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Gene DCUN1D3andERI2andTHUMPD1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
606 representative clones for gene DCUN1D3andERI2andTHUMPD1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX648185 human fetal brain .a 1 to 3653 1 to 3653 Y380C tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 3653/3653
(100 %)
2 diff
(100.0 %id)
DN991578 brain, whole brain .a 408 to 1074 8 to 675       668/675
(98 %)
8 diff
(98.9 %id)
AA554371 germ cell tumor .a 591 to 1080 488 to 1       488/488
(100 %)
2 diff
(99.6 %id)
DN999538   .a 649 to 1265 13 to 629   tiling clone,   621/629
(98 %)
11 diff
(98.3 %id)
EC499393 Prostate .a 793 to 871 80 to 1       80/92
(86 %)
1 diff
(99.0 %id)
EC466199 Prostate .a 795 to 897 102 to 1       102/102
(100 %)
1 diff
(99.1 %id)
EC524777 Prostate .a 795 to 897 102 to 1       102/102
(100 %)
1 diff
(99.1 %id)
EC539939 Prostate .a 795 to 897 103 to 1       103/103
(100 %)
0 diff
(100 %id)
EC490278 Prostate .a 803 to 909 107 to 1       107/107
(100 %)
2 diff
(98.2 %id)
EC505968 Prostate .a 803 to 909 107 to 2       106/107
(99 %)
0 diff
(100 %id)
EC524692 Prostate .a 803 to 909 110 to 4       107/110
(97 %)
0 diff
(100 %id)
EC535415 Prostate .a 803 to 901 113 to 15       99/113
(87 %)
0 diff
(100 %id)
EC563474 Prostate .a 803 to 909 108 to 1       108/108
(100 %)
3 diff
(97.3 %id)
EC564815 Prostate .a 803 to 909 106 to 1       106/106
(100 %)
3 diff
(97.2 %id)
EC524860 Prostate .a 934 to 1032 101 to 1       101/101
(100 %)
2 diff
(98.1 %id)
EC456775 Prostate .a 957 to 1060 108 to 5       104/108
(96 %)
0 diff
(100 %id)
EC462536 Prostate .a 1125 to 1239 117 to 4       114/117
(97 %)
0 diff
(100 %id)
DB320750 Kidney .a 1269 to 1831 564 to 1       564/564
(100 %)
3 diff
(99.5 %id)
BE243733 leukopheresis .a 1475 to 1831 357 to 1       357/357
(100 %)
4 diff
(98.9 %id)
EC494407 Prostate .a 1821 to 1928 107 to 1       107/108
(99 %)
1 diff
(99.1 %id)
FN165817 breast carcinoma .a 1933 to 2040 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
AA281408 germinal center B cell .a 1957 to 2369 1 to 413       413/413
(100 %)
0 diff
(100 %id)
BX280488 germinal center B cell .a 1958 to 2453 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BF211440 bone marrow, from chronic myelogenous leukemia .a 2062 to 2804 1 to 740       740/841
(87 %)
32 diff
(96.2 %id)
BE467706 carcinoid, lung .a 2087 to 2556 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AI915981 colon, colon tumor, RER+ .a 2124 to 2335 224 to 13   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 212/212
(100 %)
0 diff
(100 %id)
EH347756   .a 2147 to 2239 1 to 93       93/93
(100 %)
0 diff
(100 %id)
BU177799 melanotic melanoma, skin .a 2396 to 3152 24 to 793       770/822
(93 %)
19 diff
(97.7 %id)
BI258557 cervical carcinoma cell line, cervix .a 2429 to 3164 12 to 744       733/744
(98 %)
10 diff
(98.7 %id)
BG545134 lung .a 2466 to 3082 1 to 618       618/618
(100 %)
8 diff
(98.8 %id)
N75262 multiple sclerosis lesions .a 2516 to 2747 1 to 232       232/232
(100 %)
0 diff
(100 %id)
DA734779   .a 2521 to 3173 2 to 654   fully sequenced, capped   653/653
(100 %)
3 diff
(99.6 %id)
BU193563 testis .a 2576 to 3355 1 to 783       783/786
(99 %)
7 diff
(99.2 %id)
BG285614 bladder, transitional cell papilloma, cell line .a 2577 to 3266 1 to 687       687/687
(100 %)
19 diff
(97.3 %id)
BE960982 melanotic melanoma, high MDR, skin .a 2608 to 3175 1 to 555       555/729
(76 %)
17 diff
(97.7 %id)
W38994 parathyroid gland, parathyroid tumor .a 2796 to 3204 1 to 409       409/409
(100 %)
1 diff
(99.8 %id)
CB164077 Liver .a 2800 to 3265 16 to 481       466/481
(96 %)
6 diff
(98.8 %id)
BF030849 hypernephroma, Kidney .a 2803 to 3433 1 to 634       634/737
(86 %)
17 diff
(97.7 %id)
FN173065 breast carcinoma .a 2817 to 2894 1 to 79       79/79
(100 %)
4 diff
(95.0 %id)
TI_149311890   .a 2833 to 3657 898 to 82       817/1034
(79 %)
0 diff
(100 %id)
AI252558 ovary, papillary serous carcinoma .a 2840 to 3075 251 to 16       236/289
(81 %)
0 diff
(100 %id)
AI251414 ovary, papillary serous carcinoma .a 2840 to 3075 251 to 16       236/271
(87 %)
0 diff
(100 %id)
BE138383 ovary, papillary serous carcinoma .a 2841 to 3075 250 to 16       235/277
(84 %)
0 diff
(100 %id)
AA410753 ovarian tumor, ovary .a 2900 to 3117 1 to 217       217/217
(100 %)
1 diff
(99.6 %id)
N79951 multiple sclerosis lesions .a 2907 to 3075 1 to 170       170/175
(97 %)
3 diff
(98.3 %id)
BF801446 colon_ins .a 2932 to 3093 7 to 165       159/165
(96 %)
6 diff
(96.4 %id)
FN159089 breast carcinoma .a 2952 to 3034 1 to 82       82/82
(100 %)
4 diff
(95.2 %id)
BF435642 sciatic nerve .a 2969 to 3470 502 to 1       502/502
(100 %)
0 diff
(100 %id)
BM977638 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2972 to 3657 697 to 12       686/697
(98 %)
0 diff
(100 %id)
BI333981 cervical carcinoma cell line, cervix .a 2993 to 3655 1 to 667       667/687
(97 %)
9 diff
(98.7 %id)
AA935219 pooled germ cell tumors .a 3010 to 3469 460 to 1       460/460
(100 %)
2 diff
(99.6 %id)
AA977041 pooled germ cell tumors .a 3028 to 3469 443 to 1       443/443
(100 %)
4 diff
(99.1 %id)
N79359 multiple sclerosis lesions .a 3033 to 3114 1 to 82       82/88
(93 %)
2 diff
(97.8 %id)
BF154855 breast .a 3037 to 3515 16 to 494       479/497
(96 %)
9 diff
(98.2 %id)
AI458671 carcinoid, lung .a 3107 to 3651 547 to 3       545/547
(99 %)
0 diff
(100 %id)
DB366930   .a 3143 to 3650 504 to 1   fully sequenced,   504/504
(100 %)
2 diff
(99.7 %id)
AW304062 pooled .a 3160 to 3654 495 to 1       495/495
(100 %)
1 diff
(99.8 %id)
AA973485 carcinoid, lung .a 3166 to 3652 479 to 1       479/479
(100 %)
10 diff
(98.0 %id)
AI419795 pooled .a 3172 to 3653 482 to 1       482/482
(100 %)
0 diff
(100 %id)
N64622 multiple sclerosis lesions .a 3179 to 3654 487 to 1       487/613
(79 %)
12 diff
(98.1 %id)
AI376421   .a 3185 to 3657 480 to 8       473/480
(98 %)
0 diff
(100 %id)
H89075 cochlea, ear .a 3203 to 3444 1 to 250   fully sequenced,   250/250
(100 %)
5 diff
(98.0 %id)
N58848 multiple sclerosis lesions .a 3216 to 3650 435 to 1       435/435
(100 %)
0 diff
(100 %id)
N46993 multiple sclerosis lesions .a 3228 to 3654 434 to 1       434/439
(98 %)
11 diff
(97.5 %id)
AA764898 germinal center B cell .a 3237 to 3653 428 to 12   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 417/417
(100 %)
0 diff
(100 %id)
AI624936 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3240 to 3650 411 to 1       411/411
(100 %)
0 diff
(100 %id)
AI217160   .a 3243 to 3651 411 to 3       409/411
(99 %)
0 diff
(100 %id)
AA809132 germinal center B-cells, tonsil .a 3254 to 3653 422 to 23   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 400/400
(100 %)
0 diff
(100 %id)
AW339571 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 3258 to 3657 402 to 3       400/402
(99 %)
0 diff
(100 %id)
CN429254 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3276 to 3653 1 to 378       378/378
(100 %)
5 diff
(98.7 %id)
AA814076 germinal center B cell .a 3285 to 3657 380 to 6       375/380
(98 %)
0 diff
(100 %id)
AI933796 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3341 to 3651 310 to 2       309/314
(98 %)
0 diff
(100 %id)
AI831876 Kidney .a 3342 to 3642 312 to 12       301/312
(96 %)
0 diff
(100 %id)
N62393 multiple sclerosis lesions .a 3360 to 3654 295 to 1       295/295
(100 %)
3 diff
(99.0 %id)
AA827839 germinal center B cell .a 3362 to 3657 301 to 6       296/301
(98 %)
0 diff
(100 %id)
H88986 cochlea, ear .a 3414 to 3635 228 to 1   fully sequenced,   228/228
(100 %)
0 diff
(100 %id)
AA902872 Kidney .a 3505 to 3625 121 to 1       121/121
(100 %)
2 diff
(98.4 %id)
AA977257 carcinoid, lung .a 3505 to 3625 121 to 1       121/121
(100 %)
0 diff
(100 %id)
AI282687 colon, moderately-differentiated adenocarcinoma .a 3505 to 3625 121 to 1       121/121
(100 %)
0 diff
(100 %id)
AW673205 cervical carcinoma cell line, cervix .a 3513 to 3625 113 to 1       113/121
(93 %)
1 diff
(99.2 %id)
BF431021 Kidney .a 3513 to 3622 113 to 4       110/121
(90 %)
0 diff
(100 %id)
FN101991 breast carcinoma .a 3522 to 3637 1 to 116       116/117
(99 %)
6 diff
(94.9 %id)
NM_001142725.1   .b 1 to 3499 1 to 3499 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 3499/3499
(100 %)
0 diff
(100 %id)
AK292594 testis .c 1 to 2682 1 to 2682   tiling clone,   2682/2682
(100 %)
5 diff
(99.9 %id)
DB097145 testis .c 2 to 591 2 to 591   capped   590/590
(100 %)
4 diff
(99.4 %id)
BG718567 testis .c 7 to 680 1 to 684       684/780
(87 %)
27 diff
(96.6 %id)
DB057131 testis .c 13 to 538 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
BG390076 embryonal carcinoma, cell line, testis .c 83 to 723 1 to 643       643/870
(73 %)
18 diff
(98.0 %id)
DA482079   .c 200 to 792 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
CD109977 Human Placenta, placenta .d 1 to 667 29 to 704   tiling clone,   681/842
(80 %)
28 diff
(96.7 %id)
AL691640   .d 650 to 988 1 to 339   tiling clone,   339/339
(100 %)
1 diff
(99.8 %id)
AL691641   .d 1799 to 2414 652 to 37   tiling clone, AAA   616/616
(100 %)
4 diff
(99.4 %id)
BQ711008 Spleen .e 1 to 716 1 to 722   tiling clone,   722/926
(77 %)
15 diff
(98.4 %id)
BX640898 endometrium .e 295 to 4411 1 to 4117 D66G tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 4117/4117
(100 %)
7 diff
(99.9 %id)
DA421094 cervix .e 416 to 964 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA443333 tongue, tumor tissue .e 474 to 1014 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA630827 Kidney .e 474 to 1057 2 to 585   capped   584/584
(100 %)
3 diff
(99.5 %id)
BP282533 bone marrow .e 489 to 1068 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
CN427202 embryonic stem cells, DMSO-treated H9 cellline .e 502 to 1222 9 to 729       721/729
(98 %)
6 diff
(99.2 %id)
BP283112 bone marrow .e 507 to 1089 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB246963   .e 522 to 964 2 to 444   capped   443/443
(100 %)
2 diff
(99.6 %id)
DB056560 testis .e 543 to 808 2 to 267   capped   266/266
(100 %)
1 diff
(99.7 %id)
BP229412 brain .e 549 to 1130 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP240209 Liver .e 549 to 1118 1 to 570       570/570
(100 %)
3 diff
(99.5 %id)
DA086081 cerebellum .e 550 to 1131 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA490969 brain .e 550 to 1073 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA516190 brain .e 550 to 1073 2 to 525   capped   524/524
(100 %)
3 diff
(99.5 %id)
DA552235   .e 550 to 1098 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA818695   .e 550 to 1030 2 to 483   capped   482/482
(100 %)
2 diff
(99.6 %id)
DA633253 Kidney .e 552 to 1137 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA816066   .e 552 to 1121 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BP335335 coronary artery .e 555 to 1135 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP337364 coronary artery .e 555 to 1141 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DB273969 uterus .e 556 to 982 2 to 428   capped   427/434
(98 %)
2 diff
(99.6 %id)
DA552201   .e 557 to 956 2 to 401   capped   400/400
(100 %)
1 diff
(99.8 %id)
DA259725 caudate nucleus .e 558 to 996 2 to 440   capped   439/439
(100 %)
4 diff
(99.1 %id)
DA546886   .e 559 to 1018 2 to 461   capped   460/460
(100 %)
1 diff
(99.8 %id)
DA679498   .e 559 to 1113 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DB016197 esophageal, tumor tissue .e 560 to 1118 2 to 561   capped   560/562
(99 %)
3 diff
(99.5 %id)
BP199319 brain .e 561 to 1142 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP236060 coronary artery .e 561 to 1143 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP270507 small intestine .e 561 to 1143 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP279958   .e 561 to 1142 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP314916 mammary gland .e 561 to 1143 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
DA925103 small intestine .e 561 to 1094 2 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
BP335733 coronary artery .e 561 to 1153 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP336130 coronary artery .e 561 to 1153 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP336265 coronary artery .e 561 to 1142 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DA167582 amygdala .e 562 to 1060 22 to 522   capped   501/501
(100 %)
3 diff
(99.5 %id)
DA304533 hippocampus .e 562 to 1137 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA306844 hippocampus .e 562 to 1132 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
BX484616   .e 562 to 1189 1 to 627       627/627
(100 %)
6 diff
(99.1 %id)
DA490874 brain .e 562 to 1137 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA495823 brain .e 562 to 1135 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DA499284 brain .e 562 to 1137 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA501966 brain .e 562 to 1073 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
DA505571 brain .e 562 to 1127 2 to 571   capped   570/570
(100 %)
5 diff
(99.2 %id)
DA584988 lung .e 562 to 1073 2 to 512   capped   511/511
(100 %)
2 diff
(99.7 %id)
DA603255   .e 562 to 1030 2 to 470   capped   469/469
(100 %)
3 diff
(99.4 %id)
DA610278   .e 562 to 1124 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
DA644286   .e 562 to 1138 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA692702   .e 562 to 1125 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA744234   .e 562 to 830 2 to 270   capped   269/269
(100 %)
1 diff
(99.7 %id)
DA792678 brain .e 562 to 1180 2 to 619   capped   618/618
(100 %)
2 diff
(99.7 %id)
DA796295 brain .e 562 to 1008 2 to 448   capped   447/447
(100 %)
1 diff
(99.8 %id)
DA832377 placenta .e 562 to 1255 2 to 696   capped   695/695
(100 %)
2 diff
(99.8 %id)
DA925330 small intestine .e 562 to 1135 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DA933371 Spleen .e 562 to 1107 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA944310 Spleen .e 562 to 1115 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
DA945493 Spleen .e 562 to 1118 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA947216 Spleen .e 562 to 1118 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA978776 synovial membrane tissue from rheumatioidarthritis .e 562 to 1083 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DB233181 trachea .e 562 to 1125 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB274149 uterus .e 562 to 938 2 to 378   capped   377/377
(100 %)
2 diff
(99.5 %id)
DA483226 brain .e 563 to 1310 2 to 749   capped   748/748
(100 %)
9 diff
(98.8 %id)
DB450626 testis .e 563 to 997 1 to 436       436/437
(99 %)
5 diff
(98.9 %id)
DB458163 testis .e 563 to 1071 1 to 509       509/509
(100 %)
2 diff
(99.7 %id)
DA623380 Kidney .e 563 to 1108 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DB447781 testis .e 564 to 1006 1 to 443       443/443
(100 %)
5 diff
(98.9 %id)
DB467328 hippocampus .e 564 to 1016 1 to 454       454/455
(99 %)
10 diff
(97.9 %id)
DB474972 hippocampus .e 564 to 1067 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
TI_45216624   .e 564 to 1236 125 to 798       674/798
(84 %)
14 diff
(98.3 %id)
BP279791   .e 564 to 1145 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP332493 renal proximal tubule .e 564 to 1145 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA076117 cerebellum .e 565 to 1117 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA124990 cerebellum .e 565 to 808 2 to 245   capped   244/244
(100 %)
1 diff
(99.6 %id)
DA159806 amygdala .e 565 to 1073 2 to 511   capped   510/510
(100 %)
2 diff
(99.7 %id)
DA208040 brain .e 565 to 1133 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA276485 corpus callosum .e 565 to 1131 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA318806 hippocampus .e 565 to 1118 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA397277 thalamus .e 565 to 1150 2 to 588   capped   587/587
(100 %)
3 diff
(99.5 %id)
DA448782 tongue, tumor tissue .e 565 to 1122 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA490181 brain .e 565 to 1073 2 to 511   capped   510/510
(100 %)
2 diff
(99.7 %id)
DA491951 brain .e 565 to 1145 2 to 583   capped   582/582
(100 %)
4 diff
(99.4 %id)
DA547547   .e 565 to 1118 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
DA613425   .e 565 to 1142 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA694489   .e 565 to 1045 2 to 484   capped   483/490
(98 %)
4 diff
(99.2 %id)
DA700033   .e 565 to 1025 2 to 462   capped   461/461
(100 %)
1 diff
(99.8 %id)
DA703682   .e 565 to 1073 2 to 509   capped   508/508
(100 %)
3 diff
(99.5 %id)
DA740736   .e 565 to 808 2 to 245   capped   244/244
(100 %)
1 diff
(99.6 %id)
DA787806 brain .e 565 to 945 2 to 382   capped   381/381
(100 %)
1 diff
(99.8 %id)
DA847999 placenta .e 565 to 1021 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
DA904631   .e 565 to 982 2 to 419   capped   418/418
(100 %)
2 diff
(99.6 %id)
DB072345 testis .e 565 to 982 2 to 422   capped   421/421
(100 %)
4 diff
(99.1 %id)
DB111426 thymus .e 565 to 1136 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB117430 thymus .e 565 to 1060 2 to 498   capped   497/497
(100 %)
3 diff
(99.4 %id)
DB121891 thymus .e 565 to 1025 2 to 463   capped   462/462
(100 %)
2 diff
(99.6 %id)
DB219569 trachea .e 565 to 1112 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA490280 brain .e 569 to 1121 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DB105283 thymus .e 569 to 1052 2 to 486   capped   485/485
(100 %)
3 diff
(99.4 %id)
AL708990 human skeletal muscle .e 577 to 1183 1 to 607       607/607
(100 %)
4 diff
(99.4 %id)
DB447394 testis .e 577 to 1014 1 to 438       438/438
(100 %)
1 diff
(99.8 %id)
DA506682 brain .e 578 to 1152 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA912276   .e 578 to 1137 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA790754 brain .e 579 to 1130 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB259640 uterus .e 579 to 1096 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA051139   .e 581 to 1148 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
DA350551 substantia nigra .e 581 to 1162 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA412916 thalamus .e 581 to 1030 2 to 452   capped   451/451
(100 %)
1 diff
(99.8 %id)
CN427201 embryonic stem cells, DMSO-treated H9 cellline .e 581 to 1263 9 to 691       683/691
(98 %)
7 diff
(99.0 %id)
DA513208 brain .e 581 to 1134 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA605175   .e 581 to 1084 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DB255676 uterus .e 581 to 1153 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DN991766 brain, whole brain .e 582 to 1316 3 to 735       733/735
(99 %)
8 diff
(99.0 %id)
BP281155 bone marrow .e 584 to 1164 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CV572301 cornea, eye .e 584 to 1225 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
BQ893363 dorsal root ganglia .e 587 to 1483 1 to 912       912/912
(100 %)
16 diff
(98.3 %id)
AA115418 colon, tumor .e 591 to 993 1 to 400       400/400
(100 %)
7 diff
(98.3 %id)
BF219939 lung, small cell carcinoma .e 602 to 1234 1 to 633       633/633
(100 %)
7 diff
(98.9 %id)
DA439220 tongue, tumor tissue .e 615 to 1164 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA886710   .e 615 to 1151 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB085525 testis .e 627 to 1190 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CV026121 mixed .e 640 to 1254 1 to 615       615/615
(100 %)
0 diff
(100 %id)
DB222810 trachea .e 850 to 1413 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA968005 stomach .e 874 to 1447 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
AL134903 melanoma (MeWo cell line) .e 951 to 1574 1 to 624     Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 624/624
(100 %)
0 diff
(100 %id)
BP372172 umbilical cord .e 951 to 1529 1 to 579       579/581
(99 %)
2 diff
(99.7 %id)
BG254601 adenocarcinoma, cell line, Prostate .e 1014 to 1716 1 to 705       705/976
(72 %)
13 diff
(98.7 %id)
AA326624 brain, cerebellum .e 1032 to 1368 1 to 337       337/337
(100 %)
0 diff
(100 %id)
DA151084 amygdala .e 1099 to 1684 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
BP279633   .e 1163 to 1751 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
CN427194 embryonic stem cells, DMSO-treated H9 cellline .e 1179 to 1709 1 to 531       531/531
(100 %)
0 diff
(100 %id)
BF674525 Prostate .e 1223 to 1872 1 to 645       645/865
(74 %)
15 diff
(98.3 %id)
W49831 senescent fibroblast .e 1327 to 1821 1 to 497       497/497
(100 %)
4 diff
(99.2 %id)
BP375478 uterus .e 1685 to 2268 1 to 581   tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
TI_149276638   .e 1707 to 2550 918 to 70       849/922
(92 %)
0 diff
(100 %id)
BU677316 lung, Primary Lung Epithelial Cells .e 1791 to 2536 764 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 746/746
(100 %)
2 diff
(99.8 %id)
BX116504 multiple sclerosis lesions .e 1878 to 2549 673 to 2     Submitted on the opposite strand 672/674
(99 %)
0 diff
(100 %id)
DB378530 placenta .e 1923 to 2536 609 to 1       609/614
(99 %)
13 diff
(97.9 %id)
CA450325 Human Lung Epithelial cells, lung .e 1924 to 2688 783 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 765/765
(100 %)
1 diff
(99.9 %id)
DA479113   .e 1969 to 2536 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB265843 uterus .e 1976 to 2555 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA734869   .e 1977 to 2755 2 to 784   capped   783/784
(99 %)
15 diff
(98.1 %id)
BP377292 uterus .e 1984 to 2565 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AU185579 skin .e 1987 to 2535 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
BF437980 carcinoid, lung .e 2001 to 2539 539 to 1       539/539
(100 %)
1 diff
(99.9 %id)
CN427198 embryonic stem cells, DMSO-treated H9 cellline .e 2025 to 2495 1 to 471       471/471
(100 %)
0 diff
(100 %id)
H67227 nose, olfactory epithelium .e 2033 to 2371 1 to 343   fully sequenced,   343/343
(100 %)
9 diff
(97.4 %id)
DA485254 brain .e 2058 to 2614 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
AI742663 pooled .e 2087 to 2535 449 to 1       449/449
(100 %)
3 diff
(99.4 %id)
BE348898 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .e 2092 to 2536 445 to 1       445/445
(100 %)
2 diff
(99.6 %id)
DA255552 caudate nucleus .e 2100 to 2574 2 to 478   capped   477/477
(100 %)
4 diff
(99.2 %id)
CX784561 human embryonic stem cells .e 2101 to 2880 1 to 780       780/780
(100 %)
3 diff
(99.7 %id)
AA115419 colon, tumor .e 2108 to 2508 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AA837145 germinal center B cell .e 2116 to 2546 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AW043595 pooled .e 2116 to 2692 577 to 1       577/577
(100 %)
1 diff
(99.9 %id)
AA602982 normal prostate, Prostate .e 2131 to 2688 559 to 1       559/559
(100 %)
3 diff
(99.5 %id)
DA487334 brain .e 2133 to 2714 2 to 583   capped   582/582
(100 %)
5 diff
(99.2 %id)
R76363 placenta .e 2134 to 2414 1 to 283   fully sequenced,   283/283
(100 %)
1 diff
(99.7 %id)
BE502760 carcinoid, lung .e 2146 to 2535 390 to 1       390/390
(100 %)
0 diff
(100 %id)
AI674206 Prostate .e 2147 to 2688 542 to 1       542/542
(100 %)
0 diff
(100 %id)
DA627934 Kidney .e 2207 to 2735 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
AI224540 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2215 to 2688 473 to 1       473/473
(100 %)
1 diff
(99.8 %id)
AI192416 uterus .e 2217 to 2491 275 to 1       275/275
(100 %)
0 diff
(100 %id)
BP213667 cerebrum .e 2218 to 2798 1 to 578       578/578
(100 %)
3 diff
(99.5 %id)
BM692301 eye, human retina .e 2226 to 2536 1 to 311   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 311/311
(100 %)
0 diff
(100 %id)
BE350065 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .e 2228 to 2688 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AA251488 germinal center B cell .e 2233 to 2532 300 to 1     Submitted on the opposite strand 300/300
(100 %)
0 diff
(100 %id)
AA662495 normal prostate, Prostate .e 2241 to 2688 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AA301274 testis .e 2244 to 2541 297 to 1     Submitted on the opposite strand 297/297
(100 %)
2 diff
(99.4 %id)
AI300307 placenta .e 2275 to 2691 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
AA722928 heart .e 2295 to 2688 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AA478563 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2300 to 2688 389 to 1       389/389
(100 %)
0 diff
(100 %id)
BP239293 Liver .e 2309 to 2862 1 to 552       552/552
(100 %)
5 diff
(99.1 %id)
AA579347   .e 2313 to 2678 1 to 365       365/365
(100 %)
1 diff
(99.8 %id)
AA629042   .e 2324 to 2682 359 to 1       359/359
(100 %)
3 diff
(99.2 %id)
BX506582 Liver .e 2341 to 3028 1 to 686       686/686
(100 %)
4 diff
(99.5 %id)
H81547 nose, olfactory epithelium .e 2341 to 2506 169 to 1   fully sequenced,   169/169
(100 %)
0 diff
(100 %id)
BG231173 nasopharynx, normal epithelium .e 2341 to 2703 403 to 40       364/403
(90 %)
0 diff
(100 %id)
DA428620 colon .e 2346 to 2910 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DB110044 thymus .e 2346 to 2919 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BM673561 eye, human retina .e 2346 to 2505 160 to 1   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 160/160
(100 %)
0 diff
(100 %id)
DB258272 uterus .e 2346 to 2916 2 to 572   capped   571/572
(99 %)
4 diff
(99.4 %id)
N79902 multiple sclerosis lesions .e 2347 to 2536 195 to 1     Submitted on the opposite strand 195/198
(98 %)
8 diff
(96.0 %id)
AI865166 lymph node, lymphoma, follicular mixed small and largecell .e 2348 to 2536 189 to 1       189/189
(100 %)
0 diff
(100 %id)
AA252018 germinal center B cell .e 2369 to 2536 168 to 1     Submitted on the opposite strand 168/168
(100 %)
0 diff
(100 %id)
R76688 placenta .e 2384 to 2672 294 to 1   fully sequenced,   294/294
(100 %)
0 diff
(100 %id)
AI867958 Prostate .e 2399 to 2637 239 to 1       239/239
(100 %)
0 diff
(100 %id)
DA147936 amygdala .e 2401 to 2975 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DR762732 embryonic stem .e 2443 to 3214 3 to 772   tiling clone,   770/772
(99 %)
8 diff
(99.0 %id)
DA428073 colon .e 2688 to 3243 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DA963439 stomach .e 2694 to 3237 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BY997370   .e 2697 to 3260 31 to 593       563/593
(94 %)
6 diff
(99.0 %id)
Z43536 brain, total brain .e 2724 to 3099 5 to 379       375/379
(98 %)
6 diff
(98.5 %id)
CN370021 embryonic stem cells, cell lines H1, H7, andH9 .e 2752 to 3494 1 to 744       744/744
(100 %)
4 diff
(99.5 %id)
BG771366 adenocarcinoma, Prostate .e 2825 to 3560 1 to 741       741/795
(93 %)
27 diff
(96.7 %id)
BF574264 muscle (skeletal) .e 2886 to 3596 1 to 703       703/879
(79 %)
27 diff
(97.0 %id)
BX498222 Liver .e 2896 to 3454 1 to 560       560/560
(100 %)
3 diff
(99.5 %id)
BM456904 embryonal carcinoma, cell line, testis .e 2982 to 3905 1 to 934       934/1061
(88 %)
27 diff
(97.5 %id)
BG166339 hypernephroma, cell line, Kidney .e 3076 to 3727 1 to 659       659/1207
(54 %)
15 diff
(98.8 %id)
BG291094 bladder, transitional cell papilloma, cell line .e 3082 to 3856 1 to 770       770/968
(79 %)
36 diff
(96.3 %id)
BF789917 muscle (skeletal) .e 3104 to 3705 1 to 595       595/857
(69 %)
9 diff
(99.0 %id)
BP425114 small intestine .e 3129 to 3640 1 to 512   tiling clone, Submitted on the opposite strand 512/512
(100 %)
0 diff
(100 %id)
BG289420 bladder, transitional cell papilloma, cell line .e 3154 to 3943 1 to 784       784/915
(85 %)
22 diff
(97.6 %id)
AA442669   .e 3250 to 3570 1 to 321       321/321
(100 %)
1 diff
(99.7 %id)
BF853020 lung_normal .e 3251 to 3746 1 to 495       495/495
(100 %)
4 diff
(99.2 %id)
AA328604   .e 3260 to 3563 1 to 304       304/304
(100 %)
0 diff
(100 %id)
BM689608 eye, Retina Foveal and Macular .e 3315 to 3750 1 to 436     Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 436/436
(100 %)
5 diff
(98.9 %id)
BE564752 bladder, carcinoma, cell line .e 3319 to 3939 1 to 620       620/667
(92 %)
21 diff
(96.9 %id)
BM831750 stomach .e 3326 to 3821 1 to 494       494/494
(100 %)
3 diff
(99.4 %id)
BE706201 head_neck .e 3346 to 3797 449 to 1       449/449
(100 %)
9 diff
(98.0 %id)
AA477245 ovarian tumor, ovary .e 3357 to 3731 1 to 375     Submitted on the opposite strand 375/375
(100 %)
2 diff
(99.5 %id)
CN370020 embryonic stem cells, DMSO-treated H9 cellline .e 3360 to 3695 1 to 336       336/336
(100 %)
0 diff
(100 %id)
BQ441414 testis .e 3387 to 4105 1 to 728       728/729
(99 %)
17 diff
(97.7 %id)
CN370022 embryonic stem cells, cell lines H1, H7, andH9 .e 3388 to 3979 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
BG000814 placenta_normal .e 3424 to 3836 436 to 24       413/436
(94 %)
0 diff
(100 %id)
BE813980 breast_normal .e 3437 to 3839 418 to 22       397/418
(94 %)
0 diff
(100 %id)
BG572798 placenta .e 3441 to 4199 1 to 762   tiling clone,   762/762
(100 %)
5 diff
(99.4 %id)
BM747030 Ascites, stomach .e 3467 to 4001 1 to 533       533/533
(100 %)
2 diff
(99.7 %id)
TI_154115696   .e 3478 to 4411 1003 to 84   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 920/994
(92 %)
32 diff
(96.8 %id)
TI_149279504   .e 3480 to 4190 785 to 80   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 706/707
(99 %)
15 diff
(97.9 %id)
TI_154116890   .e 3488 to 4411 1022 to 109   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 914/1004
(91 %)
19 diff
(98.2 %id)
BP421207 small intestine .e 3494 to 4038 1 to 545     Submitted on the opposite strand 545/545
(100 %)
1 diff
(99.9 %id)
BM969567 lung, Primary Lung Epithelial Cells .e 3570 to 4190 635 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 617/621
(99 %)
7 diff
(98.9 %id)
TI_159723444   .e 3572 to 4411 933 to 98   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 836/1024
(81 %)
8 diff
(99.3 %id)
BE167753 head_neck .e 3591 to 3804 265 to 49     Submitted on the opposite strand 217/265
(81 %)
0 diff
(100 %id)
CA449376 Chondrosarcoma, Left Pelvis .e 3658 to 4411 768 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 750/750
(100 %)
7 diff
(99.1 %id)
AI090455 heart .e 3674 to 4173 500 to 1       500/500
(100 %)
3 diff
(99.4 %id)
AA428789 ovarian tumor, ovary .e 3695 to 4077 1 to 377   fully sequenced, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 377/377
(100 %)
5 diff
(98.7 %id)
AW182393 pooled .e 3710 to 4189 480 to 1       480/480
(100 %)
3 diff
(99.4 %id)
AI291433 placenta .e 3725 to 4193 463 to 1       463/463
(100 %)
4 diff
(99.2 %id)
CA449642 Chondrosarcoma, Left Pelvis .e 3773 to 4411 657 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 639/639
(100 %)
0 diff
(100 %id)
BM765897 stomach .e 3774 to 4217 1 to 444       444/444
(100 %)
0 diff
(100 %id)
CB242734 Human Lung Epithelial cells, lung .e 3778 to 4411 646 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 628/628
(100 %)
4 diff
(99.4 %id)
AA442799   .e 3798 to 4315 1 to 512       512/512
(100 %)
6 diff
(98.9 %id)
AL134904 melanoma (MeWo cell line) .e 3808 to 4411 622 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 604/604
(100 %)
3 diff
(99.6 %id)
TI_149278835   .e 3823 to 4402 666 to 90   AAA   577/1141
(50 %)
0 diff
(100 %id)
DB367027   .e 3843 to 4411 570 to 1       570/570
(100 %)
8 diff
(98.6 %id)
AW188102 pooled .e 3859 to 4412 554 to 1       554/554
(100 %)
3 diff
(99.5 %id)
BM661581 eye, Retina Foveal and Macular .e 3859 to 4411 571 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 553/553
(100 %)
3 diff
(99.5 %id)
DB334483 stomach .e 3882 to 4411 530 to 1       530/530
(100 %)
3 diff
(99.5 %id)
AI669809 Prostate .e 3907 to 4411 506 to 1       506/506
(100 %)
2 diff
(99.7 %id)
AW956330   .e 3914 to 4411 1 to 498   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 498/498
(100 %)
5 diff
(99.0 %id)
AA376775 small intestine .e 3915 to 4245 1 to 331       331/331
(100 %)
3 diff
(99.1 %id)
AA863416 Kidney .e 3920 to 4192 273 to 1       273/273
(100 %)
3 diff
(99.0 %id)
AW027304 thymus, pooled .e 3936 to 4413 479 to 1       479/479
(100 %)
1 diff
(99.8 %id)
AI873503 pooled .e 3953 to 4414 462 to 1   tiling clone,   462/462
(100 %)
1 diff
(99.8 %id)
DB543799 hippocampus .e 3954 to 4410 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
AI650359 Kidney .e 3963 to 4413 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
DB516083 testis .e 3967 to 4411 1 to 446     Submitted on the opposite strand 446/446
(100 %)
3 diff
(99.4 %id)
BF940721 fibrotheoma, ovary .e 3969 to 4411 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
DB523648 testis .e 3970 to 4411 1 to 442     Submitted on the opposite strand 442/442
(100 %)
2 diff
(99.6 %id)
BF115606 fibrotheoma, ovary .e 3973 to 4190 229 to 12   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 218/218
(100 %)
0 diff
(100 %id)
AI357079 lymph node, lymphoma, follicular mixed small and largecell .e 3977 to 4413 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
AA643383 lymph node, lymphoma .e 3984 to 4411 428 to 1       428/428
(100 %)
4 diff
(99.1 %id)
AI086129 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 3993 to 4411 419 to 1       419/419
(100 %)
2 diff
(99.6 %id)
BM787206 Ascites, stomach .e 3993 to 4411 1 to 419   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 419/419
(100 %)
0 diff
(100 %id)
DB535285 hippocampus .e 3996 to 4411 1 to 419     Submitted on the opposite strand 419/419
(100 %)
6 diff
(98.6 %id)
DB534324 hippocampus .e 4003 to 4410 1 to 408     Submitted on the opposite strand 408/408
(100 %)
3 diff
(99.3 %id)
AA687902 normal prostate, Prostate .e 4004 to 4411 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
AI580000 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 4032 to 4412 381 to 1       381/381
(100 %)
2 diff
(99.5 %id)
AA018141 eye, retina .e 4033 to 4385 354 to 1     Submitted on the opposite strand 354/361
(98 %)
4 diff
(98.9 %id)
AI018366   .e 4036 to 4415 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
AA425920 ovarian tumor, ovary .e 4047 to 4411 376 to 12   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 365/365
(100 %)
1 diff
(99.8 %id)
DB512364 testis .e 4069 to 4410 1 to 343     Submitted on the opposite strand 343/343
(100 %)
6 diff
(98.3 %id)
Z39608 brain, total brain .e 4072 to 4411 340 to 1       340/340
(100 %)
0 diff
(100 %id)
AA469297   .e 4104 to 4414 333 to 23       311/333
(93 %)
0 diff
(100 %id)
AI499163 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 4113 to 4412 300 to 1       300/300
(100 %)
2 diff
(99.4 %id)
BM931967 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 4155 to 4416 292 to 30     Submitted on the opposite strand 263/292
(90 %)
0 diff
(100 %id)
AA552900 low-grade prostatic neoplasia, Prostate .e 4183 to 4411 231 to 1       231/234
(98 %)
9 diff
(96.2 %id)
AA397361   .e 4226 to 4416 211 to 21   tiling clone,   191/211
(90 %)
0 diff
(100 %id)
AA477244 ovarian tumor, ovary .e 4259 to 4409 155 to 1     Submitted on the opposite strand 155/155
(100 %)
5 diff
(96.8 %id)
AW593186 pooled .e 4264 to 4413 150 to 1       150/150
(100 %)
0 diff
(100 %id)
AB040937   .f-u 1 to 3846 1 to 3846 Y87C tiling clone, available from KIAA,   3846/3846
(100 %)
3 diff
(100.0 %id)
BX498813 Liver .f-u 506 to 776 1 to 271       271/271
(100 %)
2 diff
(99.3 %id)
AI148490 uterus .f-u 911 to 1323 413 to 1       413/413
(100 %)
0 diff
(100 %id)
NM_017736.3   .g 1 to 4416 1 to 4416 D26G RefSeq,   4416/4416
(100 %)
1 diff
(100.0 %id)
AK000281   .g 60 to 2533 1 to 2471   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 2471/2471
(100 %)
8 diff
(99.7 %id)
BC000448 Lung, small cell carcinoma .g 82 to 2688 1 to 2607   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2607/2607
(100 %)
0 diff
(100 %id)
BF792276 adrenal cortex carcinoma, cell line, adrenal gland .g 738 to 1508 1 to 767       767/847
(90 %)
16 diff
(98.2 %id)
BP379208 uterus .g 757 to 1312 1 to 557       557/558
(99 %)
3 diff
(99.5 %id)
CN427193 embryonic stem cells, cell lines H1, H7, andH9 .g 834 to 1527 25 to 718       694/718
(96 %)
6 diff
(99.2 %id)
BP378630 uterus .g 916 to 1481 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
CN427199 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 956 to 1603 1 to 648       648/648
(100 %)
4 diff
(99.4 %id)
DA828372 placenta .g 983 to 1514 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
BX498105 Liver .g 1033 to 1512 1 to 484       484/484
(100 %)
4 diff
(99.2 %id)
CN427196 embryonic stem cells, cell lines H1, H7, andH9 .g 1064 to 1693 1 to 629       629/629
(100 %)
8 diff
(98.8 %id)
BP332204 renal proximal tubule .g 1641 to 2221 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AW298791   .g 1649 to 2030 13 to 393   AAA Submitted on the opposite strand 381/393
(96 %)
6 diff
(98.5 %id)
CN427197 embryonic stem cells, DMSO-treated H9 cellline .g 1661 to 2058 1 to 399       399/399
(100 %)
2 diff
(99.5 %id)
DA142508 alzheimer cortex .g 1684 to 2333 9 to 663   capped   655/662
(98 %)
6 diff
(99.1 %id)
CB851309 lung, Primary Lung Epithelial Cells .g 1684 to 2362 43 to 722     Submitted on the opposite strand 680/722
(94 %)
6 diff
(99.2 %id)
AI377356 pooled .g 1687 to 2109 1 to 423   AAA Submitted on the opposite strand 423/423
(100 %)
0 diff
(100 %id)
AI479159 Kidney .g 1697 to 2103 1 to 406     Submitted on the opposite strand 406/406
(100 %)
2 diff
(99.6 %id)
AW611706 Kidney .g 1700 to 2102 1 to 403     Submitted on the opposite strand 403/403
(100 %)
2 diff
(99.6 %id)
N62994 multiple sclerosis lesions .g 1701 to 2143 1 to 445     Submitted on the opposite strand 445/445
(100 %)
2 diff
(99.6 %id)
AA251195 germinal center B cell .g 1701 to 1862 1 to 162     Submitted on the opposite strand 162/162
(100 %)
0 diff
(100 %id)
AI912243 carcinoid, lung .g 1701 to 2272 1 to 572     Submitted on the opposite strand 572/572
(100 %)
0 diff
(100 %id)
AA018206 eye, retina .g 1702 to 2103 1 to 404     Submitted on the opposite strand 404/404
(100 %)
2 diff
(99.6 %id)
AA251787 germinal center B cell .g 1702 to 1859 1 to 158     Submitted on the opposite strand 158/158
(100 %)
0 diff
(100 %id)
AW028771 fibrotheoma, ovary .g 1702 to 2159 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
BE551267 carcinoid, lung .g 1702 to 2244 1 to 543     Submitted on the opposite strand 543/544
(99 %)
2 diff
(99.7 %id)
BF222009 Prostate .g 1702 to 2103 1 to 402     Submitted on the opposite strand 402/402
(100 %)
0 diff
(100 %id)
AA976922 pooled germ cell tumors .g 1703 to 2183 1 to 481     Submitted on the opposite strand 481/481
(100 %)
1 diff
(99.8 %id)
CN427200 embryonic stem cells, cell lines H1, H7, andH9 .g 1800 to 2103 1 to 304       304/304
(100 %)
3 diff
(99.1 %id)
AA478697 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 1869 to 2299 1 to 431       431/431
(100 %)
0 diff
(100 %id)
AA412384   .g 1985 to 2403 1 to 419       419/419
(100 %)
1 diff
(99.8 %id)
DB372876 placenta .g 2224 to 2688 466 to 1       466/467
(99 %)
3 diff
(99.4 %id)
BC010503 Placenta, choriocarcinoma .h 1 to 1478 1 to 1478 Q282K tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1478/1478
(100 %)
2 diff
(99.9 %id)
NM_080663.2   .h 1 to 1478 1 to 1478 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1478/1478
(100 %)
0 diff
(100 %id)
BE244006 leukopheresis .h 1 to 475 1 to 474       474/474
(100 %)
6 diff
(98.8 %id)
BE538637 cervix .h 12 to 733 1 to 724   available from MGC,   724/738
(98 %)
14 diff
(98.2 %id)
BM802714 embryonal carcinoma, cell line, testis .h 15 to 699 1 to 684       684/1160
(58 %)
9 diff
(99.3 %id)
TI_154151619   .h 15 to 687 81 to 750       670/671
(99 %)
14 diff
(98.0 %id)
BG255695 adenocarcinoma, cell line, Prostate .h 16 to 754 1 to 731   tiling clone,   731/746
(97 %)
12 diff
(98.4 %id)
TI_1948121432   .h 41 to 661 131 to 752   fully sequenced,   622/752
(82 %)
17 diff
(97.8 %id)
TI_1948121580   .h 41 to 858 130 to 949       820/1364
(60 %)
17 diff
(98.8 %id)
TI_1948121717   .h 41 to 717 135 to 811   fully sequenced,   677/811
(83 %)
7 diff
(99.2 %id)
CV023428 mixed .h 44 to 645 1 to 602       602/602
(100 %)
1 diff
(99.9 %id)
TI_1948121433   .h 631 to 1039 537 to 129   fully sequenced,   409/537
(76 %)
1 diff
(99.9 %id)
TI_1948121718   .h 656 to 1039 511 to 128   fully sequenced,   384/511
(75 %)
1 diff
(99.9 %id)
TI_57170109   .i 1 to 844 87 to 924   tiling clone,   838/926
(90 %)
17 diff
(98.2 %id)
BI825226 brain, medulla .i 6 to 844 1 to 832   tiling clone,   832/834
(99 %)
10 diff
(98.9 %id)
BX437401 thymus .i 274 to 1115 1 to 842   tiling clone,   842/842
(100 %)
0 diff
(100 %id)
BM723185 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 594 to 1325 1 to 720       720/727
(99 %)
11 diff
(98.5 %id)
H51648 liver and spleen .i 732 to 1047 5 to 327       332/327
(101 %)
57 diff
(82.6 %id)
H95485 liver and spleen .i 732 to 1099 7 to 387       388/457
(84 %)
20 diff
(95.7 %id)
AI424831 pooled .i 818 to 1269 462 to 11   AAA   452/452
(100 %)
0 diff
(100 %id)
AI688141 pooled .i 826 to 1269 454 to 11   AAA   444/444
(100 %)
5 diff
(98.9 %id)
AW341521 pooled .i 826 to 1269 454 to 11   AAA   444/444
(100 %)
0 diff
(100 %id)
AI377709 pooled .i 876 to 1269 404 to 11   AAA   394/394
(100 %)
0 diff
(100 %id)
BG112187 Bone, osteosarcoma, cell line .i 1003 to 1520 1 to 519   AAA   519/519
(100 %)
1 diff
(99.9 %id)
AI188737 placenta .i 1070 to 1521 455 to 4   tiling clone,   452/455
(99 %)
0 diff
(100 %id)
AW236069 Kidney .i 1100 to 1425 343 to 18   AAA   326/326
(100 %)
2 diff
(99.4 %id)
BF431935 pooled .i 1264 to 1520 272 to 15   AAA   258/258
(100 %)
1 diff
(99.7 %id)
FN128273 breast carcinoma .i 1269 to 1337 1 to 70       70/71
(98 %)
5 diff
(93.0 %id)
CF529122 placenta .i 1332 to 1520 206 to 18   AAA   189/189
(100 %)
1 diff
(99.5 %id)
BX437400 thymus .i 1598 to 2469 882 to 8   tiling clone,   875/882
(99 %)
0 diff
(100 %id)
BC040442 Ovary, pooled from 3 adults .j 1 to 2960 1 to 2959 exact tiling clone, available from MGC, AAA   2959/2959
(100 %)
3 diff
(99.9 %id)
BM906288 ovary (pool of 3) .j 2 to 898 1 to 909       909/1028
(88 %)
21 diff
(98.0 %id)
CR746603 ovary (pool of 3) .j 9 to 505 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
BX648998 human retina .j 99 to 2960 1 to 2862 exact available from DKFZ, AAA   2862/2862
(100 %)
3 diff
(99.9 %id)
NM_173475.2   .j 100 to 2960 1 to 2861 exact RefSeq, AAA   2861/2861
(100 %)
0 diff
(100 %id)
CR622365 T cells (Jurkat cell line) Cot10-normalized .j 136 to 2491 1 to 2356 exact tiling clone,   2356/2356
(100 %)
0 diff
(100 %id)
AL559349 T cells from T cell leukemia .j 136 to 1104 1 to 973       973/997
(97 %)
26 diff
(97.4 %id)
AY364247   .j 241 to 1185 1 to 945 exact     945/945
(100 %)
1 diff
(99.9 %id)
BF917771 uterus_tumor .j 493 to 820 328 to 1     Submitted on the opposite strand 328/328
(100 %)
1 diff
(99.7 %id)
CN313385 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j 728 to 1332 1 to 603       603/603
(100 %)
4 diff
(99.4 %id)
BX391891   .j 770 to 1692 927 to 1       927/927
(100 %)
27 diff
(97.1 %id)
BU187551 eye, retinoblastoma .j 790 to 1531 1 to 749       749/912
(82 %)
11 diff
(98.8 %id)
AL047527 uterus .j 948 to 1200 9 to 261       253/261
(96 %)
6 diff
(97.8 %id)
AW450334   .j 1484 to 1992 1 to 509   AAA Submitted on the opposite strand 509/509
(100 %)
0 diff
(100 %id)
CD104462 Pooled-Skin .j 1532 to 2251 1 to 724       724/730
(99 %)
13 diff
(98.3 %id)
FN128352 breast carcinoma .j 1537 to 1625 92 to 1     Submitted on the opposite strand 92/92
(100 %)
3 diff
(96.8 %id)
BG251811 adenocarcinoma, cell line, Liver .j 1540 to 2075 1 to 541       541/898
(60 %)
23 diff
(97.5 %id)
BQ438749 melanotic melanoma, skin .j 1540 to 2366 1 to 839       839/904
(92 %)
6 diff
(99.4 %id)
BM729025 eye, fetal eye .j 1540 to 2183 1 to 644   fully sequenced,   644/644
(100 %)
2 diff
(99.7 %id)
DB233856 trachea .j 1547 to 2156 2 to 613   capped   612/612
(100 %)
5 diff
(99.2 %id)
BU101982   .j 1566 to 2089 527 to 3       525/527
(99 %)
0 diff
(100 %id)
AA234489 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 1605 to 2016 1 to 413       413/413
(100 %)
2 diff
(99.6 %id)
U25792 normal breast, pooled .j 1705 to 1973 1 to 270       270/270
(100 %)
2 diff
(99.3 %id)
BM741904 Ascites, stomach .j 1711 to 2348 1 to 638       638/638
(100 %)
2 diff
(99.7 %id)
BM748003 Ascites, stomach .j 1711 to 2176 1 to 467       467/467
(100 %)
4 diff
(99.2 %id)
BM784818 Ascites, stomach .j 1711 to 2121 1 to 411       411/411
(100 %)
0 diff
(100 %id)
BM770287 Ascites, stomach .j 1711 to 2075 1 to 366       366/368
(99 %)
15 diff
(96.0 %id)
TI_227713301   .j 1942 to 2966 1090 to 82   AAA   1009/1036
(97 %)
40 diff
(96.2 %id)
CV397613.
matches multiple genes
ovary .j 1946 to 2213 287 to 18   tiling clone, Submitted on the opposite strand, also hits gene bloply 270/288
(93 %)
0 diff
(100 %id)
TI_154107285   .j 2065 to 2970 989 to 99   tiling clone, AAA   891/951
(93 %)
57 diff
(94.1 %id)
BM760950.
matches multiple genes
Ascites, stomach .j 2131 to 2498 1 to 367   tiling clone, also hits gene bloply 367/367
(100 %)
1 diff
(99.8 %id)
BM681968 eye, fetal eye .j 2153 to 2523 384 to 15   fully sequenced, AAA   370/370
(100 %)
2 diff
(99.5 %id)
BU608530 Human Lung Epithelial cells, lung .j 2167 to 2523 373 to 17   AAA   357/395
(90 %)
6 diff
(98.5 %id)
AA972654 carcinoid, lung .j 2192 to 2634 1 to 443   AAA Submitted on the opposite strand 443/443
(100 %)
1 diff
(99.8 %id)
BG149914 carcinoid, lung .j 2192 to 2666 1 to 475   AAA Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
W23604.
matches multiple genes
senescent fibroblast .j 2205 to 2386 12 to 192     also hits gene bloply 181/214
(84 %)
4 diff
(98.2 %id)
BM760949 Ascites, stomach .j 2209 to 2414 1 to 206       206/206
(100 %)
4 diff
(98.1 %id)
BM740055.
matches multiple genes
Ascites, stomach .j 2214 to 2554 1 to 337   tiling clone, also hits gene bloply 337/337
(100 %)
4 diff
(98.9 %id)
CN367826 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j 2289 to 2809 1 to 521       521/521
(100 %)
0 diff
(100 %id)
TI_154072775   .j 2327 to 2966 711 to 66   AAA   646/662
(97 %)
45 diff
(93.3 %id)
CA447047 Chondrosarcoma, Left Pubic Bone .j 2330 to 2970 659 to 19   AAA   641/641
(100 %)
0 diff
(100 %id)
BQ005848 Chondrosarcoma, Left Pubic Bone .j 2333 to 2966 645 to 13   AAA   633/633
(100 %)
1 diff
(99.9 %id)
CD367615 Alveolar Macrophage, lung .j 2368 to 2966 611 to 13   AAA   599/599
(100 %)
1 diff
(99.9 %id)
BI093161 cervix .j 2490 to 2965 1 to 472       472/963
(49 %)
7 diff
(99.3 %id)
AI765327 2 pooled tumors (clear cell type), Kidney .j 2506 to 2967 465 to 3       463/465
(99 %)
0 diff
(100 %id)
N94621.
matches multiple genes
senescent fibroblast .j 2547 to 2966 426 to 1     also hits gene bloply 426/426
(100 %)
7 diff
(98.4 %id)
D25640   .j 2642 to 2967 1 to 326     Submitted on the opposite strand 326/327
(99 %)
2 diff
(99.4 %id)
AA234468 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 2644 to 2962 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AI992349 Prostate .j 2647 to 2967 322 to 2       321/322
(99 %)
0 diff
(100 %id)
CB270118 adipose .j 2711 to 3254 1 to 546       546/557
(98 %)
5 diff
(99.2 %id)
AW613517 carcinoid, lung .j 2963 to 3156 194 to 1   tiling clone,   194/194
(100 %)
0 diff
(100 %id)
CN430229 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 2973 to 3549 1 to 578   tiling clone,   578/578
(100 %)
2 diff
(99.7 %id)
T08280   .j 3544 to 3927 1 to 385       385/385
(100 %)
1 diff
(99.8 %id)
R22642 whole brain .j 3545 to 4000 1 to 462   tiling clone,   462/462
(100 %)
6 diff
(98.8 %id)
DA888232   .j 3680 to 4258 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA647220 mammary gland .j 3700 to 4543 2 to 845   tiling clone, capped   844/855
(98 %)
5 diff
(99.5 %id)
BF762183 colon_est .j 3725 to 4166 440 to 1     Submitted on the opposite strand 440/447
(98 %)
4 diff
(99.2 %id)
DB210454 trachea .j 3823 to 4177 2 to 356   capped   355/355
(100 %)
0 diff
(100 %id)
BF372998 prostate_tumor .j 3848 to 4165 327 to 9       319/327
(97 %)
0 diff
(100 %id)
AK027199 Human lung .j 4017 to 6114 1 to 2099   tiling clone, available from FLJ, AAA   2099/2099
(100 %)
4 diff
(99.9 %id)
DA700070   .j 4051 to 4553 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
AW935288 denis_drash .j 4153 to 4467 337 to 20     Submitted on the opposite strand 318/337
(94 %)
0 diff
(100 %id)
BQ893537 dorsal root ganglia .j 4218 to 4792 1 to 575   tiling clone,   575/585
(98 %)
6 diff
(99.0 %id)
R34441 whole brain .j 4386 to 4817 1 to 451     Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 451/460
(98 %)
18 diff
(96.1 %id)
AA300168 uterus .j 4414 to 4714 1 to 303       303/303
(100 %)
3 diff
(99.1 %id)
AW957006   .j 4414 to 4896 1 to 481       481/551
(87 %)
26 diff
(95.3 %id)
BE886285 leiomyosarcoma, uterus .j 4538 to 5193 1 to 656       656/734
(89 %)
6 diff
(99.2 %id)
BM728464 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j 4545 to 5173 1 to 630       630/630
(100 %)
3 diff
(99.6 %id)
H22754.
matches multiple genes
whole brain .j 4893 to 5263 15 to 388     also hits gene HS6ST3 374/490
(76 %)
8 diff
(98.4 %id)
CU444547 epidermis .j 5041 to 5741 5 to 704       700/704
(99 %)
6 diff
(99.2 %id)
CU446048 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU447363 epidermis .j 5041 to 5745 5 to 708   tiling clone,   704/718
(98 %)
6 diff
(99.2 %id)
CU448061 epidermis .j 5041 to 5725 5 to 688       684/688
(99 %)
6 diff
(99.2 %id)
CU448377 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU448635 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU450956 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU451172 epidermis .j 5041 to 5705 5 to 668       664/668
(99 %)
7 diff
(99.0 %id)
CU451697 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU451918 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU452127 epidermis .j 5041 to 5745 5 to 708       704/715
(98 %)
6 diff
(99.2 %id)
CU452144 epidermis .j 5041 to 5698 5 to 661       657/661
(99 %)
7 diff
(99.0 %id)
CU452152 epidermis .j 5041 to 5739 5 to 702       698/702
(99 %)
8 diff
(98.9 %id)
CU454276 epidermis .j 5041 to 5688 5 to 650       646/650
(99 %)
6 diff
(99.1 %id)
CU455132 epidermis .j 5041 to 5745 5 to 708       704/718
(98 %)
6 diff
(99.2 %id)
CU456050 epidermis .j 5041 to 5745 5 to 708       704/717
(98 %)
5 diff
(99.4 %id)
CU456982 epidermis .j 5041 to 5696 5 to 659       655/659
(99 %)
6 diff
(99.1 %id)
BQ323798 colon_ins .j 5045 to 5551 506 to 1       506/506
(100 %)
4 diff
(99.3 %id)
CU444006 epidermis .j 5062 to 5706 1 to 645       645/645
(100 %)
0 diff
(100 %id)
CU443726 epidermis .j 5064 to 5632 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
BE717002 head_neck .j 5298 to 5771 473 to 2       472/487
(96 %)
0 diff
(100 %id)
H73510 liver and spleen .j 5446 to 5803 14 to 373       360/445
(80 %)
6 diff
(98.7 %id)
R09665 liver and spleen .j 5447 to 5795 1 to 357       357/357
(100 %)
11 diff
(97.0 %id)
AI146837 heart .j 5472 to 6114 643 to 1       643/643
(100 %)
0 diff
(100 %id)
BQ773677 Chondrosarcoma Grade II, Left Pelvis .j 5474 to 6129 674 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 656/656
(100 %)
0 diff
(100 %id)
BU742504 eye, fetal eye .j 5483 to 6114 651 to 19   AAA   633/633
(100 %)
1 diff
(99.9 %id)
BU732926 eye, Retina Foveal and Macular .j 5528 to 6114 605 to 19   AAA   587/596
(98 %)
1 diff
(99.9 %id)
TI_151770799   .j 5528 to 6116 113 to 707       595/1051
(56 %)
14 diff
(98.7 %id)
AA702679 liver and spleen .j 5561 to 6129 568 to 1       568/568
(100 %)
1 diff
(99.9 %id)
AW028083 brain, glioblastoma (pooled) .j 5577 to 6131 555 to 1       555/555
(100 %)
0 diff
(100 %id)
DB362077 mammary gland .j 5582 to 6131 550 to 1       550/553
(99 %)
6 diff
(99.0 %id)
DB350168 trachea .j 5590 to 6131 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
AA917668 adenocarcinoma, colon .j 5599 to 6087 489 to 1       489/489
(100 %)
0 diff
(100 %id)
DB323644   .j 5612 to 6131 520 to 1       520/520
(100 %)
1 diff
(99.9 %id)
BE856915 pooled .j 5619 to 6115 497 to 1       497/497
(100 %)
0 diff
(100 %id)
AI359341 brain, glioblastoma (pooled) .j 5663 to 6131 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AI911541 Kidney .j 5679 to 6131 453 to 1       453/453
(100 %)
1 diff
(99.8 %id)
AI018327 pooled .j 5693 to 6134 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AA114844 uterus .j 5698 to 5767 1 to 78   fully sequenced,   78/78
(100 %)
0 diff
(100 %id)
AI089994 uterus .j 5710 to 6143 435 to 1   tiling clone,   435/435
(100 %)
1 diff
(99.8 %id)
BE856840 pooled .j 5719 to 6123 415 to 11   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 405/405
(100 %)
1 diff
(99.8 %id)
BG950871 colon .j 5725 to 5950 19 to 246       228/246
(92 %)
6 diff
(97.6 %id)
AW780059 colon, moderately-differentiated adenocarcinoma .j 5733 to 5924 192 to 1       192/192
(100 %)
0 diff
(100 %id)
AA114845 uterus .j 5737 to 6128 392 to 1   fully sequenced,   392/392
(100 %)
0 diff
(100 %id)
R48975 whole brain .j 5756 to 6129 396 to 12   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 385/431
(89 %)
17 diff
(96.1 %id)
W01937 liver and spleen .j 5757 to 5898 1 to 144   fully sequenced,   144/144
(100 %)
2 diff
(98.7 %id)
H82704 liver and spleen .j 5758 to 6128 1 to 378       378/389
(97 %)
9 diff
(97.7 %id)
H22963 whole brain .j 5766 to 6142 390 to 1       390/399
(97 %)
10 diff
(97.5 %id)
W90177 liver and spleen .j 5776 to 6131 1 to 357   fully sequenced,   357/357
(100 %)
1 diff
(99.8 %id)
AW998162 breast_normal .j 5781 to 5936 161 to 6     Submitted on the opposite strand 156/180
(86 %)
0 diff
(100 %id)
AW021135 cochlea, ear .j 5788 to 6121 1 to 334   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 334/334
(100 %)
4 diff
(98.9 %id)
AA707081 liver and spleen .j 5792 to 5937 146 to 1       146/146
(100 %)
0 diff
(100 %id)
AW137054   .j 5795 to 6114 337 to 18   AAA   320/320
(100 %)
0 diff
(100 %id)
AI434753 lymph node, lymphoma, follicular mixed small and largecell .j 5831 to 5924 94 to 1       94/94
(100 %)
2 diff
(97.9 %id)
AI216421 pooled .j 5833 to 6135 303 to 1       303/303
(100 %)
0 diff
(100 %id)
BI492081 cochlea, ear .j 5833 to 6118 286 to 1   fully sequenced, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 286/286
(100 %)
0 diff
(100 %id)
N71039 liver and spleen .j 5868 to 6131 266 to 1   fully sequenced,   266/266
(100 %)
1 diff
(99.7 %id)
AA938933 pooled .j 5942 to 6143 204 to 1       204/204
(100 %)
6 diff
(97.1 %id)
W90590 liver and spleen .j 5994 to 6129 138 to 1   fully sequenced,   138/138
(100 %)
0 diff
(100 %id)
AK127391 thalamus .k 1 to 2645 2 to 2646 exact tiling clone, available from FLJ,   2646/2646
(100 %)
2 diff
(100.0 %id)
DA371421 thalamus .k 1 to 539 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BU430246 lymph .k 10 to 544 1 to 535       535/535
(100 %)
5 diff
(99.1 %id)
EC491340 Prostate .k 710 to 821 112 to 1       112/112
(100 %)
0 diff
(100 %id)
BX502714 Liver .l 1 to 532 1 to 532   tiling clone,   532/532
(100 %)
0 diff
(100 %id)
CN427195 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 221 to 972 12 to 763       752/763
(98 %)
6 diff
(99.3 %id)
DC414149 trachea .l 342 to 904 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC402789 testis .l 391 to 957 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
AK294328 amygdala .l 471 to 1258 1 to 788 exact tiling clone,   788/788
(100 %)
0 diff
(100 %id)
DC315716 amygdala .l 471 to 1019 1 to 549       549/549
(100 %)
0 diff
(100 %id)
AK304347 trachea .m 1 to 2579 1 to 2579 exact tiling clone,   2579/2579
(100 %)
3 diff
(99.9 %id)
DC418124 trachea .m 1 to 584 1 to 585 L51X I52N V53C I54H D55*     585/585
(100 %)
1 diff
(99.9 %id)
BU568728 testis .n 1 to 646 1 to 654   tiling clone,   654/836
(78 %)
16 diff
(98.1 %id)
AI417800 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .n 554 to 1054 501 to 1   tiling clone,   504/504
(100 %)
0 diff
(100 %id)
BX470767   .n 652 to 1294 1 to 646   tiling clone,   646/646
(100 %)
4 diff
(99.4 %id)
AI950985 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .n 669 to 1055 387 to 1       387/387
(100 %)
0 diff
(100 %id)
BU567455 testis .n 1159 to 1937 1 to 781 S141A T148D T149N N150Q L151S ... tiling clone,   781/785
(99 %)
8 diff
(99.0 %id)
DB450111.
matches multiple genes
testis .o 1 to 447 1 to 447 E2Q P126L tiling clone, also hits gene ACSM3 447/447
(100 %)
3 diff
(99.4 %id)
DA183731 amygdala .p-u 1 to 501 2 to 502 W119* tiling clone, capped   501/501
(100 %)
2 diff
(99.7 %id)
BP213357 cerebrum .q 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DA777902 brain .q 4 to 558 2 to 556 exact capped   555/555
(100 %)
2 diff
(99.7 %id)
DA773232 brain .q 5 to 553 2 to 552 Q35A R36K Q37A G38R S39L ... capped   551/551
(100 %)
3 diff
(99.5 %id)
DA860055 placenta .q 5 to 548 2 to 546 G78R G79R L80P Q81T P82A ... capped   545/545
(100 %)
2 diff
(99.7 %id)
DA074407 cerebellum .q 8 to 561 2 to 555 exact capped   554/554
(100 %)
1 diff
(99.9 %id)
DA241918 brain .q 8 to 578 2 to 572 exact capped   571/571
(100 %)
1 diff
(99.9 %id)
DA321973 hippocampus .q 8 to 641 2 to 637 exact tiling clone, capped   636/637
(99 %)
4 diff
(99.4 %id)
DA444804 tongue, tumor tissue .q 8 to 580 2 to 574 exact capped   573/573
(100 %)
1 diff
(99.9 %id)
DA937463 Spleen .q 8 to 613 2 to 608 R46Q S47L A48G L49A R50A ... tiling clone, capped   607/607
(100 %)
3 diff
(99.6 %id)
CN427203 embryonic stem cells, DMSO-treated H9 cellline .q 9 to 576 1 to 568 exact     568/568
(100 %)
3 diff
(99.5 %id)
DA686492   .q 24 to 502 2 to 482 R53Q A54G S56V A57S R58* capped   481/481
(100 %)
2 diff
(99.6 %id)
DA070386 cerebellum .r 1 to 446 6 to 451 exact tiling clone, capped   450/450
(100 %)
3 diff
(99.4 %id)
DA277846 corpus callosum .s 1 to 495 2 to 496   tiling clone, capped   495/495
(100 %)
0 diff
(100 %id)
AW117535 pooled .s 422 to 896 475 to 1   tiling clone,   475/475
(100 %)
3 diff
(99.4 %id)
AA971261 pooled .s 537 to 896 360 to 1       360/360
(100 %)
0 diff
(100 %id)
DA545688   .t 1 to 516 2 to 517 exact tiling clone, capped   516/516
(100 %)
1 diff
(99.9 %id)
BF989997 placenta_normal .t 194 to 765 14 to 585   tiling clone,   572/585
(97 %)
10 diff
(98.3 %id)
DA422657 cervix .u 1 to 551 10 to 561 exact tiling clone, capped   560/560
(100 %)
2 diff
(99.7 %id)
BX459493 brain, fetal brain .va 1 to 899 4 to 900 V78X K127X S139X tiling clone,   900/900
(100 %)
7 diff
(99.3 %id)
BX459494 brain, fetal brain .va 52 to 1098 1 to 1032   tiling clone,   1032/1039
(99 %)
18 diff
(98.3 %id)
FN152865 breast carcinoma .va 486 to 556 71 to 1     Submitted on the opposite strand 71/79
(89 %)
0 diff
(100 %id)
TI_149310688   .va 731 to 1614 946 to 72   tiling clone,   875/1037
(84 %)
22 diff
(97.9 %id)
BU688960 lung .va 850 to 1599 764 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 746/746
(100 %)
8 diff
(99.0 %id)
AL597167   .vb 1 to 419 5 to 423 exact     423/423
(100 %)
2 diff
(99.6 %id)
DA414626 thalamus .vb 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DA823940 pericardium .vb 1 to 503 2 to 504 exact capped   503/503
(100 %)
0 diff
(100 %id)
CF994615 Human Placenta, placenta .vb 5 to 740 21 to 762 exact     742/838
(88 %)
26 diff
(96.9 %id)
DB455128.
matches multiple genes
testis .vb 12 to 486 1 to 475 exact   also hits gene ACSM3 475/475
(100 %)
0 diff
(100 %id)
DB455686 testis .vb 12 to 493 1 to 482 exact     482/482
(100 %)
1 diff
(99.8 %id)
DA798640 brain .vb 13 to 566 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA461305 tongue, tumor tissue .vb 16 to 559 2 to 550 A2L A10G G11R G12W I13H ... capped   549/549
(100 %)
5 diff
(99.1 %id)
DA477080   .vb 17 to 581 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA898999 skeletal muscle .vb 17 to 509 2 to 494 exact capped   493/493
(100 %)
0 diff
(100 %id)
DA628562 Kidney .vb 20 to 557 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
BG824918 muscle, rhabdomyosarcoma .vb 21 to 740 1 to 721 A4V A10E G11V G12A I13S ...     721/721
(100 %)
51 diff
(93.0 %id)
DB453508.
matches multiple genes
testis .vb 38 to 537 1 to 500 exact   also hits gene ACSM3 500/504
(99 %)
2 diff
(99.7 %id)
DB449506.
matches multiple genes
testis .vb 39 to 462 1 to 423 exact   also hits gene ACSM3 423/423
(100 %)
1 diff
(99.8 %id)
DB461339.
matches multiple genes
testis .vb 39 to 514 1 to 476 exact   also hits gene ACSM3 476/476
(100 %)
0 diff
(100 %id)
CA866498 Pancreas, Purified pancreatic islet .vb 59 to 589 1 to 531 exact     531/531
(100 %)
0 diff
(100 %id)
CK903073 Pancreas, Purified pancreatic islet .vb 61 to 563 1 to 503 exact   Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
DA212763 brain .vb 78 to 561 2 to 485 exact capped   484/484
(100 %)
0 diff
(100 %id)
AL705016 human skeletal muscle .vb 97 to 687 1 to 591 exact     591/591
(100 %)
2 diff
(99.7 %id)
DA714683   .vb 97 to 633 2 to 538 exact capped   537/537
(100 %)
1 diff
(99.9 %id)
DA810766 brain .vb 101 to 658 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB288098 uterus .vb 120 to 683 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AV727791 hypothalamus .vb 168 to 571 1 to 404       404/404
(100 %)
0 diff
(100 %id)
T05728   .vb 216 to 608 1 to 394       394/394
(100 %)
2 diff
(99.5 %id)
CA866766 Pancreas, Purified pancreatic islet .vb 226 to 696 471 to 1       471/471
(100 %)
0 diff
(100 %id)
DA318605 hippocampus .vb 338 to 900 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB068547 testis .vc 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
DB086716 testis .vc 30 to 602 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
AL704101 human skeletal muscle .vd 1 to 587 1 to 587 exact tiling clone,   587/587
(100 %)
3 diff
(99.5 %id)
AL704082 human skeletal muscle .vd 2 to 601 1 to 600 exact tiling clone,   600/600
(100 %)
0 diff
(100 %id)
DA757692   .ve 1 to 551 10 to 563 A2L A10G G11R G12W I13H ... tiling clone, capped   562/562
(100 %)
4 diff
(99.3 %id)
DB068625 testis .vf 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
DB134266 thymus .vh-u 1 to 451 2 to 452 exact tiling clone, capped   451/451
(100 %)
1 diff
(99.8 %id)
AI299974 carcinoid, lung .vi 1 to 424 1 to 424 exact tiling clone, Submitted on the opposite strand 424/424
(100 %)
1 diff
(99.8 %id)
AW835696 leiomios .vj-u 1 to 316 1 to 316 I6S tiling clone,   316/316
(100 %)
4 diff
(98.8 %id)
AL580988 T cells from T cell leukemia Gene DCUN1D3andERI2andTHUMPD1, variant not shown         Suspected internal deletion, this clone was ignored    
AL119361 amygdala Gene DCUN1D3andERI2andTHUMPD1, variant not shown              
DB062228.
matches multiple genes
testis Gene DCUN1D3andERI2andTHUMPD1, variant not shown       capped This clone was ignored, also hits gene sworpu    
DB062228.
matches multiple genes
testis Gene sworpu, variant not shown       capped This clone was ignored, also hits gene sworpu    
DB339371.
matches multiple genes
testis Gene DCUN1D3andERI2andTHUMPD1, variant not shown         This clone was ignored, also hits gene sworpu    
DB339371.
matches multiple genes
testis Gene sworpu, variant not shown         This clone was ignored, also hits gene sworpu    
73 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg-u, .vh-u, .vi, .vj-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C