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Gene CD40TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
175 supporting clones for gene CD40 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CA487488   .a 1 to 686 84 to 770       687/1049
(65 %)
16 diff
(98.5 %id)
BX641801   .a 3 to 591 1 to 589   tiling clone,   589/589
(100 %)
2 diff
(99.7 %id)
NM_001250.4   .a 7 to 1622 1 to 1616   RefSeq,   1616/1616
(100 %)
0 diff
(100 %id)
BE908916 epithelioid carcinoma, Pancreas .a 12 to 606 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
BI910333 leukocyte .a 13 to 665 1 to 654       654/658
(99 %)
16 diff
(97.6 %id)
TI_57236211   .a 13 to 665 31 to 684       654/688
(95 %)
21 diff
(97.0 %id)
BG700527 brain, hippocampus .a 21 to 792 1 to 774       772/775
(99 %)
22 diff
(97.2 %id)
BC012419 Ovary, adenocarcinoma .a 27 to 1168 1 to 1142   available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1142/1142
(100 %)
0 diff
(100 %id)
BX381149 Placenta Cot 25-normalized .a 33 to 1108 1 to 1070       1070/1070
(100 %)
48 diff
(95.6 %id)
X60592   .a 37 to 995 1 to 959       959/1004
(95 %)
4 diff
(99.7 %id)
CR605787 Placenta Cot 25-normalized .a 38 to 1507 1 to 1470   tiling clone,   1470/1470
(100 %)
0 diff
(100 %id)
BX381481 Placenta Cot 25-normalized .a 38 to 673 1 to 636   fully sequenced,   636/636
(100 %)
1 diff
(99.9 %id)
BE874141 large cell carcinoma, undifferentiated, lung .a 38 to 696 1 to 655       655/814
(80 %)
9 diff
(98.9 %id)
BM453397 melanotic melanoma, skin .a 38 to 880 1 to 853       853/862
(98 %)
17 diff
(98.1 %id)
CD673051 eye, Iris .a 47 to 699 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
BF032564 adenocarcinoma, ovary .a 48 to 734 1 to 685       683/727
(93 %)
12 diff
(98.4 %id)
BU600446 mixed (pool of 40 RNAs) .a 52 to 726 1 to 678       678/851
(79 %)
15 diff
(98.3 %id)
AK222896 Kidney .a 54 to 1392 1 to 1339   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1339/1340
(99 %)
3 diff
(99.8 %id)
BM925886 brain .a 57 to 994 16 to 969       954/1127
(84 %)
42 diff
(96.3 %id)
DN997906 breast cancer, Mammary gland (cancer tissue) .a 63 to 734 9 to 679       671/679
(98 %)
6 diff
(99.2 %id)
BI909300 leukocyte .a 64 to 763 1 to 699       699/699
(100 %)
2 diff
(99.8 %id)
TI_57235364   .a 65 to 763 31 to 728       698/728
(95 %)
6 diff
(99.2 %id)
TI_154185636   .a 66 to 759 111 to 801       691/982
(70 %)
12 diff
(98.8 %id)
BF797641 lymph, lymphoma, cell line .a 80 to 885 1 to 798       799/850
(94 %)
25 diff
(97.1 %id)
BF797570 lymph, lymphoma, cell line .a 80 to 822 1 to 747       747/820
(91 %)
11 diff
(98.7 %id)
AY225405   .a 84 to 752 1 to 669       669/669
(100 %)
0 diff
(100 %id)
BT019901   .a 84 to 915 1 to 832       832/834
(99 %)
1 diff
(99.9 %id)
CV023569 mixed .a 84 to 735 1 to 645       645/666
(96 %)
21 diff
(96.9 %id)
TI_1948103017   .a 84 to 756 140 to 813       674/1399
(48 %)
10 diff
(99.3 %id)
TI_1948103182   .a 84 to 295 132 to 343       212/241
(87 %)
6 diff
(97.6 %id)
TI_1948103343   .a 84 to 322 128 to 366       239/267
(89 %)
6 diff
(97.8 %id)
TI_1948102860   .a 86 to 825 137 to 879       743/1370
(54 %)
20 diff
(98.6 %id)
BF797323 lymph, lymphoma, cell line .a 91 to 747 1 to 655       655/932
(70 %)
3 diff
(99.7 %id)
BM790669 stomach .a 139 to 783 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
BM851712 stomach .a 139 to 686 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
N25156 melanocyte .a 155 to 637 1 to 484       484/484
(100 %)
1 diff
(99.8 %id)
BF526657 brain, glioblastoma with EGFR amplification .a 157 to 835 1 to 686       686/899
(76 %)
12 diff
(98.7 %id)
BE879861 large cell carcinoma, undifferentiated, lung .a 316 to 1140 1 to 818       818/853
(95 %)
44 diff
(94.9 %id)
TI_1948103344   .a 335 to 916 710 to 124       587/1306
(44 %)
33 diff
(97.5 %id)
TI_1948103183   .a 394 to 916 653 to 124       528/1390
(37 %)
25 diff
(98.3 %id)
TI_149291911   .a 490 to 1168 773 to 98   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 676/703
(96 %)
7 diff
(99.1 %id)
BM707407 eye, eye anterior segment .a 499 to 955 9 to 465       457/465
(98 %)
0 diff
(100 %id)
H50598 breast .a 501 to 917 1 to 421       421/427
(98 %)
6 diff
(98.6 %id)
BX102804 breast .a 503 to 1168 1 to 666   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 666/666
(100 %)
2 diff
(99.7 %id)
BU682293 lung .a 567 to 1168 620 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 602/602
(100 %)
2 diff
(99.7 %id)
BX381480 Placenta Cot 25-normalized .a 612 to 1473 895 to 34   fully sequenced,   862/895
(96 %)
3 diff
(99.7 %id)
H50599 breast .a 1005 to 1056 52 to 1       52/52
(100 %)
0 diff
(100 %id)
BM761221 lymph node, stomach .b 1 to 644 1 to 644   tiling clone,   644/644
(100 %)
1 diff
(99.9 %id)
CR608994 B cells (Ramos cell line) Cot 25-normalized .b 34 to 1656 1 to 1623 exact tiling clone,   1623/1623
(100 %)
0 diff
(100 %id)
BX364285   .b 34 to 840 1 to 799 P208L G209V G210V D211X H213S ... fully sequenced,   799/799
(100 %)
4 diff
(99.5 %id)
BE909744 epithelioid carcinoma, Pancreas .b 81 to 732 1 to 659       659/956
(68 %)
12 diff
(98.8 %id)
BG120647 adenocarcinoma, cell line, Liver .b 791 to 1568 8 to 796       789/1094
(72 %)
30 diff
(97.3 %id)
TI_227714445   .b 791 to 1552 851 to 90   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 762/978
(77 %)
8 diff
(99.2 %id)
AA706580 parathyroid gland, parathyroid tumor .b 793 to 1204 416 to 6       411/416
(98 %)
0 diff
(100 %id)
TI_154136832   .b 795 to 1432 686 to 53       634/1201
(52 %)
0 diff
(100 %id)
CA305932 Alveolar Macrophage, lung .b 802 to 1430 645 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 629/629
(100 %)
0 diff
(100 %id)
BX364284   .b 810 to 1656 847 to 1   fully sequenced,   847/847
(100 %)
1 diff
(99.9 %id)
AI267899 carcinoid, lung .b 813 to 1201 1 to 389     Submitted on the opposite strand 389/389
(100 %)
0 diff
(100 %id)
CA307201 Alveolar Macrophage, lung .b 813 to 1436 641 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 623/624
(99 %)
1 diff
(99.9 %id)
CD365211 Alveolar Macrophage, lung .b 815 to 1552 753 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 737/737
(100 %)
6 diff
(99.2 %id)
AW364061 colon .b 818 to 1022 214 to 7       208/214
(97 %)
0 diff
(100 %id)
AA749024 germinal center B cell .b 821 to 1202 434 to 53   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 382/382
(100 %)
0 diff
(100 %id)
AA934395 carcinoid, lung .b 833 to 1210 1 to 378     Submitted on the opposite strand 378/378
(100 %)
0 diff
(100 %id)
AI865431 lymph node, lymphoma, follicular mixed small and largecell .b 833 to 1425 596 to 1       596/596
(100 %)
22 diff
(96.4 %id)
BG236147 blood, lymphocyte .b 850 to 1424 575 to 1       575/578
(99 %)
13 diff
(97.8 %id)
BQ549840 insulinoma, Pancreas .b 853 to 1427 595 to 21     Submitted on the opposite strand 575/595
(96 %)
0 diff
(100 %id)
BQ015747 lung, Metastatic Chondrosarcoma .b 863 to 1430 584 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 568/568
(100 %)
1 diff
(99.9 %id)
BU621220 cell lines, Chondrosarcoma .b 907 to 1430 541 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 525/525
(100 %)
1 diff
(99.9 %id)
CA308410 Alveolar Macrophage, lung .b 907 to 1425 538 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 520/520
(100 %)
1 diff
(99.9 %id)
R49884 breast .b 952 to 1199 250 to 2       249/258
(96 %)
0 diff
(100 %id)
AA806068 germinal center B cell .b 955 to 1363 409 to 1       409/409
(100 %)
0 diff
(100 %id)
TI_151742305   .b 958 to 1441 557 to 74       484/557
(86 %)
0 diff
(100 %id)
BP389523 pancreatic islet .b 960 to 1432 1 to 473     Submitted on the opposite strand 473/473
(100 %)
1 diff
(99.8 %id)
CA306948 Alveolar Macrophage, lung .b 968 to 1425 474 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 458/458
(100 %)
2 diff
(99.6 %id)
H98636.
matches multiple genes
melanocyte .b 974 to 1423 450 to 1     also hits gene IGF1R 450/450
(100 %)
3 diff
(99.4 %id)
AI813956 adenocarcinoma, Pancreas .b 977 to 1430 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
AA929027 pooled .b 983 to 1423 441 to 1       441/445
(99 %)
0 diff
(100 %id)
AI784157 pooled .b 986 to 1204 224 to 6       219/224
(97 %)
0 diff
(100 %id)
AI803065 pooled .b 995 to 1427 437 to 5       433/437
(99 %)
0 diff
(100 %id)
AI356484 B-cell, chronic lymphotic leukemia .b 1006 to 1426 421 to 1       421/421
(100 %)
0 diff
(100 %id)
BQ548924 insulinoma, Pancreas .b 1006 to 1251 1 to 246       246/246
(100 %)
5 diff
(98.0 %id)
BQ548631 insulinoma, Pancreas .b 1012 to 1250 239 to 1       239/244
(97 %)
0 diff
(100 %id)
AA767182 germinal center B cell .b 1027 to 1423 409 to 13   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 397/397
(100 %)
0 diff
(100 %id)
AW191871 adenocarcinoma, Pancreas .b 1034 to 1424 392 to 2       391/392
(99 %)
0 diff
(100 %id)
AA926739 pooled .b 1039 to 1571 534 to 3       532/534
(99 %)
0 diff
(100 %id)
BU589524 mixed (pool of 40 RNAs) .b 1046 to 1429 1 to 384       384/1097
(35 %)
10 diff
(99.1 %id)
FN089085 breast carcinoma .b 1057 to 1149 89 to 1     Submitted on the opposite strand 89/89
(100 %)
4 diff
(95.6 %id)
BG398541 B-cells, primary B-cells from tonsils (cell line) .b 1064 to 1425 1 to 362   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 362/362
(100 %)
0 diff
(100 %id)
BX377120 Placenta Cot 25-normalized .b 1104 to 1534 435 to 1       435/452
(96 %)
31 diff
(93.2 %id)
AI700173 pooled .b 1120 to 1565 450 to 5       446/450
(99 %)
0 diff
(100 %id)
AI620202 Prostate .b 1124 to 1432 311 to 3       309/311
(99 %)
0 diff
(100 %id)
AI240048 pooled .b 1145 to 1575 432 to 1       432/432
(100 %)
7 diff
(98.4 %id)
AW183740 pooled .b 1160 to 1571 413 to 3       411/413
(99 %)
0 diff
(100 %id)
AI333556 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1162 to 1579 419 to 2       418/419
(99 %)
0 diff
(100 %id)
AI674469 Prostate .b 1162 to 1421 282 to 23   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 260/260
(100 %)
0 diff
(100 %id)
AI004784 pooled .b 1164 to 1575 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
FN111752 breast carcinoma .b 1180 to 1269 1 to 92       92/93
(98 %)
3 diff
(96.8 %id)
CK826276 insulinoma, Pancreas .b 1187 to 1425 256 to 18   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 239/239
(100 %)
0 diff
(100 %id)
AI309580 2 pooled tumors (clear cell type), Kidney .b 1239 to 1565 332 to 6       327/332
(98 %)
0 diff
(100 %id)
AW059915   .b 1258 to 1423 168 to 3       166/168
(98 %)
0 diff
(100 %id)
DB546311 hippocampus .b 1329 to 1764 1 to 436     Submitted on the opposite strand 436/436
(100 %)
1 diff
(99.8 %id)
AI791563 2 pooled tumors (clear cell type), Kidney .b 1342 to 1765 1 to 424       424/424
(100 %)
0 diff
(100 %id)
AI733071 2 pooled tumors (clear cell type), Kidney .b 1375 to 1774 400 to 1   tiling clone,   400/400
(100 %)
0 diff
(100 %id)
AA886208 2 pooled tumors (clear cell type), Kidney .b 1470 to 1774 305 to 1       305/305
(100 %)
0 diff
(100 %id)
NM_152854.2   .c 1 to 1554 1 to 1554 exact RefSeq,   1554/1554
(100 %)
0 diff
(100 %id)
DB477710 hippocampus .c 20 to 501 1 to 482   tiling clone,   482/482
(100 %)
2 diff
(99.6 %id)
AU077234   .c 20 to 127 1 to 107       107/107
(100 %)
2 diff
(98.2 %id)
AU100242   .c 20 to 320 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
AU107932   .c 20 to 70 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
AU107930   .c 48 to 97 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
BM849045 stomach .c 48 to 521 1 to 474       474/474
(100 %)
2 diff
(99.6 %id)
AJ300189   .c 50 to 808 1 to 759 exact tiling clone,   759/759
(100 %)
1 diff
(99.9 %id)
AU107931   .c 53 to 102 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
AA203290 liver and spleen .c 70 to 667 1 to 588       588/871
(67 %)
20 diff
(97.8 %id)
BM852527 stomach .c 133 to 557 1 to 424       424/426
(99 %)
2 diff
(99.6 %id)
TI_159724065   .c 563 to 1323 837 to 78   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 760/1006
(75 %)
8 diff
(99.3 %id)
TI_154128477   .c 593 to 1323 829 to 105   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 725/927
(78 %)
10 diff
(99.0 %id)
BM708033 eye, RPE and Choroid .c 604 to 963 1 to 360   fully sequenced, Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 360/360
(100 %)
0 diff
(100 %id)
AA147464 uterus .c 626 to 1005 1 to 385   fully sequenced,   385/385
(100 %)
3 diff
(99.3 %id)
CD247146 embryonic stem cells, WA01, passage 38 .c 646 to 1323 36 to 713   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 678/713
(95 %)
10 diff
(98.6 %id)
BF869012 lung_tumor .c 655 to 1063 12 to 419       408/428
(95 %)
8 diff
(98.2 %id)
AI457714 pooled .c 667 to 1101 455 to 17       439/456
(96 %)
0 diff
(100 %id)
CA944736 Human Lung Epithelial cells, lung .c 674 to 1323 666 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 650/650
(100 %)
0 diff
(100 %id)
CA417566 Chondrosarcoma Cell line .c 674 to 1323 665 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 649/649
(100 %)
2 diff
(99.7 %id)
CD366194 Alveolar Macrophage, lung .c 678 to 1323 662 to 16   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 647/647
(100 %)
2 diff
(99.7 %id)
BU731431 eye, RPE and Choroid .c 933 to 1470 557 to 19   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 539/539
(100 %)
1 diff
(99.9 %id)
AA147592 uterus .c 975 to 1326 351 to 1   fully sequenced,   351/351
(100 %)
1 diff
(99.8 %id)
BI759406 pooled colon, kidney, stomach .d 1 to 881 1 to 879 exact tiling clone,   879/932
(94 %)
25 diff
(97.4 %id)
TI_57146388   .d 1 to 881 61 to 939 exact     879/992
(88 %)
31 diff
(96.9 %id)
BI762330 pooled colon, kidney, stomach .d 505 to 804 1 to 306   tiling clone,   306/1247
(24 %)
10 diff
(99.2 %id)
AW403123 lymph .e-u 1 to 328 8 to 336   tiling clone,   329/336
(97 %)
6 diff
(98.3 %id)
TI_154139699   .e-u 1 to 626 80 to 711       632/870
(72 %)
83 diff
(90.5 %id)
AA210873 germinal center B cell .e-u 25 to 489 1 to 463   tiling clone, to resequence,   463/463
(100 %)
3 diff
(99.4 %id)
CN285974 embryonic stem cells, cell lines H1, H7, andH9 .e-u 118 to 700 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
AW500871 lymph .e-u 250 to 675 8 to 433       426/433
(98 %)
6 diff
(98.7 %id)
CF144238 lymph .e-u 250 to 537 8 to 296       289/296
(97 %)
6 diff
(98.0 %id)
TI_154155284   .e-u 250 to 758 80 to 588       509/509
(100 %)
7 diff
(98.7 %id)
TI_154155297   .e-u 250 to 758 90 to 599   tiling clone,   510/599
(85 %)
6 diff
(99.0 %id)
CF136478 lymph .e-u 602 to 877 1 to 276   tiling clone,   276/276
(100 %)
5 diff
(98.2 %id)
AI940090 colon .e-u 647 to 862 1 to 216       216/216
(100 %)
9 diff
(95.9 %id)
AW176493 colon .e-u 647 to 862 1 to 216       216/216
(100 %)
9 diff
(95.9 %id)
AW298127   .e-u 1111 to 1668 575 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 558/558
(100 %)
0 diff
(100 %id)
AA210713 germinal center B cell .e-u 1212 to 1668 457 to 1   to resequence,   457/458
(99 %)
0 diff
(100 %id)
BM456032 lymph, lymphoma, cell line .f 1 to 304 1 to 304   tiling clone,   304/304
(100 %)
0 diff
(100 %id)
BF797410 lymph, lymphoma, cell line .f 70 to 922 1 to 843   tiling clone,   843/921
(91 %)
62 diff
(93.3 %id)
BM548526 brain, hippocampus .g 1 to 862 10 to 873 exact tiling clone,   864/1122
(77 %)
33 diff
(97.1 %id)
BG323467 Kidney, renal cell adenocarcinoma .g 51 to 878 1 to 836 C8V V9R L10P W11L C13L ... tiling clone,   836/868
(96 %)
28 diff
(96.8 %id)
AX781593   .g 73 to 812 1 to 741 V136C R137E P138T T140D W141L ... tiling clone,   739/741
(99 %)
2 diff
(99.8 %id)
BF794321 lymph, lymphoma, cell line .g 77 to 818 16 to 757   tiling clone,   742/902
(82 %)
22 diff
(97.6 %id)
BI836881 pooled pancreas and spleen .h 1 to 944 1 to 952 exact tiling clone,   952/953
(99 %)
48 diff
(95.0 %id)
BI836804 pooled pancreas and spleen .h 1 to 738 1 to 742 K2M H102Q D114E D115R L116S ...     742/887
(83 %)
34 diff
(96.2 %id)
TI_57164230   .h 1 to 944 69 to 1020 exact     952/1021
(93 %)
48 diff
(95.3 %id)
TI_57164298   .h 1 to 865 37 to 922 K2M H102Q D114E D115R L116S ...     886/923
(95 %)
39 diff
(95.8 %id)
BX338623 Placenta Cot 25-normalized .h 166 to 931 10 to 775   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 766/775
(98 %)
6 diff
(99.3 %id)
BX338622 Placenta Cot 25-normalized .h 324 to 882 572 to 14   fully sequenced, Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 559/572
(97 %)
8 diff
(98.7 %id)
BC064518 Pancreas, Spleen, adult pooled .i 1 to 1524 1 to 1523 C77F tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1523/1523
(100 %)
3 diff
(99.9 %id)
TI_57166560   .i 1 to 786 36 to 820 C77F     785/820
(95 %)
19 diff
(97.7 %id)
BI833481 pooled pancreas and spleen .i 2 to 786 1 to 785 C77F     785/785
(100 %)
16 diff
(98.0 %id)
TI_57150598   .j 1 to 822 24 to 849 H73P P74A K75Q Q76A E77G ... tiling clone,   826/852
(96 %)
15 diff
(98.3 %id)
BI762994 pooled colon, kidney, stomach .j 7 to 822 1 to 820 H73P P74A K75Q Q76A E77G ... tiling clone,   820/823
(99 %)
9 diff
(99.0 %id)
CR619622 Placenta Cot 25-normalized .k 1 to 793 1 to 793 exact tiling clone,   793/793
(100 %)
0 diff
(100 %id)
BU623275 cell lines, Chondrosarcoma .l 1 to 705 723 to 19 exact tiling clone, AAA   705/705
(100 %)
0 diff
(100 %id)
BM477258 lymph, lymphoma, cell line .l 174 to 1274 1 to 1097   tiling clone,   1097/1098
(99 %)
25 diff
(97.8 %id)
AA748693 germinal center B cell .l 187 to 703 523 to 3       521/523
(99 %)
0 diff
(100 %id)
AI093825 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 187 to 696 504 to 1       504/504
(100 %)
5 diff
(99.1 %id)
CA392143 eye, RPE/choroid .l 189 to 696 523 to 17   AAA   507/507
(100 %)
0 diff
(100 %id)
AI633585 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 189 to 696 508 to 1       510/510
(100 %)
0 diff
(100 %id)
AA836307 germinal center B cell .l 198 to 703 510 to 3       508/510
(99 %)
0 diff
(100 %id)
AI307126 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 237 to 696 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AA737539 germinal center B cell .l 338 to 705 376 to 12   AAA   365/424
(86 %)
4 diff
(99.1 %id)
AA806435 germinal center B cell .l 396 to 705 321 to 12   AAA   310/310
(100 %)
0 diff
(100 %id)
AI357034 lymph node, lymphoma, follicular mixed small and largecell .l 423 to 696 298 to 25   AAA   274/274
(100 %)
2 diff
(99.3 %id)
AA828265 germinal center B cell .l 732 to 1212 484 to 4       481/484
(99 %)
0 diff
(100 %id)
TI_154188740   .l 876 to 1669 124 to 910   tiling clone,   787/944
(83 %)
16 diff
(98.4 %id)
AW262531 brain, three pooled meningiomas .l 898 to 1206 315 to 1       315/315
(100 %)
6 diff
(98.1 %id)
AW381242 head_neck .l 1546 to 2048 1 to 503   tiling clone,   503/504
(99 %)
2 diff
(99.7 %id)
AW380810 head_neck .l 1572 to 2104 1 to 534   tiling clone,   534/534
(100 %)
12 diff
(97.8 %id)
AW381229 head_neck .m 1 to 464 468 to 1   tiling clone,   468/468
(100 %)
7 diff
(98.6 %id)
AW381230 head_neck .m 16 to 449 434 to 1   tiling clone,   434/434
(100 %)
11 diff
(97.5 %id)
AW381224 head_neck .m 23 to 414 392 to 1   tiling clone,   392/392
(100 %)
9 diff
(97.8 %id)
BF350365 head_neck .m 75 to 488 419 to 2 E12D P14S S27F L28T L29P ... tiling clone,   418/419
(99 %)
4 diff
(99.1 %id)
AB209660 Spleen Gene CD40, variant not shown         This clone was ignored    
AA876065 germinal center B cell Gene CD40, variant not shown       AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
AW136039   Gene CD40, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j, .k, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI