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Gene TRAM1L1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
54 supporting clones for gene TRAM1L1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA197787 brain .a-u 1 to 564 6 to 569   tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
DA516175 brain .a-u 1 to 560 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
CR596564 adult brain .a-u 4 to 1932 1 to 1929 exact tiling clone,   1929/1929
(100 %)
0 diff
(100 %id)
BX423039 adult brain, brain .a-u 10 to 892 4 to 882   fully sequenced,   879/882
(99 %)
5 diff
(99.5 %id)
BJ991006 hepatoblastoma .a-u 79 to 598 1 to 520       520/520
(100 %)
3 diff
(99.5 %id)
TI_1948123361   .a-u 120 to 382 117 to 379   fully sequenced,   263/379
(69 %)
6 diff
(98.5 %id)
TI_1948123538   .a-u 120 to 618 124 to 622   fully sequenced,   499/622
(80 %)
6 diff
(99.1 %id)
TI_1948123711   .a-u 120 to 575 118 to 581   fully sequenced,   464/581
(79 %)
6 diff
(99.0 %id)
TI_1948123872   .a-u 120 to 622 119 to 631   fully sequenced,   513/631
(81 %)
6 diff
(99.1 %id)
CV024009 mixed .a-u 127 to 793 1 to 667       667/670
(99 %)
4 diff
(99.5 %id)
TI_1948123362   .a-u 352 to 1241 1005 to 118   fully sequenced,   888/1005
(88 %)
17 diff
(98.4 %id)
BE938736 testis_normal .a-u 389 to 715 10 to 334       325/334
(97 %)
6 diff
(98.3 %id)
BE938727 testis_normal .a-u 397 to 715 21 to 335       315/335
(94 %)
6 diff
(98.3 %id)
BE938743 testis_normal .a-u 398 to 715 14 to 331       318/331
(96 %)
6 diff
(98.2 %id)
TI_1948123712   .a-u 545 to 1242 806 to 114   fully sequenced,   693/806
(85 %)
8 diff
(99.1 %id)
TI_1948123539   .a-u 588 to 1242 761 to 119   fully sequenced,   643/761
(84 %)
8 diff
(99.0 %id)
TI_1948123873   .a-u 592 to 1241 773 to 123   fully sequenced,   651/773
(84 %)
6 diff
(99.3 %id)
BX423038 adult brain, brain .a-u 862 to 1932 1063 to 1   fully sequenced,   1063/1063
(100 %)
6 diff
(99.5 %id)
AW023347 cochlea, ear .a-u 904 to 1347 7 to 450       444/450
(98 %)
6 diff
(98.7 %id)
BX097238   .a-u 1014 to 1494 1 to 481       481/481
(100 %)
0 diff
(100 %id)
TI_154123746   .a-u 1101 to 1965 954 to 104   AAA   851/945
(90 %)
26 diff
(97.3 %id)
DB359152 whole embryo, mainly body .a-u 1132 to 1679 545 to 1       545/545
(100 %)
13 diff
(97.7 %id)
CD679598 eye, Trabecular meshwork .a-u 1296 to 1941 11 to 656       646/656
(98 %)
6 diff
(99.1 %id)
CA415689 Chondrosarcoma Cell line .a-u 1300 to 1965 678 to 12   AAA   667/667
(100 %)
2 diff
(99.8 %id)
AI335840 uterus .a-u 1304 to 1673 390 to 21   AAA   370/370
(100 %)
11 diff
(97.1 %id)
BJ991007 hepatoblastoma .a-u 1384 to 1863 480 to 1       480/480
(100 %)
1 diff
(99.8 %id)
AV725026 hypothalamus .a-u 1417 to 1899 1 to 483       483/483
(100 %)
0 diff
(100 %id)
AW078666 2 pooled high-grade transitional celltumors, genitourinary tract .a-u 1463 to 1958 496 to 1       496/496
(100 %)
0 diff
(100 %id)
DB550112 hippocampus .a-u 1482 to 1965 1 to 484   tiling clone, AAA Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
AI138349   .a-u 1486 to 1961 476 to 1       476/476
(100 %)
0 diff
(100 %id)
DB569159 hypothalamus .a-u 1494 to 1965 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
AA169554   .a-u 1497 to 1965 488 to 21   AAA   468/473
(98 %)
1 diff
(99.8 %id)
DB567613 hypothalamus .a-u 1500 to 1965 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
DB574234 hypothalamus .a-u 1513 to 1965 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
BM663681 eye, Retina Foveal and Macular .a-u 1540 to 1965 443 to 18   AAA   426/426
(100 %)
0 diff
(100 %id)
DB525993 testis .a-u 1547 to 1957 1 to 411     Submitted on the opposite strand 411/412
(99 %)
1 diff
(99.8 %id)
AW611506 Kidney .a-u 1641 to 1960 322 to 1       322/322
(100 %)
3 diff
(99.1 %id)
DB460587 testis Gene TRAM1L1, variant not shown              
DB481297 hippocampus Gene TRAM1L1, variant not shown              
DB498064 hypothalamus Gene TRAM1L1, variant not shown              
BC030831 Brain, hypothalamus Gene TRAM1L1, variant not shown       available from MGC, AAA      
DB503035 hypothalamus Gene TRAM1L1, variant not shown              
DA132065 alzheimer cortex Gene TRAM1L1, variant not shown       capped      
DA132806 alzheimer cortex Gene TRAM1L1, variant not shown       capped      
DA139923 alzheimer cortex Gene TRAM1L1, variant not shown       capped      
DB496589 hypothalamus Gene TRAM1L1, variant not shown              
AK074617 whole embryo, mainly body Gene TRAM1L1, variant not shown       available from FLJ,      
DA341400 substantia nigra Gene TRAM1L1, variant not shown       capped      
DA342443 substantia nigra Gene TRAM1L1, variant not shown       capped      
DA358560 subthalamic nucleus Gene TRAM1L1, variant not shown       capped      
DA365729 subthalamic nucleus Gene TRAM1L1, variant not shown       capped      
DA968349 stomach Gene TRAM1L1, variant not shown       capped      
DB270871 uterus Gene TRAM1L1, variant not shown       capped      
DA264637 caudate nucleus Gene TRAM1L1, variant not shown       capped      
DA202031 brain Gene TRAM1L1, variant not shown       capped      
DA151193 amygdala Gene TRAM1L1, variant not shown       capped      
DA154132 amygdala Gene TRAM1L1, variant not shown       capped      
BG714759 brain, hypothalamus Gene TRAM1L1, variant not shown              
NM_152402.2   Gene TRAM1L1, variant not shown       RefSeq, AAA      
DB099839 testis Gene TRAM1L1, variant not shown       capped      
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DC