459
(100 %)
2 diff
(99.6 %id)
DB568427 hypothalamus .b 1129 to 1587 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
DB534251 hippocampus .b 1175 to 1587 1 to 413     Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
AW250761 lung, small cell carcinoma .b 1175 to 1593 429 to 11   AAA   419/419
(100 %)
1 diff
(99.8 %id)
BX434021 placenta .b 1186 to 1591 405 to 1       405/500
(81 %)
17 diff
(96.6 %id)
F28987 pectoral muscle (after mastectomy) .b 1195 to 1590 1 to 396       396/396
(100 %)
0 diff
(100 %id)
F24512 pectoral muscle (after mastectomy) .b 1209 to 1352 1 to 144       144/144
(100 %)
0 diff
(100 %id)
BM724739 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1218 to 1587 1 to 370   fully sequenced, AAA   370/370
(100 %)
0 diff
(100 %id)
F25814 pectoral muscle (after mastectomy) .b 1238 to 1398 1 to 161       161/161
(100 %)
0 diff
(100 %id)
F29341 pectoral muscle (after mastectomy) .b 1243 to 1491 1 to 249       249/249
(100 %)
0 diff
(100 %id)
H25224 breast .b 1274 to 1475 202 to 1       202/202
(100 %)
2 diff
(99.1 %id)
BM993997 lung, Metastatic Chondrosarcoma .b 1330 to 1587 276 to 19   AAA   258/258
(100 %)
0 diff
(100 %id)
F01429 brain, total brain .b 1344 to 1587 264 to 21   AAA   244/244
(100 %)
0 diff
(100 %id)
BU502441 mixed (pool of 40 RNAs) .b 1393 to 1590 1 to 198   AAA   198/198
(100 %)
0 diff
(100 %id)
GD160924   .b 1409 to 1587 1 to 178   AAA   178/178
(100 %)
4 diff
(97.8 %id)
BG389535 embryonal carcinoma, cell line, testis .b 1419 to 1587 1 to 169   AAA   169/169
(100 %)
0 diff
(100 %id)
BU741391 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1465 to 1587 141 to 19   fully sequenced, AAA   123/123
(100 %)
0 diff
(100 %id)
BM668166 eye, lens .b 1492 to 1587 114 to 19   fully sequenced, AAA   96/96
(100 %)
0 diff
(100 %id)
AI906773 breast .b 1511 to 1566 1 to 56       56/56
(100 %)
0 diff
(100 %id)
AI906772 breast .b 1579 to 1641 1 to 62       62/62
(100 %)
1 diff
(98.4 %id)
DB296495 cerebellum .b 1617 to 2161 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
CU444292 epidermis .b 1651 to 2343 12 to 704   tiling clone,   693/705
(98 %)
4 diff
(99.5 %id)
CU455511 epidermis .b 1651 to 2345 12 to 706       695/706
(98 %)
6 diff
(99.2 %id)
CU454148 epidermis .b 1654 to 2354 15 to 715   tiling clone,   701/715
(98 %)
6 diff
(99.2 %id)
BX095945 whole brain .b 1668 to 2161 508 to 15   AAA   494/494
(100 %)
0 diff
(100 %id)
AI811117 ovary, tumor, 5 pooled (see description) .b 1741 to 2160 420 to 1       420/420
(100 %)
0 diff
(100 %id)
F19414 pectoral muscle (after mastectomy) .b 1794 to 2095 1 to 302       302/302
(100 %)
0 diff
(100 %id)
DC378787   .c 1 to 471 1 to 471   tiling clone,   471/476
(98 %)
2 diff
(99.6 %id)
DC337643 substantia nigra .c 285 to 839 1 to 557       557/557
(100 %)
3 diff
(99.5 %id)
DC395249 testis .c 286 to 799 1 to 515       515/515
(100 %)
2 diff
(99.7 %id)
DC399843 testis .c 286 to 647 1 to 362       362/362
(100 %)
1 diff
(99.8 %id)
AK299958 ovary, tumor tissue .c 418 to 2342 1 to 1925   tiling clone,   1925/1925
(100 %)
0 diff
(100 %id)
DC424520 ovary, tumor tissue .c 418 to 1020 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
DC336358 substantia nigra .c 461 to 931 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
DC394738 testis .c 461 to 816 1 to 356       356/356
(100 %)
0 diff
(100 %id)
DC395276 testis .c 461 to 1013 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DC395351 testis .c 461 to 1015 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC396235 testis .c 461 to 922 1 to 462       462/462
(100 %)
2 diff
(99.6 %id)
DC396421 testis .c 461 to 1016 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC396918 testis .c 461 to 1031 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC397062 testis .c 461 to 1033 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC397642 testis .c 461 to 1034 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC397706 testis .c 461 to 1014 1 to 555       555/555
(100 %)
7 diff
(98.8 %id)
DC397755 testis .c 461 to 1031 1 to 574       574/574
(100 %)
5 diff
(99.2 %id)
DC397856 testis .c 461 to 1008 1 to 550       550/550
(100 %)
2 diff
(99.7 %id)
DC397916 testis .c 461 to 1023 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC397990 testis .c 461 to 1017 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC398713 testis .c 461 to 1036 1 to 579       579/579
(100 %)
3 diff
(99.5 %id)
DC398871 testis .c 461 to 1033 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC399538 testis .c 461 to 922 1 to 462       462/462
(100 %)
0 diff
(100 %id)
DB045874 testis .c 462 to 1000 2 to 544   capped   543/543
(100 %)
5 diff
(99.1 %id)
CB153930 brain .c 463 to 1089 1 to 627       627/627
(100 %)
0 diff
(100 %id)
CD243343 testis .c 478 to 1309 1 to 839       839/883
(95 %)
15 diff
(98.4 %id)
BE741651 adenocarcinoma cell line, ovary .c 662 to 1549 1 to 894       894/912
(98 %)
32 diff
(96.5 %id)
DC339240 subthalamic nucleus .c 766 to 1331 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
BT006731   .c 932 to 2274 4 to 1346       1346/1347
(99 %)
1 diff
(100.0 %id)
CD621494   .c 932 to 1507 580 to 7       579/585
(98 %)
0 diff
(100 %id)
TI_154185741   .c 932 to 1689 117 to 863       752/944
(79 %)
17 diff
(98.2 %id)
TI_1948080115   .c 1102 to 2274 1276 to 130       990/1278
(77 %)
2 diff
(99.9 %id)
BQ051971 blood, natural killer cells, cell line .c 1171 to 2061 1 to 905       905/1052
(86 %)
25 diff
(97.7 %id)
CU443356 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
9 diff
(97.2 %id)
CU443618 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
7 diff
(96.4 %id)
CU443885 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
9 diff
(95.4 %id)
CU444841 epidermis .c 1200 to 1511 1 to 313       313/323
(96 %)
7 diff
(97.9 %id)
CU447942 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
10 diff
(96.9 %id)
CU450253 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
7 diff
(96.4 %id)
CU451498 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
9 diff
(97.2 %id)
CU452895 epidermis .c 1200 to 1385 1 to 187       187/205
(91 %)
7 diff
(96.6 %id)
CU453157 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
7 diff
(96.4 %id)
CU453305 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
7 diff
(96.4 %id)
CU454129 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
9 diff
(97.2 %id)
CU455483 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
9 diff
(97.2 %id)
CU455628 epidermis .c 1200 to 1509 1 to 311       311/314
(99 %)
9 diff
(97.2 %id)
CU456150 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
8 diff
(95.9 %id)
CU457008 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
8 diff
(95.9 %id)
CU457374 epidermis .c 1200 to 1385 1 to 187       187/194
(96 %)
7 diff
(96.4 %id)
BE696283 colon .c 1204 to 1666 471 to 6       466/471
(98 %)
0 diff
(100 %id)
CU445653 epidermis .c 1204 to 1509 310 to 4     Submitted on the opposite strand 307/314
(97 %)
1 diff
(99.7 %id)
CU445767 epidermis .c 1204 to 1572 376 to 7     Submitted on the opposite strand 370/380
(97 %)
1 diff
(99.8 %id)
CU446350 epidermis .c 1204 to 1385 201 to 19     Submitted on the opposite strand 183/205
(89 %)
1 diff
(99.6 %id)
CU448911 epidermis .c 1204 to 1504 321 to 20     Submitted on the opposite strand 302/325
(92 %)
1 diff
(99.7 %id)
CU449754 epidermis .c 1204 to 1385 190 to 8     Submitted on the opposite strand 183/194
(94 %)
1 diff
(99.5 %id)
CU450543 epidermis .c 1204 to 1572 376 to 7     Submitted on the opposite strand 370/380
(97 %)
1 diff
(99.8 %id)
CU451353 epidermis .c 1204 to 1740 539 to 2     Submitted on the opposite strand 538/543
(99 %)
2 diff
(99.7 %id)
CU452687 epidermis .c 1204 to 1385 190 to 8     Submitted on the opposite strand 183/194
(94 %)
2 diff
(99.0 %id)
CU453540 epidermis .c 1204 to 1385 190 to 8     Submitted on the opposite strand 183/194
(94 %)
1 diff
(99.5 %id)
CU453688 epidermis .c 1204 to 1509 310 to 4     Submitted on the opposite strand 307/314
(97 %)
1 diff
(99.7 %id)
CU454641 epidermis .c 1204 to 1504 321 to 20     Submitted on the opposite strand 302/325
(92 %)
1 diff
(99.7 %id)
CU454674 epidermis .c 1204 to 1385 190 to 8     Submitted on the opposite strand 183/194
(94 %)
1 diff
(99.5 %id)
CU455120 epidermis .c 1204 to 1385 190 to 8     Submitted on the opposite strand 183/194
(94 %)
1 diff
(99.5 %id)
BG697371 skin .c 1211 to 2095 1 to 884       884/884
(100 %)
13 diff
(98.6 %id)
AW794875 uterus .c 1259 to 1707 456 to 8       449/456
(98 %)
0 diff
(100 %id)
BG679770 skin, squamous cell carcinoma .c 1272 to 2160 1 to 893       893/895
(99 %)
23 diff
(97.5 %id)
CF128082 Chondrosarcoma Lung Metastasis cell lines, lung .c 1294 to 2001 1 to 707       707/707
(100 %)
1 diff
(99.9 %id)
DC427313 ovary, tumor tissue .c 2014 to 2342 329 to 1       329/338
(97 %)
2 diff
(99.5 %id)
DA060678 cerebellum .d 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA065977 cerebellum .d 1 to 557 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP202135 amygdala .d 2 to 583 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AL533321 adult brain, brain .d 14 to 754 1 to 741   tiling clone,   741/741
(100 %)
0 diff
(100 %id)
BE940391 uterus_tumor .d 665 to 878 24 to 237   tiling clone,   214/237
(90 %)
6 diff
(97.5 %id)
BQ316810 colon .d 749 to 1233 53 to 540   tiling clone,   488/540
(90 %)
6 diff
(98.9 %id)
BQ362403 stomach .d 932 to 1258 1 to 330       330/337
(97 %)
13 diff
(96.2 %id)
AL533276 adult brain, brain .d 1186 to 1977 793 to 1   tiling clone,   793/793
(100 %)
2 diff
(99.8 %id)
CR983729 T-Lymphocytes .e 1 to 785 11 to 798 S225V V226G A227G E228R I229D ... tiling clone,   790/799
(98 %)
9 diff
(98.9 %id)
BE742772 adenocarcinoma cell line, ovary .e 9 to 758 1 to 736   tiling clone,   736/938
(78 %)
22 diff
(97.7 %id)
DA316655 hippocampus .f 1 to 532 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA335989 hippocampus .f 1 to 575 2 to 577   tiling clone, capped   576/576
(100 %)
3 diff
(99.5 %id)
DA219210 brain .f 6 to 572 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
DB160066 thymus .f 6 to 573 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB160379 thymus .f 6 to 588 2 to 583   tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
DB134390 thymus .f 15 to 270 2 to 257   capped   256/256
(100 %)
1 diff
(99.7 %id)
DA412201 thalamus .f 21 to 585 2 to 566   tiling clone, capped   565/565
(100 %)
3 diff
(99.5 %id)
DA205692 brain .f 568 to 1144 2 to 579   tiling clone, capped   578/578
(100 %)
2 diff
(99.7 %id)
AL701324 human skeletal muscle .f 606 to 1038 1 to 433       433/433
(100 %)
2 diff
(99.6 %id)
BP255029 Kidney .f 631 to 1214 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
CB108042 Liver .f 659 to 1053 1 to 396       396/396
(100 %)
1 diff
(99.8 %id)
BQ688556 ductal carcinoma, cell line, Pancreas .f 671 to 1470 1 to 813   tiling clone,   813/891
(91 %)
16 diff
(98.3 %id)
BQ688607 ductal carcinoma, cell line, Pancreas .f 685 to 1530 1 to 856   tiling clone,   856/916
(93 %)
16 diff
(98.3 %id)
BI225688 Burkitt lymphoma, lymph .g 1 to 525 1 to 525       525/525
(100 %)
3 diff
(99.5 %id)
BI226289 Burkitt lymphoma, lymph .g 1 to 399 1 to 404   tiling clone,   404/642
(62 %)
11 diff
(98.3 %id)
BE270043 Burkitt lymphoma, lymph .g 21 to 727 1 to 703       703/721
(97 %)
17 diff
(97.7 %id)
BE559519 Burkitt lymphoma, lymph .g 21 to 775 1 to 752       752/757
(99 %)
19 diff
(97.5 %id)
BE560950 Burkitt lymphoma, lymph .g 21 to 803 1 to 778       776/1114
(69 %)
40 diff
(96.5 %id)
BQ061291 lymph, lymphoma, cell line .g 72 to 977 1 to 913 W155L C156V L160F V161G A163G ... tiling clone,   913/978
(93 %)
15 diff
(98.5 %id)
FN059885 breast carcinoma .g 578 to 668 91 to 1     Submitted on the opposite strand 91/92
(98 %)
2 diff
(97.9 %id)
DA951326 Spleen .h 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DA932583 Spleen .h 8 to 568 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
F05784 brain, total brain .h 79 to 340 1 to 261       261/261
(100 %)
1 diff
(99.7 %id)
F08327 brain, total brain .h 82 to 359 1 to 278       278/278
(100 %)
0 diff
(100 %id)
F08361 brain, total brain .h 140 to 337 1 to 198       198/198
(100 %)
0 diff
(100 %id)
BU661977 blood .h 181 to 803 24 to 646   tiling clone,   623/646
(96 %)
7 diff
(99.0 %id)
F04550 brain, total brain .h 1396 to 1718 323 to 1   tiling clone,   323/323
(100 %)
0 diff
(100 %id)
F02031 brain, total brain .h 1484 to 1718 235 to 1       235/235
(100 %)
0 diff
(100 %id)
F04584 brain, total brain .h 1510 to 1718 209 to 1       209/209
(100 %)
0 diff
(100 %id)
DB478769 hippocampus .i 1 to 486 1 to 486   tiling clone,   486/486
(100 %)
1 diff
(99.8 %id)
BM846620 myeloma .i 1 to 521 1 to 520 exact tiling clone,   520/520
(100 %)
1 diff
(99.9 %id)
BM847108 myeloma .i 3 to 529 1 to 526 S148T     526/526
(100 %)
2 diff
(99.7 %id)
F08697 brain, total brain .i 17 to 307 1 to 291       291/291
(100 %)
0 diff
(100 %id)
BM796365 stomach .i 381 to 541 1 to 155   tiling clone,   157/155
(101 %)
13 diff
(91.7 %id)
F04000 brain, total brain .i 1268 to 1468 201 to 1   tiling clone,   201/201
(100 %)
0 diff
(100 %id)
DA898773 skeletal muscle .j 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DB024431 testis .k 1 to 455 2 to 457 R18Q A20G A21C A22R A24G ... tiling clone, capped   456/456
(100 %)
1 diff
(99.8 %id)
CR980279 T-Lymphocytes .l-u 1 to 702 1 to 703 exact tiling clone,   703/703
(100 %)
2 diff
(99.8 %id)
BQ637200 eye, retina .m 1 to 615 1 to 615 exact tiling clone,   615/615
(100 %)
1 diff
(99.9 %id)
DB020476 testis .n 1 to 546 2 to 548 exact tiling clone, capped   547/547
(100 %)
2 diff
(99.7 %id)
BG168358 hypernephroma, cell line, Kidney Gene TUBA4A, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI