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Gene CD70TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
50 supporting clones for gene CD70 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ944266 carcinoma, cell line, Prostate .a 1 to 858 1 to 870 N192D C195W E202G V206G N207K ... tiling clone,   870/937
(92 %)
22 diff
(97.7 %id)
BE786564 large cell carcinoma, lung .a 12 to 334 1 to 324       324/334
(97 %)
7 diff
(98.0 %id)
AK298467   .a 26 to 940 1 to 915 exact tiling clone,   915/915
(100 %)
1 diff
(99.9 %id)
DA643901   .a 27 to 614 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA643284   .a 31 to 569 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BG420391 Kidney, renal cell adenocarcinoma .a 44 to 284 1 to 240       240/240
(100 %)
2 diff
(99.2 %id)
BE273639 Kidney, renal cell adenocarcinoma .a 61 to 264 1 to 204       204/204
(100 %)
0 diff
(100 %id)
BM850868 stomach .a 101 to 459 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
CS075584   .b 1 to 913 1 to 913 exact tiling clone,   913/916
(99 %)
2 diff
(99.8 %id)
L08096   .b 1 to 912 1 to 913 A154V tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 913/913
(100 %)
5 diff
(99.5 %id)
NM_001252.3   .b 1 to 913 1 to 913 exact RefSeq,   913/913
(100 %)
0 diff
(100 %id)
BG775537 carcinoma, cell line, Prostate .b 11 to 297 1 to 287       287/287
(100 %)
1 diff
(99.7 %id)
BM046816 carcinoma, cell line, Prostate .b 11 to 297 1 to 287       287/287
(100 %)
1 diff
(99.7 %id)
BG421005 Kidney, renal cell adenocarcinoma .b 14 to 297 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
BG751344 eye, normal pigmented retinal epithelium .b 14 to 297 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
BG752420 eye, normal pigmented retinal epithelium .b 14 to 297 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
S69339   .b 14 to 901 1 to 888 exact     888/888
(100 %)
1 diff
(99.9 %id)
BQ933186 large cell carcinoma, lung .b 20 to 824 1 to 804 exact     804/951
(84 %)
4 diff
(99.6 %id)
AW732471 Kidney, renal cell adenocarcinoma .b 23 to 200 1 to 180       180/184
(97 %)
5 diff
(97.3 %id)
BQ049765 lymph, lymphoma, cell line .b 23 to 833 1 to 817 exact     817/1040
(78 %)
12 diff
(98.9 %id)
BF032685 adenocarcinoma, ovary .b 35 to 637 1 to 604       604/613
(98 %)
11 diff
(98.3 %id)
BE908993 epithelioid carcinoma, Pancreas .b 35 to 803 1 to 763 V130W G131E I132S C133A S134L ...     763/776
(98 %)
18 diff
(97.7 %id)
BM477559 lymph, lymphoma, cell line .b 36 to 834 1 to 802 exact     802/1073
(74 %)
9 diff
(99.2 %id)
BQ677350 melanotic melanoma, cell line, skin .b 37 to 830 1 to 795 exact     795/965
(82 %)
6 diff
(99.4 %id)
BM464627 lymph, lymphoma, cell line .b 38 to 829 1 to 795 T166P R179Q N180T T181L D182M ...     795/1133
(70 %)
61 diff
(94.7 %id)
BG170786 hypernephroma, cell line, Kidney .b 53 to 698 1 to 646       646/646
(100 %)
1 diff
(99.9 %id)
BC000725 Kidney, renal cell adenocarcinoma .b 55 to 896 1 to 842 exact available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 842/842
(100 %)
2 diff
(99.8 %id)
CR626341 B cells (Ramos cell line) Cot 25-normalized .b 102 to 913 1 to 812 exact tiling clone,   812/812
(100 %)
0 diff
(100 %id)
AL560676 B cells from Burkitt lymphoma .b 103 to 913 1 to 811 G29R V31A I32* fully sequenced,   811/811
(100 %)
6 diff
(99.3 %id)
BU540977 epithelioid carcinoma cell line, Pancreas .b 120 to 839 1 to 720 exact     720/893
(80 %)
9 diff
(99.0 %id)
BT007211   .b 151 to 730 1 to 580       580/582
(99 %)
2 diff
(99.7 %id)
BQ018045 Fibrosarcoma .b 242 to 913 673 to 2       672/673
(99 %)
0 diff
(100 %id)
BG616358 embryonal carcinoma, testis .b 273 to 912 1 to 641   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 641/641
(100 %)
16 diff
(97.6 %id)
BM852184 stomach .b 307 to 746 1 to 440       440/440
(100 %)
3 diff
(99.4 %id)
AL560675 B cells from Burkitt lymphoma .b 315 to 879 571 to 1   fully sequenced,   571/571
(100 %)
10 diff
(98.3 %id)
BG168391 hypernephroma, cell line, Kidney .b 381 to 908 1 to 531       531/534
(99 %)
13 diff
(97.6 %id)
AA860136   .b 432 to 913 480 to 3       478/480
(99 %)
0 diff
(100 %id)
AW294237   .b 513 to 795 293 to 11       283/293
(96 %)
0 diff
(100 %id)
AA769742 2 pooled tumors (clear cell type), Kidney .b 580 to 692 113 to 1       113/113
(100 %)
3 diff
(97.4 %id)
AI821969 2 pooled tumors (clear cell type), Kidney .b 581 to 863 337 to 53   AAA   285/318
(89 %)
0 diff
(100 %id)
BM920015 pooled pancreas and spleen .b 610 to 912 1 to 304   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 304/304
(100 %)
2 diff
(99.4 %id)
BQ227452 large cell carcinoma, lung .b 667 to 896 11 to 241   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 231/241
(95 %)
6 diff
(97.6 %id)
CA438940 lung, Lung Focal Fibrosis .b 761 to 912 5 to 155   AAA Submitted on the opposite strand 151/155
(97 %)
6 diff
(96.2 %id)
BP332279 renal proximal tubule .c 1 to 581 1 to 581 exact tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
BU540451 large cell carcinoma, lung .d 1 to 679 1 to 679 exact tiling clone,   679/946
(71 %)
1 diff
(99.9 %id)
BF810426 colon_ins .e-u 1 to 262 275 to 14   tiling clone, Submitted on the opposite strand 262/279
(93 %)
0 diff
(100 %id)
BG166802 hypernephroma, cell line, Kidney .e-u 61 to 463 13 to 416   tiling clone,   404/416
(97 %)
6 diff
(98.6 %id)
BX117077 2 pooled tumors (clear cell type), Kidney Gene CD70, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI347622 2 pooled tumors (clear cell type), Kidney Gene CD70, variant not shown         Suspected internal deletion, this clone was ignored    
AI419481 brain, glioblastoma (pooled) Gene CD70, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BE207862 Kidney, renal cell adenocarcinoma Gene CD70, variant not shown         This clone was ignored    
AW732478 Kidney, renal cell adenocarcinoma Gene CD70, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI