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Gene TRIP4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
276 supporting clones for gene TRIP4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG166305 hypernephroma, cell line, Kidney .a 1 to 732 4 to 727       727/767
(94 %)
16 diff
(98.0 %id)
NM_016213.4   .a 1 to 2040 4 to 2043 exact RefSeq, AAA   2043/2043
(100 %)
0 diff
(100 %id)
DB209725 trachea .a 1 to 557 2 to 558   tiling clone, capped   557/557
(100 %)
2 diff
(99.7 %id)
DA925263 small intestine .a 4 to 588 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA633738 Kidney .a 5 to 566 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA703573   .a 5 to 478 2 to 475   capped   474/476
(99 %)
1 diff
(99.8 %id)
DB192611 ovary, tumor tissue .a 5 to 564 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB015966 esophageal, tumor tissue .a 8 to 573 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BC012448 Lung, large cell carcinoma .a 15 to 2040 1 to 2026 exact available from MGC, AAA   2026/2026
(100 %)
2 diff
(100.0 %id)
BI755539 brain .a 15 to 895 1 to 889       889/892
(99 %)
23 diff
(97.5 %id)
DA616474   .a 25 to 610 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DB045712 testis .a 25 to 485 2 to 462   capped   461/461
(100 %)
1 diff
(99.8 %id)
BP350382 brain .a 29 to 611 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP225741   .a 30 to 587 1 to 558       558/558
(100 %)
8 diff
(98.6 %id)
DA610391   .a 30 to 594 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
BP271159 small intestine .a 30 to 609 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
DA000949   .a 31 to 558 2 to 530   capped   529/529
(100 %)
3 diff
(99.5 %id)
DA137992 alzheimer cortex .a 31 to 574 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA159954 amygdala .a 31 to 551 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA629566 Kidney .a 31 to 609 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA920216 small intestine .a 31 to 610 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA925029 small intestine .a 31 to 599 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB028785 testis .a 31 to 626 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB057928 testis .a 31 to 520 2 to 492   capped   491/491
(100 %)
2 diff
(99.6 %id)
BI560670 testis .a 32 to 769 1 to 738       738/924
(79 %)
14 diff
(98.5 %id)
TI_44349660   .a 32 to 769 85 to 822       738/1008
(73 %)
17 diff
(98.4 %id)
BG724110 testis .a 33 to 788 1 to 756       756/758
(99 %)
10 diff
(98.7 %id)
DA963951 stomach .a 33 to 589 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA964144 stomach .a 33 to 581 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA152116 amygdala .a 34 to 603 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
BX477759   .a 35 to 476 1 to 442       442/442
(100 %)
1 diff
(99.8 %id)
BE788322 large cell carcinoma, lung .a 35 to 675 1 to 649       649/929
(69 %)
23 diff
(97.6 %id)
BP364561 lung .a 35 to 615 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA007374   .a 36 to 586 2 to 556   capped   555/555
(100 %)
5 diff
(99.1 %id)
DA702494   .a 36 to 494 2 to 460   capped   459/459
(100 %)
1 diff
(99.8 %id)
BP354236   .a 36 to 617 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP205311 coronary artery .a 37 to 617 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP227168   .a 37 to 618 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CB997210 placenta, pre-eclamptic placenta .a 37 to 824 28 to 820       793/820
(96 %)
20 diff
(97.6 %id)
CB961498 placenta, pre-eclamptic placenta .a 37 to 758 28 to 755       728/784
(92 %)
19 diff
(97.6 %id)
BP345744 synovial membrane .a 37 to 616 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP346432 synovial membrane .a 37 to 616 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP361649 thalamus .a 37 to 620 1 to 582       582/582
(100 %)
10 diff
(98.3 %id)
BP361754 thalamus .a 37 to 618 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP375407 uterus .a 37 to 602 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DA090690 cerebellum .a 38 to 614 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA151933 amygdala .a 38 to 607 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA181475 amygdala .a 38 to 519 2 to 487   capped   486/486
(100 %)
6 diff
(98.8 %id)
DA481186   .a 38 to 580 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA562922 heart .a 38 to 607 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA890886 rectum .a 38 to 560 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DA899695 skeletal muscle .a 38 to 597 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB015527 esophageal, tumor tissue .a 38 to 566 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DB104286 thymus .a 38 to 604 2 to 568   capped   567/568
(99 %)
1 diff
(99.9 %id)
DB171185 kidney, tumor tissue .a 38 to 634 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA042513 bladder .a 39 to 551 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
BX483215   .a 40 to 429 1 to 390       390/390
(100 %)
2 diff
(99.5 %id)
AL703335 human skeletal muscle .a 41 to 398 1 to 358       358/358
(100 %)
0 diff
(100 %id)
BI837499 pooled pancreas and spleen .a 41 to 795 1 to 756       756/757
(99 %)
5 diff
(99.4 %id)
DA912916   .a 41 to 589 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA918808 small intestine .a 41 to 620 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DA486688 brain .a 42 to 620 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BI838748 pooled pancreas and spleen .a 44 to 652 1 to 635       635/635
(100 %)
37 diff
(94.2 %id)
BM907154 large cell carcinoma, lung .a 44 to 948 1 to 914       914/988
(92 %)
18 diff
(98.2 %id)
TI_57161949   .a 44 to 652 1 to 635       635/635
(100 %)
37 diff
(94.2 %id)
BX376830 Neuroblastoma Cot 50-normalized .a 45 to 1115 46 to 1113       1068/1190
(89 %)
40 diff
(96.7 %id)
DA593184 lung .a 45 to 551 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DA691783   .a 45 to 601 2 to 561   capped   560/561
(99 %)
4 diff
(99.3 %id)
DA846985 placenta .a 46 to 615 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA929164 small intestine .a 46 to 599 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AF168418   .a 47 to 2040 142 to 2135 G157R L164A tiling clone, AAA   1994/2135
(93 %)
11 diff
(99.5 %id)
BF172124 blood .a 47 to 299 1 to 247       247/250
(98 %)
21 diff
(91.6 %id)
AL541562 placenta .a 47 to 1001 1 to 951       951/951
(100 %)
5 diff
(99.5 %id)
DA689966   .a 47 to 584 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BI838010 pooled pancreas and spleen .a 48 to 883 1 to 841       841/856
(98 %)
15 diff
(98.3 %id)
BQ070841 brain, neuroblastoma, cell line .a 48 to 888 1 to 846       846/1025
(82 %)
11 diff
(99.0 %id)
TI_57163455   .a 48 to 898 37 to 892       856/892
(95 %)
21 diff
(97.7 %id)
DA924717 small intestine .a 48 to 614 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CR616759 Placenta Cot 25-normalized .a 49 to 2011 1 to 1963 exact tiling clone,   1963/1963
(100 %)
0 diff
(100 %id)
AL544757 placenta, Placenta Cot 25-normalized .a 49 to 1024 1 to 974       974/977
(99 %)
8 diff
(99.2 %id)
DB459550 testis .a 50 to 523 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
AK314319   .a 55 to 1803 1 to 1749 exact     1749/1749
(100 %)
0 diff
(100 %id)
DA625662 Kidney .a 55 to 604 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB109351 thymus .a 55 to 625 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA573998   .a 56 to 613 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BM808340 ovary (pool of 3) .a 57 to 571 65 to 582       518/1352
(38 %)
22 diff
(98.4 %id)
CV022913 mixed .a 58 to 677 1 to 620       620/622
(99 %)
3 diff
(99.6 %id)
BM811409 ovary (pool of 3) .a 58 to 932 14 to 892       879/1033
(85 %)
15 diff
(98.6 %id)
BP424149 small intestine .a 59 to 576 7 to 524     Submitted on the opposite strand 518/524
(98 %)
6 diff
(98.9 %id)
BQ637788 eye, retina .a 60 to 625 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BI117742 lung, small cell carcinoma .a 61 to 858 1 to 793       793/794
(99 %)
18 diff
(97.8 %id)
CR990636 T-Lymphocytes .a 61 to 866 1 to 807       807/813
(99 %)
2 diff
(99.8 %id)
CX872029 embryonic stem .a 62 to 853 1 to 792       792/792
(100 %)
0 diff
(100 %id)
AW082953 colon, moderately differentiated adenocarcinoma .a 63 to 561 1 to 501     Submitted on the opposite strand 501/501
(100 %)
6 diff
(98.9 %id)
CN363903 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 78 to 803 7 to 732       726/732
(99 %)
0 diff
(100 %id)
BE514170 Burkitt lymphoma, lymph .a 80 to 739 1 to 678       678/758
(89 %)
39 diff
(94.9 %id)
BE396502 Burkitt lymphoma, lymph .a 81 to 755 1 to 672       672/726
(92 %)
8 diff
(98.9 %id)
BE560549 Burkitt lymphoma, lymph .a 81 to 866 1 to 775       775/812
(95 %)
34 diff
(95.9 %id)
AA308180 colon .a 89 to 490 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
AW192610 adenocarcinoma, Pancreas .a 102 to 318 217 to 1       217/217
(100 %)
0 diff
(100 %id)
BF175616 blood .a 116 to 375 1 to 258       258/258
(100 %)
2 diff
(99.3 %id)
FN052594 breast carcinoma .a 132 to 202 1 to 71       71/71
(100 %)
3 diff
(95.8 %id)
AW402321 lymph .a 321 to 804 1 to 484       484/484
(100 %)
5 diff
(99.0 %id)
TI_154138667   .a 328 to 824 81 to 577       497/497
(100 %)
0 diff
(100 %id)
FN158196 breast carcinoma .a 332 to 442 109 to 4     Submitted on the opposite strand 106/109
(97 %)
0 diff
(100 %id)
BE740238 adenocarcinoma cell line, ovary .a 339 to 1157 1 to 811       811/891
(91 %)
16 diff
(98.3 %id)
BF836375 head_neck .a 341 to 858 532 to 12     Submitted on the opposite strand 521/532
(97 %)
0 diff
(100 %id)
BQ229009 melanotic melanoma, skin .a 420 to 1232 12 to 828       817/866
(94 %)
14 diff
(98.4 %id)
CN363906 embryonic stem cells, cell lines H1, H7, andH9 .a 423 to 1031 13 to 621       609/621
(98 %)
6 diff
(99.1 %id)
L40371   .a 430 to 1530 1 to 1100       1102/1100
(100 %)
7 diff
(99.4 %id)
AA374952 lung .a 466 to 766 1 to 303       303/303
(100 %)
3 diff
(99.1 %id)
AA307128 colon .a 474 to 974 1 to 502       502/507
(99 %)
3 diff
(99.5 %id)
AW950147   .a 475 to 1008 1 to 540       540/587
(91 %)
14 diff
(97.7 %id)
CB122650 Liver .a 481 to 1021 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BX371641 Placenta Cot 25-normalized .a 583 to 1477 896 to 1       896/896
(100 %)
8 diff
(99.2 %id)
AA090320   .a 620 to 754 1 to 133       133/133
(100 %)
5 diff
(96.3 %id)
AA099794.
matches multiple genes
colon, tumor .a 691 to 1094 408 to 2     Submitted on the opposite strand, also hits gene SLC12A2 407/408
(99 %)
3 diff
(99.3 %id)
CB214991 normal endometrium, late proliferativephase, cycle day 13, uterus .a 697 to 1325 1 to 629       629/629
(100 %)
0 diff
(100 %id)
CB216417 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 697 to 1221 1 to 525       525/525
(100 %)
0 diff
(100 %id)
BQ225927 embryonal carcinoma, cell line, testis .a 710 to 1540 1 to 834       834/1073
(77 %)
7 diff
(99.4 %id)
BG674497 skin .a 748 to 1632 4 to 883       880/1046
(84 %)
18 diff
(98.3 %id)
FN052609 breast carcinoma .a 772 to 876 1 to 105       105/105
(100 %)
0 diff
(100 %id)
DR158200 human embryonic stem cells differentiated toan early endodermal cell type .a 836 to 1610 1 to 775       775/775
(100 %)
0 diff
(100 %id)
BG945151 amnion_normal .a 837 to 1123 301 to 15       287/301
(95 %)
0 diff
(100 %id)
BG121152 adenocarcinoma, cell line, Liver .a 883 to 1583 8 to 696       689/928
(74 %)
22 diff
(97.7 %id)
BM799365 Ascites, stomach .a 965 to 1540 10 to 585       576/587
(98 %)
8 diff
(98.7 %id)
AL568964 placenta .a 1012 to 2024 1012 to 1       1012/1012
(100 %)
3 diff
(99.8 %id)
CR739562 lung .a 1062 to 1539 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
TI_154044125   .a 1092 to 2040 1009 to 88   AAA   900/1002
(89 %)
36 diff
(96.5 %id)
AL570778 placenta, Placenta Cot 25-normalized .a 1099 to 2011 909 to 1       909/909
(100 %)
12 diff
(98.7 %id)
R01283 liver and spleen .a 1138 to 1513 1 to 393       388/395
(98 %)
28 diff
(93.0 %id)
BI032320 nervous_normal .a 1154 to 1493 350 to 11       340/350
(97 %)
0 diff
(100 %id)
AA429074 ovarian tumor, ovary .a 1163 to 1569 1 to 407       407/407
(100 %)
3 diff
(99.3 %id)
BM831023 stomach .a 1209 to 1759 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BI032325 nervous_normal .a 1212 to 1666 458 to 3       456/458
(99 %)
3 diff
(99.4 %id)
BG213261   .a 1225 to 2009 1 to 785       785/785
(100 %)
27 diff
(96.6 %id)
TI_149293331   .a 1227 to 2031 875 to 84   AAA   792/961
(82 %)
18 diff
(98.2 %id)
BG954491 colon .a 1228 to 1622 51 to 446       396/447
(88 %)
10 diff
(97.8 %id)
CB528779 Aveolar Macrophage, lung .a 1235 to 2037 802 to 13   AAA   790/790
(100 %)
17 diff
(97.9 %id)
BM975077 lung .a 1259 to 2031 783 to 19   AAA   765/768
(99 %)
16 diff
(98.0 %id)
CA425850 cell lines, Chondrosarcoma .a 1265 to 2040 794 to 19   AAA   776/776
(100 %)
5 diff
(99.4 %id)
AA282728 germinal center B cell .a 1270 to 1572 1 to 303       303/303
(100 %)
0 diff
(100 %id)
AA476857 ovarian tumor, ovary .a 1277 to 1681 15 to 418       404/418
(96 %)
7 diff
(98.4 %id)
AA456796 ovarian tumor, ovary .a 1282 to 1720 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
AA044146 uterus .a 1288 to 1535 1 to 249       249/249
(100 %)
1 diff
(99.6 %id)
R97762 liver and spleen .a 1312 to 1736 1 to 425       425/443
(95 %)
7 diff
(98.5 %id)
CA450045 Human Lung Epithelial cells, lung .a 1351 to 2040 708 to 19   AAA   690/690
(100 %)
1 diff
(99.9 %id)
CA412731 Chondrosarcoma Grade II, Left Pelvis .a 1400 to 2040 659 to 19   AAA   641/641
(100 %)
1 diff
(99.9 %id)
CB528327 Aveolar Macrophage, lung .a 1400 to 2031 650 to 19   AAA   632/632
(100 %)
1 diff
(99.9 %id)
BE005353 breast_normal .a 1413 to 1617 1 to 208       208/231
(90 %)
8 diff
(96.6 %id)
BE856956 pooled .a 1423 to 2040 628 to 12   AAA   617/617
(100 %)
11 diff
(98.3 %id)
AA725894   .a 1446 to 2042 598 to 2       597/598
(99 %)
1 diff
(99.9 %id)
R63052 placenta .a 1460 to 1765 15 to 326   fully sequenced,   312/326
(95 %)
13 diff
(96.1 %id)
AA725843   .a 1484 to 2042 560 to 2       559/560
(99 %)
1 diff
(99.9 %id)
AI151174 uterus .a 1485 to 2040 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
CN363904 embryonic stem cells, cell lines H1, H7, andH9 .a 1487 to 2002 516 to 1     Submitted on the opposite strand 516/516
(100 %)
3 diff
(99.5 %id)
AI796778 carcinoid, lung .a 1490 to 2042 553 to 1       553/553
(100 %)
6 diff
(99.0 %id)
AA631182 colon, colon tumor RER+ .a 1498 to 2042 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
AI684470 pooled .a 1512 to 2030 519 to 1       519/519
(100 %)
1 diff
(99.9 %id)
AI758791 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1539 to 2041 503 to 1       503/503
(100 %)
2 diff
(99.7 %id)
AW517402 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1554 to 2040 487 to 1       487/487
(100 %)
1 diff
(99.8 %id)
AW873141 adrenal gland, neuroblastoma .a 1558 to 2037 480 to 1       480/484
(99 %)
0 diff
(100 %id)
AI131094 heart .a 1566 to 2037 477 to 6       472/477
(98 %)
1 diff
(99.8 %id)
DB525006 testis .a 1567 to 2040 1 to 474     Submitted on the opposite strand 474/474
(100 %)
3 diff
(99.4 %id)
AA282254 germinal center B cell .a 1573 to 2031 459 to 1       459/460
(99 %)
1 diff
(99.8 %id)
AI810099 pooled .a 1594 to 2040 463 to 17   AAA   447/447
(100 %)
5 diff
(98.9 %id)
AW629203 pooled .a 1594 to 2042 453 to 5       449/453
(99 %)
1 diff
(99.8 %id)
BE042724 colon, moderately-differentiated adenocarcinoma .a 1594 to 2042 449 to 1       449/449
(100 %)
1 diff
(99.8 %id)
BE042802 colon, moderately-differentiated adenocarcinoma .a 1595 to 2042 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
BG218022   .a 1623 to 2040 1 to 412   AAA   412/412
(100 %)
9 diff
(97.9 %id)
BJ992832 hepatoblastoma .a 1623 to 2003 381 to 1       381/382
(99 %)
6 diff
(98.5 %id)
AI554493 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1623 to 2040 418 to 1       418/428
(97 %)
6 diff
(98.6 %id)
BG197111   .a 1624 to 2031 36 to 447   AAA   412/447
(92 %)
11 diff
(97.6 %id)
BG200218   .a 1625 to 2039 1 to 410   AAA   410/410
(100 %)
11 diff
(97.4 %id)
BG183104   .a 1626 to 2042 1 to 417       417/436
(95 %)
11 diff
(97.5 %id)
BG183105   .a 1626 to 1876 1 to 251       251/251
(100 %)
8 diff
(96.9 %id)
BG200824   .a 1627 to 2031 1 to 405   AAA   405/405
(100 %)
4 diff
(99.1 %id)
BG210093   .a 1628 to 2042 1 to 416       416/949
(43 %)
7 diff
(99.3 %id)
BG206453   .a 1630 to 2039 1 to 405   AAA   405/405
(100 %)
11 diff
(97.3 %id)
AA811682 germinal center B cell .a 1630 to 2037 423 to 16   AAA   408/408
(100 %)
1 diff
(99.8 %id)
AI005154 pooled .a 1630 to 2042 413 to 1       413/413
(100 %)
2 diff
(99.6 %id)
AI034159 parathyroid gland, parathyroid tumor .a 1630 to 2039 422 to 13   AAA   410/410
(100 %)
2 diff
(99.6 %id)
AI242645 follicular lymphoma, lymph node .a 1630 to 2042 415 to 1       415/417
(99 %)
10 diff
(97.7 %id)
AI681923 carcinoid, lung .a 1630 to 2042 414 to 2       413/419
(98 %)
1 diff
(99.8 %id)
BG188897   .a 1631 to 2031 5 to 404   AAA   400/404
(99 %)
7 diff
(98.3 %id)
AI589210 Kidney .a 1631 to 2040 410 to 1       410/432
(94 %)
1 diff
(99.8 %id)
BG186281   .a 1635 to 2042 9 to 414   AAA   406/414
(98 %)
18 diff
(95.7 %id)
AW302374 brain, three pooled meningiomas .a 1637 to 2042 407 to 2       388/407
(95 %)
4 diff
(99.1 %id)
BG197113   .a 1642 to 2031 1 to 389   AAA   389/389
(100 %)
3 diff
(99.3 %id)
BG198231   .a 1642 to 2039 15 to 407   AAA   393/407
(96 %)
7 diff
(98.3 %id)
BG213761   .a 1642 to 2040 1 to 398   AAA   398/398
(100 %)
3 diff
(99.3 %id)
AI191396 lung .a 1644 to 2040 413 to 17   AAA   397/397
(100 %)
2 diff
(99.5 %id)
BG208026   .a 1649 to 2040 1 to 392   AAA   392/392
(100 %)
4 diff
(99.0 %id)
BG188125   .a 1650 to 1788 1 to 139       139/139
(100 %)
11 diff
(92.1 %id)
BG187312   .a 1652 to 2032 1 to 381       381/723
(52 %)
7 diff
(99.1 %id)
AA468569 colon .a 1653 to 2034 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AA725788   .a 1654 to 2042 390 to 2       389/391
(99 %)
0 diff
(100 %id)
AI351485   .a 1654 to 1940 288 to 1       288/288
(100 %)
1 diff
(99.7 %id)
AI248326 liver and spleen .a 1656 to 2031 402 to 27   AAA   376/376
(100 %)
4 diff
(99.0 %id)
BQ026049 placenta .a 1656 to 2039 402 to 18   AAA   385/387
(99 %)
4 diff
(99.0 %id)
AA969987 pooled .a 1663 to 2031 383 to 15   AAA   369/373
(98 %)
0 diff
(100 %id)
AW243798 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1664 to 2031 389 to 22   AAA   368/368
(100 %)
1 diff
(99.8 %id)
AW439479 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1664 to 2041 377 to 1       377/377
(100 %)
4 diff
(99.0 %id)
AK000433   .a 1677 to 2040 1 to 364   available from FLJ, AAA   364/364
(100 %)
0 diff
(100 %id)
AW339134 adenocarcinoma, Pancreas .a 1680 to 2031 351 to 1       351/351
(100 %)
7 diff
(98.1 %id)
BG197112   .a 1689 to 2042 1 to 354       354/356
(99 %)
7 diff
(98.1 %id)
AA809910 germinal center B cell .a 1722 to 2031 321 to 12   AAA   310/310
(100 %)
3 diff
(99.1 %id)
BI495468 cochlea, ear .a 1727 to 2040 8 to 321   fully sequenced, AAA   314/321
(97 %)
0 diff
(100 %id)
BG192027   .a 1731 to 2031 1 to 299   AAA   299/299
(100 %)
11 diff
(96.4 %id)
BG195622   .a 1732 to 2040 1 to 309   AAA   309/309
(100 %)
5 diff
(98.4 %id)
AA705843   .a 1736 to 2042 308 to 2       307/309
(99 %)
0 diff
(100 %id)
BG193591   .a 1736 to 2040 7 to 311   AAA   305/311
(98 %)
6 diff
(98.1 %id)
R62995 placenta .a 1736 to 2038 308 to 1   fully sequenced,   308/308
(100 %)
6 diff
(98.1 %id)
R97763 liver and spleen .a 1736 to 2038 321 to 8       314/477
(65 %)
0 diff
(100 %id)
AA044262 uterus .a 1736 to 2040 305 to 1       305/335
(91 %)
1 diff
(99.8 %id)
AA586526 bulk tumor, colon .a 1736 to 2040 305 to 1       305/315
(96 %)
0 diff
(100 %id)
AW874139 follicular carcinoma, thyroid .a 1736 to 2031 312 to 12   AAA   301/308
(97 %)
8 diff
(97.5 %id)
AW294281   .a 1760 to 2040 298 to 18   AAA   281/281
(100 %)
0 diff
(100 %id)
AA631273 colon, colon tumor RER+ .a 1765 to 2039 275 to 1       275/275
(100 %)
0 diff
(100 %id)
BF941675 Prostate .a 1769 to 2041 273 to 1       273/273
(100 %)
0 diff
(100 %id)
BG956040 colon .a 1784 to 1899 1 to 115       115/115
(100 %)
8 diff
(93.1 %id)
BG954900 colon .a 1793 to 1899 11 to 119       109/119
(91 %)
8 diff
(93.3 %id)
AA622172 colon, colon tumor RER+ .a 1818 to 2028 211 to 1       211/211
(100 %)
0 diff
(100 %id)
AI243972 Kidney .a 1831 to 2040 221 to 12   AAA   210/210
(100 %)
0 diff
(100 %id)
BI495467 cochlea, ear .a 1863 to 2023 161 to 1   fully sequenced,   161/161
(100 %)
1 diff
(99.4 %id)
AW273620 lung, two pooled squamous cell carcinomas .a 1871 to 2037 183 to 15   AAA   169/169
(100 %)
3 diff
(98.3 %id)
FN108658 breast carcinoma .a 1970 to 2038 1 to 69       69/72
(95 %)
1 diff
(98.7 %id)
DB013738 esophageal, tumor tissue .b 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
BP331776 renal proximal tubule .b 65 to 657 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
R15144 whole brain .b 498 to 816 1 to 322   tiling clone, to resequence,   322/443
(72 %)
5 diff
(98.9 %id)
R41566 whole brain .b 2021 to 2276 276 to 14   tiling clone, to resequence, AAA   263/263
(100 %)
7 diff
(97.4 %id)
CR608924 placenta .c 1 to 1533 4 to 1536 exact tiling clone,   1536/1536
(100 %)
0 diff
(100 %id)
AL542271 placenta .c 1 to 730 4 to 732   fully sequenced,   732/732
(100 %)
1 diff
(99.9 %id)
AL569341 placenta .c 669 to 1533 869 to 1   fully sequenced,   869/869
(100 %)
16 diff
(98.2 %id)
BG714069 brain, hypothalamus .d 1 to 767 1 to 770 C2G K221E P222T C223L R224Q ... tiling clone,   770/774
(99 %)
11 diff
(98.6 %id)
BG706701 brain, hypothalamus .d 69 to 770 1 to 703   tiling clone,   703/703
(100 %)
6 diff
(99.2 %id)
BQ775371 Bone, Human Chondrosarcoma Cell Line .e -10 to 652 681 to 17 I5X Q42P W43V V44G D45* tiling clone, AAA   665/706
(94 %)
6 diff
(99.2 %id)
CK821365 Pancreas, Purified pancreatic islet .e 116 to 655 551 to 12   tiling clone, AAA Submitted on the opposite strand 540/540
(100 %)
1 diff
(99.9 %id)
BM314344 Pancreas, Purified pancreatic islet .e 128 to 658 532 to 2       531/532
(99 %)
0 diff
(100 %id)
BM466513 eye, retinoblastoma .e 186 to 652 1 to 467   AAA   467/467
(100 %)
0 diff
(100 %id)
AI005621 pooled germ cell tumors .e 313 to 652 339 to 1       339/342
(99 %)
2 diff
(99.5 %id)
AW384989 head_neck .e 364 to 957 1 to 594   tiling clone,   594/608
(97 %)
6 diff
(99.1 %id)
BP215823 corpus callosum .f 1 to 566 1 to 567 exact tiling clone,   567/581
(97 %)
1 diff
(99.9 %id)
CA429758 Cell Line, Chondrosarcoma .g 1 to 557 570 to 14 exact tiling clone, AAA   557/557
(100 %)
1 diff
(99.9 %id)
AA150879 uterus .h 1 to 425 1 to 426 E5* tiling clone, fully sequenced,   426/426
(100 %)
2 diff
(99.6 %id)
AA150771 uterus .h 290 to 437 148 to 1   tiling clone, fully sequenced,   148/148
(100 %)
0 diff
(100 %id)
AW593026 pooled .i 1 to 447 447 to 1 exact tiling clone,   447/447
(100 %)
2 diff
(99.6 %id)
DB183468 liver, tumor tissue .j 1 to 460 2 to 465   tiling clone, capped   464/464
(100 %)
4 diff
(99.2 %id)
BX499487 Liver .j 219 to 581 1 to 363   tiling clone,   363/363
(100 %)
2 diff
(99.5 %id)
BM689817 eye, Retina Foveal and Macular .j 526 to 1008 8 to 490   tiling clone,   483/490
(98 %)
6 diff
(98.8 %id)
BM661850 eye, Retina Foveal and Macular .j 1081 to 1598 536 to 19   tiling clone, AAA   518/518
(100 %)
2 diff
(99.7 %id)
BI908371 leukocyte .k 1 to 847 1 to 848   tiling clone,   848/848
(100 %)
1 diff
(99.9 %id)
TI_57235398   .k 1 to 847 88 to 935       848/935
(90 %)
9 diff
(99.1 %id)
DA998959 breast, tumor tissue .k 9 to 576 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BQ690992 ductal carcinoma, cell line, Pancreas .k 17 to 896 1 to 882 H35Q K36R D37Q K38T L39V ... tiling clone,   882/894
(98 %)
9 diff
(99.0 %id)
DA712387   .l 1 to 566 2 to 568 exact tiling clone, capped   567/567
(100 %)
2 diff
(99.7 %id)
DA717417   .l 27 to 573 2 to 548 exact tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
BI833879 pooled pancreas and spleen .l 43 to 756 1 to 725 exact tiling clone,   725/1043
(69 %)
16 diff
(98.5 %id)
TI_57166971   .l 43 to 887 36 to 903 exact tiling clone,   863/1078
(80 %)
49 diff
(95.5 %id)
DN993523 brain, whole brain .l 57 to 571 1 to 517 R4K R5E S6I F7I S8Q ...     517/517
(100 %)
10 diff
(98.1 %id)
DN990179 brain, whole brain .m 1 to 636 8 to 643 exact tiling clone,   636/643
(98 %)
6 diff
(99.1 %id)
AL602144   .n-u 1 to 602 1 to 599 R24N W25G R26G W27G L28W ... tiling clone,   599/599
(100 %)
7 diff
(98.9 %id)
BP226263   .o 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DA924027 small intestine .o 9 to 586 2 to 579 exact tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
AW572576 adenocarcinoma, Pancreas .p-u 1 to 454 454 to 1 exact tiling clone,   454/454
(100 %)
0 diff
(100 %id)
AA662763 normal prostate, Prostate .p-u 66 to 462 401 to 5 exact tiling clone,   397/401
(99 %)
0 diff
(100 %id)
BF438858 pooled .p-u 105 to 462 363 to 6 exact     358/363
(98 %)
0 diff
(100 %id)
BF735062 amnion_normal Gene TRIP4, variant not shown         Submitted on the opposite strand    
BF806501 colon_ins Gene TRIP4, variant not shown              
DB309315 hippocampus Gene TRIP4, variant not shown         This clone was ignored    
DA324765 hippocampus Gene TRIP4, variant not shown       capped This clone was ignored    
BX096818   Gene TRIP4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CN363902 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene TRIP4, variant not shown         This clone was ignored    
CN363905 embryonic stem cells, DMSO-treated H9 cellline Gene TRIP4, variant not shown         Suspected internal deletion, this clone was ignored    
CV366534 testis_normal Gene TRIP4, variant not shown              
AV659097 corresponding non cancerous liver tissue Gene TRIP4, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV725381 hypothalamus Gene TRIP4, variant not shown         Suspected internal deletion, this clone was ignored    
AA449161   Gene TRIP4, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AA476490   Gene TRIP4, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AI611138 pooled germ cell tumors Gene TRIP4, variant not shown              
AW196432 pooled germ cell tumors Gene TRIP4, variant not shown       AAA      
BI832588 pooled pancreas and spleen Gene TRIP4, variant not shown         This clone was ignored    
BM918788 pooled pancreas and spleen Gene TRIP4, variant not shown         This clone was ignored    
TI_57218694   Gene TRIP4, variant not shown         This clone was ignored    
TI_57161939   Gene TRIP4, variant not shown         This clone was ignored    
TI_57165711   Gene TRIP4, variant not shown         Suspected internal deletion, this clone was ignored    
DB143318 thymus Gene TRIP4, variant not shown       capped This clone was ignored    
DB345534 thymus Gene TRIP4, variant not shown         This clone was ignored    
DB204865 trachea Gene TRIP4, variant not shown       capped      
DB348554 trachea Gene TRIP4, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI