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Gene TMEM33TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
490 supporting clones for gene TMEM33 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA872713 Prostate .a 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
DB294509   .a 23 to 867 2 to 850   tiling clone, capped   849/849
(100 %)
9 diff
(99.0 %id)
CB149652 Liver .a 24 to 578 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DB199478 trachea .a 25 to 600 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB217144 trachea .a 25 to 507 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
CB142037 Liver .a 93 to 505 1 to 413       413/413
(100 %)
2 diff
(99.6 %id)
AU160457   .a 2001 to 2555 547 to 1   tiling clone,   547/552
(99 %)
11 diff
(98.1 %id)
DA150512 amygdala .b 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA449016 tongue, tumor tissue .b 6 to 538 2 to 535   capped   534/534
(100 %)
3 diff
(99.5 %id)
BM754292 stomach .b 9 to 535 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
DA186573 amygdala .b 10 to 535 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA241019 brain .b 10 to 598 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA803597 brain .b 10 to 578 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA875387 Prostate .b 10 to 579 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CB139188 Liver .b 24 to 521 1 to 498       498/498
(100 %)
0 diff
(100 %id)
CN345093 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 32 to 666 1 to 634   tiling clone,   634/634
(100 %)
1 diff
(99.9 %id)
AA360978   .b 44 to 312 1 to 269       269/269
(100 %)
0 diff
(100 %id)
AW965927   .b 45 to 637 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
BF697385 brain, primitive neuroectoderm .b 51 to 689 1 to 638       638/895
(71 %)
31 diff
(96.6 %id)
BI850301 brain, primitive neuroectoderm .b 52 to 653 1 to 602       602/602
(100 %)
10 diff
(98.4 %id)
AL530795 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 69 to 1117 1 to 1044 A67T A151T S235C tiling clone, AAA   1044/1110
(94 %)
14 diff
(98.8 %id)
AL530794 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 1129 to 2230 1082 to 1   tiling clone,   1082/1158
(93 %)
30 diff
(97.5 %id)
AL598045   .c -8 to 437 1 to 446       446/446
(100 %)
0 diff
(100 %id)
NM_018126.2   .c -8 to 7708 1 to 7717 exact RefSeq,   7717/7717
(100 %)
0 diff
(100 %id)
BP351063   .c 1 to 441 9 to 449       449/454
(98 %)
3 diff
(99.4 %id)
DA254192 caudate nucleus .c 1 to 561 5 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP363678 lung .c 1 to 580 2 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA214201 brain .c 1 to 452 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
CR609993 Neuroblastoma Cot 25-normalized .c 1 to 1341 1 to 1341 exact tiling clone,   1341/1341
(100 %)
0 diff
(100 %id)
DB223370 trachea .c 4 to 579 2 to 580   capped   579/579
(100 %)
3 diff
(99.5 %id)
AL598525   .c 8 to 741 1 to 735       735/735
(100 %)
3 diff
(99.6 %id)
CA488997   .c 8 to 884 1 to 880       880/889
(98 %)
6 diff
(99.4 %id)
BM193450 leukopheresis .c 8 to 363 1 to 356       356/359
(99 %)
8 diff
(97.8 %id)
BE247449 leukopheresis .c 8 to 378 1 to 371       371/371
(100 %)
5 diff
(98.7 %id)
BP338978 Spleen .c 9 to 586 1 to 578       578/582
(99 %)
11 diff
(98.2 %id)
BE245132 leukopheresis .c 9 to 399 1 to 389       389/399
(97 %)
8 diff
(98.0 %id)
BM152425 leukopheresis .c 9 to 263 1 to 254       254/261
(97 %)
8 diff
(97.0 %id)
DA289906 hippocampus .c 10 to 509 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DA396506 thalamus .c 10 to 586 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA478593   .c 10 to 577 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA566269 heart .c 10 to 576 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA618941   .c 10 to 586 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA664564   .c 10 to 777 2 to 770   capped   769/769
(100 %)
7 diff
(99.1 %id)
DA740418   .c 10 to 480 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DA757014   .c 10 to 568 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA986636 synovial membrane tissue from rheumatioidarthritis .c 10 to 583 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB197506 trachea .c 10 to 582 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB210694 trachea .c 10 to 567 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB218484 trachea .c 10 to 576 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DB237627 trachea .c 10 to 581 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AK023062   .c 12 to 2442 1 to 2431 exact available from FLJ,   2431/2431
(100 %)
3 diff
(99.9 %id)
AU130150   .c 13 to 865 2 to 853   capped   852/856
(99 %)
4 diff
(99.6 %id)
AL702812 human skeletal muscle .c 14 to 512 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BF701808 brain, primitive neuroectoderm .c 14 to 714 1 to 699       699/838
(83 %)
12 diff
(98.6 %id)
BU176508 eye, retinoblastoma .c 14 to 854 16 to 866       851/867
(98 %)
18 diff
(98.0 %id)
DN994933 brain, whole brain .c 18 to 684 1 to 668       668/676
(98 %)
7 diff
(99.0 %id)
BM748975 stomach .c 21 to 588 12 to 579       568/579
(98 %)
5 diff
(99.2 %id)
DA133001 alzheimer cortex .c 22 to 565 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA153060 amygdala .c 22 to 586 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BF696049 brain, primitive neuroectoderm .c 22 to 683 1 to 662       662/833
(79 %)
28 diff
(96.7 %id)
BF700593 brain, primitive neuroectoderm .c 22 to 753 1 to 734       734/792
(92 %)
30 diff
(96.3 %id)
BP199159 brain .c 23 to 441 1 to 419       419/424
(98 %)
4 diff
(99.1 %id)
DA576997   .c 23 to 592 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
N34068 melanocyte .c 23 to 462 1 to 445       445/445
(100 %)
15 diff
(96.7 %id)
BI752234 brain .c 23 to 554 1 to 526       526/527
(99 %)
13 diff
(97.6 %id)
AK001387   .c 24 to 2707 1 to 2684 N7S tiling clone, available from FLJ,   2684/2684
(100 %)
4 diff
(99.9 %id)
DA145882 amygdala .c 24 to 594 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DT218054 brain .c 24 to 585 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DA497252 brain .c 24 to 586 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BP246571 Kidney .c 24 to 603 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CB995426 placenta, pre-eclamptic placenta .c 24 to 757 28 to 764       737/829
(88 %)
23 diff
(97.3 %id)
CB993799 placenta, pre-eclamptic placenta .c 24 to 682 28 to 686       659/708
(93 %)
8 diff
(98.9 %id)
CB961829 placenta, pre-eclamptic placenta .c 24 to 669 28 to 679       652/739
(88 %)
13 diff
(98.3 %id)
DA604311   .c 24 to 545 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
BP382850 ilea mucosa .c 24 to 757 1 to 733       733/972
(75 %)
8 diff
(99.2 %id)
CB128326 Liver .c 24 to 516 1 to 493       493/493
(100 %)
0 diff
(100 %id)
BP297179   .c 24 to 603 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BP300174   .c 24 to 605 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP300479   .c 24 to 601 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
BP328380 rectum .c 24 to 604 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP328389 rectum .c 24 to 605 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA999248 breast, tumor tissue .c 24 to 559 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB211989 trachea .c 24 to 560 2 to 541   capped   540/540
(100 %)
4 diff
(99.3 %id)
DA150025 amygdala .c 25 to 604 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA180852 amygdala .c 25 to 588 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA221411 brain .c 25 to 590 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA232833 brain .c 25 to 597 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA369964 subthalamic nucleus .c 25 to 592 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA439006 tongue, tumor tissue .c 25 to 586 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA443086 tongue, tumor tissue .c 25 to 606 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA478819   .c 25 to 579 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA499831 brain .c 25 to 577 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA503672 brain .c 25 to 581 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA523797 brain .c 25 to 594 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA551005   .c 25 to 553 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BP260915 small intestine .c 25 to 605 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
TI_57215258   .c 25 to 554 55 to 578       524/579
(90 %)
8 diff
(98.7 %id)
DA669598 esophagus .c 25 to 561 2 to 540   capped   539/539
(100 %)
4 diff
(99.3 %id)
AU127259   .c 25 to 757 2 to 735   capped   734/752
(97 %)
10 diff
(98.7 %id)
DA740484   .c 25 to 509 2 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DA773215 brain .c 25 to 564 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA786722 brain .c 25 to 590 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA818954   .c 25 to 583 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA969255 stomach .c 25 to 587 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB128374 thymus .c 25 to 597 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB156878 thymus .c 25 to 598 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB199807 trachea .c 25 to 610 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB280774 uterus .c 25 to 569 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB292012 uterus .c 25 to 614 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
CB128750 Liver .c 27 to 612 1 to 586       586/586
(100 %)
0 diff
(100 %id)
BM847480 myeloma .c 27 to 560 1 to 534       534/534
(100 %)
0 diff
(100 %id)
AL520198 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 28 to 1113 28 to 1105 C204X R205S T206D F208I N209*     1078/1105
(97 %)
22 diff
(98.1 %id)
DA623863 Kidney .c 28 to 574 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA714898   .c 28 to 569 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BQ898133 dorsal root ganglia .c 29 to 892 11 to 881       871/971
(89 %)
29 diff
(97.1 %id)
CR592529 B cells (Ramos cell line) Cot 25-normalized .c 30 to 1325 1 to 1296 exact     1296/1296
(100 %)
0 diff
(100 %id)
AL559851 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 30 to 943 1 to 916   fully sequenced,   916/916
(100 %)
7 diff
(99.3 %id)
AL561543 B cells from Burkitt lymphoma .c 30 to 917 1 to 887   fully sequenced,   887/887
(100 %)
6 diff
(99.4 %id)
BX951375   .c 31 to 629 1 to 599       599/599
(100 %)
3 diff
(99.5 %id)
BG106860 lymph, lymphoma, cell line .c 31 to 848 1 to 802       802/940
(85 %)
25 diff
(97.4 %id)
CD107729 brain, Pituitary .c 38 to 449 1 to 416       416/769
(54 %)
5 diff
(99.4 %id)
BG702986 brain, hippocampus .c 39 to 730 1 to 695       695/699
(99 %)
16 diff
(97.8 %id)
BM847382 lymph node, stomach .c 42 to 159 1 to 118       118/118
(100 %)
1 diff
(99.2 %id)
BM545363 brain, hippocampus .c 43 to 641 10 to 609       600/1238
(48 %)
12 diff
(99.1 %id)
DB474994 hippocampus .c 44 to 539 1 to 496       496/497
(99 %)
2 diff
(99.6 %id)
DB479274 hippocampus .c 44 to 504 1 to 461       461/461
(100 %)
1 diff
(99.8 %id)
BE780928 eye, retinoblastoma .c 45 to 660 1 to 618       618/619
(99 %)
4 diff
(99.4 %id)
CA495394   .c 45 to 920 1 to 881       879/881
(99 %)
8 diff
(99.1 %id)
CB121754 Liver .c 46 to 362 1 to 317       317/317
(100 %)
2 diff
(99.4 %id)
BM842991 lymph node, stomach .c 46 to 572 1 to 527       527/527
(100 %)
0 diff
(100 %id)
DA712744   .c 47 to 553 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
N28905 melanocyte .c 49 to 621 1 to 564       564/568
(99 %)
23 diff
(96.0 %id)
BP383627   .c 49 to 547 1 to 499       499/499
(100 %)
4 diff
(99.2 %id)
BU182072 eye, retinoblastoma .c 50 to 908 1 to 862       860/862
(99 %)
8 diff
(99.1 %id)
DA625885 Kidney .c 52 to 604 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CX873677 embryonic stem .c 53 to 886 1 to 833       833/833
(100 %)
0 diff
(100 %id)
DA506301 brain .c 55 to 530 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DA880850   .c 55 to 597 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA995219 synovial membrane tissue from rheumatioidarthritis .c 55 to 597 2 to 546   capped   545/546
(99 %)
3 diff
(99.5 %id)
DB012541 esophageal, tumor tissue .c 55 to 613 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA459192 tongue, tumor tissue .c 57 to 586 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
BE877471 large cell carcinoma, undifferentiated, lung .c 62 to 807 1 to 749       747/754
(99 %)
12 diff
(98.5 %id)
BU663410 blood .c 67 to 612 13 to 556       544/556
(97 %)
6 diff
(99.0 %id)
BE396287 endometrium, adenocarcinoma cell line, uterus .c 71 to 753 28 to 703       676/826
(81 %)
17 diff
(98.0 %id)
BE898831 adenocarcinoma cell line, ovary .c 71 to 835 1 to 756       756/833
(90 %)
20 diff
(97.6 %id)
BU175722 large cell carcinoma, lung .c 77 to 892 1 to 819       819/857
(95 %)
11 diff
(98.8 %id)
BI517497 pooled colon, kidney, stomach .c 79 to 1059 1 to 994       918/994
(92 %)
30 diff
(97.0 %id)
TI_45235842   .c 79 to 1059 60 to 1053       918/1053
(87 %)
36 diff
(96.6 %id)
DA576964   .c 94 to 657 2 to 565   capped   564/564
(100 %)
6 diff
(99.0 %id)
DB013154 esophageal, tumor tissue .c 95 to 667 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
CA842185 Pancreas, Purified pancreatic islet .c 101 to 240 1 to 140       140/140
(100 %)
0 diff
(100 %id)
CN345094 embryonic stem cells, DMSO-treated H9 cellline .c 107 to 283 1 to 177       177/177
(100 %)
0 diff
(100 %id)
BM452373 eye, retinoblastoma .c 108 to 977 1 to 876       876/1049
(83 %)
12 diff
(98.9 %id)
DA204105 brain .c 110 to 713 2 to 607   capped   606/606
(100 %)
1 diff
(99.9 %id)
BM465799 eye, retinoblastoma .c 117 to 966 1 to 857       855/1034
(82 %)
14 diff
(98.7 %id)
BM509861 Pancreas, Purified pancreatic islet .c 119 to 662 52 to 595       544/595
(91 %)
8 diff
(98.7 %id)
CK822649 Pancreas, Purified pancreatic islet .c 119 to 597 9 to 488     Submitted on the opposite strand 480/488
(98 %)
9 diff
(98.2 %id)
BX498192 Liver .c 123 to 386 136 to 400       371/400
(92 %)
12 diff
(97.0 %id)
BF213035 bone marrow, from chronic myelogenous leukemia .c 225 to 844 1 to 616       616/879
(70 %)
27 diff
(97.0 %id)
BG116274 duodenal adenocarcinoma, cell line, small intestine .c 226 to 882 1 to 657       657/1138
(57 %)
8 diff
(99.3 %id)
BC000948 Placenta, choriocarcinoma .c 262 to 1697 1 to 1436 exact available from MGC, AAA   1436/1436
(100 %)
3 diff
(99.8 %id)
H11885 whole brain .c 262 to 726 1 to 476       474/479
(98 %)
24 diff
(95.0 %id)
H15231 whole brain .c 262 to 684 1 to 429       429/434
(98 %)
24 diff
(94.5 %id)
CA454965   .c 264 to 1139 1 to 881 F238L I239Y S240K R241Q L242I ...     881/893
(98 %)
6 diff
(99.4 %id)
BE538282 cervix .c 270 to 965 1 to 702       702/889
(78 %)
26 diff
(97.1 %id)
BE877035 large cell carcinoma, undifferentiated, lung .c 274 to 1044 1 to 771       771/929
(82 %)
16 diff
(98.3 %id)
H29377 whole brain .c 312 to 757 1 to 453       453/497
(91 %)
16 diff
(96.8 %id)
AI924515 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 345 to 872 1 to 528     Submitted on the opposite strand 528/528
(100 %)
1 diff
(99.9 %id)
TI_1948073797   .c 350 to 1106 129 to 895 P222T A223C C224L L226T F227V ...     767/1114
(68 %)
22 diff
(98.1 %id)
CR457260   .c 357 to 1099 1 to 743       743/744
(99 %)
2 diff
(99.8 %id)
CV023871 mixed .c 357 to 1016 1 to 661       661/661
(100 %)
7 diff
(99.0 %id)
AA262633 germinal center B cell .c 445 to 888 1 to 444       444/444
(100 %)
0 diff
(100 %id)
BE891669 melanotic melanoma, skin .c 465 to 1214 1 to 742       742/946
(78 %)
21 diff
(97.8 %id)
BG534673 lung .c 475 to 1125 1 to 653       653/653
(100 %)
4 diff
(99.4 %id)
DA386022 thalamus .c 483 to 1054 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
TI_149289577   .c 496 to 1355 938 to 80   AAA   859/1021
(84 %)
11 diff
(99.0 %id)
DA830411 placenta .c 501 to 1299 2 to 821   capped   820/833
(98 %)
22 diff
(97.4 %id)
AA425202   .c 504 to 930 1 to 427       427/427
(100 %)
0 diff
(100 %id)
U46410 liver cell line, pancreatic cancer .c 504 to 809 25 to 337       313/340
(92 %)
19 diff
(94.5 %id)
DB027016 testis .c 524 to 1082 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA706018   .c 547 to 1112 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BF666290 brain, primitive neuroectoderm .c 560 to 1201 1 to 647       648/911
(71 %)
25 diff
(97.3 %id)
DA668907 esophagus .c 560 to 898 2 to 340   capped   339/339
(100 %)
0 diff
(100 %id)
BX372847 Neuroblastoma Cot 25-normalized .c 562 to 1341 782 to 1       782/911
(85 %)
17 diff
(98.2 %id)
FN056556 breast carcinoma .c 563 to 657 1 to 95       95/95
(100 %)
1 diff
(99.0 %id)
CB128157 Liver .c 642 to 1215 1 to 574       574/574
(100 %)
5 diff
(99.2 %id)
BU681718 lung .c 647 to 1355 727 to 19   AAA   709/709
(100 %)
3 diff
(99.6 %id)
BF000306 colon, colon tumor, RER+ .c 685 to 1362 682 to 1       682/715
(95 %)
13 diff
(98.2 %id)
AW152565 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 687 to 1240 553 to 1       553/589
(93 %)
4 diff
(99.4 %id)
TI_149289656   .c 688 to 1404 807 to 98   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 710/918
(77 %)
14 diff
(98.5 %id)
AW026430 brain, glioblastoma (pooled) .c 696 to 1355 657 to 1       657/657
(100 %)
3 diff
(99.6 %id)
BF668570 brain, primitive neuroectoderm .c 707 to 1367 1 to 661       661/892
(74 %)
28 diff
(96.9 %id)
BF698983 brain, primitive neuroectoderm .c 707 to 1377 1 to 652       653/654
(99 %)
22 diff
(96.7 %id)
BM971017 lung .c 716 to 1404 705 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 687/687
(100 %)
6 diff
(99.2 %id)
BE218848 carcinoid, lung .c 720 to 1270 1 to 551     Submitted on the opposite strand 551/551
(100 %)
1 diff
(99.9 %id)
BG288670 bladder, transitional cell papilloma, cell line .c 730 to 1356 1 to 624   AAA   625/624
(100 %)
7 diff
(98.9 %id)
BG288756 bladder, transitional cell papilloma, cell line .c 730 to 1326 1 to 599       600/664
(90 %)
8 diff
(98.8 %id)
FN163387 breast carcinoma .c 759 to 849 1 to 92       92/96
(95 %)
2 diff
(98.0 %id)
BG059371 nasopharynx, normal epithelium .c 763 to 864 1 to 102       102/108
(94 %)
3 diff
(97.3 %id)
BM840735 lymph node, stomach .c 765 to 1258 1 to 494       494/494
(100 %)
0 diff
(100 %id)
BM841319 lymph node, stomach .c 765 to 1261 1 to 499       499/499
(100 %)
5 diff
(99.0 %id)
BM840999 lymph node, stomach .c 765 to 1246 1 to 482       482/482
(100 %)
0 diff
(100 %id)
BM505443 Pancreas, Purified pancreatic islet .c 780 to 1360 599 to 18   AAA   582/582
(100 %)
8 diff
(98.7 %id)
BF590978 colon, colon tumor, RER+ .c 806 to 1361 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
CA748728 Alveolar Macrophage, lung .c 812 to 1361 568 to 19   AAA   550/550
(100 %)
10 diff
(98.2 %id)
CA841907 Pancreas, Purified pancreatic islet .c 813 to 1403 591 to 1       591/591
(100 %)
1 diff
(99.9 %id)
BF033495 adenocarcinoma, ovary .c 818 to 1504 1 to 693       693/855
(81 %)
16 diff
(98.2 %id)
BF696573 brain, primitive neuroectoderm .c 818 to 1474 39 to 690       652/844
(77 %)
29 diff
(96.6 %id)
BF476124 Kidney .c 830 to 1355 528 to 3       526/528
(99 %)
0 diff
(100 %id)
AI339806 adenocarcinoma, colon .c 832 to 1284 453 to 1       453/453
(100 %)
0 diff
(100 %id)
TI_1948074153   .c 845 to 1099 385 to 131       255/282
(90 %)
0 diff
(100 %id)
DA061957 cerebellum .c 855 to 1415 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
AL582718 B cells from Burkitt lymphoma .c 856 to 1320 468 to 5   fully sequenced,   464/468
(99 %)
4 diff
(99.2 %id)
TI_1948073974   .c 858 to 1099 369 to 128       242/269
(89 %)
0 diff
(100 %id)
TI_1948073628   .c 860 to 1099 367 to 128       240/267
(89 %)
0 diff
(100 %id)
BG190038   .c 883 to 1361 1 to 479   AAA   479/479
(100 %)
7 diff
(98.6 %id)
BP220833 colon .c 883 to 1455 1 to 573       573/573
(100 %)
10 diff
(98.3 %id)
BX392060 Neuroblastoma Cot 10-normalized .c 894 to 1343 453 to 6       448/453
(98 %)
0 diff
(100 %id)
BX393521 Neuroblastoma Cot 10-normalized .c 894 to 1344 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
BX393520 Neuroblastoma Cot 10-normalized .c 905 to 1327 424 to 1       424/435
(97 %)
4 diff
(99.1 %id)
AL581386 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 913 to 1290 412 to 35   fully sequenced,   378/379
(99 %)
0 diff
(100 %id)
AI089706 brain, glioblastoma (pooled) .c 917 to 1362 446 to 1       446/446
(100 %)
1 diff
(99.8 %id)
BG612040 adenocarcinoma, Prostate .c 932 to 1663 1 to 728       728/728
(100 %)
9 diff
(98.8 %id)
N35615 melanocyte .c 934 to 1355 425 to 1       425/427
(99 %)
5 diff
(98.9 %id)
AW015777   .c 936 to 1361 442 to 18   AAA   425/425
(100 %)
4 diff
(99.1 %id)
BF697848 brain, primitive neuroectoderm .c 936 to 1633 1 to 708       708/709
(99 %)
33 diff
(95.4 %id)
DB211971 trachea .c 976 to 1522 2 to 548   capped   547/547
(100 %)
4 diff
(99.3 %id)
BU626484 Alveolar Macrophage, lung .c 981 to 1697 735 to 19   AAA   717/717
(100 %)
0 diff
(100 %id)
AA984049 schizophrenic brain S-11 frontal lobe .c 982 to 1405 1 to 424     Submitted on the opposite strand 424/426
(99 %)
2 diff
(99.6 %id)
BF812678 colon_ins .c 1009 to 1213 213 to 11     Submitted on the opposite strand 203/213
(95 %)
0 diff
(100 %id)
AW304784 brain, three pooled meningiomas .c 1035 to 1355 321 to 1       321/321
(100 %)
3 diff
(99.1 %id)
CD368991 Alveolar Macrophage, lung .c 1065 to 1697 651 to 19   AAA   633/633
(100 %)
1 diff
(99.9 %id)
FN124041 breast carcinoma .c 1066 to 1155 1 to 89       89/98
(90 %)
5 diff
(94.9 %id)
BG285168 adenocarcinoma, cell line, Prostate .c 1079 to 1355 1 to 277   AAA   277/277
(100 %)
0 diff
(100 %id)
BG818454 anaplastic oligodendroglioma with 1p/19qloss, brain .c 1090 to 1761 11 to 681       671/681
(98 %)
6 diff
(99.2 %id)
DA717741   .c 1127 to 1706 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
BF590700 colon, colon tumor, RER+ .c 1128 to 1692 565 to 1       565/565
(100 %)
1 diff
(99.9 %id)
BF667128 brain, primitive neuroectoderm .c 1131 to 1689 1 to 559       559/786
(71 %)
12 diff
(98.5 %id)
BE890101 leiomyosarcoma, uterus .c 1138 to 1754 1 to 618       618/924
(66 %)
5 diff
(99.5 %id)
AI743342 pooled .c 1145 to 1696 552 to 1       552/552
(100 %)
3 diff
(99.5 %id)
AW299517 Kidney .c 1145 to 1690 554 to 9       546/554
(98 %)
0 diff
(100 %id)
CX757789 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 1158 to 1745 1 to 584     Submitted on the opposite strand 584/719
(81 %)
13 diff
(98.2 %id)
BF114821 pooled .c 1162 to 1684 533 to 12       522/533
(97 %)
0 diff
(100 %id)
BX109623 whole brain .c 1167 to 1697 545 to 15   AAA Submitted on the opposite strand 531/531
(100 %)
1 diff
(99.9 %id)
AI433598 lymph node, lymphoma, follicular mixed small and largecell .c 1177 to 1362 187 to 2       186/187
(99 %)
0 diff
(100 %id)
AI767112 2 pooled tumors (clear cell type), Kidney .c 1193 to 1698 518 to 14       505/518
(97 %)
0 diff
(100 %id)
AW371333 breast .c 1197 to 1823 1 to 625       625/628
(99 %)
37 diff
(94.2 %id)
AW577155 breast .c 1199 to 1776 1 to 577       577/577
(100 %)
31 diff
(94.7 %id)
AW577149 breast .c 1208 to 1856 7 to 653       647/653
(99 %)
6 diff
(99.1 %id)
AW580664 leiomios .c 1211 to 1846 1 to 635       635/635
(100 %)
15 diff
(97.7 %id)
EC501587 Prostate .c 1217 to 1324 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
BQ026093 placenta .c 1217 to 1697 498 to 18   AAA   481/481
(100 %)
1 diff
(99.8 %id)
AI950178 pooled germ cell tumors .c 1249 to 1697 449 to 1       449/449
(100 %)
1 diff
(99.8 %id)
BF382671 brain, primitive neuroectoderm .c 1253 to 1998 1 to 762       762/764
(99 %)
73 diff
(90.5 %id)
CN345091 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1266 to 1788 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BF593283 Kidney .c 1274 to 1693 434 to 15   AAA   420/420
(100 %)
1 diff
(99.8 %id)
AI829228 adenocarcinoma, Pancreas .c 1277 to 1698 422 to 1       422/422
(100 %)
0 diff
(100 %id)
BP382115 adipose tissue .c 1284 to 1900 1 to 618       618/619
(99 %)
10 diff
(98.4 %id)
AK024587 adipose tissue .c 1284 to 2707 1 to 1425   available from FLJ, AAA   1425/1425
(100 %)
5 diff
(99.7 %id)
H29288 whole brain .c 1285 to 1697 428 to 11       418/430
(97 %)
0 diff
(100 %id)
AW748669 breast .c 1288 to 1711 1 to 431       431/431
(100 %)
40 diff
(90.8 %id)
H15171 whole brain .c 1288 to 1697 425 to 11   AAA   415/415
(100 %)
9 diff
(97.9 %id)
AW371330 breast .c 1290 to 1798 77 to 587       511/587
(87 %)
6 diff
(99.0 %id)
AA827260 germinal center B cell .c 1307 to 1697 401 to 11   AAA   391/391
(100 %)
0 diff
(100 %id)
AL561862 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1338 to 2434 1095 to 1       1095/1095
(100 %)
17 diff
(98.5 %id)
H17538 whole brain .c 1339 to 1697 370 to 11   AAA   360/498
(72 %)
6 diff
(98.8 %id)
H11523 whole brain .c 1345 to 1697 376 to 12   AAA   365/413
(88 %)
12 diff
(97.1 %id)
AA243617 germinal center B cell .c 1348 to 1697 350 to 1       350/350
(100 %)
0 diff
(100 %id)
CN345092 embryonic stem cells, cell lines H1, H7, andH9 .c 1358 to 2102 1 to 745       745/745
(100 %)
3 diff
(99.6 %id)
DT217853 brain .c 1408 to 2102 1 to 695       695/695
(100 %)
0 diff
(100 %id)
N25682 melanocyte .c 1416 to 1697 282 to 1       282/282
(100 %)
1 diff
(99.7 %id)
CB267879 adipose .c 1426 to 2105 1 to 681       681/692
(98 %)
2 diff
(99.8 %id)
AW577151 breast .c 1439 to 2138 705 to 10       696/705
(98 %)
0 diff
(100 %id)
BI040840 nervous_tumor .c 1439 to 1917 1 to 481       481/481
(100 %)
11 diff
(97.8 %id)
AW748675 breast .c 1453 to 2098 650 to 6       645/651
(99 %)
0 diff
(100 %id)
AW577148 breast .c 1461 to 2132 671 to 1       671/671
(100 %)
11 diff
(98.4 %id)
AW577157 breast .c 1471 to 2068 605 to 7       599/607
(98 %)
0 diff
(100 %id)
AW577161 breast .c 1489 to 2143 651 to 3       649/652
(99 %)
0 diff
(100 %id)
AW577154 breast .c 1513 to 2096 587 to 1       587/589
(99 %)
32 diff
(94.6 %id)
EH345097   .c 1516 to 1582 1 to 67       67/67
(100 %)
0 diff
(100 %id)
AW867020 stomach_normal .c 1518 to 2042 527 to 2       526/533
(98 %)
0 diff
(100 %id)
AA045913 uterus .c 1520 to 1707 1 to 188       188/194
(96 %)
5 diff
(97.5 %id)
AW867018 stomach_normal .c 1531 to 2058 1 to 525       525/546
(96 %)
7 diff
(98.8 %id)
AW371332 breast .c 1599 to 2087 499 to 4       496/499
(99 %)
0 diff
(100 %id)
DA494995 brain .c 1679 to 2242 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AW867078 stomach_normal .c 1713 to 2045 336 to 4       333/336
(99 %)
0 diff
(100 %id)
EC570814 Prostate .c 1731 to 1835 107 to 4       104/107
(97 %)
0 diff
(100 %id)
AW577160 breast .c 1779 to 2132 3 to 355       353/355
(99 %)
6 diff
(98.4 %id)
AA371131 Prostate .c 1876 to 2138 1 to 264       264/267
(98 %)
3 diff
(98.9 %id)
BE501691 Kidney .c 1884 to 2443 560 to 1       560/560
(100 %)
0 diff
(100 %id)
BF739825 Kidney .c 1893 to 2314 427 to 1       427/427
(100 %)
5 diff
(98.9 %id)
AU152164   .c 1908 to 2442 534 to 1       534/551
(96 %)
7 diff
(98.8 %id)
FN048303 breast carcinoma .c 1915 to 2001 1 to 88       88/88
(100 %)
3 diff
(96.6 %id)
AW518632 2 pooled tumors (clear cell type), Kidney .c 1933 to 2314 399 to 18   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 382/382
(100 %)
0 diff
(100 %id)
AW577164 breast .c 1955 to 2140 185 to 1       185/216
(85 %)
4 diff
(98.2 %id)
AW577153 breast .c 1979 to 2138 163 to 2       162/165
(98 %)
0 diff
(100 %id)
AW301721 Kidney .c 1985 to 2443 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AA045780 uterus .c 2006 to 2442 440 to 2       439/440
(99 %)
0 diff
(100 %id)
AI913003 Kidney .c 2116 to 2708 593 to 1       593/593
(100 %)
0 diff
(100 %id)
DB375569 placenta .c 2142 to 2707 562 to 1       562/568
(98 %)
22 diff
(96.2 %id)
BG168845 hypernephroma, cell line, Kidney .c 2181 to 2737 1 to 557       557/652
(85 %)
7 diff
(99.0 %id)
AF403224   .c 2199 to 2389 1 to 191       191/191
(100 %)
0 diff
(100 %id)
BI468575 insulinoma, Pancreas .c 2207 to 2405 1 to 199       199/199
(100 %)
8 diff
(96.0 %id)
BM510246 insulinoma, Pancreas .c 2207 to 2721 1 to 515   tiling clone,   515/515
(100 %)
5 diff
(99.1 %id)
AI887602 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 2223 to 2715 495 to 3       493/495
(99 %)
0 diff
(100 %id)
BF001573 colon, colon tumor, RER+ .c 2231 to 2707 489 to 13   AAA   477/477
(100 %)
1 diff
(99.8 %id)
DB547958 hippocampus .c 2235 to 2706 1 to 472     Submitted on the opposite strand 472/473
(99 %)
2 diff
(99.6 %id)
CN297074 embryonic stem cells, cell lines H1, H7, andH9 .c 2236 to 2850 1 to 615       615/615
(100 %)
0 diff
(100 %id)
CB161861 Liver .c 2237 to 2765 1 to 529       529/529
(100 %)
0 diff
(100 %id)
AA476267   .c 2249 to 2710 464 to 3       462/464
(99 %)
0 diff
(100 %id)
DB543820 hippocampus .c 2250 to 2706 1 to 457     Submitted on the opposite strand 457/458
(99 %)
2 diff
(99.6 %id)
AI291712 placenta .c 2261 to 2707 457 to 11   AAA   447/447
(100 %)
0 diff
(100 %id)
DB322097   .c 2261 to 2707 452 to 1       452/454
(99 %)
9 diff
(98.1 %id)
AI307636 2 pooled tumors (clear cell type), Kidney .c 2282 to 2710 430 to 2       429/430
(99 %)
0 diff
(100 %id)
BM151004 leukopheresis .c 2305 to 2715 414 to 4       411/416
(98 %)
0 diff
(100 %id)
GD144343   .c 2307 to 2450 7 to 150       144/163
(88 %)
3 diff
(98.2 %id)
AW418848 2 pooled tumors (clear cell type), Kidney .c 2319 to 2710 393 to 2       392/393
(99 %)
0 diff
(100 %id)
AW188494 colon, moderately differentiated adenocarcinoma .c 2332 to 2710 382 to 3       380/404
(94 %)
0 diff
(100 %id)
BE247051 leukopheresis .c 2394 to 2702 309 to 1       309/309
(100 %)
2 diff
(99.4 %id)
AU149906   .c 2450 to 2707 258 to 1       258/258
(100 %)
3 diff
(98.9 %id)
DA231929 brain .c 2497 to 3003 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
CD102358 Pooled-Skin .c 2513 to 3234 1 to 724   tiling clone,   724/729
(99 %)
3 diff
(99.6 %id)
FN164532 breast carcinoma .c 2544 to 2639 95 to 1     Submitted on the opposite strand 95/99
(95 %)
1 diff
(99.0 %id)
EC557310 Prostate .c 2642 to 2705 67 to 4       64/68
(94 %)
0 diff
(100 %id)
DA756790   .c 2751 to 3245 2 to 497   capped   496/496
(100 %)
2 diff
(99.6 %id)
DA833036 placenta .c 2793 to 3504 2 to 716   tiling clone, capped   715/715
(100 %)
7 diff
(99.1 %id)
BM508073 insulinoma, Pancreas .c 2925 to 3555 649 to 17   AAA   633/633
(100 %)
7 diff
(98.9 %id)
BE245080 leukopheresis .c 2955 to 3555 601 to 1       601/601
(100 %)
7 diff
(98.9 %id)
W67627 heart .c 2985 to 3320 11 to 347   fully sequenced,   337/347
(97 %)
11 diff
(96.9 %id)
N34580 melanocyte .c 3045 to 3426 391 to 1       391/443
(88 %)
13 diff
(97.1 %id)
EL949598 eyeball .c 3059 to 3557 1 to 499   AAA   499/499
(100 %)
13 diff
(97.4 %id)
BI468574 insulinoma, Pancreas .c 3060 to 3555 506 to 13   AAA   494/494
(100 %)
13 diff
(97.4 %id)
N40368 melanocyte .c 3083 to 3344 1 to 262       262/262
(100 %)
0 diff
(100 %id)
N64581 cochlea, ear .c 3129 to 3560 450 to 13   AAA   438/438
(100 %)
7 diff
(98.5 %id)
AW150696 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3192 to 3557 366 to 1       366/366
(100 %)
0 diff
(100 %id)
BX508906   .c 3201 to 3856 1 to 666   tiling clone,   666/668
(99 %)
13 diff
(98.1 %id)
AI337735 brain, tumor, 5 pooled (see description) .c 3236 to 3563 343 to 16   AAA   328/328
(100 %)
0 diff
(100 %id)
W67576 heart .c 3290 to 3560 277 to 1   fully sequenced,   277/277
(100 %)
2 diff
(99.3 %id)
BF516462   .c 3355 to 3745 1 to 389     Submitted on the opposite strand 389/389
(100 %)
4 diff
(99.0 %id)
DA236223 brain .c 3415 to 3996 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
AA214424   .c 3439 to 3555 132 to 15   AAA   118/126
(93 %)
8 diff
(93.7 %id)
CN411497 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 3486 to 4158 1 to 672       672/672
(100 %)
3 diff
(99.6 %id)
BP873331 embryonal kidney .c 3588 to 4169 1 to 583       583/583
(100 %)
19 diff
(96.8 %id)
DA105140 cerebellum .c 3724 to 4282 2 to 561   tiling clone, capped   560/560
(100 %)
2 diff
(99.7 %id)
FN067144 breast carcinoma .c 3752 to 3816 67 to 3     Submitted on the opposite strand 65/68
(95 %)
4 diff
(94.2 %id)
AA017349.
matches multiple genes
eye, retina .c 3796 to 4033 1 to 239     also hits gene FAM36A 239/256
(93 %)
2 diff
(99.3 %id)
BF675702 Prostate .c 3803 to 4463 1 to 661       661/703
(94 %)
61 diff
(91.4 %id)
BF379359 uterus_tumor .c 3834 to 4112 290 to 16       275/290
(94 %)
0 diff
(100 %id)
BF379364 uterus_tumor .c 3834 to 4112 296 to 19       278/296
(93 %)
0 diff
(100 %id)
DA810629 brain .c 3850 to 4404 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA105665 cerebellum .c 3902 to 4444 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
BX486528   .c 3955 to 4637 1 to 679   tiling clone,   679/679
(100 %)
2 diff
(99.8 %id)
BP871953 embryonal kidney .c 3980 to 4292 1 to 315       315/380
(82 %)
16 diff
(95.8 %id)
DA387960 thalamus .c 4016 to 4513 2 to 500   tiling clone, capped   499/499
(100 %)
1 diff
(99.8 %id)
DB148377 thymus .c 4022 to 4582 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
EH351990   .c 4040 to 4114 1 to 75       75/75
(100 %)
0 diff
(100 %id)
BU567141 mixed (pool of 40 RNAs) .c 4050 to 4307 1 to 260   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 260/260
(100 %)
4 diff
(98.5 %id)
TI_149282920   .c 4186 to 4900 724 to 8       717/811
(88 %)
0 diff
(100 %id)
AW368634 head_neck .c 4263 to 4887 628 to 6       623/669
(93 %)
0 diff
(100 %id)
AW368633 head_neck .c 4333 to 4878 538 to 1       538/539
(99 %)
28 diff
(94.9 %id)
DB379573 placenta .c 4356 to 4879 521 to 1       521/588
(88 %)
7 diff
(98.9 %id)
CA975858 sciatic nerve .c 4362 to 5114 1 to 762       762/942
(80 %)
21 diff
(97.8 %id)
BQ717221 sympathetic trunk .c 4375 to 5247 1 to 877   tiling clone,   877/879
(99 %)
6 diff
(99.4 %id)
BF114679 pooled .c 4379 to 4892 514 to 1       514/514
(100 %)
2 diff
(99.7 %id)
BF727393 eye, lens .c 4399 to 4886 1 to 486   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 486/486
(100 %)
1 diff
(99.8 %id)
EH334995   .c 4426 to 4499 1 to 75       75/75
(100 %)
1 diff
(98.7 %id)
N27553 melanocyte .c 4442 to 4886 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
AI702169 carcinoid, lung .c 4493 to 4885 393 to 1       393/393
(100 %)
0 diff
(100 %id)
BP394494 pancreatic islet .c 4499 to 4893 1 to 400     Submitted on the opposite strand 400/400
(100 %)
6 diff
(98.5 %id)
AI245179 Kidney .c 4500 to 4886 388 to 1       388/392
(98 %)
1 diff
(99.8 %id)
AW368646 head_neck .c 4504 to 4869 367 to 1       367/367
(100 %)
5 diff
(98.7 %id)
AA249018   .c 4660 to 4899 1 to 240       240/244
(98 %)
14 diff
(94.3 %id)
DA817139   .c 4739 to 5309 2 to 571   tiling clone, capped   570/571
(99 %)
2 diff
(99.7 %id)
DA045828 bladder .c 5487 to 6026 2 to 541   tiling clone, capped   540/540
(100 %)
0 diff
(100 %id)
DA081425 cerebellum .c 5526 to 6097 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
CD639240 pooled .c 5586 to 6258 1 to 671       671/731
(91 %)
13 diff
(98.3 %id)
AA449997   .c 5597 to 5962 1 to 366     Submitted on the opposite strand 366/366
(100 %)
4 diff
(99.0 %id)
BF940173 brain, glioblastoma (pooled) .c 5628 to 6167 1 to 540     Submitted on the opposite strand 540/540
(100 %)
3 diff
(99.5 %id)
DA843871 placenta .c 5637 to 6201 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
AA385046 thyroid gland .c 5694 to 5967 1 to 274       274/274
(100 %)
0 diff
(100 %id)
BQ212445 melanotic melanoma, skin .c 5782 to 6567 1 to 792   tiling clone,   792/881
(89 %)
14 diff
(98.5 %id)
AA345925 gall bladder .c 5822 to 6100 1 to 280       280/281
(99 %)
3 diff
(99.0 %id)
AW964301   .c 5823 to 6426 1 to 611       611/613
(99 %)
13 diff
(97.9 %id)
AW964325   .c 5823 to 6418 1 to 596       596/596
(100 %)
5 diff
(99.2 %id)
AW967371   .c 5823 to 6494 1 to 670       670/670
(100 %)
23 diff
(96.6 %id)
BE568969 bladder, carcinoma, cell line .c 5839 to 6466 1 to 612       612/835
(73 %)
20 diff
(97.7 %id)
DN920017   .c 5885 to 6353 1 to 469       469/469
(100 %)
4 diff
(99.2 %id)
FN134151 breast carcinoma .c 5892 to 5984 10 to 101       92/101
(91 %)
6 diff
(94.1 %id)
BG428825 Kidney .c 5901 to 6593 1 to 694       694/694
(100 %)
5 diff
(99.3 %id)
BG619388 placenta .c 5905 to 6524 1 to 664       664/867
(76 %)
44 diff
(95.0 %id)
BQ890124 sympathetic trunk .c 5918 to 6662 1 to 748       748/858
(87 %)
15 diff
(98.3 %id)
AW062674 colon .c 5932 to 6516 51 to 627       577/674
(85 %)
25 diff
(96.3 %id)
BG261134 bladder, transitional cell papilloma, cell line .c 5935 to 6668 1 to 737       737/802
(91 %)
22 diff
(97.3 %id)
BE542110 cervix .c 5945 to 6655 1 to 710       710/718
(98 %)
33 diff
(95.5 %id)
BF248327 melanotic melanoma, high MDR, skin .c 6038 to 6730 1 to 688       688/846
(81 %)
30 diff
(96.5 %id)
BC014384 Kidney, hypernephroma .c 6043 to 7459 4 to 1420   available from MGC, AAA   1417/1417
(100 %)
3 diff
(99.8 %id)
N77134 multiple sclerosis lesions .c 6048 to 6341 1 to 297       297/297
(100 %)
3 diff
(99.0 %id)
BE708303 head_neck .c 6071 to 6278 213 to 6       208/213
(97 %)
0 diff
(100 %id)
BE181787 head_neck .c 6114 to 6436 323 to 1     Submitted on the opposite strand 323/323
(100 %)
5 diff
(98.5 %id)
CB132020 Liver .c 6116 to 6687 1 to 572       572/572
(100 %)
0 diff
(100 %id)
AW812976 stomach .c 6141 to 6688 552 to 1       552/552
(100 %)
9 diff
(98.4 %id)
BG777649 adenocarcinoma, Prostate .c 6142 to 6903 1 to 761       761/761
(100 %)
9 diff
(98.9 %id)
BF696675 brain, primitive neuroectoderm .c 6152 to 6677 1 to 529       529/877
(60 %)
9 diff
(99.0 %id)
BQ636554 eye, retina .c 6176 to 6797 1 to 622       622/622
(100 %)
6 diff
(99.1 %id)
BF674002 Prostate .c 6202 to 6763 1 to 568       568/1306
(43 %)
19 diff
(98.6 %id)
BM478727 melanotic melanoma, skin .c 6221 to 7125 1 to 912       912/1111
(82 %)
21 diff
(98.2 %id)
BE173576 head_neck .c 6291 to 6913 626 to 3     Submitted on the opposite strand 624/626
(99 %)
0 diff
(100 %id)
BF030207 hypernephroma, Kidney .c 6368 to 7023 1 to 647       647/846
(76 %)
21 diff
(97.6 %id)
BG427912 Kidney .c 6369 to 6869 99 to 619       521/738
(70 %)
6 diff
(99.2 %id)
ES311917 frontal balding hair, skin .c 6372 to 6569 1 to 198       198/198
(100 %)
2 diff
(99.0 %id)
FN124420 breast carcinoma .c 6381 to 6468 90 to 1     Submitted on the opposite strand 90/97
(92 %)
2 diff
(98.0 %id)
T27340   .c 6395 to 6569 1 to 175       175/175
(100 %)
4 diff
(97.8 %id)
AA173498   .c 6412 to 6714 1 to 304       304/304
(100 %)
1 diff
(99.7 %id)
AK056974 skeletal muscle .c 6422 to 7459 1 to 1038   tiling clone, available from FLJ,   1038/1038
(100 %)
0 diff
(100 %id)
DA893558 skeletal muscle .c 6423 to 6961 2 to 540   fully sequenced, capped   539/539
(100 %)
1 diff
(99.9 %id)
CN289634 embryonic stem cells, DMSO-treated H9 cellline .c 6442 to 7188 1 to 747       747/747
(100 %)
0 diff
(100 %id)
BG319449 skin .c 6451 to 6856 406 to 1     Submitted on the opposite strand 406/406
(100 %)
0 diff
(100 %id)
BG528217 lung, mucoepidermoid carcinoma .c 6451 to 7174 1 to 720       720/808
(89 %)
22 diff
(97.3 %id)
BM831806 stomach .c 6517 to 6878 1 to 362       362/362
(100 %)
0 diff
(100 %id)
BF213848 bone marrow, from acute myelogenous leukemia .c 6526 to 6846 1 to 320       320/350
(91 %)
12 diff
(96.6 %id)
BF793526 adrenal cortex carcinoma, cell line, adrenal gland .c 6560 to 7225 1 to 664       664/664
(100 %)
4 diff
(99.4 %id)
DA468932   .c 6566 to 7134 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BU568112 testis .c 6610 to 7359 1 to 760       760/761
(99 %)
16 diff
(97.9 %id)
BG117723 adenocarcinoma, cell line, Liver .c 6611 to 7369 1 to 750       750/807
(92 %)
17 diff
(97.9 %id)
BU680608 lung, Primary Lung Epithelial Cells .c 6613 to 7237 14 to 636     Submitted on the opposite strand 623/636
(97 %)
4 diff
(99.4 %id)
BM969779 lung, Primary Lung Epithelial Cells .c 6613 to 7145 14 to 545     Submitted on the opposite strand 532/545
(97 %)
1 diff
(99.9 %id)
AA284351 germinal center B cell .c 6627 to 7068 1 to 441   fully sequenced,   441/441
(100 %)
1 diff
(99.8 %id)
BG618082 Liver .c 6656 to 7406 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
FN167214 breast carcinoma .c 6669 to 6760 1 to 89       89/91
(97 %)
7 diff
(92.4 %id)
TI_149295695   .c 6708 to 7454 843 to 105   AAA   739/909
(81 %)
24 diff
(97.4 %id)
AW993517 breast_normal .c 6730 to 7169 450 to 11     Submitted on the opposite strand 440/593
(74 %)
0 diff
(100 %id)
CA413225 Chondrosarcoma Grade II, Left Pelvis .c 6763 to 7459 714 to 19   AAA   696/696
(100 %)
2 diff
(99.8 %id)
BX099831 uterus .c 6775 to 7450 1 to 676       676/676
(100 %)
1 diff
(99.9 %id)
AA037683 uterus .c 6775 to 6983 1 to 209       209/209
(100 %)
0 diff
(100 %id)
FN172551 breast carcinoma .c 6788 to 6893 107 to 1     Submitted on the opposite strand 107/108
(99 %)
3 diff
(97.3 %id)
CA310449 cell lines, Chondrosarcoma .c 6797 to 7454 677 to 19   AAA   659/659
(100 %)
2 diff
(99.7 %id)
CB139611 Liver .c 6798 to 7264 1 to 467       467/467
(100 %)
0 diff
(100 %id)
CA426902 cell lines, Chondrosarcoma .c 6846 to 7454 627 to 19   AAA   609/609
(100 %)
1 diff
(99.9 %id)
D62588   .c 6874 to 7273 1 to 400       400/400
(100 %)
0 diff
(100 %id)
BM990079 lung, Lung Focal Fibrosis .c 6876 to 7468 611 to 19   AAA   593/593
(100 %)
1 diff
(99.9 %id)
BU683826 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 6879 to 7454 594 to 19   AAA   576/576
(100 %)
0 diff
(100 %id)
AW274627 brain, three pooled meningiomas .c 6886 to 7394 513 to 4       510/513
(99 %)
0 diff
(100 %id)
BG500396 adenocarcinoma, Prostate .c 6903 to 7454 1 to 554   AAA   554/554
(100 %)
4 diff
(99.3 %id)
DB327703   .c 6904 to 7459 556 to 1       556/556
(100 %)
0 diff
(100 %id)
DB325221   .c 6910 to 7454 545 to 1       545/545
(100 %)
0 diff
(100 %id)
BF032048 hypernephroma, Kidney .c 6911 to 7377 1 to 466       466/692
(67 %)
9 diff
(98.7 %id)
AW613331 2 pooled high-grade transitional celltumors, genitourinary tract .c 6913 to 7459 559 to 13   AAA   547/547
(100 %)
0 diff
(100 %id)
AI686390 Prostate .c 6922 to 7462 553 to 13   AAA   541/541
(100 %)
2 diff
(99.7 %id)
TI_154005849   .c 6924 to 7454 649 to 121       529/659
(80 %)
0 diff
(100 %id)
DB330905 skeletal muscle .c 6931 to 7459 529 to 1   fully sequenced,   529/529
(100 %)
0 diff
(100 %id)
AI634827 Kidney .c 6954 to 7460 510 to 4       507/510
(99 %)
0 diff
(100 %id)
CR594208 T cells (Jurkat cell line) .c 6981 to 7394 1 to 414       414/414
(100 %)
0 diff
(100 %id)
BX462587 T cells (Jurkat cell line) .c 6981 to 7394 1 to 414       414/414
(100 %)
2 diff
(99.6 %id)
AA974512 colon, colon tumor .c 6981 to 7460 480 to 1       480/480
(100 %)
2 diff
(99.6 %id)
DN920016   .c 6984 to 7459 478 to 3       476/478
(99 %)
0 diff
(100 %id)
N66872 cochlea, ear .c 6984 to 7393 411 to 1       411/411
(100 %)
2 diff
(99.6 %id)
BF088874 head_neck .c 6987 to 7183 198 to 6       193/198
(97 %)
0 diff
(100 %id)
BQ023307 placenta .c 7002 to 7459 477 to 20   AAA   458/458
(100 %)
1 diff
(99.8 %id)
AW798871 uterus .c 7008 to 7348 1 to 341       341/341
(100 %)
10 diff
(97.1 %id)
CB047023 2 pooled tumors (clear cell type), Kidney .c 7010 to 7465 9 to 464       456/464
(98 %)
6 diff
(98.8 %id)
AI912260 carcinoid, lung .c 7012 to 7441 430 to 1       430/430
(100 %)
1 diff
(99.8 %id)
AI073519 pooled .c 7013 to 7459 457 to 11   AAA   447/447
(100 %)
1 diff
(99.8 %id)
FN090482 breast carcinoma .c 7018 to 7086 69 to 1     Submitted on the opposite strand 69/70
(98 %)
0 diff
(100 %id)
N62188 multiple sclerosis lesions .c 7020 to 7466 453 to 1       453/457
(99 %)
11 diff
(97.6 %id)
AW070499 pooled .c 7023 to 7460 443 to 6       438/443
(98 %)
0 diff
(100 %id)
FN047612 breast carcinoma .c 7054 to 7115 1 to 62       62/63
(98 %)
3 diff
(95.3 %id)
AA284352 germinal center B cell .c 7055 to 7466 412 to 1   fully sequenced,   412/412
(100 %)
0 diff
(100 %id)
AI284256 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 7087 to 7465 381 to 3       379/381
(99 %)
0 diff
(100 %id)
AA729795 pooled germ cell tumors .c 7100 to 7467 368 to 1       368/368
(100 %)
0 diff
(100 %id)
AA173442   .c 7104 to 7431 329 to 1       329/329
(100 %)
2 diff
(99.4 %id)
AI640437 Kidney .c 7112 to 7454 353 to 11   AAA   343/343
(100 %)
0 diff
(100 %id)
C06433   .c 7123 to 7472 353 to 1       353/367
(96 %)
6 diff
(98.4 %id)
AW795598 uterus .c 7138 to 7393 1 to 254       254/257
(98 %)
9 diff
(96.5 %id)
DB328549 placenta .c 7154 to 7704 552 to 1       552/552
(100 %)
2 diff
(99.7 %id)
DB299437 cerebellum .c 7166 to 7459 294 to 1       294/294
(100 %)
0 diff
(100 %id)
AI023000 parathyroid gland, parathyroid tumor .c 7178 to 7459 292 to 11   AAA   282/282
(100 %)
5 diff
(98.3 %id)
AI590226 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 7180 to 7688 534 to 26   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 509/509
(100 %)
6 diff
(98.9 %id)
AI935348 Kidney .c 7181 to 7708 530 to 1   tiling clone,   530/530
(100 %)
3 diff
(99.5 %id)
AI022992 parathyroid gland, parathyroid tumor .c 7189 to 7459 281 to 11   AAA   271/271
(100 %)
0 diff
(100 %id)
D20819   .c 7193 to 7460 1 to 268     Submitted on the opposite strand 268/270
(99 %)
2 diff
(99.3 %id)
BQ023820 placenta .c 7210 to 7459 268 to 19   AAA   250/250
(100 %)
0 diff
(100 %id)
BF876691 lung_tumor .c 7219 to 7637 428 to 1     Submitted on the opposite strand 428/428
(100 %)
22 diff
(94.9 %id)
EH320319   .c 7244 to 7333 1 to 89       89/90
(98 %)
5 diff
(94.5 %id)
FN166003 breast carcinoma .c 7252 to 7359 110 to 1     Submitted on the opposite strand 110/114
(96 %)
2 diff
(98.3 %id)
FN162339 breast carcinoma .c 7259 to 7366 1 to 108       108/108
(100 %)
0 diff
(100 %id)
AA037684 uterus .c 7262 to 7701 440 to 1       440/440
(100 %)
0 diff
(100 %id)
TI_159719430   .c 7269 to 7688 63 to 482   AAA Submitted on the opposite strand 420/482
(87 %)
6 diff
(98.8 %id)
CB852800 Human Lung Epithelial cells, lung .c 7269 to 7688 16 to 435   AAA Submitted on the opposite strand 420/435
(96 %)
8 diff
(98.2 %id)
BF197815 skin, normal, 4 pooled samples .c 7287 to 7689 405 to 3       403/405
(99 %)
0 diff
(100 %id)
BQ023749 placenta .c 7307 to 7704 416 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 398/398
(100 %)
4 diff
(99.0 %id)
FN138370 breast carcinoma .c 7313 to 7385 1 to 72       72/73
(98 %)
2 diff
(97.3 %id)
AI242698 colon, moderately-differentiated adenocarcinoma .c 7320 to 7467 150 to 3       148/150
(98 %)
0 diff
(100 %id)
AI800684 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 7320 to 7688 392 to 24   AAA   369/375
(98 %)
0 diff
(100 %id)
FN092095 breast carcinoma .c 7325 to 7422 94 to 1     Submitted on the opposite strand 94/99
(94 %)
4 diff
(96.0 %id)
AI500676 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 7338 to 7704 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AA988291 2 pooled tumors (clear cell type), Kidney .c 7437 to 7703 275 to 9       267/275
(97 %)
0 diff
(100 %id)
AI474827 Kidney .c 7512 to 7688 177 to 1       177/177
(100 %)
0 diff
(100 %id)
BQ024443 placenta .c 7546 to 7704 177 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 159/159
(100 %)
1 diff
(99.4 %id)
BQ574641 Chondrosarcoma Grade II, Left Pelvis .d 1 to 677 695 to 19 L21X tiling clone, AAA   677/677
(100 %)
0 diff
(100 %id)
CA431058 cell lines, Chondrosarcoma .d 10 to 675 684 to 19   AAA   666/666
(100 %)
2 diff
(99.7 %id)
BG721819 testis .e 1 to 702 1 to 699 F41L V42F L43C P44L L45F ... tiling clone,   699/699
(100 %)
28 diff
(96.0 %id)
CN289166 embryonic stem cells, DMSO-treated H9 cellline .e 639 to 1266 1 to 628   tiling clone,   628/628
(100 %)
3 diff
(99.6 %id)
DB008266 cervix, tumor tissue .f 1 to 507 2 to 508   tiling clone, capped   507/507
(100 %)
0 diff
(100 %id)
AK308501 bladder .f 15 to 1561 1 to 1547 exact tiling clone,   1547/1547
(100 %)
1 diff
(100.0 %id)
DC300682 bladder .f 15 to 582 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BX487654   .g-u 1 to 637 1 to 634 P5Q I6S R7G N8M G9A ... tiling clone,   634/634
(100 %)
6 diff
(99.1 %id)
BF057015 pooled germ cell tumors .h 1 to 617 617 to 1 exact tiling clone,   617/617
(100 %)
4 diff
(99.4 %id)
BF913492 uterus_tumor .i 1 to 577 1 to 579 G11R F33Y F41Y E56R R57E ... tiling clone,   579/579
(100 %)
22 diff
(96.3 %id)
DA434244 tongue, tumor tissue .j-u 1 to 475 2 to 476 exact tiling clone, capped   475/475
(100 %)
1 diff
(99.8 %id)
AL699484 human skeletal muscle .j-u 29 to 523 10 to 504 exact tiling clone,   495/495
(100 %)
1 diff
(99.8 %id)
AA453135   .k 1 to 289 289 to 1 exact tiling clone, Submitted on the opposite strand 289/289
(100 %)
0 diff
(100 %id)
AV702036 adrenal gland Gene TMEM33, variant not shown         Suspected internal deletion, this clone was ignored    
AK094190   Gene TMEM33, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DB295817   Gene TMEM33, variant not shown         Suspected internal deletion, this clone was ignored    
DA032240   Gene TMEM33, variant not shown       capped Suspected internal deletion, this clone was ignored    
AY659966 prostate; breast cancer Gene TMEM33, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DA495772 brain Gene TMEM33, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA509675 brain Gene TMEM33, variant not shown       capped Suspected internal deletion, this clone was ignored    
DR423617 eye, Pterygium Gene TMEM33, variant not shown         Suspected internal deletion, this clone was ignored    
BM667017 eye, fetal eyes Gene TMEM33, variant not shown       fully sequenced, AAA This clone was ignored    
BM698307 eye, fetal eyes Gene TMEM33, variant not shown       fully sequenced, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI