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Gene TOPORSandDDX58TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
389 supporting clones for gene TOPORSandDDX58 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AU280552   .a -8 to 559 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DA110856 cerebellum .a 1 to 581 10 to 590   tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DA737832   .a 1 to 773 10 to 783   capped   782/783
(99 %)
5 diff
(99.4 %id)
DA784060 brain .a 1 to 452 10 to 465   capped   464/464
(100 %)
4 diff
(99.2 %id)
BP244314 Kidney .a 1 to 579 4 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP248117 Kidney .a 1 to 580 2 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA545697   .a 1 to 561 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA592372 lung .a 2 to 575 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA823021 pericardium .a 2 to 552 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BP281515 bone marrow .a 9 to 591 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP311118 brain .a 9 to 591 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP315182 mammary gland .a 9 to 590 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA110426 cerebellum .a 10 to 571 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA302938 hippocampus .a 10 to 485 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA309191 hippocampus .a 10 to 589 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA471998   .a 10 to 556 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA477031   .a 10 to 564 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA504025 brain .a 10 to 550 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA747376   .a 10 to 566 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA786267 brain .a 10 to 506 2 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
DA798756 brain .a 10 to 548 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA837863 placenta .a 10 to 555 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA473674   .a 11 to 438 2 to 429   capped   428/428
(100 %)
0 diff
(100 %id)
CN483437 eye .a 14 to 596 1 to 583       583/583
(100 %)
9 diff
(98.5 %id)
DA448293 tongue, tumor tissue .a 16 to 564 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BP312905 mammary gland .a 17 to 641 1 to 624       624/624
(100 %)
2 diff
(99.7 %id)
DA706289   .a 19 to 577 2 to 561   capped   560/560
(100 %)
5 diff
(99.2 %id)
DA657942   .a 21 to 593 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA446594 tongue, tumor tissue .a 22 to 596 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA648073   .a 22 to 564 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA780509 brain .a 25 to 590 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BC060884 Placenta, normal .a 27 to 4134 1 to 4101 A154T E517K N749D tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 4101/4103
(99 %)
16 diff
(99.7 %id)
CB959670 Human Placenta, placenta .a 27 to 679 28 to 692       665/828
(80 %)
25 diff
(97.0 %id)
BP332615 renal proximal tubule .a 27 to 608 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA670687   .a 39 to 630 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DB097088 testis .a 39 to 554 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
AB045732 Lung, Brain .a 40 to 3857 1 to 3818 exact     3818/3818
(100 %)
5 diff
(99.9 %id)
AF098300   .a 40 to 3303 1 to 3264 N257S F308S E922G R1040K     3264/3264
(100 %)
7 diff
(99.8 %id)
DA220501 brain .a 162 to 532 192 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA238762 brain .a 162 to 570 196 to 607   capped   606/606
(100 %)
4 diff
(99.4 %id)
BE397988.
matches multiple genes
Burkitt lymphoma, lymph, Lymph, Burkitt lymphoma .a 162 to 513 178 to 529   available from MGC, also hits gene SEPT9 529/529
(100 %)
7 diff
(98.7 %id)
NM_005802.3   .a 162 to 4138 192 to 4168 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 4168/4168
(100 %)
0 diff
(100 %id)
DB285819 uterus .a 162 to 528 182 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
CF995055 Human Placenta, placenta .a 179 to 924 28 to 782       755/854
(88 %)
30 diff
(96.5 %id)
DA794195 brain .a 221 to 800 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BI560215.
matches multiple genes
testis .a 225 to 798 1 to 580   available from MGC, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base), also hits gene LOC645323 580/943
(61 %)
20 diff
(97.9 %id)
TI_44348542   .a 227 to 798 128 to 705       578/1068
(54 %)
23 diff
(97.9 %id)
DA781344 brain .a 248 to 817 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA490476 brain .a 256 to 815 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA506558 brain .a 259 to 834 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BP278754   .a 260 to 842 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP278758   .a 260 to 847 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DA779447 brain .a 268 to 844 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
U82939   .a 309 to 3857 1 to 3549   tiling clone,   3549/3549
(100 %)
4 diff
(99.9 %id)
DA166126 amygdala .a 384 to 949 2 to 568   capped   567/568
(99 %)
2 diff
(99.7 %id)
BM825879 Ascites, stomach .a 495 to 866 1 to 372       372/372
(100 %)
0 diff
(100 %id)
DB114720 thymus .a 496 to 1052 2 to 559   capped   558/561
(99 %)
2 diff
(99.7 %id)
CB118537 Liver .a 570 to 1174 605 to 1     Submitted on the opposite strand 605/605
(100 %)
0 diff
(100 %id)
DN995970 breast cancer, Mammary gland (cancer tissue) .a 587 to 939 1 to 353       353/353
(100 %)
6 diff
(98.4 %id)
DA806179 brain .a 626 to 1179 2 to 557   capped   556/557
(99 %)
4 diff
(99.3 %id)
DA065016 cerebellum .a 832 to 1397 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BE242402 leukopheresis .a 964 to 1268 1 to 305       305/305
(100 %)
4 diff
(98.7 %id)
BP235279 coronary artery .a 965 to 1547 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
FN117546 breast carcinoma .a 994 to 1098 102 to 1     Submitted on the opposite strand 102/102
(100 %)
3 diff
(97.1 %id)
DB171891 kidney, tumor tissue .a 1056 to 1643 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
AW063790 thymus .a 1252 to 1514 1 to 263       263/263
(100 %)
1 diff
(99.7 %id)
DA597595   .a 1338 to 1884 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
CN293811 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1517 to 1825 1 to 309       309/309
(100 %)
0 diff
(100 %id)
BM988221 mixed .a 1596 to 2034 441 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 438/447
(97 %)
0 diff
(100 %id)
BE765531 nervous_tumor .a 1632 to 2013 84 to 465       382/472
(80 %)
1 diff
(99.8 %id)
AL709863 human skeletal muscle .a 1817 to 2481 1 to 665       665/669
(99 %)
8 diff
(98.9 %id)
BG979301 colon_normal .a 1819 to 2074 446 to 191       256/446
(57 %)
0 diff
(100 %id)
BJ993130 hepatoblastoma .a 1942 to 2541 1 to 600       600/600
(100 %)
0 diff
(100 %id)
CB115135 Liver .a 2029 to 2601 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
BE870081 adenocarcinoma, colon .a 2068 to 2661 1 to 598       598/598
(100 %)
8 diff
(98.7 %id)
BE835913 prostate_normal .a 2074 to 2248 182 to 8       175/193
(90 %)
0 diff
(100 %id)
BP221309 colon .a 2082 to 2651 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
BE772721 prostate_tumor .a 2085 to 2195 1 to 111       111/111
(100 %)
2 diff
(98.2 %id)
AA252431 germinal center B cell .a 2160 to 2609 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
AW273388 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2187 to 2804 618 to 1       618/618
(100 %)
4 diff
(99.4 %id)
DB370451   .a 2242 to 2804 559 to 1       559/559
(100 %)
8 diff
(98.6 %id)
BF337676 brain, glioblastoma with EGFR amplification .a 2250 to 3077 1 to 832       832/903
(92 %)
36 diff
(96.1 %id)
BM698850 eye, fetal eyes .a 2275 to 2822 1 to 546   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 546/546
(100 %)
4 diff
(99.3 %id)
FN144280 breast carcinoma .a 2277 to 2350 1 to 74       74/74
(100 %)
3 diff
(96.0 %id)
BX488738   .a 2321 to 2832 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
AI970873 Prostate .a 2357 to 2799 448 to 6       443/448
(98 %)
0 diff
(100 %id)
AA630529 lung .a 2378 to 2803 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
BM669635 eye, fetal eyes .a 2716 to 2807 103 to 14   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 90/103
(87 %)
0 diff
(100 %id)
AA251880 germinal center B cell .a 3510 to 3912 406 to 4       403/406
(99 %)
0 diff
(100 %id)
BJ993131 hepatoblastoma .a 3763 to 4103 341 to 1   tiling clone,   341/341
(100 %)
0 diff
(100 %id)
AB045733 lung .b 40 to 3662 1 to 3623 exact tiling clone,   3623/3623
(100 %)
5 diff
(99.9 %id)
DA941882 Spleen .b 162 to 548 176 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
AU137478 placenta .b 2219 to 2905 2 to 692   capped   691/695
(99 %)
12 diff
(98.3 %id)
CN293812 embryonic stem cells, cell lines H1, H7, andH9 .b 2231 to 2615 1 to 384   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 384/389
(98 %)
3 diff
(99.3 %id)
FN073486 breast carcinoma .b 2374 to 2450 1 to 76       76/76
(100 %)
3 diff
(96.1 %id)
BE762838 nervous_tumor .b 2397 to 2656 263 to 6       258/263
(98 %)
0 diff
(100 %id)
BG503575 embryonal carcinoma, testis .b 2444 to 3236 1 to 798       798/844
(94 %)
11 diff
(98.7 %id)
CX784442 human embryonic stem cells .b 2472 to 3284 1 to 813       813/813
(100 %)
1 diff
(99.9 %id)
BQ292160 amnion_normal .b 2499 to 3024 528 to 1       528/529
(99 %)
29 diff
(94.6 %id)
BE937987 testis_normal .b 2506 to 3040 561 to 28       534/561
(95 %)
0 diff
(100 %id)
AI902709 breast .b 2516 to 2881 1 to 366       366/366
(100 %)
6 diff
(98.4 %id)
BE960935 melanotic melanoma, high MDR, skin .b 2530 to 3194 1 to 665       665/667
(99 %)
18 diff
(97.4 %id)
AV752368 Pituitary .b 2624 to 3230 1 to 601       601/713
(84 %)
12 diff
(98.4 %id)
AA292388 ovarian tumor, ovary .b 2655 to 3107 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BG566590 Liver .b 2655 to 3234 1 to 583       583/1150
(50 %)
11 diff
(99.1 %id)
CR736945 ovarian tumor, ovary .b 2656 to 3401 1 to 746       746/746
(100 %)
0 diff
(100 %id)
FN174901 breast carcinoma .b 2684 to 2765 1 to 81       81/83
(97 %)
3 diff
(96.4 %id)
AW949239 prostate_tumor .b 2692 to 2810 126 to 4     Submitted on the opposite strand 123/131
(93 %)
0 diff
(100 %id)
BG291791 bladder, transitional cell papilloma, cell line .b 2718 to 3341 1 to 625       625/1070
(58 %)
13 diff
(98.8 %id)
BE769882 prostate_tumor .b 2741 to 3044 313 to 12       302/316
(95 %)
0 diff
(100 %id)
BP221786 colon .b 2810 to 3673 1 to 877       877/883
(99 %)
28 diff
(96.9 %id)
BE738175 brain, glioblastoma .b 2866 to 3452 1 to 572       572/836
(68 %)
16 diff
(98.1 %id)
AV645468 corresponding non cancerous liver tissue .b 2874 to 3271 1 to 398     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
AV645481 corresponding non cancerous liver tissue .b 2874 to 3271 1 to 398     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
AV645513 corresponding non cancerous liver tissue .b 2874 to 3522 1 to 651     Submitted on the opposite strand 651/660
(98 %)
4 diff
(99.4 %id)
TI_149272133   .b 2914 to 3700 838 to 58       781/1076
(72 %)
0 diff
(100 %id)
AA628154   .b 2964 to 3314 352 to 2       351/352
(99 %)
0 diff
(100 %id)
CD299368 Blood vessels - aorta, basilar and artery .b 2980 to 3595 1 to 626       626/779
(80 %)
21 diff
(97.4 %id)
BF693413 muscle (skeletal) .b 3034 to 3580 1 to 555       555/712
(77 %)
41 diff
(94.3 %id)
FN104365 breast carcinoma .b 3035 to 3089 55 to 1     Submitted on the opposite strand 55/62
(88 %)
0 diff
(100 %id)
CA422707 cell lines, Chondrosarcoma .b 3085 to 3682 617 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 599/599
(100 %)
1 diff
(99.9 %id)
AV716436   .b 3093 to 3707 1 to 615       615/615
(100 %)
4 diff
(99.4 %id)
BU674865 lung, Primary Lung Epithelial Cells .b 3114 to 3677 579 to 16   AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 564/564
(100 %)
1 diff
(99.9 %id)
BG506482 lung .b 3122 to 3717 1 to 609       609/877
(69 %)
43 diff
(95.1 %id)
BM463719 leiomyosarcoma, uterus .b 3147 to 3941 1 to 793   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 793/793
(100 %)
5 diff
(99.4 %id)
AW971581   .b 3165 to 3714 552 to 1     Submitted on the opposite strand 552/556
(99 %)
18 diff
(96.8 %id)
BQ007035 Chondrosarcoma, Left Pelvis .b 3221 to 3943 738 to 17   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 722/722
(100 %)
3 diff
(99.6 %id)
BE738741 brain, glioblastoma .b 3225 to 3870 672 to 20       653/927
(70 %)
0 diff
(100 %id)
BE042510 colon, moderately-differentiated adenocarcinoma .b 3243 to 3483 241 to 1       241/241
(100 %)
6 diff
(97.6 %id)
BF514841   .b 3246 to 3715 483 to 15   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 469/469
(100 %)
2 diff
(99.6 %id)
AV712580   .b 3253 to 3989 1 to 735   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 735/735
(100 %)
6 diff
(99.2 %id)
AA236712 ovarian tumor, ovary .b 3292 to 3676 384 to 1       384/388
(98 %)
4 diff
(99.0 %id)
BP388288 pancreatic islet .b 3303 to 3681 1 to 378     Submitted on the opposite strand 378/378
(100 %)
4 diff
(99.0 %id)
AI394595 B-cell, chronic lymphotic leukemia .b 3312 to 3702 401 to 11       391/401
(97 %)
0 diff
(100 %id)
AA890341 parathyroid gland, parathyroid tumor .b 3322 to 3717 401 to 5       397/401
(99 %)
0 diff
(100 %id)
AI382853 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3332 to 3674 344 to 1       344/344
(100 %)
2 diff
(99.5 %id)
AA767652 germinal center B cell .b 3334 to 3712 399 to 23   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 377/377
(100 %)
3 diff
(99.3 %id)
AI934577 2 pooled tumors (clear cell type), Kidney .b 3344 to 3931 590 to 1       590/590
(100 %)
5 diff
(99.2 %id)
BP296477   .b 3358 to 3942 1 to 584       584/584
(100 %)
4 diff
(99.4 %id)
AA679829   .b 3369 to 3715 373 to 27   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 347/347
(100 %)
0 diff
(100 %id)
DB376709 placenta .b 3413 to 3943 528 to 1   tiling clone,   528/561
(94 %)
11 diff
(98.1 %id)
D62843   .b 3426 to 3712 1 to 286       286/286
(100 %)
1 diff
(99.7 %id)
AW440647 Kidney .b 3427 to 3707 9 to 289   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 281/289
(97 %)
6 diff
(98.0 %id)
AW440693 Kidney .b 3427 to 3707 9 to 289   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 281/289
(97 %)
6 diff
(98.0 %id)
AA174207   .b 3460 to 3676 217 to 1       217/217
(100 %)
0 diff
(100 %id)
AW044316 thymus, pooled .b 3493 to 3940 455 to 8       448/455
(98 %)
0 diff
(100 %id)
BE504620 pooled germ cell tumors .b 3560 to 3937 378 to 1       378/378
(100 %)
7 diff
(98.2 %id)
AI440038 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 3704 to 3932 256 to 28   AAA   229/237
(96 %)
0 diff
(100 %id)
FN046282 breast carcinoma .b 3754 to 3830 77 to 1     Submitted on the opposite strand 77/78
(98 %)
0 diff
(100 %id)
BC107731 Testis, embryonal carcinoma .c 1 to 904 5 to 908   AAA   908/908
(100 %)
3 diff
(99.7 %id)
DB279641 uterus .c 1 to 548 2 to 550   tiling clone, capped   549/549
(100 %)
2 diff
(99.7 %id)
AF038963   .c 19 to 3066 1 to 3047 D580E AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 3047/3047
(100 %)
6 diff
(99.9 %id)
NM_014314.3   .c 19 to 4777 1 to 4759 exact RefSeq,   4759/4759
(100 %)
3 diff
(100.0 %id)
DA760422   .c 21 to 572 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DN998145 breast cancer, Mammary gland (cancer tissue) .c 27 to 702 10 to 685       676/685
(98 %)
6 diff
(99.2 %id)
DA014358 adrenal gland .c 28 to 585 2 to 563   capped   562/562
(100 %)
8 diff
(98.6 %id)
TI_1752769246   .c 67 to 1175 104 to 1199     Submitted on the opposite strand 1101/1258
(87 %)
24 diff
(98.1 %id)
TI_1752770852   .c 67 to 822 764 to 11       754/1274
(59 %)
1 diff
(100.0 %id)
BC132786 Brain, PCR rescued clones .c 71 to 4107 1 to 4037 exact tiling clone,   4037/4037
(100 %)
8 diff
(99.9 %id)
BC136610 Brain, PCR rescued clones .c 71 to 4107 1 to 4037 exact     4037/4037
(100 %)
8 diff
(99.9 %id)
N57864 liver and spleen .c 80 to 556 484 to 1       484/541
(89 %)
17 diff
(96.9 %id)
DB097557 testis .c 112 to 705 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
BP313604 mammary gland .c 119 to 700 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DB239174 trachea .c 120 to 713 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
DA327676 hippocampus .c 121 to 676 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
AL710134 human skeletal muscle .c 121 to 844 2 to 726       725/726
(99 %)
6 diff
(99.2 %id)
BP313979 mammary gland .c 121 to 702 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP314207 mammary gland .c 121 to 703 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP313535 mammary gland .c 131 to 710 1 to 580       580/582
(99 %)
2 diff
(99.7 %id)
BX361893   .c 132 to 931 1 to 805       805/817
(98 %)
19 diff
(97.7 %id)
AL710638 human skeletal muscle .c 145 to 525 1 to 381       381/381
(100 %)
2 diff
(99.5 %id)
AL710630 human skeletal muscle .c 147 to 496 1 to 350       350/350
(100 %)
2 diff
(99.5 %id)
AK315040 trachea .c 148 to 2954 1 to 2807 P229S L643*     2807/2807
(100 %)
3 diff
(99.9 %id)
AL710864 human skeletal muscle .c 148 to 969 1 to 824       824/826
(99 %)
9 diff
(99.0 %id)
BP235238 coronary artery .c 148 to 738 1 to 591       591/592
(99 %)
7 diff
(98.9 %id)
BP271368 small intestine .c 148 to 729 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP271391 small intestine .c 148 to 725 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
DA635836 Kidney .c 148 to 736 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA710876   .c 148 to 696 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA715413   .c 148 to 727 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP313311 mammary gland .c 148 to 730 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP314467 mammary gland .c 148 to 730 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA961891 Spleen .c 148 to 709 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA991412 synovial membrane tissue from rheumatioidarthritis .c 148 to 673 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
BP351825   .c 148 to 729 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB144402 thymus .c 148 to 672 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DB154768 thymus .c 148 to 713 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB239103 trachea .c 148 to 735 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB282830 uterus .c 148 to 695 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA450659 tongue, tumor tissue .c 149 to 721 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DA550407   .c 149 to 713 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA577584   .c 149 to 704 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA676041   .c 149 to 747 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
BP314095 mammary gland .c 149 to 730 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB095843 testis .c 149 to 709 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB187800 liver, tumor tissue .c 149 to 724 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB232054 trachea .c 149 to 746 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DB232130 trachea .c 149 to 741 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DB232157 trachea .c 149 to 746 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA882476   .c 150 to 702 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BP313359 mammary gland .c 151 to 733 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BM804735 ovary (pool of 3) .c 152 to 952 1 to 807       807/1006
(80 %)
10 diff
(99.1 %id)
DA649446   .c 152 to 670 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DA042274 bladder .c 168 to 730 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA723967   .c 178 to 653 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
BE925984 breast_normal .c 217 to 560 346 to 3       344/346
(99 %)
4 diff
(98.9 %id)
AW449575   .c 279 to 472 16 to 209     Submitted on the opposite strand 194/215
(90 %)
8 diff
(96.3 %id)
DA762411 tongue .c 308 to 890 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB016127 esophageal, tumor tissue .c 501 to 1064 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA413979 thalamus .c 503 to 1056 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA762640 tongue .c 504 to 1083 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP383041 ilea mucosa .c 556 to 1232 1 to 674       674/674
(100 %)
6 diff
(99.2 %id)
FN173473 breast carcinoma .c 742 to 816 73 to 1     Submitted on the opposite strand 73/78
(93 %)
2 diff
(97.5 %id)
DA757148   .c 742 to 1300 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BU166239 melanotic melanoma, skin .c 768 to 1529 1 to 766       766/931
(82 %)
11 diff
(98.9 %id)
TI_1752770846   .c 858 to 1921 1067 to 8       1060/1303
(81 %)
7 diff
(99.5 %id)
CB150537 cervix, Uterine .c 953 to 1513 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA543395   .c 960 to 1527 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BP285570 lung .c 1015 to 1595 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BF240308 bone marrow, from chronic myelogenous leukemia .c 1037 to 1678 1 to 645       645/698
(92 %)
27 diff
(96.2 %id)
BQ305159 breast .c 1047 to 1615 568 to 1       568/569
(99 %)
9 diff
(98.5 %id)
DB091967 testis .c 1212 to 1760 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA990252 synovial membrane tissue from rheumatioidarthritis .c 1234 to 1769 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BU431581 lymph .c 1239 to 1741 13 to 515       503/515
(97 %)
6 diff
(98.9 %id)
TI_154153497   .c 1239 to 1855 86 to 707       622/627
(99 %)
18 diff
(97.2 %id)
BE154025 head_neck .c 1286 to 1424 1 to 140       140/142
(98 %)
10 diff
(93.0 %id)
BM462986 melanotic melanoma, skin .c 1286 to 2194 1 to 907       907/1089
(83 %)
22 diff
(98.0 %id)
BE153742 head_neck .c 1295 to 1427 146 to 12     Submitted on the opposite strand 135/148
(91 %)
4 diff
(97.3 %id)
BE706574 head_neck .c 1295 to 1424 136 to 7       130/141
(92 %)
8 diff
(94.4 %id)
BE693301 breast .c 1297 to 1428 10 to 141       132/144
(91 %)
10 diff
(93.1 %id)
AK023661 placenta .c 1344 to 4369 1 to 3026   tiling clone, available from FLJ,   3026/3026
(100 %)
4 diff
(99.9 %id)
EB387823 eye, optic nerve .c 1345 to 2181 1 to 837       837/837
(100 %)
0 diff
(100 %id)
AU139094 placenta .c 1345 to 2040 2 to 702   capped   701/701
(100 %)
10 diff
(98.6 %id)
BE547913 cervical carcinoma cell line, cervix .c 1372 to 2100 1 to 731       732/841
(87 %)
26 diff
(97.0 %id)
BM152543 leukopheresis .c 1465 to 2036 1 to 574       574/575
(99 %)
4 diff
(99.4 %id)
DA115303 cerebellum .c 1660 to 2206 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
AA127167 colon, tumor .c 1712 to 2147 1 to 440       440/447
(98 %)
5 diff
(98.9 %id)
TI_1752770848   .c 1718 to 2804 1088 to 5       1084/1321
(82 %)
2 diff
(99.9 %id)
DB151047 thymus .c 1723 to 2300 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
AL137608 testis .c 1758 to 4369 1 to 2612   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2612/2612
(100 %)
5 diff
(99.9 %id)
BM837370 Ascites, stomach .c 1890 to 2469 1 to 580       580/580
(100 %)
0 diff
(100 %id)
AW474787 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1972 to 2418 447 to 1       447/448
(99 %)
33 diff
(92.7 %id)
BP290402 lung .c 2054 to 2633 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA951543 Spleen .c 2063 to 2636 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA674769   .c 2066 to 2644 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AI520921 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 2135 to 2421 287 to 1       287/287
(100 %)
0 diff
(100 %id)
FN093685 breast carcinoma .c 2172 to 2264 1 to 92       92/92
(100 %)
5 diff
(94.6 %id)
BG340301 leiomyosarcoma cell line, uterus .c 2187 to 2669 1 to 495       495/1002
(49 %)
30 diff
(97.1 %id)
DA824661 pericardium .c 2259 to 2829 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
CD299987 testis .c 2286 to 3117 1 to 835       835/871
(95 %)
4 diff
(99.6 %id)
BP344510 synovial membrane .c 2325 to 2834 1 to 511       511/583
(87 %)
13 diff
(97.8 %id)
AA295407 Pancreas .c 2346 to 2663 1 to 321       321/344
(93 %)
6 diff
(98.3 %id)
CA431982 cell lines, Chondrosarcoma .c 2445 to 3073 640 to 12       629/640
(98 %)
1 diff
(99.9 %id)
BX281447 leiomyosarcoma, uterus .c 2459 to 2963 1 to 505       505/505
(100 %)
1 diff
(99.9 %id)
BQ435430 leiomyosarcoma, uterus .c 2462 to 3331 1 to 873       873/878
(99 %)
10 diff
(98.9 %id)
DB168128 kidney, tumor tissue .c 2480 to 3074 2 to 597   capped   596/596
(100 %)
2 diff
(99.7 %id)
BM564469 blood, natural killer cells, cell line .c 2490 to 3141 1 to 658       658/1086
(60 %)
10 diff
(99.1 %id)
AW873045 adrenal gland, neuroblastoma .c 2511 to 3072 562 to 1       562/568
(98 %)
8 diff
(98.6 %id)
BF820817 kidney_tumor .c 2530 to 2790 268 to 10     Submitted on the opposite strand 259/269
(96 %)
3 diff
(98.9 %id)
DA431789 colon .c 2533 to 2993 2 to 462   capped   461/461
(100 %)
1 diff
(99.8 %id)
CF594078 Human Placenta, placenta .c 2546 to 3285 26 to 769       744/816
(91 %)
11 diff
(98.7 %id)
AA126958 colon, tumor .c 2635 to 3073 442 to 4       439/442
(99 %)
0 diff
(100 %id)
AI951292 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .c 2656 to 3073 423 to 6       418/425
(98 %)
0 diff
(100 %id)
AW999311 breast_normal .c 2679 to 2855 1 to 177       177/177
(100 %)
1 diff
(99.5 %id)
BE814299 breast_normal .c 2686 to 2998 1 to 313       313/313
(100 %)
8 diff
(97.5 %id)
AU157883 placenta .c 3825 to 4369 542 to 1       542/591
(91 %)
26 diff
(95.7 %id)
AK125989 testis .d 1 to 3258 2 to 3259 exact tiling clone, available from FLJ,   3259/3259
(100 %)
1 diff
(100.0 %id)
DB077994 testis .d 1 to 577 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB340666 testis .d 2742 to 3258 517 to 1       517/517
(100 %)
0 diff
(100 %id)
BX647917 skin endothel, primary cell culture .e 1 to 2138 2 to 2139   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2139/2139
(100 %)
1 diff
(100.0 %id)
BX504722   .e 1 to 571 2 to 572     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 572/572
(100 %)
1 diff
(99.9 %id)
BX504723   .e 1510 to 2155 648 to 5   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 644/648
(99 %)
0 diff
(100 %id)
AK301678 esophagus, tumor tissue .f 1 to 2122 1 to 2122 D438G tiling clone,   2122/2122
(100 %)
2 diff
(100.0 %id)
BI465021 testis .g 1 to 759 1 to 767   tiling clone, available from MGC,   767/778
(98 %)
44 diff
(94.4 %id)
BC070029 testis .g 6 to 4087 1 to 4083 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 4083/4083
(100 %)
7 diff
(99.9 %id)
DC394245 esophageal, tumor tissue .g 19 to 583 1 to 565   tiling clone,   565/565
(100 %)
0 diff
(100 %id)
BE884799.
matches multiple genes
leiomyosarcoma, uterus, Uterus, leiomyosarcoma .h 1 to 629 4 to 638 R6C E97D E170A K171D E172T ... tiling clone, available from MGC, also hits gene FTH1 638/638
(100 %)
15 diff
(97.7 %id)
BG532244 embryonal carcinoma, testis .i 1 to 750 2 to 760 T55H L56F L58S K59S F60S ... tiling clone,   762/828
(92 %)
19 diff
(97.8 %id)
DC363645   .j 1 to 565 1 to 565 exact tiling clone,   565/565
(100 %)
0 diff
(100 %id)
DA045758 bladder .k 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BP315342 mammary gland .l 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
BP201053 amygdala .m 1 to 582 2 to 583 S8G tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
BP351504   .m 21 to 609 1 to 580 A43G E44* tiling clone,   580/580
(100 %)
19 diff
(96.8 %id)
DA042037 bladder .n 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
AW438730 serous papillary carcinoma, high grade, 2pooled tumors, uterus .n 486 to 956 469 to 1   tiling clone,   469/469
(100 %)
3 diff
(99.4 %id)
DA394381 thalamus .o 1 to 593 2 to 594 R79W tiling clone, capped   593/593
(100 %)
1 diff
(99.9 %id)
DA506306 brain .o 1 to 564 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
BG180462 adenocarcinoma, cell line, Prostate .o 1 to 669 1 to 659 exact tiling clone,   659/983
(67 %)
17 diff
(98.3 %id)
DB134474 thymus .o 1 to 552 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DB237523 trachea .o 1 to 578 2 to 580 exact capped   579/579
(100 %)
1 diff
(99.9 %id)
DB291052 uterus .o 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DA788108 brain .o 2 to 291 2 to 292   capped   291/291
(100 %)
1 diff
(99.7 %id)
DA483819 brain .o 8 to 522 2 to 516 exact capped   515/515
(100 %)
2 diff
(99.7 %id)
BP363837 lung .o 9 to 590 1 to 581 exact     581/581
(100 %)
1 diff
(99.9 %id)
DA227957 brain .o 10 to 566 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
DA312581 hippocampus .o 10 to 556 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DA743129   .o 27 to 490 8 to 475 C69F capped   463/468
(98 %)
18 diff
(96.2 %id)
DR003655 hippocampus .o 162 to 632 191 to 660 exact tiling clone,   660/660
(100 %)
4 diff
(99.4 %id)
BF094289 uterus_tumor .p 1 to 318 93 to 412 E36G N37K K38* tiling clone,   320/412
(77 %)
11 diff
(97.4 %id)
BG569755 lung .q-u 1 to 633 1 to 639 L19W E20R V21C V22H L24I ... tiling clone,   639/734
(87 %)
35 diff
(95.3 %id)
DA112260 cerebellum .q-u 57 to 635 2 to 579   tiling clone, capped   578/578
(100 %)
10 diff
(98.3 %id)
AI807018 pooled .q-u 1295 to 1879 1 to 585   tiling clone, Submitted on the opposite strand 585/585
(100 %)
7 diff
(98.9 %id)
DA353467 substantia nigra .q-u 1383 to 1936 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA703678   .q-u 1387 to 1955 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
AI263384 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .q-u 1388 to 1786 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AW438973 serous papillary carcinoma, high grade, 2pooled tumors, uterus .q-u 1392 to 1906 527 to 1       527/562
(93 %)
35 diff
(93.8 %id)
AI478424 Kidney .q-u 1394 to 1785 392 to 1       392/392
(100 %)
2 diff
(99.5 %id)
AW044562 pooled .q-u 1394 to 1785 404 to 13   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 392/392
(100 %)
1 diff
(99.8 %id)
AI350993   .q-u 1443 to 1826 384 to 1       384/384
(100 %)
0 diff
(100 %id)
BP289051 lung .q-u 1543 to 2119 1 to 579       579/584
(99 %)
13 diff
(97.8 %id)
BP383372 ilea mucosa .q-u 1628 to 2189 1 to 564       564/564
(100 %)
4 diff
(99.3 %id)
FN063568 breast carcinoma .q-u 1672 to 1750 75 to 1     Submitted on the opposite strand 75/76
(98 %)
4 diff
(94.8 %id)
BE395366 endometrium, adenocarcinoma cell line, uterus .q-u 1672 to 2285 1 to 613       613/685
(89 %)
13 diff
(98.2 %id)
AU137551 placenta .q-u 1721 to 2418 2 to 702   tiling clone, capped   701/740
(94 %)
11 diff
(98.6 %id)
BP377106 uterus .q-u 1722 to 2305 1 to 582       582/582
(100 %)
12 diff
(98.0 %id)
FN046900 breast carcinoma .q-u 1839 to 1900 1 to 62       62/63
(98 %)
2 diff
(96.9 %id)
BG674957 skin .q-u 2162 to 2985 1 to 823   tiling clone,   823/826
(99 %)
16 diff
(98.1 %id)
AW297366   .q-u 2202 to 2642 1 to 441   AAA Submitted on the opposite strand 441/441
(100 %)
8 diff
(98.2 %id)
AI807789 pooled .q-u 2454 to 2856 403 to 1       403/403
(100 %)
1 diff
(99.8 %id)
BX111818 liver and spleen .q-u 2508 to 2984 1 to 477       477/483
(98 %)
3 diff
(99.4 %id)
H48882 liver and spleen .q-u 2514 to 2942 1 to 434       434/435
(99 %)
11 diff
(97.5 %id)
AI860936 anaplastic oligodendroglioma, brain .q-u 2522 to 3084 566 to 3       564/566
(99 %)
0 diff
(100 %id)
BF055055 pooled .q-u 2546 to 3076 531 to 1       531/531
(100 %)
0 diff
(100 %id)
BQ943200 sciatic nerve .q-u 2552 to 3437 1 to 893       893/902
(99 %)
27 diff
(97.1 %id)
TI_153990820   .q-u 2558 to 3001 539 to 96   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 444/455
(97 %)
1 diff
(99.8 %id)
AA133857 uterus .q-u 2564 to 2954 1 to 394     Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 394/394
(100 %)
7 diff
(98.3 %id)
DB376835 placenta .q-u 2564 to 3082 520 to 1       520/539
(96 %)
11 diff
(98.0 %id)
R13881 whole brain .q-u 2565 to 2667 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
W35110 heart .q-u 2566 to 2852 1 to 289   fully sequenced,   289/289
(100 %)
1 diff
(99.7 %id)
AW206733   .q-u 2600 to 3001 419 to 18   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 402/402
(100 %)
0 diff
(100 %id)
BE930782 placenta_normal .q-u 2603 to 3102 504 to 6       499/504
(99 %)
0 diff
(100 %id)
BE930853 placenta_normal .q-u 2617 to 3074 459 to 2       458/459
(99 %)
0 diff
(100 %id)
CB049548 Prostate .q-u 2642 to 3082 464 to 24   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 441/450
(98 %)
1 diff
(99.8 %id)
AI801182 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .q-u 2668 to 3082 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AA659802 normal prostate, Prostate .q-u 2677 to 3083 407 to 1       407/407
(100 %)
1 diff
(99.8 %id)
AA626115 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .q-u 2680 to 3077 398 to 1       398/398
(100 %)
0 diff
(100 %id)
CN275897 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .q-u 2699 to 3240 1 to 542   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
BF478061 Prostate .q-u 2738 to 3082 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
W23677 heart .q-u 2822 to 3085 268 to 1   fully sequenced,   268/268
(100 %)
3 diff
(98.9 %id)
AA506435 colon .q-u 2919 to 3076 158 to 1       158/158
(100 %)
0 diff
(100 %id)
DB299965 cerebellum .q-u 2925 to 3481 562 to 1       562/569
(98 %)
17 diff
(97.1 %id)
AI304317 adenocarcinoma, colon .q-u 2929 to 3486 558 to 1       558/558
(100 %)
2 diff
(99.7 %id)
AI394148 pooled .q-u 2964 to 3481 518 to 1       518/518
(100 %)
4 diff
(99.3 %id)
AI131366 heart .q-u 3027 to 3484 458 to 2   tiling clone,   457/458
(99 %)
0 diff
(100 %id)
FN068157 breast carcinoma .q-u 3036 to 3104 1 to 67       67/68
(98 %)
5 diff
(92.7 %id)
AI377403   .q-u 3038 to 3484 450 to 4       447/450
(99 %)
0 diff
(100 %id)
AI279884 placenta .q-u 3044 to 3484 445 to 5       441/445
(99 %)
0 diff
(100 %id)
AA862613 Kidney .q-u 3046 to 3487 445 to 4   tiling clone,   442/446
(99 %)
0 diff
(100 %id)
AI127181 heart .q-u 3046 to 3486 444 to 1       444/446
(99 %)
11 diff
(97.6 %id)
AW473660 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .q-u 3051 to 3487 441 to 4       438/441
(99 %)
0 diff
(100 %id)
AA133858 uterus .q-u 3057 to 3486 457 to 21   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 437/446
(97 %)
10 diff
(97.8 %id)
AI873664 serous papillary carcinoma, high grade, 2pooled tumors, uterus .q-u 3088 to 3445 358 to 1       358/358
(100 %)
0 diff
(100 %id)
AI784505 uterus .q-u 3130 to 3487 361 to 4       358/361
(99 %)
0 diff
(100 %id)
BI057902 placenta_normal .r 1 to 312 122 to 433   tiling clone,   312/433
(72 %)
8 diff
(98.2 %id)
BI057594 placenta_normal .r 244 to 604 381 to 30   tiling clone,   352/381
(92 %)
0 diff
(100 %id)
CV378767 placenta_normal .r 524 to 827 312 to 6   tiling clone, Submitted on the opposite strand 307/314
(97 %)
0 diff
(100 %id)
BI057867 placenta_normal .r 562 to 927 382 to 18 K2L G3* tiling clone,   366/382
(95 %)
18 diff
(95.3 %id)
DA319452 hippocampus .s 1 to 350 2 to 349   tiling clone, capped   348/348
(100 %)
1 diff
(99.8 %id)
DA110538 cerebellum .s 6 to 573 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
DA677635   .s 6 to 583 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA768454 brain .s 8 to 530 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA292545 hippocampus .s 13 to 583 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB087199 testis .s 67 to 634 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
DA092876 cerebellum .s 71 to 554 2 to 488   capped   487/487
(100 %)
3 diff
(99.4 %id)
DA242145 brain .s 73 to 535 2 to 464   capped   463/463
(100 %)
0 diff
(100 %id)
DB072219 testis .s 82 to 633 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA352850 substantia nigra .s 85 to 669 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
CF593957 Human Placenta, placenta .s 110 to 709 29 to 632   tiling clone,   604/859
(70 %)
45 diff
(94.8 %id)
BG723440 testis .s 134 to 734 1 to 608 K9N M10N D11G N12Q F13L ... tiling clone,   608/832
(73 %)
11 diff
(98.7 %id)
DB457656 testis .s 139 to 606 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BX952408   .t-u 1 to 556 1 to 556 exact tiling clone,   556/556
(100 %)
1 diff
(99.9 %id)
BF855969 prostate_normal .t-u 421 to 698 281 to 2   tiling clone, Submitted on the opposite strand 280/292
(95 %)
0 diff
(100 %id)
DB105123 thymus .u-u 1 to 545 2 to 548 E66* tiling clone, capped   547/547
(100 %)
3 diff
(99.5 %id)
DA620083   .u-u 108 to 665 2 to 561 E66* capped   560/560
(100 %)
3 diff
(99.5 %id)
DW443447 Liver .u-u 124 to 338 16 to 230       215/230
(93 %)
6 diff
(97.4 %id)
DB254411 uterus .u-u 134 to 683 2 to 551 exact tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
BE819251 breast_normal .va-u 1 to 385 1 to 388 L7Y H8T L9Y R11G F12S ... tiling clone,   388/388
(100 %)
11 diff
(97.2 %id)
AI074578 liver and spleen .va-u 147 to 576 454 to 25   tiling clone,   430/454
(94 %)
0 diff
(100 %id)
AA699403 liver and spleen .va-u 206 to 596 391 to 1   tiling clone,   391/391
(100 %)
8 diff
(98.0 %id)
AA682834 liver and spleen .va-u 305 to 576 273 to 2   tiling clone,   272/273
(99 %)
0 diff
(100 %id)
AA885936 Kidney .vb-u 1 to 359 1 to 359 exact tiling clone, Submitted on the opposite strand 359/359
(100 %)
0 diff
(100 %id)
BM146670 leukopheresis .vb-u 41 to 582 1 to 540   tiling clone,   540/541
(99 %)
9 diff
(98.4 %id)
DA963070 stomach .vc-u 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BG190472   .vc-u 290 to 579 1 to 290 exact tiling clone,   290/290
(100 %)
1 diff
(99.7 %id)
DB066323 testis .vd-u 1 to 485 2 to 490 exact tiling clone, capped   489/489
(100 %)
2 diff
(99.6 %id)
BE693300 breast .ve-u 1 to 432 1 to 433 T13N P14A Y15L S17Q R18Q ... tiling clone,   433/438
(98 %)
4 diff
(99.1 %id)
CV407256 breast .ve-u 85 to 429 1 to 346   tiling clone,   346/355
(97 %)
11 diff
(97.0 %id)
AA524943   .vf-u 1 to 339 1 to 339 exact tiling clone,   339/346
(97 %)
2 diff
(99.5 %id)
AW971351   .vf-u 4 to 339 112 to 447       336/508
(66 %)
1 diff
(99.9 %id)
BE242451 leukopheresis .vg 1 to 332 331 to 1 D9N N23Q A24L A25L L26W ... tiling clone,   331/331
(100 %)
5 diff
(98.5 %id)
BP315152 mammary gland Gene TOPORSandDDX58, variant not shown         Suspected internal deletion, this clone was ignored    
BF886019 testis_normal Gene TOPORSandDDX58, variant not shown         This clone was ignored    
BX390645   Gene TOPORSandDDX58, variant not shown         This clone was ignored    
BX404870 thymus Gene TOPORSandDDX58, variant not shown              
BX426027 thymus Gene TOPORSandDDX58, variant not shown              
BX436683 thymus Gene TOPORSandDDX58, variant not shown              
DA836185 placenta Gene TOPORSandDDX58, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB354744 whole embryo, mainly head Gene TOPORSandDDX58, variant not shown         This clone was ignored    
DA568250 whole embryo, mainly head Gene TOPORSandDDX58, variant not shown       capped This clone was ignored    
BP355149   Gene TOPORSandDDX58, variant not shown         This clone was ignored    
BI057743 placenta_normal Gene TOPORSandDDX58, variant not shown              
BX090654 liver and spleen Gene TOPORSandDDX58, variant not shown       AAA This clone was ignored    
CV378779 placenta_normal Gene TOPORSandDDX58, variant not shown         This clone was ignored    
DB309169 hippocampus Gene TOPORSandDDX58, variant not shown         This clone was ignored    
DA322254 hippocampus Gene TOPORSandDDX58, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q-u, .r, .s, .t-u, .u-u, .va-u, .vb-u, .vc-u, .vd-u, .ve-u, .vf-u, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI