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Gene TOX3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
93 supporting clones for gene TOX3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI269359 Kidney .a 1 to 573 1 to 573     Submitted on the opposite strand 573/573
(100 %)
10 diff
(98.3 %id)
AI244459 Kidney .a 1 to 324 1 to 324     Submitted on the opposite strand 324/324
(100 %)
2 diff
(99.4 %id)
AI832131 colon, colon tumor, RER+ .a 1 to 573 1 to 573     Submitted on the opposite strand 573/573
(100 %)
2 diff
(99.7 %id)
AI439130 Kidney .a 1 to 573 1 to 573     Submitted on the opposite strand 573/573
(100 %)
2 diff
(99.7 %id)
AI738411 colon, colon tumor, RER+ .a 1 to 573 1 to 573     Submitted on the opposite strand 573/573
(100 %)
1 diff
(99.9 %id)
AW028586 fibrotheoma, ovary .a 1 to 580 1 to 578     Submitted on the opposite strand 578/582
(99 %)
16 diff
(97.3 %id)
BE501808 Kidney .a 1 to 581 1 to 581   tiling clone, Submitted on the opposite strand 581/581
(100 %)
0 diff
(100 %id)
BF057577 fibrotheoma, ovary .a 1 to 573 1 to 573     Submitted on the opposite strand 573/573
(100 %)
1 diff
(99.9 %id)
NM_001080430.2   .a 1 to 3121 1 to 3121 exact RefSeq,   3121/3121
(100 %)
0 diff
(100 %id)
AI347147 colon, colon tumor, RER+ .a 19 to 620 1 to 602     Submitted on the opposite strand 602/602
(100 %)
2 diff
(99.7 %id)
BF590970 colon, colon tumor, RER+ .a 25 to 573 1 to 549     Submitted on the opposite strand 549/549
(100 %)
1 diff
(99.9 %id)
AW242697 Kidney .a 34 to 530 1 to 497     Submitted on the opposite strand 497/497
(100 %)
3 diff
(99.4 %id)
AA514394 colon .a 42 to 603 1 to 559     Submitted on the opposite strand 559/559
(100 %)
2 diff
(99.7 %id)
AI936898 anaplastic oligodendroglioma, brain .a 42 to 569 1 to 529     Submitted on the opposite strand 529/530
(99 %)
5 diff
(99.1 %id)
AW027766 Kidney .a 62 to 570 1 to 508     Submitted on the opposite strand 508/512
(99 %)
13 diff
(97.5 %id)
AA081901   .a 255 to 778 1 to 518       518/575
(90 %)
16 diff
(97.3 %id)
AA905814 pooled .a 259 to 417 1 to 160     Submitted on the opposite strand 160/160
(100 %)
2 diff
(98.8 %id)
AA999828 breast .a 259 to 414 1 to 157     Submitted on the opposite strand 157/157
(100 %)
4 diff
(97.5 %id)
AK027006   .a 266 to 3116 1 to 2856   tiling clone, available from FLJ, AAA   2856/2856
(100 %)
9 diff
(99.7 %id)
DA524558 brain .a 277 to 777 2 to 502   capped   501/501
(100 %)
2 diff
(99.7 %id)
BF062531 colon, colon tumor, RER+ .b 1 to 489 1 to 490   tiling clone, Submitted on the opposite strand 490/490
(100 %)
2 diff
(99.6 %id)
AI393079 B-cell, chronic lymphotic leukemia .b 17 to 403 1 to 387     Submitted on the opposite strand 387/387
(100 %)
0 diff
(100 %id)
AI739648 colon, colon tumor, RER+ .b 17 to 524 1 to 508   tiling clone, Submitted on the opposite strand 508/508
(100 %)
0 diff
(100 %id)
AI739255 colon, colon tumor, RER+ .b 17 to 427 1 to 411     Submitted on the opposite strand 411/411
(100 %)
1 diff
(99.8 %id)
AI739639 colon, colon tumor, RER+ .b 110 to 566 1 to 457     Submitted on the opposite strand 457/457
(100 %)
1 diff
(99.8 %id)
DA514138 brain .b 249 to 770 2 to 523   tiling clone, capped   522/522
(100 %)
0 diff
(100 %id)
DB316671 brain .b 2607 to 3111 506 to 1   tiling clone,   506/548
(92 %)
3 diff
(99.5 %id)
AK299202   .c 1 to 3122 2 to 3123 exact tiling clone,   3123/3123
(100 %)
0 diff
(100 %id)
NM_001146188.1   .c 1 to 3122 2 to 3123 exact RefSeq,   3123/3123
(100 %)
0 diff
(100 %id)
DA743586   .c 1 to 564 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA715465   .c 263 to 489 341 to 567   capped   227/566
(40 %)
0 diff
(100 %id)
CB158332 Liver .c 283 to 814 1 to 533       533/533
(100 %)
1 diff
(99.9 %id)
AA595253 Prostate, prostate tumor .c 332 to 903 572 to 1       572/572
(100 %)
6 diff
(99.0 %id)
CN338252 embryonic stem cells, cell lines H1, H7, andH9 .c 383 to 1020 1 to 638       638/639
(99 %)
3 diff
(99.6 %id)
AW157368 brain, frontal lobe .c 459 to 906 452 to 5       448/453
(98 %)
1 diff
(99.8 %id)
DN831479 pooled .c 563 to 893 1 to 327       327/327
(100 %)
14 diff
(95.8 %id)
N99765 lung .c 588 to 902 313 to 1     Submitted on the opposite strand 313/329
(95 %)
14 diff
(95.8 %id)
DA796092 brain .c 596 to 1141 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
CN425613 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 777 to 1315 70 to 610       541/610
(88 %)
8 diff
(98.7 %id)
DN831480 pooled .c 806 to 1116 308 to 1     Submitted on the opposite strand 311/308
(100 %)
10 diff
(96.8 %id)
DA785947 brain .c 821 to 1401 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
AW662663 colon, moderately-differentiated adenocarcinoma .c 828 to 903 76 to 1       76/76
(100 %)
0 diff
(100 %id)
AA226866 brain, neuroepithelial cells .c 851 to 1122 9 to 280       272/280
(97 %)
0 diff
(100 %id)
AA480225 colon .c 887 to 1076 190 to 1       190/190
(100 %)
4 diff
(97.9 %id)
U80736 brain .c 908 to 3117 1 to 2217       2217/2224
(99 %)
12 diff
(99.5 %id)
AU132512   .c 1036 to 1784 2 to 752   capped   751/751
(100 %)
5 diff
(99.4 %id)
AW602304 breast .c 1063 to 1461 1 to 399       399/399
(100 %)
1 diff
(99.8 %id)
FN091304 breast carcinoma .c 1073 to 1158 1 to 84       84/85
(98 %)
5 diff
(94.2 %id)
AK025084 colon .c 1282 to 3046 1 to 1770   available from FLJ, AAA   1770/1770
(100 %)
4 diff
(99.8 %id)
CN298711 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1396 to 2142 1 to 748       748/748
(100 %)
2 diff
(99.8 %id)
AW389850 stomach .c 1425 to 1929 1 to 507       507/507
(100 %)
8 diff
(98.5 %id)
AW389839 stomach .c 1531 to 2177 644 to 3       642/648
(99 %)
0 diff
(100 %id)
AA294837 Pancreas .c 1634 to 2025 1 to 397       397/397
(100 %)
8 diff
(98.0 %id)
AA386206 Pancreas .c 1634 to 1847 1 to 215       215/215
(100 %)
6 diff
(97.3 %id)
BQ362582 stomach .c 1665 to 2181 525 to 8       518/525
(98 %)
0 diff
(100 %id)
BG565824 Liver .c 1676 to 2193 1 to 525       525/629
(83 %)
20 diff
(96.9 %id)
AW389804 stomach .c 1712 to 2173 461 to 2       460/461
(99 %)
0 diff
(100 %id)
BE006093 breast_normal .c 1803 to 2348 1 to 548       548/548
(100 %)
14 diff
(97.5 %id)
AA367264 Pancreas .c 1979 to 2206 1 to 228       228/234
(97 %)
1 diff
(99.6 %id)
AA367468 Pancreas .c 1979 to 2202 1 to 224       224/224
(100 %)
0 diff
(100 %id)
AW960020   .c 1980 to 2625 1 to 645       645/683
(94 %)
14 diff
(98.0 %id)
BM823114 stomach .c 2043 to 2401 1 to 358       358/358
(100 %)
1 diff
(99.8 %id)
CN298710 embryonic stem cells, DMSO-treated H9 cellline .c 2067 to 2786 1 to 720       720/720
(100 %)
0 diff
(100 %id)
BQ631616 Pancreas, Purified pancreatic islet .c 2088 to 2684 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
CK902154 Pancreas, Purified pancreatic islet .c 2094 to 2618 1 to 525     Submitted on the opposite strand 525/561
(93 %)
1 diff
(99.9 %id)
BM825570 stomach .c 2099 to 2550 1 to 452       452/452
(100 %)
0 diff
(100 %id)
CR737089 breast .c 2142 to 2947 1 to 810       810/810
(100 %)
6 diff
(99.3 %id)
DA516824 brain .c 2151 to 2685 2 to 541   capped   540/540
(100 %)
3 diff
(99.5 %id)
AU154024   .c 2575 to 3122 550 to 1       550/552
(99 %)
6 diff
(99.0 %id)
AA227219 brain, neuroepithelial cells .c 2779 to 3051 273 to 1       273/273
(100 %)
0 diff
(100 %id)
CN298712 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 1 to 603 1 to 603 V40G tiling clone,   603/603
(100 %)
1 diff
(99.9 %id)
FN164518 breast carcinoma .d 524 to 617 96 to 6     Submitted on the opposite strand 91/96
(94 %)
0 diff
(100 %id)
H39709.
matches multiple genes
breast .d 526 to 814 1 to 291   tiling clone, also hits gene H2AFJ 291/291
(100 %)
2 diff
(99.4 %id)
DN949395.
matches multiple genes
breast .d 529 to 831 1 to 308   tiling clone, also hits gene LEP 308/308
(100 %)
7 diff
(97.8 %id)
DR760210 embryonic stem .d 747 to 1488 765 to 24   tiling clone, AAA Submitted on the opposite strand 742/742
(100 %)
0 diff
(100 %id)
CN425614 embryonic stem cells, cell lines H1, H7, andH9 .d 797 to 1484 13 to 693   AAA   681/693
(98 %)
4 diff
(99.5 %id)
BI492797 cochlea, ear .d 863 to 1489 645 to 19   AAA   627/627
(100 %)
0 diff
(100 %id)
CA773487.
matches multiple genes
Pancreas, Purified pancreatic islet .d 888 to 1488 601 to 1     also hits gene ABCA5 601/601
(100 %)
0 diff
(100 %id)
CK902155 Pancreas, Purified pancreatic islet .d 913 to 1490 591 to 9     Submitted on the opposite strand 583/591
(98 %)
0 diff
(100 %id)
BQ631338 Pancreas, Purified pancreatic islet .d 942 to 1490 558 to 5   tiling clone,   554/558
(99 %)
0 diff
(100 %id)
CA776993 Pancreas, Purified pancreatic islet .d 950 to 1488 539 to 1       539/539
(100 %)
0 diff
(100 %id)
DB364447   .d 981 to 1413 436 to 1       436/436
(100 %)
4 diff
(99.1 %id)
C06072   .d 1030 to 1418 399 to 5       395/467
(84 %)
0 diff
(100 %id)
AI274758 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 1074 to 1414 341 to 1       341/341
(100 %)
0 diff
(100 %id)
AI589250 adenocarcinoma, Pancreas .d 1085 to 1413 341 to 13   AAA   329/329
(100 %)
0 diff
(100 %id)
BF941947 sciatic nerve .d 1124 to 1490 372 to 6       367/372
(98 %)
0 diff
(100 %id)
DN949565.
matches multiple genes
breast .d 1162 to 1484 378 to 52   AAA also hits gene LEP 327/327
(100 %)
7 diff
(97.9 %id)
AI470584 Kidney .d 1169 to 1485 323 to 6       318/323
(98 %)
0 diff
(100 %id)
BM788895 stomach .d 1314 to 1490 1 to 177       177/218
(81 %)
4 diff
(98.2 %id)
DA776585 brain .e 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
AK095095 hippocampus .f 1 to 3413 2 to 3415   tiling clone, available from FLJ,   3415/3415
(100 %)
5 diff
(99.9 %id)
DA308883 hippocampus .f 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BF328622 breast_normal .f 99 to 262 166 to 2       165/166
(99 %)
0 diff
(100 %id)
BF328659 breast_normal .f 99 to 262 165 to 2       164/165
(99 %)
0 diff
(100 %id)
DA497557 brain .f 410 to 979 2 to 571   tiling clone, capped   570/571
(99 %)
2 diff
(99.7 %id)
DB308382 hippocampus .f 2882 to 3413 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
BF591170 colon, colon tumor, RER+ .g 1 to 548 1 to 548 exact tiling clone, Submitted on the opposite strand 548/548
(100 %)
0 diff
(100 %id)
DA624572 Kidney Gene TOX3, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC