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Gene TTC18TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene TTC18 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK098631 testis .a 1 to 1706 1 to 1706 exact tiling clone, available from FLJ,   1706/1706
(100 %)
1 diff
(100.0 %id)
CD244513 testis .a 128 to 913 1 to 794       792/840
(94 %)
18 diff
(97.9 %id)
FN117556 breast carcinoma .a 589 to 658 69 to 1     Submitted on the opposite strand 69/70
(98 %)
1 diff
(98.6 %id)
BF895539 marrow .a 870 to 1208 364 to 24   tiling clone, Submitted on the opposite strand 341/364
(93 %)
1 diff
(99.8 %id)
BF895534 marrow .a 965 to 1208 269 to 26     Submitted on the opposite strand 244/269
(90 %)
1 diff
(99.7 %id)
TI_149305776   .a 1039 to 1706 744 to 79   AAA   666/910
(73 %)
3 diff
(99.7 %id)
BU686075 lung, Primary Lung Epithelial Cells .a 1059 to 1706 665 to 19   tiling clone, AAA   647/647
(100 %)
2 diff
(99.7 %id)
AW024437 Kidney .a 1132 to 1706 577 to 1       577/577
(100 %)
3 diff
(99.5 %id)
AW300070 Kidney .a 1188 to 1690 505 to 3       503/505
(99 %)
0 diff
(100 %id)
TI_1948150161   .b 125 to 1040 1045 to 128 T2Y K3Q Q4R K5Q S6K ... tiling clone,   1075/1210
(88 %)
42 diff
(96.6 %id)
CV401335 nervous_normal .c 1 to 367 29 to 400   tiling clone,   372/400
(93 %)
6 diff
(98.5 %id)
BF942801 nervous_normal .c 22 to 595 598 to 28   tiling clone, Submitted on the opposite strand 571/600
(95 %)
0 diff
(100 %id)
BF942805 nervous_normal .c 49 to 619 569 to 2   tiling clone, Submitted on the opposite strand 568/571
(99 %)
0 diff
(100 %id)
CV401365 nervous_normal .c 76 to 437 1 to 365       365/365
(100 %)
18 diff
(95.1 %id)
CV401333 nervous_normal .c 122 to 624 527 to 26     Submitted on the opposite strand 502/527
(95 %)
0 diff
(100 %id)
CD107987 brain, Pituitary .c 170 to 1023 1 to 859   tiling clone,   859/864
(99 %)
10 diff
(98.9 %id)
CV399792 placenta_normal .c 243 to 486 193 to 436       244/436
(55 %)
6 diff
(98.7 %id)
AF435959   .c 878 to 2198 1 to 1314 L34* tiling clone,   1316/1319
(99 %)
11 diff
(99.2 %id)
TI_1948150162   .c 1067 to 1984 1058 to 137   tiling clone,   922/1275
(72 %)
15 diff
(98.9 %id)
TI_1948150469   .c 1083 to 1984 1037 to 135   tiling clone,   903/1237
(72 %)
16 diff
(98.8 %id)
TI_1948150468   .c 1090 to 1984 1025 to 128       898/1281
(70 %)
31 diff
(97.6 %id)
TI_1948149573   .c 1226 to 1984 888 to 130       759/1232
(61 %)
12 diff
(99.1 %id)
TI_159723759   .c 1229 to 2194 1025 to 80   AAA   946/983
(96 %)
38 diff
(96.2 %id)
TI_159723686   .c 1250 to 2194 1006 to 80   AAA   927/974
(95 %)
27 diff
(97.3 %id)
W25140 lung .c 1410 to 1784 1 to 381   fully sequenced,   381/381
(100 %)
10 diff
(97.4 %id)
BX093691 lung .c 1411 to 2194 1 to 784   AAA   784/784
(100 %)
0 diff
(100 %id)
CB853554 Human Lung Epithelial cells, lung .c 1531 to 2194 682 to 19   AAA   664/664
(100 %)
6 diff
(99.1 %id)
CB853556 Human Lung Epithelial cells, lung .c 1531 to 2194 682 to 19   AAA   664/664
(100 %)
0 diff
(100 %id)
BQ019201 lung, Metastatic Chondrosarcoma .c 1537 to 2194 676 to 19   AAA   658/658
(100 %)
0 diff
(100 %id)
TI_158431263   .c 1538 to 2171 732 to 95   AAA   638/867
(73 %)
8 diff
(99.1 %id)
AL043737 testis .c 1542 to 2166 625 to 1       625/625
(100 %)
0 diff
(100 %id)
TI_149308447   .c 1560 to 2194 723 to 88   AAA   636/975
(65 %)
8 diff
(99.2 %id)
CF528535 placenta .c 1586 to 2171 600 to 15   AAA   586/586
(100 %)
0 diff
(100 %id)
BM979653 lung, Primary Lung Epithelial Cells .c 1595 to 2194 619 to 19   AAA   601/601
(100 %)
7 diff
(98.9 %id)
TI_149298416   .c 1663 to 2194 613 to 82   AAA   532/766
(69 %)
1 diff
(99.9 %id)
AI684461 pooled .c 1675 to 2194 520 to 1       520/520
(100 %)
0 diff
(100 %id)
AA461405   .c 1687 to 1887 1 to 201   fully sequenced,   201/201
(100 %)
0 diff
(100 %id)
BM983163 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1687 to 2194 526 to 19   AAA   508/508
(100 %)
0 diff
(100 %id)
AI187125 lung .c 1713 to 2194 482 to 1       482/482
(100 %)
0 diff
(100 %id)
AI432299 pooled .c 1713 to 2192 481 to 2       480/481
(99 %)
0 diff
(100 %id)
N93317 lung .c 1724 to 2194 472 to 1   fully sequenced,   472/472
(100 %)
1 diff
(99.8 %id)
DB520200 testis .c 1742 to 2192 1 to 451     Submitted on the opposite strand 451/453
(99 %)
1 diff
(99.8 %id)
AW150097 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1742 to 2198 462 to 6       457/462
(98 %)
0 diff
(100 %id)
AI458159 carcinoid, lung .c 1754 to 2201 458 to 12   tiling clone, AAA   447/456
(98 %)
2 diff
(99.6 %id)
AW444635   .c 1754 to 2194 458 to 18   AAA   441/451
(97 %)
1 diff
(99.8 %id)
AW613917 pooled germ cell tumors .c 1754 to 2171 420 to 1       420/430
(97 %)
2 diff
(99.6 %id)
AW241880 pooled .c 1757 to 2179 424 to 1       424/424
(100 %)
5 diff
(98.9 %id)
BX281792 testis .c 1769 to 2194 454 to 29   AAA Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AI283543 pooled .c 1770 to 2197 427 to 1       427/427
(100 %)
1 diff
(99.8 %id)
AW594330 pooled germ cell tumors .c 1770 to 2192 432 to 6       346/432
(80 %)
12 diff
(97.3 %id)
AA678408 liver and spleen .c 1776 to 2189 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
DB512061 testis .c 1781 to 2194 1 to 413     Submitted on the opposite strand 413/413
(100 %)
6 diff
(98.6 %id)
AI027249   .c 1782 to 2188 422 to 16   AAA   407/407
(100 %)
0 diff
(100 %id)
DB508426 testis .c 1785 to 2194 1 to 409   AAA Submitted on the opposite strand 409/409
(100 %)
1 diff
(99.8 %id)
AA449760   .c 1801 to 2194 412 to 21   AAA   392/392
(100 %)
2 diff
(99.5 %id)
AW612223 carcinoid, lung .c 1824 to 2179 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AA461091   .c 1826 to 2194 387 to 21   fully sequenced, AAA   367/367
(100 %)
1 diff
(99.8 %id)
AL039443 testis .c 1828 to 2195 1 to 368   fully sequenced, AAA   368/368
(100 %)
3 diff
(99.2 %id)
AI538905 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1831 to 2200 370 to 1   tiling clone,   370/370
(100 %)
0 diff
(100 %id)
AL039444 testis .c 1866 to 2194 372 to 44   fully sequenced, AAA   329/329
(100 %)
1 diff
(99.7 %id)
AI208344   .c 1868 to 2198 332 to 2       331/332
(99 %)
0 diff
(100 %id)
BG192583   .c 1899 to 2194 1 to 294   AAA   294/295
(99 %)
7 diff
(97.7 %id)
BM422374 testis .c 1899 to 2193 6 to 300       295/314
(93 %)
6 diff
(98.1 %id)
BG196633   .c 1919 to 2194 1 to 276   AAA   276/276
(100 %)
7 diff
(97.5 %id)
C20668   .c 1937 to 2194 1 to 258       258/258
(100 %)
0 diff
(100 %id)
AI808236 pooled .c 1949 to 2191 243 to 1       243/243
(100 %)
2 diff
(99.2 %id)
AF435958   .d 1 to 1231 1 to 1224 L34* tiling clone,   1226/1229
(99 %)
11 diff
(99.2 %id)
BI831350 brain, medulla .d 1 to 826 1 to 824   tiling clone,   826/864
(95 %)
20 diff
(97.7 %id)
TI_57172097   .d 1 to 826 67 to 890       826/930
(88 %)
20 diff
(97.9 %id)
CF456645 peripheral nervous system .e 1 to 749 32 to 780 A63V tiling clone,   749/780
(96 %)
7 diff
(99.2 %id)
AA769128 germinal center B cell .f-u 1 to 509 509 to 1 exact tiling clone,   509/509
(100 %)
0 diff
(100 %id)
FN098294 breast carcinoma .f-u 88 to 195 1 to 108       108/109
(99 %)
2 diff
(98.2 %id)
AA767809 germinal center B cell .f-u 100 to 472 420 to 41 P41L F44Y     380/420
(90 %)
0 diff
(100 %id)
AI204701 heart .f-u 172 to 508 337 to 1 exact     337/337
(100 %)
0 diff
(100 %id)
AK308746.
matches multiple genes
amygdala Gene nakimi, variant not shown         This clone was ignored, also hits gene nakimi, porsmor    
AK308746.
matches multiple genes
amygdala Gene porsmor, variant not shown         This clone was ignored, also hits gene nakimi, porsmor    
AK308746.
matches multiple genes
amygdala Gene TTC18, variant not shown         This clone was ignored, also hits gene nakimi, porsmor    
AL833537.
matches multiple genes
cervix Gene nakimi, variant not shown       available from DKFZ, AAA This clone was ignored, also hits gene nakimi    
AL833537.
matches multiple genes
cervix Gene TTC18, variant not shown       available from DKFZ, AAA This clone was ignored, also hits gene nakimi    
BC032856.
matches multiple genes
testis Gene nakimi, variant not shown       available from MGC, AAA This clone was ignored, also hits gene nakimi    
BC032856.
matches multiple genes
testis Gene TTC18, variant not shown       available from MGC, AAA This clone was ignored, also hits gene nakimi    
NM_145170.3.
matches multiple genes
  Gene nakimi, variant not shown       RefSeq, AAA This clone was ignored, also hits gene nakimi    
NM_145170.3.
matches multiple genes
  Gene TTC18, variant not shown       RefSeq, AAA This clone was ignored, also hits gene nakimi    
AV751223 Pituitary Gene TTC18, variant not shown         This clone was ignored    
TI_1948149863   Gene TTC18, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948149864   Gene TTC18, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C