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Gene TTC16TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
62 supporting clones for gene TTC16 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK057342 testis .a 1 to 2880 5 to 2884 exact tiling clone, available from FLJ,   2884/2884
(100 %)
0 diff
(100 %id)
NM_144965.1   .a 1 to 2880 5 to 2884 exact RefSeq,   2884/2884
(100 %)
0 diff
(100 %id)
DB021495 testis .a 1 to 560 5 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB027073 testis .a 1 to 551 5 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB031468 testis .a 1 to 608 5 to 612   capped   611/611
(100 %)
0 diff
(100 %id)
DB034567 testis .a 1 to 575 5 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB049169 testis .a 1 to 545 5 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB077767 testis .a 1 to 564 5 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB094171 testis .a 1 to 538 5 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DB211045 trachea .a 1 to 531 5 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB048984 testis .a 1 to 539 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB073983 testis .a 1 to 546 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB449678.
matches multiple genes
testis .a 18 to 490 1 to 473     also hits gene TOR2A 473/473
(100 %)
5 diff
(99.0 %id)
DB461276.
matches multiple genes
testis .a 26 to 515 1 to 490     also hits gene TOR2A 490/490
(100 %)
2 diff
(99.6 %id)
DB450787.
matches multiple genes
testis .a 51 to 541 1 to 491     also hits gene TOR2A 491/491
(100 %)
3 diff
(99.4 %id)
TI_1948087514   .a 63 to 936 140 to 1011       872/1370
(63 %)
15 diff
(99.0 %id)
TI_1948087850   .a 63 to 719 151 to 807       657/1403
(46 %)
13 diff
(99.1 %id)
CV024748 mixed .a 64 to 749 1 to 685       685/685
(100 %)
5 diff
(99.3 %id)
BC031281 testis .a 82 to 2802 99 to 2819 M405T E588G A872S available from MGC, AAA   2819/2819
(100 %)
7 diff
(99.8 %id)
DB447141 testis .a 82 to 412 96 to 425       425/425
(100 %)
4 diff
(99.1 %id)
BI560277 testis .a 82 to 667 103 to 688       688/689
(99 %)
8 diff
(98.9 %id)
TI_44348690   .a 82 to 667 221 to 806       683/807
(84 %)
9 diff
(98.9 %id)
DB085638 testis .a 82 to 536 99 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA318193 hippocampus .a 523 to 1085 2 to 564   capped   563/564
(99 %)
1 diff
(99.9 %id)
DA236820 brain .a 590 to 1136 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
TI_1948087515   .a 1827 to 2684 964 to 101       864/1293
(66 %)
16 diff
(98.8 %id)
TI_1948087851   .a 1981 to 2684 841 to 129       713/1381
(51 %)
0 diff
(100 %id)
DB335953 testis .a 2387 to 2880 495 to 1       495/495
(100 %)
3 diff
(99.4 %id)
AK302737 testis .b 1 to 2763 5 to 2767 V310L tiling clone,   2767/2767
(100 %)
2 diff
(100.0 %id)
DC402258 testis .b 1 to 519 5 to 523       523/523
(100 %)
0 diff
(100 %id)
DB450282 testis .b 32 to 498 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
BF851621 lung_normal .b 2182 to 2649 1 to 464       464/524
(88 %)
12 diff
(97.8 %id)
AI820928 ovarian tumor, ovary .b 2330 to 2763 1 to 433   AAA   433/433
(100 %)
7 diff
(98.4 %id)
BX106476 ovarian tumor, ovary .b 2331 to 2763 1 to 433   AAA   433/433
(100 %)
2 diff
(99.6 %id)
AI821678 ovarian tumor, ovary .b 2363 to 2758 401 to 6       396/401
(98 %)
0 diff
(100 %id)
AA813084   .b 2500 to 2763 267 to 4       264/267
(98 %)
0 diff
(100 %id)
AA405805 ovarian tumor, ovary .b 2502 to 2763 260 to 1       260/260
(100 %)
3 diff
(98.9 %id)
AA410617 ovarian tumor, ovary .b 2541 to 2829 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
BM987973 mixed .b 2570 to 2763 212 to 19   AAA   194/194
(100 %)
0 diff
(100 %id)
AA235536 ovarian tumor, ovary .b 2574 to 2831 258 to 1   tiling clone,   258/258
(100 %)
1 diff
(99.7 %id)
DB512767.
matches multiple genes
testis .b 2766 to 2996 232 to 1     also hits gene TOR2A 232/232
(100 %)
9 diff
(96.2 %id)
BP392378 pancreatic islet .b 2766 to 3184 419 to 1       419/419
(100 %)
0 diff
(100 %id)
AW302989 invasive adenocarcinoma, lung .b 2767 to 3142 388 to 13       376/426
(88 %)
0 diff
(100 %id)
AW268779 invasive adenocarcinoma, lung .b 2767 to 3142 402 to 27       376/426
(88 %)
0 diff
(100 %id)
BP398681 pancreatic islet .b 2768 to 3118 351 to 1       351/351
(100 %)
0 diff
(100 %id)
BE138646 invasive adenocarcinoma, lung .b 2768 to 3142 387 to 13       375/408
(91 %)
0 diff
(100 %id)
BP384930 pancreatic islet .b 2777 to 3274 498 to 1   tiling clone,   498/498
(100 %)
0 diff
(100 %id)
W22172 eye, retina .b 3027 to 3518 15 to 513   tiling clone,   499/662
(75 %)
16 diff
(97.6 %id)
AK302422 testis .c 1 to 1604 5 to 1608   tiling clone,   1608/1608
(100 %)
2 diff
(99.9 %id)
DB062180 testis .c 1 to 526 5 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DB445239.
matches multiple genes
testis .c 82 to 421 98 to 437     also hits gene TOR2A 437/437
(100 %)
2 diff
(99.6 %id)
BC032411 Blood, adult leukocytes .c 441 to 3087 1 to 2647   tiling clone, available from MGC, AAA   2647/2647
(100 %)
1 diff
(100.0 %id)
BI908416 leukocyte .c 441 to 1254 1 to 824   available from MGC,   824/824
(100 %)
14 diff
(98.4 %id)
TI_57235444   .c 441 to 1254 26 to 849       824/849
(97 %)
19 diff
(97.8 %id)
AK128011 testis .d 1 to 2370 2 to 2372 S57G Q213A H214A A215R L216T ... tiling clone, available from FLJ,   2372/2372
(100 %)
6 diff
(99.8 %id)
DB057032 testis .d 1 to 524 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DB338987 testis .d 1827 to 2370 544 to 1       544/544
(100 %)
2 diff
(99.7 %id)
AK294862 brain .e 82 to 1675 101 to 1694 exact tiling clone,   1694/1694
(100 %)
3 diff
(99.9 %id)
DA225537 brain .e 82 to 635 101 to 654   capped   653/653
(100 %)
0 diff
(100 %id)
DA936513 Spleen .f 1 to 516 3 to 518   tiling clone, capped   517/517
(100 %)
0 diff
(100 %id)
AK074105 Spleen .f 14 to 5152 1 to 5138   tiling clone, available from FLJ,   5138/5138
(100 %)
17 diff
(99.7 %id)
DB332875 Spleen .f 2106 to 2426 321 to 1   tiling clone,   321/321
(100 %)
6 diff
(98.2 %id)
BP213167 cerebrum .g 1 to 580 1 to 580 exact tiling clone,   580/580
(100 %)
0 diff
(100 %id)
DB052935 testis .h 1 to 562 2 to 563 exact tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
DB084197 testis .i-u 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
AA405928 ovarian tumor, ovary Gene TTC16, variant not shown         This clone was ignored    
CF264890 Brain glioblastoma Gene TTC16, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C