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Gene TRIM38TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
377 supporting clones for gene TRIM38 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA603151   .a 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
2 diff
(99.7 %id)
BP377853 uterus .a 7 to 577 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BX471717   .a 83 to 673 1 to 591       591/591
(100 %)
3 diff
(99.5 %id)
BP228434   .a 89 to 670 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP377398 uterus .a 89 to 640 1 to 553       553/553
(100 %)
27 diff
(95.2 %id)
DA956184 Spleen .a 92 to 644 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP286740 lung .a 111 to 693 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA459338 tongue, tumor tissue .a 112 to 679 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA712820   .a 112 to 658 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
AU134378 ovary, tumor tissue .a 112 to 863 2 to 753   capped   752/752
(100 %)
5 diff
(99.4 %id)
DB204466 trachea .a 112 to 674 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AK313248   .a 113 to 1986 1 to 1874 L411P tiling clone,   1874/1874
(100 %)
2 diff
(99.9 %id)
DA445822 tongue, tumor tissue .a 113 to 679 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BP275369 Kidney .a 113 to 692 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP345973 synovial membrane .a 113 to 690 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP350609   .a 113 to 694 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB265284 uterus .a 113 to 681 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DB265322 uterus .a 113 to 613 2 to 503   capped   502/502
(100 %)
3 diff
(99.5 %id)
DA014035 adrenal gland .a 114 to 671 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA046110 bladder .a 114 to 681 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA381747 thalamus .a 114 to 661 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA427852 colon .a 114 to 677 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA474050   .a 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA556085   .a 114 to 637 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
DA558525   .a 114 to 675 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA597109   .a 114 to 611 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
DA651430   .a 114 to 659 2 to 547   capped   546/547
(99 %)
2 diff
(99.7 %id)
DA666980   .a 114 to 658 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA672531   .a 114 to 689 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA673542   .a 114 to 691 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA817159   .a 114 to 680 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA826269 pericardium .a 114 to 675 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA871990 Prostate .a 114 to 649 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA915936 small intestine .a 114 to 638 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA920219 small intestine .a 114 to 691 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA934123 Spleen .a 114 to 694 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA942814 Spleen .a 114 to 697 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA946811 Spleen .a 114 to 675 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA992530 synovial membrane tissue from rheumatioidarthritis .a 114 to 648 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB003082 breast, tumor tissue .a 114 to 656 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB014345 esophageal, tumor tissue .a 114 to 671 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB017799 esophageal, tumor tissue .a 114 to 683 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB121622 thymus .a 114 to 656 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB124610 thymus .a 114 to 680 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB152742 thymus .a 114 to 709 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DB157442 thymus .a 114 to 682 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB157847 thymus .a 114 to 691 2 to 579   capped   578/579
(99 %)
1 diff
(99.9 %id)
DB187668 liver, tumor tissue .a 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB200824 trachea .a 114 to 709 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB208463 trachea .a 114 to 659 2 to 550   capped   549/550
(99 %)
6 diff
(99.0 %id)
DB209621 trachea .a 114 to 683 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB221908 trachea .a 114 to 655 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB242394 stomach, tumor tissue .a 114 to 682 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB291358 uterus .a 114 to 697 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA009627 adrenal gland .a 115 to 672 2 to 559   capped   558/559
(99 %)
2 diff
(99.7 %id)
DA186185 amygdala .a 116 to 653 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
BP282516 bone marrow .a 116 to 702 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
BP282553 bone marrow .a 116 to 702 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA878843 Prostate .a 116 to 694 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA551842   .a 117 to 635 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA583934 lung .a 117 to 657 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA870822 Prostate .a 117 to 656 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA946359 Spleen .a 117 to 664 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB134732 thymus .a 117 to 686 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP286438 lung .a 119 to 700 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP287429 lung .a 119 to 697 1 to 583       583/583
(100 %)
12 diff
(98.0 %id)
BX490342   .a 125 to 745 1 to 621       621/621
(100 %)
3 diff
(99.6 %id)
DA630509 Kidney .a 125 to 694 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BX490720   .a 126 to 713 1 to 589       589/589
(100 %)
5 diff
(99.2 %id)
BF685377 leiomyosarcoma cell line, uterus .a 127 to 773 1 to 695       547/873
(62 %)
46 diff
(94.8 %id)
BX483214   .a 128 to 591 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
DA591486 lung .a 130 to 683 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA657620   .a 130 to 701 2 to 573   capped   572/575
(99 %)
2 diff
(99.7 %id)
DA670621   .a 130 to 724 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA817063   .a 130 to 696 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA979442 synovial membrane tissue from rheumatioidarthritis .a 130 to 637 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
TI_154153396   .a 130 to 744 80 to 694       615/615
(100 %)
12 diff
(98.1 %id)
BC026930 Lung, large cell carcinoma .a 154 to 2217 1 to 2064 M23I available from MGC, AAA   2064/2064
(100 %)
1 diff
(100.0 %id)
NM_006355.2   .a 154 to 3421 1 to 3268 exact RefSeq, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 3268/3268
(100 %)
0 diff
(100 %id)
BM475654 embryonal carcinoma, cell line, testis .a 157 to 1096 1 to 949       949/953
(99 %)
22 diff
(97.7 %id)
AL698337 human skeletal muscle .a 164 to 646 1 to 483       483/483
(100 %)
3 diff
(99.4 %id)
BM460124 leiomyosarcoma, uterus .a 167 to 1101 10 to 947       938/1054
(88 %)
30 diff
(97.2 %id)
BE789875 large cell carcinoma, lung .a 174 to 877 1 to 705       705/705
(100 %)
16 diff
(97.8 %id)
TI_154197817   .a 187 to 1087 91 to 973   AAA   885/966
(91 %)
29 diff
(97.0 %id)
TI_154196185   .a 191 to 1004 27 to 834       808/1061
(76 %)
25 diff
(97.7 %id)
BF850359 lung_normal .a 360 to 742 389 to 9     Submitted on the opposite strand 381/389
(97 %)
0 diff
(100 %id)
DA252076 caudate nucleus .a 432 to 906 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
BM475534 embryonal carcinoma, cell line, testis .a 443 to 1323 1 to 902       902/1050
(85 %)
34 diff
(96.8 %id)
BP205089 coronary artery .a 447 to 1027 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CF138002 lymph .a 470 to 1086 1 to 617       617/617
(100 %)
4 diff
(99.4 %id)
TI_154159627   .a 477 to 1112 91 to 724       634/671
(94 %)
16 diff
(97.7 %id)
TI_154167708   .a 477 to 1253 80 to 854       775/776
(99 %)
13 diff
(98.4 %id)
BQ352599 head_neck .a 532 to 811 8 to 291       284/291
(97 %)
6 diff
(98.0 %id)
U90547   .a 582 to 3421 15 to 2854 exact tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 2840/2854
(99 %)
6 diff
(99.8 %id)
CF135857 lymph .a 588 to 1291 1 to 700       700/700
(100 %)
9 diff
(98.8 %id)
CV024967 mixed .a 589 to 1234 1 to 645       645/645
(100 %)
6 diff
(99.1 %id)
TI_154164485   .a 595 to 1455 75 to 916       842/923
(91 %)
22 diff
(97.7 %id)
BF154497 breast_normal .a 730 to 1390 1 to 659       659/660
(99 %)
9 diff
(98.7 %id)
BM784731 Ascites, stomach .a 735 to 1137 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
BM772598 Ascites, stomach .a 735 to 1376 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
DA420403 cervix .a 787 to 1349 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
FN082634 breast carcinoma .a 840 to 930 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
BF083246 colon .a 1030 to 1555 531 to 8       524/531
(98 %)
2 diff
(99.7 %id)
AU138378 placenta .a 1047 to 1778 2 to 733   capped   732/732
(100 %)
2 diff
(99.8 %id)
CD688752 normal nasopharynx .a 1100 to 1590 22 to 512       491/512
(95 %)
11 diff
(97.9 %id)
TI_227712517   .a 1114 to 2050 1015 to 93   AAA   923/996
(92 %)
28 diff
(97.2 %id)
CD622448   .a 1122 to 1613 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
CD622450   .a 1122 to 1613 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
CD622449   .a 1123 to 1613 491 to 1       491/492
(99 %)
0 diff
(100 %id)
CD622451   .a 1123 to 1613 491 to 1       491/492
(99 %)
0 diff
(100 %id)
CN334677 embryonic stem cells, DMSO-treated H9 cellline .a 1124 to 1844 1 to 721       721/721
(100 %)
5 diff
(99.4 %id)
TI_154105495   .a 1139 to 2052 1001 to 100   AAA   902/939
(96 %)
21 diff
(97.8 %id)
C04872 heart .a 1173 to 1359 9 to 195       187/195
(95 %)
6 diff
(97.0 %id)
BE891450 melanotic melanoma, skin .a 1242 to 1763 1 to 524       524/528
(99 %)
6 diff
(98.9 %id)
AW851461 colon .a 1287 to 1537 255 to 5       251/255
(98 %)
0 diff
(100 %id)
AW851462 colon .a 1287 to 1537 255 to 5       251/255
(98 %)
0 diff
(100 %id)
Y10203   .a 1325 to 1886 553 to 1     Submitted on the opposite strand 553/589
(93 %)
15 diff
(97.5 %id)
AA463355 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1340 to 1794 1 to 455       455/455
(100 %)
0 diff
(100 %id)
CB242455 Human Lung Epithelial cells, lung .a 1348 to 2050 721 to 19   AAA   703/706
(99 %)
2 diff
(99.8 %id)
CD366778 Alveolar Macrophage, lung .a 1356 to 2050 713 to 19   AAA   695/695
(100 %)
0 diff
(100 %id)
CD365954 Alveolar Macrophage, lung .a 1362 to 2050 707 to 19   AAA   689/689
(100 %)
2 diff
(99.8 %id)
CA446662 Chondrosarcoma, Left Pubic Bone .a 1370 to 2052 699 to 17   AAA   683/683
(100 %)
0 diff
(100 %id)
BF890792 marrow .a 1374 to 1638 1 to 265       265/265
(100 %)
4 diff
(98.5 %id)
AW837528 leiomios .a 1383 to 1876 507 to 13       495/507
(97 %)
1 diff
(99.9 %id)
AA320622 adipose tissue, white .a 1397 to 1724 1 to 330       330/331
(99 %)
6 diff
(98.2 %id)
AW954993   .a 1398 to 1971 1 to 575       575/576
(99 %)
12 diff
(98.0 %id)
CD367045 Alveolar Macrophage, lung .a 1402 to 2050 666 to 19   AAA   648/648
(100 %)
3 diff
(99.6 %id)
AI363270 brain, glioblastoma (pooled) .a 1432 to 2050 617 to 1       617/617
(100 %)
11 diff
(98.3 %id)
BM466345 embryonal carcinoma, cell line, testis .a 1454 to 2434 6 to 999       994/1150
(86 %)
45 diff
(96.1 %id)
TI_149314067   .a 1460 to 2217 835 to 84   AAA   752/918
(81 %)
8 diff
(99.2 %id)
W92616 heart .a 1463 to 1798 1 to 346   fully sequenced,   346/346
(100 %)
4 diff
(98.9 %id)
CR996796 T-Lymphocytes .a 1482 to 1890 1 to 409   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 409/424
(96 %)
1 diff
(99.8 %id)
CB305861 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1489 to 2217 743 to 19   AAA   725/725
(100 %)
4 diff
(99.5 %id)
BX395833 Placenta Cot 25-normalized .a 1494 to 2669 1165 to 1       1165/1165
(100 %)
37 diff
(96.9 %id)
BQ026858 Chondrosarcoma, Left Pelvis .a 1513 to 2052 556 to 17   AAA   540/540
(100 %)
2 diff
(99.7 %id)
BU678744 lung, Primary Lung Epithelial Cells .a 1513 to 2050 556 to 19   AAA   538/538
(100 %)
0 diff
(100 %id)
AI766958 2 pooled tumors (clear cell type), Kidney .a 1516 to 2051 534 to 3       532/534
(99 %)
0 diff
(100 %id)
BM996839 lung, Metastatic Chondrosarcoma .a 1518 to 2048 549 to 19   AAA   531/531
(100 %)
2 diff
(99.7 %id)
AW772437 Kidney .a 1528 to 1981 454 to 1       454/454
(100 %)
9 diff
(98.1 %id)
BQ305769 breast .a 1539 to 2042 31 to 533       503/533
(94 %)
10 diff
(98.2 %id)
AA463862.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1540 to 2051 515 to 4     also hits gene RAB25 512/515
(99 %)
0 diff
(100 %id)
AA928298 pharynx, squamous cell carcinoma .a 1546 to 2050 537 to 33   AAA   505/505
(100 %)
18 diff
(96.5 %id)
AU155389 ovary, tumor tissue .a 1552 to 2050 494 to 1       494/497
(99 %)
17 diff
(96.6 %id)
BM750918 Ascites, stomach .a 1558 to 2089 1 to 538       538/538
(100 %)
5 diff
(99.1 %id)
BG231774 blood, lymphocyte .a 1564 to 2052 498 to 11   AAA   488/488
(100 %)
12 diff
(97.6 %id)
BF939853 brain, glioblastoma (pooled) .a 1576 to 2050 475 to 1       475/482
(98 %)
15 diff
(96.9 %id)
CB269539 adipose .a 1585 to 2226 1 to 642       642/642
(100 %)
7 diff
(99.0 %id)
AI371161   .a 1591 to 2050 491 to 34   AAA   458/458
(100 %)
17 diff
(96.3 %id)
AA676454 liver and spleen .a 1594 to 2051 459 to 2       458/459
(99 %)
0 diff
(100 %id)
AI056186 liver and spleen .a 1597 to 2051 456 to 2       455/456
(99 %)
0 diff
(100 %id)
BQ232795 embryonal carcinoma, cell line, testis .a 1630 to 2474 1 to 853       853/875
(97 %)
11 diff
(98.8 %id)
DA379613 thalamus .a 1636 to 2175 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
AI220566   .a 1657 to 2059 406 to 4       403/406
(99 %)
0 diff
(100 %id)
AI074340 senescent fibroblast .a 1663 to 2217 566 to 12   AAA   555/555
(100 %)
0 diff
(100 %id)
AW296838   .a 1746 to 2050 322 to 18   AAA   305/305
(100 %)
1 diff
(99.7 %id)
BP330088 rectum .a 1749 to 2331 1 to 580       580/582
(99 %)
14 diff
(97.6 %id)
W94543 heart .a 1768 to 2050 284 to 1   fully sequenced,   284/284
(100 %)
0 diff
(100 %id)
CA503015 Human Lung Epithelial cells, lung .a 1892 to 2538 667 to 22       646/669
(96 %)
0 diff
(100 %id)
CF529756 placenta .a 1940 to 2050 129 to 19   AAA   111/111
(100 %)
0 diff
(100 %id)
TI_149313491   .a 1956 to 2699 824 to 86   AAA   739/924
(79 %)
9 diff
(99.1 %id)
CB305395 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1990 to 2699 726 to 19   AAA   708/714
(99 %)
2 diff
(99.8 %id)
BX480416   .a 2041 to 2603 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM990175 lung, Metastatic Chondrosarcoma .a 2047 to 2699 671 to 19   AAA   653/676
(96 %)
1 diff
(99.9 %id)
TI_154034017   .a 2047 to 2699 750 to 98   AAA   653/911
(71 %)
3 diff
(99.7 %id)
AA737548 germinal center B cell .a 2086 to 2439 368 to 15   AAA   354/354
(100 %)
0 diff
(100 %id)
BI761847 pooled colon, kidney, stomach .a 2114 to 2700 1 to 589       589/934
(63 %)
4 diff
(99.6 %id)
TI_57148542   .a 2114 to 2700 65 to 653       589/998
(59 %)
4 diff
(99.6 %id)
BM148706 leukopheresis .a 2118 to 2413 299 to 4       296/304
(97 %)
0 diff
(100 %id)
AU157590 placenta .a 2146 to 2699 553 to 1       553/557
(99 %)
14 diff
(97.5 %id)
BG236455 blood, lymphocyte .a 2206 to 2702 503 to 7       497/503
(98 %)
0 diff
(100 %id)
AA194970 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2213 to 2702 1 to 490       490/495
(98 %)
2 diff
(99.6 %id)
AA767339 germinal center B cell .a 2229 to 2699 484 to 14   AAA   471/471
(100 %)
0 diff
(100 %id)
N78138 liver and spleen .a 2245 to 2640 1 to 398       398/398
(100 %)
5 diff
(98.8 %id)
AA831003 germinal center B cell .a 2256 to 2699 455 to 15   AAA   441/444
(99 %)
6 diff
(98.7 %id)
AA748365 germinal center B cell .a 2263 to 2699 449 to 15   AAA   435/435
(100 %)
2 diff
(99.6 %id)
F31816 pectoral muscle (after mastectomy) .a 2264 to 2626 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
AA836151 germinal center B cell .a 2265 to 2699 448 to 15   AAA   434/434
(100 %)
1 diff
(99.8 %id)
AA604435 breast .a 2274 to 2698 424 to 1       424/424
(100 %)
2 diff
(99.6 %id)
AA804392 germinal center B cell .a 2290 to 2699 423 to 14   AAA   410/410
(100 %)
0 diff
(100 %id)
AI865974 adenocarcinoma, Pancreas .a 2310 to 2699 391 to 1       391/391
(100 %)
5 diff
(98.8 %id)
AI401412 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2312 to 2699 400 to 13   AAA   388/388
(100 %)
0 diff
(100 %id)
BF062988 colon, colon tumor, RER+ .a 2314 to 2699 397 to 12   AAA   386/387
(99 %)
0 diff
(100 %id)
AI266069 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2336 to 2702 367 to 1       367/367
(100 %)
0 diff
(100 %id)
BP302952   .a 2402 to 2699 1 to 298   AAA   298/298
(100 %)
0 diff
(100 %id)
AI439783 lymph node, lymphoma, follicular mixed small and largecell .a 2408 to 2699 311 to 20   AAA   292/315
(92 %)
3 diff
(99.1 %id)
AW851460 colon .a 2412 to 2876 465 to 1       465/465
(100 %)
1 diff
(99.8 %id)
AA883908 parathyroid gland, parathyroid tumor .a 2425 to 2699 296 to 22   AAA   275/275
(100 %)
0 diff
(100 %id)
CR607808 Placenta Cot 25-normalized .b 1 to 1796 1 to 1796 exact tiling clone,   1796/1796
(100 %)
0 diff
(100 %id)
BX395834 Placenta Cot 25-normalized .b 1 to 1103 1 to 1095       1095/1095
(100 %)
14 diff
(98.8 %id)
BX369876 Placenta Cot 25-normalized .b 882 to 1788 1 to 890       890/896
(99 %)
26 diff
(97.1 %id)
BX640949 uterus .c 1 to 5008 1 to 5005 L80P tiling clone, available from DKFZ, AAA   5005/5005
(100 %)
15 diff
(99.8 %id)
BX503928   .c 5 to 442 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
BM906544 ovary (pool of 3) .c 26 to 910 1 to 892       892/1052
(84 %)
18 diff
(98.3 %id)
BM146993 leukopheresis .c 30 to 263 1 to 233       233/275
(84 %)
10 diff
(96.4 %id)
BM151846 leukopheresis .c 30 to 442 1 to 414       414/415
(99 %)
26 diff
(93.8 %id)
BM152377 leukopheresis .c 30 to 474 1 to 446       446/446
(100 %)
6 diff
(98.7 %id)
DA550921   .c 32 to 872 2 to 839   capped   838/838
(100 %)
16 diff
(98.1 %id)
TI_45235860   .c 37 to 792 46 to 800       755/800
(94 %)
7 diff
(99.2 %id)
BM457205 embryonal carcinoma, cell line, testis .c 46 to 911 1 to 873   AAA   873/1028
(84 %)
17 diff
(98.4 %id)
BG339747 leiomyosarcoma cell line, uterus .c 47 to 893 1 to 840       840/974
(86 %)
34 diff
(96.6 %id)
BI517510 pooled colon, kidney, stomach .c 47 to 792 1 to 745       745/745
(100 %)
1 diff
(99.9 %id)
BU431489 lymph .c 48 to 404 8 to 364       357/364
(98 %)
6 diff
(98.4 %id)
DA941434 Spleen .c 58 to 492 2 to 436   capped   435/435
(100 %)
0 diff
(100 %id)
DA998592 breast, tumor tissue .c 58 to 611 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CD709194 normal nasopharynx .c 60 to 604 18 to 562       545/562
(96 %)
7 diff
(98.8 %id)
BP223075   .c 60 to 662 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
BP287089 lung .c 60 to 641 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA163906 amygdala .c 61 to 637 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA371443 thalamus .c 61 to 590 2 to 531   capped   530/531
(99 %)
2 diff
(99.7 %id)
DA442931 tongue, tumor tissue .c 61 to 636 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA458220 tongue, tumor tissue .c 61 to 622 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA558081   .c 61 to 633 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA559243   .c 61 to 611 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA589296 lung .c 61 to 640 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA594055 lung .c 61 to 607 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA675703   .c 61 to 644 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA814680   .c 61 to 636 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
AU140112 placenta .c 61 to 768 2 to 711   capped   710/712
(99 %)
7 diff
(99.1 %id)
DA938970 Spleen .c 61 to 632 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA959335 Spleen .c 61 to 613 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA975490 synovial membrane tissue from rheumatioidarthritis .c 61 to 596 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB013207 esophageal, tumor tissue .c 61 to 593 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB210317 trachea .c 61 to 613 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB252105 uterus .c 61 to 646 2 to 587   capped   586/586
(100 %)
3 diff
(99.5 %id)
BM152245 leukopheresis .c 62 to 210 1 to 149       149/149
(100 %)
8 diff
(94.7 %id)
DA305506 hippocampus .c 64 to 514 11 to 462   capped   452/452
(100 %)
2 diff
(99.6 %id)
BQ440529 leiomyosarcoma, uterus .c 64 to 918 1 to 861   tiling clone,   861/864
(99 %)
6 diff
(99.4 %id)
BQ223467 melanotic melanoma, skin .c 65 to 795 1 to 740       740/927
(79 %)
21 diff
(97.8 %id)
BG339082 leiomyosarcoma cell line, uterus .c 66 to 871 1 to 797       797/947
(84 %)
21 diff
(97.8 %id)
CN334675 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 67 to 789 1 to 724       724/726
(99 %)
3 diff
(99.6 %id)
TI_43960580   .c 67 to 627 59 to 621       563/621
(90 %)
8 diff
(98.8 %id)
BE784823 large cell carcinoma, lung .c 70 to 794 1 to 733       733/751
(97 %)
28 diff
(96.3 %id)
BI489899 pooled brain, lung, testis .c 71 to 627 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
BU195412 leiomyosarcoma, uterus .c 74 to 739 1 to 673       673/805
(83 %)
12 diff
(98.6 %id)
BF797964 lymph, lymphoma, cell line .c 75 to 837 1 to 768       768/908
(84 %)
20 diff
(97.8 %id)
CF136361 lymph .c 77 to 509 8 to 440       433/440
(98 %)
4 diff
(99.1 %id)
TI_154165374   .c 77 to 605 81 to 608       528/528
(100 %)
9 diff
(98.3 %id)
AA367936 placenta .c 1418 to 1711 1 to 294       294/294
(100 %)
2 diff
(99.4 %id)
DB380804 placenta .c 4074 to 4359 287 to 1   tiling clone,   287/287
(100 %)
4 diff
(98.7 %id)
BP332605 renal proximal tubule .d 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
DA629465 Kidney .e 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
BI824142 pooled brain, lung, testis .f 1 to 758 2 to 761 exact tiling clone,   761/761
(100 %)
5 diff
(99.4 %id)
TI_57201327   .f 1 to 758 35 to 794 exact     761/794
(95 %)
11 diff
(98.7 %id)
CD685813 normal nasopharynx .g 1 to 600 23 to 623 K16E S17I Q18S K19E I20D ... tiling clone,   601/623
(96 %)
9 diff
(98.6 %id)
DA467742 cord Blood .g 2 to 564 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA203923 brain .g 15 to 586 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DB127782 thymus .g 15 to 514 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
CD691076 normal nasopharynx .g 16 to 516 23 to 523       501/523
(95 %)
14 diff
(97.4 %id)
AK310777 liver, tumor tissue .h 1 to 976 2 to 977 exact tiling clone,   977/977
(100 %)
1 diff
(99.9 %id)
DB182949 liver, tumor tissue .h 1 to 564 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
BP271131 small intestine .i 1 to 581 2 to 583   tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
BP283295 bone marrow .i 3 to 584 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA231037 brain .i 4 to 539 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DN994337 brain, whole brain .i 12 to 656 1 to 644       644/644
(100 %)
6 diff
(99.1 %id)
BP345718 synovial membrane .i 19 to 600 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
BP346406 synovial membrane .i 19 to 596 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DA384069 thalamus .i 20 to 567 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA892540 rectum .i 31 to 599 2 to 570   capped   569/570
(99 %)
1 diff
(99.9 %id)
BI910177 leukocyte .i 44 to 508 1 to 469       469/650
(72 %)
14 diff
(97.9 %id)
TI_57237024   .i 45 to 508 29 to 496       468/677
(69 %)
17 diff
(97.5 %id)
DA815612   .i 53 to 621 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
AB209906 aorta endothelial cell .i 90 to 5962 10 to 5882   tiling clone,   5873/5882
(99 %)
4 diff
(100.0 %id)
AW503667 lymph .i 393 to 880 1 to 488       488/488
(100 %)
4 diff
(99.2 %id)
BG546215 lung .i 1081 to 1806 725 to 1     Submitted on the opposite strand 725/725
(100 %)
4 diff
(99.5 %id)
T86216 liver and spleen .i 1154 to 1487 1 to 339   tiling clone,   339/423
(80 %)
6 diff
(98.6 %id)
T83316 liver and spleen .i 1199 to 1479 1 to 290       290/317
(91 %)
13 diff
(95.9 %id)
BG989200 head_neck .i 1714 to 2219 1 to 508       508/508
(100 %)
31 diff
(93.9 %id)
CN285706 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 2372 to 3077 1 to 706   tiling clone,   706/706
(100 %)
3 diff
(99.6 %id)
DA830704 placenta .i 2400 to 3081 2 to 693   capped   692/696
(99 %)
16 diff
(97.8 %id)
DB375996 placenta .i 3986 to 4421 436 to 1       436/439
(99 %)
0 diff
(100 %id)
AW610248 stomach .i 4791 to 5428 659 to 24       636/659
(96 %)
0 diff
(100 %id)
CF130371 Chondrosarcoma Lung Metastasis cell lines, lung .i 4806 to 5513 1 to 710   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 710/710
(100 %)
3 diff
(99.6 %id)
TI_154192340   .i 4806 to 5513 50 to 759   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 710/710
(100 %)
3 diff
(99.6 %id)
BE247106 leukopheresis .i 4810 to 5077 269 to 1       269/269
(100 %)
5 diff
(98.2 %id)
AA070079   .i 4878 to 5378 1 to 503   fully sequenced,   503/503
(100 %)
4 diff
(99.3 %id)
AI139181 uterus .i 4896 to 5071 176 to 1       176/176
(100 %)
0 diff
(100 %id)
AW363085 colon .i 4901 to 5459 560 to 14       547/571
(95 %)
0 diff
(100 %id)
AA832437 germinal center B cell .i 4911 to 5070 195 to 36   AAA   160/160
(100 %)
0 diff
(100 %id)
DW446869 Liver .i 4972 to 5170 17 to 215       199/215
(92 %)
6 diff
(97.3 %id)
AA588611 normal prostate, Prostate .i 5134 to 5520 386 to 1       386/386
(100 %)
3 diff
(99.3 %id)
AI762747 B-cell, chronic lymphotic leukemia .i 5299 to 5792 494 to 1       494/494
(100 %)
13 diff
(97.4 %id)
AW129666 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i 5350 to 5971 620 to 1       620/620
(100 %)
9 diff
(98.6 %id)
AA070649   .i 5364 to 5793 431 to 1   fully sequenced,   431/431
(100 %)
6 diff
(98.7 %id)
AI921880 2 pooled tumors (clear cell type), Kidney .i 5404 to 5956 562 to 10       553/562
(98 %)
0 diff
(100 %id)
AW002594 pooled germ cell tumors .i 5412 to 5785 373 to 1       373/381
(97 %)
4 diff
(99.0 %id)
TI_154134301   .i 5436 to 5983 622 to 72       551/855
(64 %)
0 diff
(100 %id)
AI633847 pooled germ cell tumors .i 5446 to 5785 340 to 1       340/340
(100 %)
8 diff
(97.7 %id)
AI638818 pooled germ cell tumors .i 5446 to 5785 340 to 1       340/340
(100 %)
4 diff
(98.9 %id)
AI654499 pooled germ cell tumors .i 5446 to 5785 340 to 1       340/340
(100 %)
9 diff
(97.4 %id)
AI962514 pooled germ cell tumors .i 5446 to 5785 351 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 340/340
(100 %)
4 diff
(98.9 %id)
AI962677 pooled germ cell tumors .i 5446 to 5787 344 to 3       342/344
(99 %)
0 diff
(100 %id)
AI962372 pooled germ cell tumors .i 5446 to 5785 341 to 1       341/341
(100 %)
5 diff
(98.6 %id)
AW236633 pooled germ cell tumors .i 5446 to 5785 340 to 1       340/340
(100 %)
4 diff
(98.9 %id)
AW590583 pooled germ cell tumors .i 5446 to 5785 340 to 1       340/340
(100 %)
4 diff
(98.9 %id)
AI761476 B-cell, chronic lymphotic leukemia .i 5459 to 5966 507 to 1       507/507
(100 %)
4 diff
(99.3 %id)
AW292580   .i 5459 to 5785 344 to 18   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 327/327
(100 %)
4 diff
(98.8 %id)
AA371330 Prostate .i 5466 to 5774 1 to 309       309/310
(99 %)
3 diff
(99.1 %id)
AI769558 2 pooled tumors (clear cell type), Kidney .i 5498 to 5962 468 to 4       465/468
(99 %)
0 diff
(100 %id)
BE856630 pooled .i 5526 to 5962 443 to 7       437/443
(98 %)
0 diff
(100 %id)
AA508217 Prostate .i 5532 to 5962 438 to 8       431/438
(98 %)
0 diff
(100 %id)
AI436407 B-cell, chronic lymphotic leukemia .i 5532 to 5962 432 to 2       431/432
(99 %)
0 diff
(100 %id)
AI066706 senescent fibroblast .i 5536 to 5962 433 to 7       427/433
(98 %)
0 diff
(100 %id)
AA670105 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i 5553 to 5946 1 to 394       394/394
(100 %)
0 diff
(100 %id)
AI659396 Prostate .i 5561 to 5792 232 to 1       232/232
(100 %)
0 diff
(100 %id)
BF221735 Prostate .i 5561 to 5792 232 to 1       232/232
(100 %)
0 diff
(100 %id)
AW576479 lymph .i 5565 to 5980 416 to 1   tiling clone,   416/416
(100 %)
0 diff
(100 %id)
AI458201 carcinoid, lung .i 5569 to 5791 223 to 1       223/223
(100 %)
0 diff
(100 %id)
AI581847 colon .i 5569 to 5962 394 to 1       394/394
(100 %)
0 diff
(100 %id)
FN123893 breast carcinoma .i 5590 to 5687 1 to 98       98/98
(100 %)
0 diff
(100 %id)
AI076440 liver and spleen .i 5590 to 5796 207 to 1       207/207
(100 %)
4 diff
(98.1 %id)
AI300128 2 pooled tumors (clear cell type), Kidney .i 5590 to 5962 376 to 4       373/376
(99 %)
0 diff
(100 %id)
AA761718 germinal center B cell .i 5618 to 5962 354 to 10       345/354
(97 %)
0 diff
(100 %id)
AI014900   .i 5622 to 5962 345 to 5       341/345
(98 %)
0 diff
(100 %id)
BI023897 marrow .i 5652 to 5953 12 to 315       304/315
(96 %)
6 diff
(98.1 %id)
GD144258   .i 5670 to 5961 1 to 293   AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 293/293
(100 %)
3 diff
(99.0 %id)
BM546054 ovary (pool of 3) .i 5677 to 6295 13 to 639       627/1238
(50 %)
24 diff
(98.1 %id)
BM546109 ovary (pool of 3) .i 5677 to 6654 20 to 1028       1009/1208
(83 %)
60 diff
(95.1 %id)
GD160796   .i 5678 to 5787 8 to 117       110/127
(86 %)
1 diff
(99.3 %id)
AI001039 breast .i 5700 to 5962 263 to 1       263/263
(100 %)
2 diff
(99.3 %id)
CN265142 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 5973 to 6559 1 to 587   tiling clone,   587/587
(100 %)
0 diff
(100 %id)
CD694159 normal nasopharynx .i 6064 to 6485 31 to 454       424/454
(93 %)
6 diff
(98.7 %id)
AI631749 Kidney .i 6080 to 6611 540 to 3       538/540
(99 %)
0 diff
(100 %id)
AW856156 colon .i 6093 to 6422 10 to 341       332/355
(93 %)
4 diff
(98.9 %id)
AI934544 2 pooled tumors (clear cell type), Kidney .i 6096 to 6592 509 to 15   AAA Possibly primed on the genome, locally A rich (19/20 A in genome downstream of last aligned base) 495/495
(100 %)
7 diff
(98.6 %id)
AW104952 pooled .i 6139 to 6602 467 to 3       465/467
(99 %)
0 diff
(100 %id)
BF111648 pooled .i 6151 to 6606 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
AW856251 colon .i 6154 to 6422 1 to 269       269/283
(95 %)
3 diff
(99.0 %id)
AI344363 2 pooled tumors (clear cell type), Kidney .i 6186 to 6607 423 to 2       422/423
(99 %)
0 diff
(100 %id)
BF753505 colon .i 6208 to 6669 466 to 6   tiling clone, Submitted on the opposite strand 461/466
(98 %)
0 diff
(100 %id)
BG413533 pooled .i 6233 to 6606 374 to 1       374/374
(100 %)
6 diff
(98.4 %id)
AW136933   .i 6435 to 6754 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AW205670   .i 6435 to 6592 183 to 26   AAA   158/169
(93 %)
0 diff
(100 %id)
BF747960 breast_normal .i 6494 to 6890 403 to 10     Submitted on the opposite strand 394/420
(93 %)
0 diff
(100 %id)
AW379774 head_neck .i 6556 to 6839 1 to 284   tiling clone,   284/284
(100 %)
2 diff
(99.3 %id)
DB131650 thymus .i 6572 to 7125 2 to 556   capped   555/555
(100 %)
6 diff
(99.0 %id)
AA621939 thyroid .i 6737 to 7155 18 to 435       418/435
(96 %)
10 diff
(97.8 %id)
BG505694 embryonal carcinoma, testis .i 6749 to 7243 1 to 500       500/784
(63 %)
20 diff
(97.5 %id)
AW969018   .i 6755 to 7234 480 to 1     Submitted on the opposite strand 480/592
(81 %)
4 diff
(99.4 %id)
CB163814 Liver .i 6789 to 7181 393 to 1     Submitted on the opposite strand 393/393
(100 %)
0 diff
(100 %id)
AI809831 B-cell, chronic lymphotic leukemia .i 6796 to 7238 443 to 1   tiling clone,   443/443
(100 %)
4 diff
(99.1 %id)
AA504361 germinal center B cell .i 6806 to 6926 1 to 121   fully sequenced,   121/121
(100 %)
0 diff
(100 %id)
AA502137 liposarcoma .i 6814 to 7179 1 to 367       367/386
(95 %)
8 diff
(98.0 %id)
AA780172   .i 6855 to 7227 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AA526633 ovary .i 6867 to 7186 319 to 1       319/323
(98 %)
4 diff
(98.8 %id)
AA504108 germinal center B cell .i 6896 to 7245 350 to 1   fully sequenced,   350/350
(100 %)
1 diff
(99.8 %id)
AI766388 Kidney .i 6941 to 7187 247 to 1       247/247
(100 %)
0 diff
(100 %id)
BX098407 carcinoid, lung .i 7165 to 7820 1 to 656   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 656/656
(100 %)
1 diff
(99.9 %id)
CA313906 Human Lung Epithelial cells, lung .i 7230 to 7820 609 to 19   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 591/591
(100 %)
7 diff
(98.9 %id)
TI_149307604   .i 7253 to 7998 826 to 92   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 735/967
(76 %)
16 diff
(98.4 %id)
AA215599 germinal center B cell .i 7281 to 7581 1 to 304       304/305
(99 %)
7 diff
(97.8 %id)
AA947944 carcinoid, lung .i 7330 to 7820 490 to 1       490/490
(100 %)
2 diff
(99.6 %id)
BM979357 lung, Primary Lung Epithelial Cells .i 7338 to 7998 673 to 19   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 655/655
(100 %)
7 diff
(99.0 %id)
AA973917 carcinoid, lung .i 7466 to 7820 355 to 1       355/355
(100 %)
9 diff
(97.5 %id)
BU618463 Cell Line, Chondrosarcoma .i 7690 to 8373 7 to 690   tiling clone, AAA Submitted on the opposite strand 684/690
(99 %)
17 diff
(97.6 %id)
AW850845 colon .i 7873 to 8376 6 to 511       506/511
(99 %)
6 diff
(98.9 %id)
BE144010 head_neck .i 7878 to 8372 9 to 504       496/504
(98 %)
6 diff
(98.9 %id)
AW855164 colon .i 8004 to 8572 17 to 583   tiling clone,   567/583
(97 %)
6 diff
(99.0 %id)
BF830708 head_neck .i 8248 to 8758 525 to 14   tiling clone, Submitted on the opposite strand 512/525
(97 %)
0 diff
(100 %id)
CR936707 fetal kidney .j 1 to 6801 1 to 6800 K6N tiling clone, AAA Possibly primed on the genome, locally A rich (19/20 A in genome downstream of last aligned base) 6800/6800
(100 %)
7 diff
(99.9 %id)
BP420455 small intestine .j 3026 to 3551 1 to 526     Submitted on the opposite strand 526/526
(100 %)
0 diff
(100 %id)
DA640032 Liver .j 3118 to 3642 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA846443 placenta .j 3124 to 3677 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
BX506999 Liver .j 3812 to 4532 1 to 721       721/721
(100 %)
2 diff
(99.8 %id)
CB148528 Liver .j 3942 to 4482 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BG958312 colon .j 3943 to 4413 479 to 10       470/479
(98 %)
0 diff
(100 %id)
W91951 liver and spleen .j 4175 to 4759 1 to 584   fully sequenced,   584/584
(100 %)
5 diff
(99.2 %id)
TI_227715659   .j 4301 to 5260 1018 to 86 C2V N3K V4K S5M K6L ... tiling clone, AAA   933/981
(95 %)
33 diff
(96.7 %id)
AW835476 leiomios .j 4391 to 4966 1 to 574       574/576
(99 %)
8 diff
(98.7 %id)
AW835473 leiomios .j 4396 to 4871 1 to 475       475/475
(100 %)
4 diff
(99.2 %id)
AW393590 stomach .j 4436 to 5086 668 to 18       651/668
(97 %)
5 diff
(99.3 %id)
CN334676 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 4444 to 5051 9 to 616       608/616
(98 %)
6 diff
(99.1 %id)
W91878 liver and spleen .j 4722 to 5261 557 to 2   fully sequenced,   556/557
(99 %)
0 diff
(100 %id)
BF972473 leiomyosarcoma cell line, uterus .k 1 to 599 1 to 613 R47S G48R K49N Q50T P51D ... tiling clone,   613/967
(63 %)
59 diff
(93.9 %id)
AA773705 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 1 to 450 1 to 449 exact tiling clone,   449/449
(100 %)
4 diff
(99.2 %id)
BX097459 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .m-u 1 to 446 460 to 15 G35D T38X tiling clone, AAA   446/446
(100 %)
1 diff
(99.8 %id)
AI701981 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .m-u 12 to 446 440 to 6   tiling clone,   435/440
(98 %)
0 diff
(100 %id)
DB312338 thalamus Gene TRIM38, variant not shown              
DA404610 thalamus Gene TRIM38, variant not shown       capped      
AI620484 Prostate Gene TRIM38, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CF143239 lymph Gene TRIM38, variant not shown              
BE675524 B-cell, chronic lymphotic leukemia Gene TRIM38, variant not shown         Suspected internal deletion, this clone was ignored    
BG530635 embryonal carcinoma, testis Gene TRIM38, variant not shown         This clone was ignored    
BQ082476 Ascites, stomach Gene TRIM38, variant not shown              
TI_149279097   Gene TRIM38, variant not shown       AAA      
TI_154174531   Gene TRIM38, variant not shown              
CA436623 Bone, Subchondral Bone Gene TRIM38, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BP379275 uterus Gene TRIM38, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI