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Gene SGMS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
270 supporting clones for gene SGMS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX405356 T cells (Jurkat cell line) .a 1 to 1011 1 to 999   tiling clone,   999/1004
(99 %)
20 diff
(98.1 %id)
BX405355 T cells (Jurkat cell line) .a 2315 to 3399 1080 to 10   tiling clone,   1071/1080
(99 %)
0 diff
(100 %id)
CR603488 B cells (Ramos cell line) Cot 25-normalized .b 1 to 2375 1 to 2375 exact tiling clone,   2375/2375
(100 %)
0 diff
(100 %id)
AL560778 B cells from Burkitt lymphoma .b 1 to 987 1 to 987       987/987
(100 %)
1 diff
(99.9 %id)
NM_147156.3   .c 1 to 3751 2 to 3752 exact RefSeq, AAA   3752/3752
(100 %)
0 diff
(100 %id)
BM764008 myeloma .c 1 to 634 2 to 634       634/634
(100 %)
1 diff
(99.9 %id)
BM847630 myeloma .c 1 to 548 2 to 546       546/549
(99 %)
5 diff
(99.1 %id)
DA211727 brain .c 1 to 477 2 to 478   tiling clone, capped   477/477
(100 %)
0 diff
(100 %id)
DA226377 brain .c 9 to 540 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA041230 bladder .c 13 to 467 2 to 458   capped   457/548
(83 %)
8 diff
(98.6 %id)
DA119320 cerebellum .c 13 to 233 2 to 223   capped   222/222
(100 %)
1 diff
(99.6 %id)
DA127431 cerebellum .c 13 to 584 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA193628 amygdala .c 13 to 583 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA456711 tongue, tumor tissue .c 13 to 563 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA479874   .c 13 to 477 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
DA778594 brain .c 13 to 587 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA858650 placenta .c 13 to 556 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB240815 trachea .c 13 to 594 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB225221 trachea .c 17 to 600 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA325356 hippocampus .c 21 to 455 12 to 446   capped   435/445
(97 %)
5 diff
(98.9 %id)
BM561938 leukocyte .c 30 to 1075 16 to 1077       1062/1079
(98 %)
56 diff
(94.9 %id)
TI_57215214   .c 30 to 722 64 to 755       692/769
(89 %)
8 diff
(99.0 %id)
DB219376 trachea .c 30 to 605 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
AY280959 Liver .c 34 to 3751 1 to 3718 exact     3718/3718
(100 %)
3 diff
(100.0 %id)
DA160464 amygdala .c 34 to 595 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BI752115 brain .c 34 to 722 1 to 688       688/702
(98 %)
2 diff
(99.8 %id)
DA233711 brain .c 44 to 622 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA283379 corpus callosum .c 44 to 600 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CN314427 embryonic stem cells, cell lines H1, H7, andH9 .c 50 to 669 1 to 620       620/620
(100 %)
0 diff
(100 %id)
DA049217   .c 52 to 655 2 to 605   capped   604/604
(100 %)
2 diff
(99.7 %id)
DA108054 cerebellum .c 55 to 620 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA217047 brain .c 55 to 576 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA226902 brain .c 55 to 613 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA239720 brain .c 55 to 627 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA644290   .c 55 to 629 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA668855 esophagus .c 55 to 376 2 to 323   capped   322/322
(100 %)
0 diff
(100 %id)
DA718167   .c 55 to 556 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DB159676 thymus .c 55 to 643 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB222860 trachea .c 55 to 613 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB234744 trachea .c 55 to 571 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DB285001 uterus .c 55 to 598 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB453148 testis .c 58 to 467 1 to 410       410/491
(83 %)
6 diff
(98.8 %id)
DB068806 testis .c 58 to 609 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CF593257 Human Placenta, placenta .c 63 to 456 29 to 425       397/686
(57 %)
8 diff
(98.9 %id)
DA216848 brain .c 64 to 576 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA316092 hippocampus .c 64 to 556 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
DA329782 hippocampus .c 67 to 540 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DA354834 substantia nigra .c 70 to 628 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA577562   .c 72 to 631 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BX337924 Placenta Cot 25-normalized .c 74 to 456 1 to 383       383/383
(100 %)
3 diff
(99.3 %id)
CN289710 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 103 to 443 1 to 341       341/341
(100 %)
0 diff
(100 %id)
CN361236 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 107 to 913 9 to 815       807/815
(99 %)
2 diff
(99.8 %id)
AY332650   .c 125 to 1803 1 to 1679   tiling clone,   1679/1679
(100 %)
0 diff
(100 %id)
DA321923 hippocampus .c 214 to 777 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DR005465 Prostate .c 246 to 886 1 to 641       641/641
(100 %)
0 diff
(100 %id)
DN996115 breast cancer, Mammary gland (cancer tissue) .c 256 to 880 9 to 633       625/633
(98 %)
0 diff
(100 %id)
BX403213 Placenta Cot 25-normalized .c 351 to 1267 1 to 915       915/922
(99 %)
16 diff
(98.3 %id)
DB226641 trachea .c 364 to 958 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA186629 amygdala .c 474 to 1017 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA815106   .c 480 to 1038 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AK026683 Human lung .c 537 to 2767 1 to 2231 exact available from FLJ, AAA   2231/2231
(100 %)
4 diff
(99.9 %id)
BM726078 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 572 to 1211 1 to 640       640/640
(100 %)
0 diff
(100 %id)
TI_151729415   .c 572 to 1244 719 to 47       673/1008
(66 %)
1 diff
(100.0 %id)
AB154421   .c 617 to 2563 1 to 1947 exact AAA   1947/1947
(100 %)
1 diff
(100.0 %id)
BC042899 Lymph, lymphoma .c 739 to 3751 1 to 3013 exact tiling clone, available from MGC, AAA   3013/3013
(100 %)
3 diff
(100.0 %id)
AY312431 testis .c 808 to 2343 1 to 1536 P162L     1536/1536
(100 %)
2 diff
(99.9 %id)
BF530258 anaplastic oligodendroglioma with 1p/19qloss, brain .c 872 to 1630 1 to 770       770/810
(95 %)
28 diff
(96.6 %id)
EL734236 mixed .c 954 to 1638 1 to 684       684/684
(100 %)
2 diff
(99.8 %id)
BX350568   .c 1226 to 2112 883 to 1       883/886
(99 %)
7 diff
(99.3 %id)
AL046841 uterus .c 1250 to 1654 1 to 405       405/405
(100 %)
1 diff
(99.8 %id)
DB480979 hippocampus .c 1344 to 1819 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
BQ638266 eye, retina .c 1412 to 1914 1 to 503       503/503
(100 %)
0 diff
(100 %id)
DA678004   .c 1451 to 2043 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DA665341   .c 1481 to 1894 2 to 415   capped   414/414
(100 %)
0 diff
(100 %id)
BG400959 Kidney .c 1489 to 1988 1 to 504       504/753
(66 %)
7 diff
(99.1 %id)
CK001054 brain/CNS, Bulk tissue from Human Spinal cord .c 1511 to 2142 1 to 631       631/633
(99 %)
7 diff
(98.9 %id)
BG194564   .c 1579 to 2275 1 to 696       696/702
(99 %)
5 diff
(99.3 %id)
BG221478   .c 1579 to 2275 1 to 699       699/748
(93 %)
46 diff
(93.9 %id)
BG196121   .c 1583 to 2274 701 to 13     Submitted on the opposite strand 689/704
(97 %)
24 diff
(96.6 %id)
DA350434 substantia nigra .c 1584 to 2155 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BG617699 Liver .c 1726 to 2356 1 to 637       637/896
(71 %)
18 diff
(98.0 %id)
BF211992 bone marrow, from chronic myelogenous leukemia .c 1745 to 2281 1 to 534       536/855
(62 %)
33 diff
(96.2 %id)
BF212739 bone marrow, from chronic myelogenous leukemia .c 1759 to 2378 1 to 625       625/838
(74 %)
28 diff
(96.7 %id)
AI566086 Kidney .c 1782 to 2403 621 to 1       621/621
(100 %)
4 diff
(99.4 %id)
BG504895 embryonal carcinoma, testis .c 1821 to 2541 1 to 721       721/722
(99 %)
13 diff
(98.2 %id)
AA313209 colon .c 1825 to 2327 1 to 503       503/503
(100 %)
0 diff
(100 %id)
DA373980 thalamus .c 1825 to 2399 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
AW402313 lymph .c 1863 to 2285 1 to 423       423/423
(100 %)
4 diff
(99.1 %id)
TI_154138656   .c 1870 to 2379 80 to 594       515/519
(99 %)
18 diff
(96.6 %id)
AA282777 germinal center B cell .c 1893 to 2325 1 to 433       433/433
(100 %)
0 diff
(100 %id)
AW118667 pooled .c 1917 to 2403 501 to 15   AAA   487/487
(100 %)
5 diff
(99.0 %id)
BF695943 brain, primitive neuroectoderm .c 1925 to 2619 1 to 693       693/856
(80 %)
32 diff
(96.3 %id)
AA693488   .c 1935 to 2404 472 to 3       470/472
(99 %)
0 diff
(100 %id)
BQ309338 breast .c 1938 to 2158 234 to 12       223/234
(95 %)
4 diff
(98.3 %id)
BQ309399 breast .c 1938 to 2158 234 to 12       223/234
(95 %)
4 diff
(98.3 %id)
DA356755 subthalamic nucleus .c 1994 to 2564 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB508106 testis .c 1997 to 2401 1 to 407     Submitted on the opposite strand 407/409
(99 %)
5 diff
(98.8 %id)
BU930515 Prostate .c 2014 to 2748 1 to 743       743/818
(90 %)
15 diff
(98.2 %id)
BQ309318 breast .c 2016 to 2201 46 to 231       186/231
(80 %)
6 diff
(97.5 %id)
BQ309379 breast .c 2016 to 2201 46 to 231       186/231
(80 %)
6 diff
(97.5 %id)
BQ355563 head_neck .c 2016 to 2334 30 to 348       319/348
(91 %)
6 diff
(98.3 %id)
AL560777 B cells from Burkitt lymphoma .c 2016 to 2989 973 to 1       973/1023
(95 %)
6 diff
(99.5 %id)
BG998431 head_neck .c 2021 to 2263 248 to 6       243/248
(97 %)
0 diff
(100 %id)
BQ355562 head_neck .c 2021 to 2284 266 to 2       265/266
(99 %)
0 diff
(100 %id)
BU175397 large cell carcinoma, lung .c 2024 to 2874 19 to 871       853/935
(91 %)
27 diff
(97.2 %id)
BQ355205 head_neck .c 2028 to 2340 312 to 2       311/312
(99 %)
0 diff
(100 %id)
AV726734 hypothalamus .c 2099 to 2780 1 to 679       679/679
(100 %)
8 diff
(98.9 %id)
BM422373 testis .c 2108 to 2383 309 to 32   AAA Submitted on the opposite strand 278/278
(100 %)
4 diff
(98.6 %id)
AA770138   .c 2119 to 2401 287 to 5       283/287
(98 %)
0 diff
(100 %id)
M85810   .c 2154 to 2457 304 to 1       304/304
(100 %)
0 diff
(100 %id)
Y14155 brain .c 2169 to 3733 1 to 1567       1567/1567
(100 %)
5 diff
(99.7 %id)
BI222508 cervical carcinoma cell line, cervix .c 2171 to 2920 1 to 756       756/756
(100 %)
11 diff
(98.6 %id)
CN361235 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 2184 to 2481 1 to 298       298/298
(100 %)
0 diff
(100 %id)
BF055346 pooled .c 2232 to 2777 546 to 1       546/546
(100 %)
0 diff
(100 %id)
N56537   .c 2266 to 2522 1 to 256       256/267
(95 %)
8 diff
(97.1 %id)
AA412564.
matches multiple genes
  .c 2324 to 2744 1 to 421     also hits gene LOC643988 421/421
(100 %)
2 diff
(99.6 %id)
AI248735 liver and spleen .c 2422 to 2776 355 to 1       355/355
(100 %)
4 diff
(98.9 %id)
TI_151800771   .c 2425 to 3198 112 to 893       782/894
(87 %)
6 diff
(99.4 %id)
EL593859 epidermis, skin .c 2441 to 2895 9 to 456       448/546
(82 %)
14 diff
(97.5 %id)
EL593871 epidermis, skin .c 2441 to 2903 9 to 463       455/565
(80 %)
17 diff
(97.0 %id)
EL593891 epidermis, skin .c 2441 to 2965 547 to 23     Submitted on the opposite strand 525/555
(94 %)
0 diff
(100 %id)
EL593894 epidermis, skin .c 2441 to 2965 549 to 23     Submitted on the opposite strand 527/557
(94 %)
0 diff
(100 %id)
EH344340   .c 2461 to 2528 1 to 68       68/68
(100 %)
2 diff
(97.1 %id)
BG484174 lung .c 2461 to 3110 1 to 641       641/641
(100 %)
10 diff
(98.5 %id)
CD724285 eye, lacrimal gland .c 2555 to 3067 1 to 514       514/514
(100 %)
7 diff
(98.7 %id)
BM719304 eye, fetal eye .c 2625 to 3243 1 to 619   fully sequenced,   619/619
(100 %)
1 diff
(99.9 %id)
AW020183 cochlea, ear .c 2670 to 3014 2 to 346   fully sequenced,   345/346
(99 %)
5 diff
(98.6 %id)
CK819924 Islets of Langerhans, Pancreas .c 2674 to 3247 1 to 574       574/574
(100 %)
0 diff
(100 %id)
CK429221 eye, lacrimal gland .c 2689 to 3309 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BM142153 Islets of Langerhans, Pancreas .c 2690 to 3249 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BM142014 Islets of Langerhans, Pancreas .c 2690 to 3246 1 to 557   fully sequenced,   557/557
(100 %)
0 diff
(100 %id)
AA532941 normal prostatic epithelial cells, Prostate .c 2716 to 3213 8 to 501       494/506
(97 %)
8 diff
(98.5 %id)
BX100591 ovarian tumor, ovary .c 2721 to 3426 1 to 706       706/706
(100 %)
0 diff
(100 %id)
AA459523 ovarian tumor, ovary .c 2721 to 3164 1 to 444       444/444
(100 %)
0 diff
(100 %id)
BF666637 brain, primitive neuroectoderm .c 2737 to 3396 1 to 652       652/844
(77 %)
19 diff
(97.8 %id)
BE958326 brain, primitive neuroectoderm .c 2758 to 3371 1 to 606       606/833
(72 %)
19 diff
(97.8 %id)
CK431035 eye, lacrimal gland .c 2778 to 3335 1 to 558       558/558
(100 %)
0 diff
(100 %id)
TI_154039438   .c 2840 to 3734 969 to 80   AAA   890/974
(91 %)
18 diff
(98.2 %id)
TI_149293714   .c 2844 to 3617 855 to 86   AAA   770/970
(79 %)
5 diff
(99.5 %id)
TI_149294526   .c 2846 to 3617 856 to 88   AAA   769/963
(79 %)
3 diff
(99.7 %id)
BM975249 lung .c 2853 to 3617 779 to 19   AAA   761/761
(100 %)
5 diff
(99.4 %id)
TI_149313264   .c 2886 to 3618 844 to 113   AAA   732/958
(76 %)
71 diff
(92.6 %id)
BM985052 lung .c 2917 to 3617 718 to 19   AAA   700/700
(100 %)
1 diff
(99.9 %id)
BQ439055 embryonal carcinoma, cell line, testis .c 2922 to 3729 1 to 809       809/883
(91 %)
6 diff
(99.4 %id)
BI491220 cochlea, ear .c 2984 to 3618 653 to 19   fully sequenced, AAA   635/635
(100 %)
1 diff
(99.9 %id)
AA639099 Ewing's sarcoma .c 2991 to 3336 1 to 346       346/346
(100 %)
3 diff
(99.2 %id)
BQ002736 Chondrosarcoma, Left Pelvis .c 2993 to 3734 751 to 14   AAA   738/738
(100 %)
5 diff
(99.4 %id)
N78471 multiple sclerosis lesions .c 2995 to 3185 1 to 195       195/195
(100 %)
8 diff
(95.9 %id)
CA445147 lung, Metastatic Chondrosarcoma .c 3031 to 3734 716 to 14   AAA   703/703
(100 %)
2 diff
(99.8 %id)
CB164172 Liver .c 3087 to 3701 1 to 616       616/616
(100 %)
2 diff
(99.7 %id)
N45709 multiple sclerosis lesions .c 3103 to 3427 1 to 330       330/336
(98 %)
14 diff
(95.9 %id)
AI377497   .c 3122 to 3617 502 to 7       496/502
(98 %)
0 diff
(100 %id)
AI472086 pooled .c 3162 to 3731 570 to 1       570/570
(100 %)
1 diff
(99.9 %id)
DB541946 hippocampus .c 3165 to 3618 1 to 454   AAA Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
AI261602 Kidney .c 3173 to 3618 463 to 18   AAA   446/446
(100 %)
1 diff
(99.8 %id)
AI436076 pooled .c 3173 to 3618 450 to 5       446/450
(99 %)
0 diff
(100 %id)
AI580321 Kidney .c 3173 to 3610 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
BM141853 Islets of Langerhans, Pancreas .c 3174 to 3737 568 to 5   tiling clone,   564/568
(99 %)
0 diff
(100 %id)
AI689401 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3181 to 3618 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
AI281466 follicular lymphoma, lymph node .c 3187 to 3617 431 to 1       431/431
(100 %)
2 diff
(99.6 %id)
BM148623 leukopheresis .c 3209 to 3617 428 to 21   AAA   408/409
(99 %)
13 diff
(96.9 %id)
BM683237 eye, fetal eye .c 3213 to 3729 535 to 19   fully sequenced, AAA   517/517
(100 %)
0 diff
(100 %id)
D62356   .c 3223 to 3591 1 to 363       363/365
(99 %)
8 diff
(97.9 %id)
BM141740 Islets of Langerhans, Pancreas .c 3241 to 3737 501 to 5   fully sequenced,   497/501
(99 %)
0 diff
(100 %id)
AW273195 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3255 to 3734 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BQ023195 placenta .c 3256 to 3729 492 to 19   AAA   474/474
(100 %)
0 diff
(100 %id)
AA412421.
matches multiple genes
  .c 3257 to 3617 368 to 8     also hits gene C1orf158 361/368
(98 %)
0 diff
(100 %id)
AW337123 adenocarcinoma, Pancreas .c 3267 to 3731 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AA459293 ovarian tumor, ovary .c 3271 to 3731 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI358335 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 3271 to 3617 347 to 1       347/347
(100 %)
0 diff
(100 %id)
DB314914   .c 3273 to 3734 463 to 1       463/463
(100 %)
4 diff
(99.2 %id)
D79273 aorta .c 3273 to 3573 1 to 303       303/303
(100 %)
10 diff
(96.7 %id)
D61889   .c 3273 to 3544 1 to 271       271/271
(100 %)
1 diff
(99.7 %id)
D62005   .c 3273 to 3495 1 to 223       223/223
(100 %)
1 diff
(99.6 %id)
D62062   .c 3273 to 3570 1 to 298       298/298
(100 %)
2 diff
(99.4 %id)
D62165   .c 3273 to 3655 1 to 383       383/383
(100 %)
2 diff
(99.5 %id)
AI452820 pooled .c 3273 to 3618 360 to 15   AAA   346/346
(100 %)
0 diff
(100 %id)
DB549789 hippocampus .c 3282 to 3757 1 to 477   tiling clone, Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
AW264773 lung, two pooled squamous cell carcinomas .c 3283 to 3630 349 to 2       348/349
(99 %)
0 diff
(100 %id)
BU754070 placenta .c 3308 to 3729 440 to 19   AAA   422/422
(100 %)
2 diff
(99.6 %id)
H04642 placenta .c 3319 to 3712 392 to 1       392/393
(99 %)
2 diff
(99.5 %id)
AW974347   .c 3322 to 3729 540 to 132   AAA Submitted on the opposite strand 409/409
(100 %)
4 diff
(99.1 %id)
BQ024370 placenta .c 3324 to 3618 313 to 19   AAA   295/295
(100 %)
0 diff
(100 %id)
AA283079 germinal center B cell .c 3339 to 3667 329 to 1       329/329
(100 %)
0 diff
(100 %id)
BF445288 sympathetic trunk .c 3347 to 3735 389 to 1       389/389
(100 %)
0 diff
(100 %id)
C01454   .c 3349 to 3617 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
D62765   .c 3362 to 3719 1 to 357       357/367
(97 %)
3 diff
(99.2 %id)
AI278714 adenocarcinoma, colon .c 3384 to 3734 351 to 1       351/351
(100 %)
0 diff
(100 %id)
AI370245 follicular lymphoma, lymph node .c 3397 to 3617 222 to 2       221/222
(99 %)
0 diff
(100 %id)
D61766   .c 3454 to 3734 1 to 280       280/280
(100 %)
1 diff
(99.7 %id)
AI587064 adenocarcinoma, Pancreas .c 3538 to 3734 235 to 39   AAA   197/197
(100 %)
9 diff
(95.5 %id)
EC553359 Prostate .c 3542 to 3617 1 to 75       75/77
(97 %)
2 diff
(97.5 %id)
N73630 multiple sclerosis lesions .c 3559 to 3734 176 to 1       176/181
(97 %)
0 diff
(100 %id)
CK819923 Islets of Langerhans, Pancreas .c 3570 to 3737 174 to 5       170/174
(97 %)
0 diff
(100 %id)
AK296233 thalamus .d 1 to 1148 2 to 1149 exact tiling clone,   1149/1149
(100 %)
0 diff
(100 %id)
DA388565 thalamus .d 1 to 571 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB443223 testis .e 1 to 479 2 to 478   tiling clone,   478/478
(100 %)
9 diff
(98.2 %id)
DB051955 testis .e 1 to 557 2 to 559   tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
AW137650   .e 251 to 753 505 to 3       503/505
(99 %)
0 diff
(100 %id)
AL046079 testis .e 280 to 846 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DB473182 hippocampus .e 296 to 648 1 to 353       353/353
(100 %)
5 diff
(98.6 %id)
FM210200 cerebellum .e 334 to 1346 1 to 1013 exact tiling clone,   1013/1013
(100 %)
0 diff
(100 %id)
BF350114 head_neck .e 402 to 854 1 to 454       454/479
(94 %)
14 diff
(97.1 %id)
BI740300 Kidney .e 463 to 741 1 to 279       279/279
(100 %)
1 diff
(99.7 %id)
CN361234 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 507 to 853 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
DC417348 trachea .f-u 1 to 561 1 to 561   tiling clone,   561/561
(100 %)
0 diff
(100 %id)
DC409560 thymus .f-u 12 to 577 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BX484842   .f-u 22 to 504 1 to 483       483/483
(100 %)
0 diff
(100 %id)
DC415313 trachea .f-u 161 to 658 1 to 498   tiling clone,   498/498
(100 %)
2 diff
(99.6 %id)
BG548407 lung .f-u 173 to 761 1 to 591 C63L S65* tiling clone,   591/592
(99 %)
5 diff
(99.2 %id)
CV813238 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .g 1 to 693 1 to 693 exact tiling clone,   693/693
(100 %)
1 diff
(99.9 %id)
FN054628 breast carcinoma .g 511 to 591 1 to 81       81/81
(100 %)
0 diff
(100 %id)
AY364088 cerebellum .h 1 to 845 1 to 845   tiling clone,   845/845
(100 %)
0 diff
(100 %id)
H52005 liver and spleen .h 794 to 1174 1 to 384   tiling clone,   384/395
(97 %)
7 diff
(98.3 %id)
BX495433 Liver .h 1172 to 1666 1 to 495   tiling clone,   495/495
(100 %)
2 diff
(99.6 %id)
DB149725 thymus .h 1609 to 2174 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA319049 hippocampus .h 1702 to 2274 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
DB308986 hippocampus .h 3058 to 3500 441 to 1   tiling clone,   441/451
(97 %)
5 diff
(98.9 %id)
DB088919 testis .i 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DB213432 trachea .i 2 to 474 2 to 474   capped   473/473
(100 %)
1 diff
(99.8 %id)
DB081510 testis .i 65 to 549 2 to 486   tiling clone, capped   485/485
(100 %)
0 diff
(100 %id)
BG569740 lung .i 1786 to 2506 1 to 726   tiling clone,   726/787
(92 %)
31 diff
(96.1 %id)
DB518629 testis .i 2235 to 2605 3 to 373   tiling clone, Submitted on the opposite strand 371/375
(98 %)
4 diff
(99.0 %id)
DB230988 trachea .j 1 to 593 2 to 594   tiling clone, capped   593/593
(100 %)
1 diff
(99.9 %id)
BF796099 lymph, lymphoma, cell line .j 535 to 1300 1 to 767   tiling clone,   767/1129
(67 %)
24 diff
(97.9 %id)
BI022654 marrow .j 895 to 1326 1 to 430   tiling clone,   430/430
(100 %)
8 diff
(98.2 %id)
BF591124 colon, colon tumor, RER+ .j 1035 to 1371 337 to 1       337/337
(100 %)
10 diff
(97.1 %id)
AI869121 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .j 1236 to 1457 221 to 1   tiling clone,   221/221
(100 %)
1 diff
(99.6 %id)
BF369738 placenta_normal .j 1351 to 1844 502 to 11   tiling clone,   492/514
(95 %)
0 diff
(100 %id)
BX101052 placenta .j 1766 to 2422 1 to 656   tiling clone,   656/656
(100 %)
2 diff
(99.7 %id)
R23298 placenta .j 1766 to 2083 1 to 323       323/479
(67 %)
9 diff
(98.2 %id)
R81026 placenta .j 1766 to 2167 1 to 405   fully sequenced,   405/405
(100 %)
4 diff
(99.1 %id)
BQ026221 placenta .j 2063 to 2422 378 to 18   AAA   361/362
(99 %)
4 diff
(98.9 %id)
AI521723 Kidney .j 2090 to 2422 333 to 1   tiling clone,   333/333
(100 %)
0 diff
(100 %id)
R23222 placenta .j 2113 to 2422 319 to 8       312/328
(95 %)
0 diff
(100 %id)
R80820 placenta .j 2137 to 2412 289 to 1   fully sequenced,   289/289
(100 %)
8 diff
(97.3 %id)
AW902826 nervous_normal .j 2178 to 2345 1 to 169       169/169
(100 %)
10 diff
(94.1 %id)
T27270   .k-u 1 to 231 1 to 231 exact     231/231
(100 %)
4 diff
(98.3 %id)
T27296   .k-u 3 to 352 14 to 366 F3X N9X Y15X D18X I20X ... tiling clone,   353/366
(96 %)
7 diff
(98.1 %id)
D82711   .k-u 8 to 302 1 to 296 I20X L23X     296/296
(100 %)
10 diff
(96.7 %id)
D82720   .k-u 8 to 395 1 to 389 exact tiling clone,   389/389
(100 %)
6 diff
(98.5 %id)
D82727   .k-u 8 to 264 1 to 258 Y15X I20X N28X     258/258
(100 %)
3 diff
(98.9 %id)
T27331   .k-u 8 to 249 1 to 242 I20X R21X     242/242
(100 %)
2 diff
(99.2 %id)
T27332   .k-u 8 to 249 1 to 242 I20X R21X     242/242
(100 %)
2 diff
(99.2 %id)
D82725   .k-u 13 to 386 1 to 380 N28E     380/402
(94 %)
18 diff
(95.6 %id)
D82803   .k-u 88 to 237 1 to 149 exact     149/159
(93 %)
9 diff
(94.4 %id)
DA157728 amygdala .k-u 336 to 914 2 to 580   tiling clone, capped   579/580
(99 %)
1 diff
(99.9 %id)
FN047335 breast carcinoma .k-u 387 to 483 1 to 96       96/97
(98 %)
2 diff
(98.0 %id)
T55669 fetal spleen, Spleen .k-u 856 to 955 1 to 100   tiling clone,   100/100
(100 %)
2 diff
(98.0 %id)
T55587 fetal spleen, Spleen .k-u 1634 to 1918 292 to 1   tiling clone,   292/352
(82 %)
9 diff
(97.5 %id)
BQ711161 Spleen .l 1 to 862 24 to 888   tiling clone,   865/889
(97 %)
11 diff
(98.8 %id)
DB076281 testis .l 250 to 782 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
BQ716131 sympathetic trunk .l 525 to 1312 8 to 804 exact tiling clone,   797/917
(86 %)
22 diff
(97.7 %id)
DA234446 brain .l 1246 to 1821 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
AK311737 uterus .m 1 to 1002 1 to 1002 exact tiling clone,   1002/1002
(100 %)
0 diff
(100 %id)
DC423654 uterus .m 1 to 560 1 to 560 exact     560/560
(100 %)
0 diff
(100 %id)
DC415603 trachea .m 9 to 545 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
DA295851 hippocampus .n 1 to 473 2 to 476 S38V S39* tiling clone, capped   475/475
(100 %)
5 diff
(99.0 %id)
DA518130 brain .n 38 to 333 2 to 296   capped   295/297
(99 %)
2 diff
(99.4 %id)
DA804178 brain .n 38 to 565 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
AW408663 lymph .n 53 to 349 1 to 297       297/297
(100 %)
8 diff
(97.4 %id)
BM149084 leukopheresis .n 70 to 628 1 to 560       560/560
(100 %)
5 diff
(99.2 %id)
CR746515 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .n 93 to 585 1 to 494   tiling clone,   494/494
(100 %)
6 diff
(98.8 %id)
CN411974 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n 152 to 560 1 to 409       409/409
(100 %)
0 diff
(100 %id)
DA113748 cerebellum .n 308 to 857 2 to 551   tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DA328961 hippocampus .o 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
BQ224836 large cell carcinoma, lung .o 64 to 667 1 to 604 exact tiling clone,   604/1119
(53 %)
0 diff
(100 %id)
DW438458 Liver .p 1 to 224 18 to 241   tiling clone,   224/245
(91 %)
10 diff
(96.0 %id)
AA805618 germinal center B cell .p 207 to 620 445 to 32 R63E tiling clone, AAA   414/414
(100 %)
2 diff
(99.6 %id)
DB096205 testis .q 1 to 560 4 to 564 R9X S10V R11P Q12P L13A ... tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA194814 amygdala .q 1 to 542 2 to 544 *16V tiling clone, capped   543/543
(100 %)
2 diff
(99.7 %id)
CD109448 Human Placenta, placenta .r 1 to 500 27 to 526 exact tiling clone,   500/852
(58 %)
8 diff
(99.1 %id)
BF107625 placenta .r 39 to 498 1 to 458   tiling clone,   458/653
(70 %)
4 diff
(99.4 %id)
BX646884 Liver .s 1 to 461 1 to 461 exact tiling clone,   461/461
(100 %)
2 diff
(99.6 %id)
BU658426 blood .t-u 1 to 426 7 to 432 exact tiling clone,   426/432
(98 %)
0 diff
(100 %id)
AV731670 hypothalamus Gene SGMS1, variant not shown         Suspected internal deletion, this clone was ignored    
DA258287 caudate nucleus Gene SGMS1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB366821   Gene SGMS1, variant not shown              
DA734690   Gene SGMS1, variant not shown       capped      
DA095849 cerebellum Gene SGMS1, variant not shown       capped This clone was ignored    
BM552413 leiomyosarcoma, uterus Gene SGMS1, variant not shown         This clone was ignored    
DA957124 Spleen Gene SGMS1, variant not shown       capped      
DB334040 Spleen Gene SGMS1, variant not shown              
DB163207 thymus Gene SGMS1, variant not shown       capped Suspected internal deletion, suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k-u, .l, .m, .n, .o, .p, .q, .r, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI