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Gene TRIM67TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
60 supporting clones for gene TRIM67 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001004342.3   .a 1 to 8521 2 to 8522 exact RefSeq,   8522/8522
(100 %)
0 diff
(100 %id)
DA124937 cerebellum .a 1 to 308 2 to 309   tiling clone, capped   308/308
(100 %)
1 diff
(99.7 %id)
TI_813709333   .a 974 to 1723 9 to 752   tiling clone,   744/1000
(74 %)
21 diff
(97.9 %id)
DN831666 pooled .a 985 to 1579 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
BG396890 eye, retinoblastoma .a 1406 to 1986 100 to 682       583/682
(85 %)
4 diff
(99.5 %id)
CR747849 eye, retinoblastoma .a 1407 to 1897 1 to 491   tiling clone,   491/491
(100 %)
0 diff
(100 %id)
TI_813709123   .a 1627 to 2364 5 to 744   tiling clone,   740/849
(87 %)
19 diff
(97.8 %id)
DN831135 pooled .a 1653 to 2345 1 to 693   tiling clone,   693/693
(100 %)
2 diff
(99.8 %id)
DN930500 pooled .a 1653 to 2343 1 to 691       691/692
(99 %)
4 diff
(99.5 %id)
DN930501 pooled .a 1687 to 2222 536 to 1     Submitted on the opposite strand 536/536
(100 %)
1 diff
(99.9 %id)
BF927548 nervous_tumor .a 2458 to 2687 1 to 230   tiling clone,   230/232
(99 %)
3 diff
(98.8 %id)
CR747893 brain, glioblastoma (pooled) .a 2619 to 3419 1 to 801   tiling clone,   801/801
(100 %)
6 diff
(99.3 %id)
T06346   .a 2668 to 3049 386 to 1       386/386
(100 %)
9 diff
(97.7 %id)
AI971890 fibrotheoma, ovary .a 2898 to 3346 1 to 449     Submitted on the opposite strand 449/449
(100 %)
1 diff
(99.8 %id)
AI939322 brain, glioblastoma (pooled) .a 3435 to 3908 484 to 11   tiling clone,   474/484
(97 %)
0 diff
(100 %id)
AI097404 brain, glioblastoma (pooled) .a 3442 to 3922 482 to 2       481/482
(99 %)
0 diff
(100 %id)
AI097405 brain, glioblastoma (pooled) .a 3442 to 3919 480 to 3       478/480
(99 %)
0 diff
(100 %id)
AI499723 anaplastic oligodendroglioma, brain .a 3606 to 3976 396 to 26   tiling clone, AAA   371/371
(100 %)
6 diff
(98.4 %id)
DA501178 brain .a 4611 to 5174 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA794497 brain .a 4704 to 5168 2 to 466   capped   465/465
(100 %)
2 diff
(99.6 %id)
AK055338 brain .a 4962 to 8507 1 to 3546   tiling clone, available from FLJ,   3546/3546
(100 %)
12 diff
(99.7 %id)
DA513438 brain .a 4963 to 5514 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA533401 brain .a 5040 to 5625 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA112920 cerebellum .a 5106 to 5640 2 to 536   tiling clone, capped   535/536
(99 %)
2 diff
(99.7 %id)
DA802355 brain .a 5256 to 5808 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA401486 thalamus .a 5288 to 5826 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA796406 brain .a 5369 to 5844 2 to 477   capped   476/479
(99 %)
2 diff
(99.6 %id)
DA778550 brain .a 5390 to 5962 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BG913053 anaplastic oligodendroglioma with 1p/19qloss, brain .a 5507 to 6311 1 to 801       801/802
(99 %)
8 diff
(99.1 %id)
BG819567 anaplastic oligodendroglioma with 1p/19qloss, brain .a 5522 to 6186 1 to 667       667/803
(83 %)
6 diff
(99.3 %id)
DA777522 brain .a 5553 to 6136 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA777553 brain .a 5553 to 5844 2 to 294   capped   293/293
(100 %)
3 diff
(99.0 %id)
CR627464 brain .a 5759 to 7041 13 to 1295   available from DKFZ, AAA   1283/1295
(99 %)
9 diff
(99.4 %id)
TI_57239932   .a 5823 to 6557 64 to 793       730/793
(92 %)
6 diff
(99.3 %id)
BI916399 brain .a 5824 to 6557 1 to 729       729/729
(100 %)
10 diff
(98.7 %id)
DR003233 fetal brain .a 5850 to 6325 9 to 485       477/485
(98 %)
6 diff
(98.8 %id)
DA522973 brain .a 5930 to 6502 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA519689 brain .a 5931 to 6497 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA518526 brain .a 6006 to 6559 2 to 555   tiling clone, capped   554/556
(99 %)
1 diff
(99.9 %id)
DA517257 brain .a 6098 to 6644 2 to 548   capped   547/548
(99 %)
2 diff
(99.7 %id)
TI_57242615   .a 6269 to 7040 59 to 830       772/830
(93 %)
16 diff
(98.1 %id)
BI918017 brain .a 6279 to 7040 1 to 762       762/762
(100 %)
11 diff
(98.6 %id)
BG912514 anaplastic oligodendroglioma with 1p/19qloss, brain .a 6310 to 6801 1 to 504       504/505
(99 %)
25 diff
(95.1 %id)
H15305 whole brain .a 6707 to 7124 1 to 423       423/434
(97 %)
6 diff
(98.7 %id)
AU252630 neuroblastoma .a 6763 to 7320 1 to 560       560/560
(100 %)
7 diff
(98.8 %id)
Z46076 brain, total brain .a 6784 to 7093 1 to 310       310/310
(100 %)
1 diff
(99.7 %id)
D56203   .a 6906 to 7234 1 to 329       329/329
(100 %)
0 diff
(100 %id)
Z45922 brain, total brain .a 7051 to 7312 10 to 271   tiling clone,   262/271
(96 %)
6 diff
(97.8 %id)
N45954.
matches multiple genes
melanocyte .a 7109 to 7541 1 to 442     also hits gene UTRN 442/443
(99 %)
9 diff
(98.0 %id)
Z44872 brain, total brain .a 7174 to 7384 1 to 211       211/211
(100 %)
3 diff
(98.6 %id)
BM698270 eye, fetal eyes .a 7270 to 7640 1 to 371       371/371
(100 %)
0 diff
(100 %id)
AA084071   .a 7640 to 8028 1 to 394   tiling clone,   394/394
(100 %)
5 diff
(98.8 %id)
AU252494 neuroblastoma .a 7838 to 8482 697 to 52       646/700
(92 %)
0 diff
(100 %id)
N36794.
matches multiple genes
melanocyte .a 7849 to 8518 670 to 5     also hits gene ZNF512andGPN1 666/670
(99 %)
0 diff
(100 %id)
AA340344 brain .a 7867 to 8215 1 to 349       349/349
(100 %)
2 diff
(99.5 %id)
DB300754 cerebellum .a 7953 to 8521 568 to 1   tiling clone,   568/569
(99 %)
14 diff
(97.6 %id)
DB317138 brain .a 7970 to 8507 540 to 1       540/540
(100 %)
5 diff
(99.1 %id)
DB316608 brain .a 7976 to 8507 534 to 1       534/534
(100 %)
3 diff
(99.5 %id)
BM667560 eye, fetal eyes .a 8209 to 8513 323 to 19   AAA   305/305
(100 %)
1 diff
(99.7 %id)
AW297595   .a 8217 to 8507 308 to 18   AAA   291/291
(100 %)
0 diff
(100 %id)
Z40641 brain, total brain .a 8246 to 8510 265 to 1       265/267
(99 %)
0 diff
(100 %id)
F04781 brain, total brain .a 8258 to 8507 250 to 1       250/260
(96 %)
0 diff
(100 %id)
T03906   .a 8262 to 8509 249 to 2       248/249
(99 %)
0 diff
(100 %id)
AI424633 brain, glioblastoma (pooled) .a 8308 to 8511 206 to 3       204/206
(99 %)
0 diff
(100 %id)
AY253917   .b 1 to 2166 1 to 2166 exact tiling clone,   2166/2166
(100 %)
0 diff
(100 %id)
AK126782 cerebellum Gene TRIM67, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C