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Gene THAP4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
408 supporting clones for gene THAP4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU146269 brain, neuroblastoma, cell line .a 1 to 721 1 to 724   tiling clone,   724/955
(75 %)
16 diff
(98.4 %id)
BX405245 T cells (Jurkat cell line) .a 118 to 1186 1 to 1051       1051/1051
(100 %)
47 diff
(95.6 %id)
NM_015963.5   .a 140 to 2366 1 to 2227   RefSeq, AAA   2227/2227
(100 %)
0 diff
(100 %id)
BX344424   .a 148 to 1000 1 to 850       850/855
(99 %)
7 diff
(99.2 %id)
BX383068   .a 148 to 1102 1 to 939       939/949
(98 %)
22 diff
(97.7 %id)
BX332109 Neuroblastoma Cot 25-normalized .a 163 to 839 1 to 677       677/677
(100 %)
0 diff
(100 %id)
CT005027 T-Lymphocytes .a 163 to 571 1 to 409       409/409
(100 %)
8 diff
(98.1 %id)
BC069235 Ovary, teratocarcinoma .a 210 to 2366 1 to 2157   tiling clone, available from MGC, AAA   2157/2157
(100 %)
1 diff
(100.0 %id)
BU855662 ovary, teratocarcinoma, cell line .a 211 to 981 1 to 774       774/1002
(77 %)
21 diff
(98.0 %id)
BX421047 brain, fetal brain .a 212 to 1085 1 to 875       875/875
(100 %)
8 diff
(99.1 %id)
AL520036 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 217 to 1314 13 to 1101   fully sequenced,   1089/1101
(98 %)
60 diff
(94.6 %id)
BM547804 brain, hippocampus .a 247 to 944 1 to 701       701/1173
(59 %)
20 diff
(98.3 %id)
BQ072872 leukocyte .a 281 to 822 13 to 555       543/1449
(37 %)
17 diff
(98.9 %id)
AW162939 brain, frontal lobe .a 289 to 693 1 to 405       405/405
(100 %)
9 diff
(97.8 %id)
BX341912   .a 303 to 1308 1 to 1002   fully sequenced,   1002/1002
(100 %)
8 diff
(99.3 %id)
BX383921   .a 304 to 1241 11 to 949       939/949
(98 %)
14 diff
(98.6 %id)
BX384315   .a 304 to 1218 11 to 922       912/922
(98 %)
12 diff
(98.7 %id)
BX332177 Neuroblastoma Cot 25-normalized .a 306 to 1385 1 to 1064       1064/1111
(95 %)
27 diff
(97.6 %id)
BX375377 Neuroblastoma Cot 25-normalized .a 306 to 1305 1 to 988   fully sequenced,   988/988
(100 %)
10 diff
(99.0 %id)
BX343425 Neuroblastoma Cot 25-normalized .a 308 to 1299 1 to 991       991/991
(100 %)
8 diff
(99.2 %id)
BX421777 T cells (Jurkat cell line) .a 309 to 1231 1 to 920       920/1009
(91 %)
26 diff
(97.5 %id)
BG394703 eye, retinoblastoma .a 312 to 1070 1 to 764       764/950
(80 %)
13 diff
(98.7 %id)
BG471500 eye, retinoblastoma .a 312 to 855 1 to 542       542/542
(100 %)
7 diff
(98.8 %id)
BX332625 Neuroblastoma Cot 25-normalized .a 315 to 1275 1 to 959       959/959
(100 %)
6 diff
(99.4 %id)
BX376611 Neuroblastoma Cot 50-normalized .a 315 to 1120 1 to 808       808/808
(100 %)
23 diff
(97.2 %id)
CN368009 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 320 to 835 37 to 552       516/552
(93 %)
7 diff
(98.8 %id)
BG472327 eye, retinoblastoma .a 326 to 1101 1 to 778       778/778
(100 %)
9 diff
(98.9 %id)
BG474591 eye, retinoblastoma .a 326 to 967 1 to 663       663/789
(84 %)
47 diff
(94.1 %id)
BI914511 brain .a 334 to 1057 1 to 728       728/728
(100 %)
5 diff
(99.4 %id)
TI_57241524   .a 334 to 1057 36 to 763       728/763
(95 %)
9 diff
(98.9 %id)
AL517205 brain, neuroblastoma, neuroblastoma cells .a 337 to 1333 1 to 983   fully sequenced,   983/983
(100 %)
35 diff
(96.5 %id)
AL529042 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 337 to 1213 1 to 874       874/874
(100 %)
8 diff
(99.1 %id)
BU153802 eye, retinoblastoma .a 340 to 1201 1 to 877       877/879
(99 %)
21 diff
(97.7 %id)
BE887151 leiomyosarcoma, uterus .a 342 to 878 1 to 537       537/537
(100 %)
0 diff
(100 %id)
TI_57239674   .a 343 to 1189 99 to 949       851/949
(89 %)
13 diff
(98.7 %id)
BI916156 brain .a 344 to 1189 1 to 850       850/850
(100 %)
7 diff
(99.2 %id)
TI_57165144   .a 363 to 1042 57 to 746       690/1198
(57 %)
25 diff
(98.0 %id)
CN368010 embryonic stem cells, cell lines H1, H7, andH9 .a 365 to 1001 15 to 652       638/652
(97 %)
7 diff
(99.0 %id)
AL559902 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 366 to 1374 1 to 1000   fully sequenced,   1000/1000
(100 %)
12 diff
(98.8 %id)
BI762574 pooled colon, kidney, stomach .a 366 to 968 1 to 609       609/612
(99 %)
12 diff
(98.1 %id)
TI_57148024   .a 366 to 1239 29 to 916       888/1017
(87 %)
43 diff
(95.8 %id)
TI_57150472   .a 366 to 968 34 to 642       609/645
(94 %)
11 diff
(98.3 %id)
BG116061 duodenal adenocarcinoma, cell line, small intestine .a 368 to 1114 6 to 754       749/922
(81 %)
34 diff
(96.4 %id)
BI334694 cervical carcinoma cell line, cervix .a 368 to 962 6 to 605       600/605
(99 %)
12 diff
(98.1 %id)
DB465133 hippocampus .a 370 to 800 1 to 431       431/431
(100 %)
3 diff
(99.4 %id)
BQ072916 leukocyte .a 370 to 1221 8 to 871       864/1059
(81 %)
26 diff
(97.6 %id)
BI760190 pooled colon, kidney, stomach .a 371 to 1239 1 to 883       883/984
(89 %)
37 diff
(96.3 %id)
BM564744 eye, retinoblastoma .a 371 to 1076 1 to 711       711/1121
(63 %)
25 diff
(97.8 %id)
AL534539 brain, fetal brain .a 372 to 1203 1 to 831       831/831
(100 %)
4 diff
(99.6 %id)
BI838642 pooled pancreas and spleen .a 372 to 1042 1 to 681       681/1133
(60 %)
20 diff
(98.3 %id)
BX331495 Neuroblastoma Cot 10-normalized .a 374 to 1269 1 to 893       893/897
(99 %)
5 diff
(99.5 %id)
BX335768 Placenta Cot 25-normalized .a 374 to 1309 1 to 922       922/922
(100 %)
65 diff
(93.0 %id)
BX438449 neuroblastoma .a 378 to 644 1 to 268       268/268
(100 %)
2 diff
(99.3 %id)
BX354139 Neuroblastoma Cot 25-normalized .a 378 to 1275 1 to 893       893/896
(99 %)
8 diff
(99.2 %id)
BF345413 anaplastic oligodendroglioma with 1p/19qloss, brain .a 378 to 1154 17 to 777       761/965
(78 %)
34 diff
(96.5 %id)
TI_57181994   .a 380 to 1289 30 to 948       919/948
(96 %)
29 diff
(97.0 %id)
AL530558 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 384 to 1338 1 to 943   fully sequenced,   943/943
(100 %)
20 diff
(97.9 %id)
TI_57219752   .a 384 to 1025 60 to 696       637/697
(91 %)
7 diff
(99.0 %id)
BI770868 pooled lung and spleen .a 386 to 1289 1 to 913       913/913
(100 %)
24 diff
(97.4 %id)
AF258556   .a 388 to 2366 1 to 1979   AAA   1979/1979
(100 %)
3 diff
(99.9 %id)
TI_57198761   .a 388 to 1197 59 to 871       813/872
(93 %)
19 diff
(97.9 %id)
BP202236 amygdala .a 390 to 970 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AL544881 placenta, Placenta Cot 25-normalized .a 391 to 1448 1 to 1057   fully sequenced,   1057/1057
(100 %)
16 diff
(98.5 %id)
BI752928 brain .a 391 to 1025 1 to 631       631/632
(99 %)
5 diff
(99.3 %id)
BI822663 pooled brain, lung, testis .a 394 to 1197 1 to 807       807/808
(99 %)
13 diff
(98.4 %id)
BI910283 leukocyte .a 396 to 989 1 to 603       603/1030
(58 %)
28 diff
(97.3 %id)
BQ941269 large cell carcinoma, lung .a 396 to 1295 1 to 911       911/912
(99 %)
24 diff
(97.4 %id)
TI_57236157   .a 396 to 989 35 to 637   AAA   603/1043
(57 %)
34 diff
(96.8 %id)
EC502800 Prostate .a 397 to 493 9 to 106       98/106
(92 %)
6 diff
(94.4 %id)
BI767668 pooled lung and spleen .a 397 to 1338 1 to 943       943/959
(98 %)
29 diff
(97.0 %id)
TI_57183673   .a 397 to 1338 35 to 977       943/993
(94 %)
35 diff
(96.5 %id)
BU165299 eye, retinoblastoma .a 398 to 1246 1 to 854       854/856
(99 %)
29 diff
(96.7 %id)
BM906243 ovary (pool of 3) .a 401 to 1252 12 to 874       863/1084
(79 %)
29 diff
(97.4 %id)
BQ942495 large cell carcinoma, lung .a 407 to 1357 1 to 955       955/956
(99 %)
21 diff
(97.9 %id)
EC501729 Prostate .a 408 to 507 1 to 100       100/100
(100 %)
0 diff
(100 %id)
AA298109 heart .a 412 to 727 1 to 315       315/315
(100 %)
1 diff
(99.7 %id)
BE886067 leiomyosarcoma, uterus .a 431 to 879 1 to 449       449/449
(100 %)
0 diff
(100 %id)
BF686560 leiomyosarcoma cell line, uterus .a 435 to 1259 1 to 824       824/948
(86 %)
37 diff
(96.1 %id)
BG490646 large cell carcinoma, lung .a 435 to 1339 1 to 888       888/915
(97 %)
36 diff
(96.1 %id)
BG761331 melanotic melanoma, high MDR (cell line), skin .a 443 to 1251 1 to 810       810/812
(99 %)
9 diff
(98.9 %id)
BE870562 adenocarcinoma, colon .a 444 to 879 1 to 436       436/436
(100 %)
5 diff
(98.9 %id)
BM476191 duodenal adenocarcinoma, cell line, small intestine .a 453 to 1465 7 to 1035   tiling clone,   1029/1068
(96 %)
40 diff
(96.3 %id)
BI017347 lung_tumor .a 456 to 942 15 to 504       490/504
(97 %)
18 diff
(96.5 %id)
BI017349 lung_tumor .a 456 to 1025 17 to 583       567/583
(97 %)
10 diff
(98.3 %id)
BU507001 leiomyosarcoma, uterus .a 465 to 1350 12 to 900       889/901
(98 %)
20 diff
(97.8 %id)
BM465494 eye, retinoblastoma .a 481 to 919 26 to 464       439/1253
(35 %)
10 diff
(99.3 %id)
N47839 placenta .a 500 to 683 1 to 187       187/187
(100 %)
3 diff
(98.4 %id)
BI017348 lung_tumor .a 501 to 945 26 to 464       439/464
(94 %)
6 diff
(98.8 %id)
TI_159676478   .a 504 to 1246 100 to 841       742/1031
(71 %)
6 diff
(99.5 %id)
BE384014 melanotic melanoma, skin .a 508 to 1282 8 to 776       769/840
(91 %)
9 diff
(99.0 %id)
BU783664 insulinoma, Pancreas .a 508 to 1069 18 to 579       562/579
(97 %)
6 diff
(99.0 %id)
BQ933580 epidermoid carcinoma, cell line, lung .a 508 to 1141 11 to 646       636/852
(74 %)
4 diff
(99.6 %id)
BX358040 Placenta Cot 25-normalized .a 515 to 1367 1 to 851       851/851
(100 %)
4 diff
(99.6 %id)
CX785131 human embryonic stem cells .a 529 to 987 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
EC468926 Prostate .a 551 to 637 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
Z25289 leg muscle, skeletal muscle .a 562 to 882 1 to 319       319/320
(99 %)
4 diff
(98.8 %id)
BQ218183 epithelioid carcinoma, Pancreas .a 569 to 1305 1 to 755       755/957
(78 %)
28 diff
(97.1 %id)
BM789094 Ascites, stomach .a 572 to 1147 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CN368006 embryonic stem cells, cell lines H1, H7, andH9 .a 592 to 1290 1 to 697       697/697
(100 %)
3 diff
(99.6 %id)
EC462425 Prostate .a 597 to 691 1 to 95       95/95
(100 %)
2 diff
(97.9 %id)
EC534651 Prostate .a 598 to 690 1 to 93       93/93
(100 %)
0 diff
(100 %id)
BC009439 Brain, neuroblastoma .a 602 to 2344 1 to 1743   available from MGC, AAA   1743/1743
(100 %)
2 diff
(99.9 %id)
BI196071 brain, neuroblastoma .a 603 to 1235 1 to 634       634/634
(100 %)
3 diff
(99.6 %id)
BQ433719 large cell carcinoma, lung .a 609 to 1368 1 to 762       762/941
(80 %)
16 diff
(98.3 %id)
EC450026 Prostate .a 625 to 725 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BF032491 adenocarcinoma, ovary .a 634 to 879 1 to 244       244/244
(100 %)
7 diff
(97.2 %id)
BX324573 Neuroblastoma Cot 25-normalized .a 638 to 1518 1 to 882       882/882
(100 %)
16 diff
(98.2 %id)
N59715 liver and spleen .a 644 to 977 1 to 334       334/336
(99 %)
15 diff
(95.6 %id)
BG117228 adenocarcinoma, cell line, Liver .a 651 to 1339 1 to 682       682/947
(72 %)
16 diff
(98.4 %id)
EC502616 Prostate .a 656 to 755 1 to 100       100/101
(99 %)
3 diff
(97.1 %id)
BE745007 adenocarcinoma cell line, ovary .a 662 to 1311 1 to 669       669/722
(92 %)
18 diff
(97.6 %id)
DN993674 brain, whole brain .a 665 to 1398 1 to 732       732/732
(100 %)
7 diff
(99.1 %id)
AA192115 muscle, skeletal muscle .a 675 to 1075 1 to 399       399/399
(100 %)
9 diff
(97.8 %id)
BF769104 epid_tumor .a 691 to 1094 453 to 51     Submitted on the opposite strand 403/453
(88 %)
0 diff
(100 %id)
BQ072617 leukocyte .a 697 to 1588 1 to 899       899/1033
(87 %)
25 diff
(97.6 %id)
CD627347   .a 698 to 1486 1 to 796       796/796
(100 %)
12 diff
(98.5 %id)
BC000247 Eye, retinoblastoma .a 698 to 2344 1 to 1647   available from MGC, AAA   1647/1647
(100 %)
0 diff
(100 %id)
TI_151772283   .a 715 to 1282 104 to 666       563/916
(61 %)
11 diff
(98.8 %id)
BE255202 eye, retinoblastoma .a 717 to 1357 1 to 637   available from MGC,   637/639
(99 %)
5 diff
(99.3 %id)
BM716376 eye, RPE and Choroid .a 717 to 1118 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
BU527867 epidermoid carcinoma, cell line, lung .a 724 to 1541 36 to 858       823/946
(86 %)
14 diff
(98.6 %id)
BP314772 mammary gland .a 733 to 1176 1 to 443       443/450
(98 %)
3 diff
(99.4 %id)
BP314792 mammary gland .a 733 to 1176 1 to 443       443/450
(98 %)
3 diff
(99.4 %id)
BQ361534 ovary .a 745 to 1157 426 to 13       414/426
(97 %)
10 diff
(97.7 %id)
CD627348   .a 762 to 1587 829 to 1       829/829
(100 %)
13 diff
(98.5 %id)
BM707540 eye, eye anterior segment .a 773 to 1020 4 to 252   fully sequenced,   249/252
(98 %)
6 diff
(97.7 %id)
BU175952 epithelioid carcinoma, Pancreas .a 775 to 1381 12 to 619       608/813
(74 %)
5 diff
(99.4 %id)
BM794872 Ascites, stomach .a 779 to 1477 1 to 699       699/699
(100 %)
1 diff
(99.9 %id)
BE622038 melanotic melanoma, skin .a 799 to 878 1 to 80       80/80
(100 %)
0 diff
(100 %id)
BM471597 eye, retinoblastoma .a 808 to 1774 13 to 979       967/1042
(92 %)
18 diff
(98.3 %id)
BG766207 melanotic melanoma, high MDR (cell line), skin .a 814 to 1400 1 to 589       589/592
(99 %)
4 diff
(99.4 %id)
AA312266   .a 815 to 1183 1 to 372       372/372
(100 %)
4 diff
(99.0 %id)
BM151378 leukopheresis .a 828 to 1193 1 to 366       366/366
(100 %)
1 diff
(99.8 %id)
AA055675 colon, tumor .a 848 to 1125 1 to 278       278/299
(92 %)
6 diff
(98.0 %id)
BX358090 Placenta Cot 25-normalized .a 857 to 1363 454 to 947       494/502
(98 %)
8 diff
(98.5 %id)
AI205270 brain, meningioma .a 864 to 1205 1 to 342     Submitted on the opposite strand 342/342
(100 %)
0 diff
(100 %id)
CN368005 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 912 to 1633 9 to 732       724/732
(98 %)
6 diff
(99.2 %id)
BG742267 skin .a 916 to 1196 261 to 541       316/541
(58 %)
12 diff
(97.8 %id)
BF799139 colon_ins .a 924 to 1339 417 to 4     Submitted on the opposite strand 414/417
(99 %)
0 diff
(100 %id)
CD627346   .a 936 to 1435 8 to 507       500/507
(98 %)
6 diff
(98.9 %id)
BF829533 head_normal .a 942 to 1311 369 to 1     Submitted on the opposite strand 369/369
(100 %)
3 diff
(99.2 %id)
AW796135 uterus .a 946 to 1470 1 to 542       542/542
(100 %)
63 diff
(88.4 %id)
BM912413 amelanotic melanoma, cell line, skin .a 948 to 1721 23 to 796       774/1076
(71 %)
14 diff
(98.7 %id)
BM794848 Ascites, stomach .a 951 to 1531 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BM673377 eye, eye anterior segment .a 990 to 1344 389 to 35   fully sequenced, AAA   355/371
(95 %)
4 diff
(99.0 %id)
BM793363 Ascites, stomach .a 1012 to 1599 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
BQ960363 epidermoid carcinoma, cell line, lung .a 1018 to 1784 1 to 767       767/983
(78 %)
9 diff
(99.1 %id)
BE548086 cervical carcinoma cell line, cervix .a 1034 to 1670 1 to 636       636/871
(73 %)
13 diff
(98.6 %id)
CR977573 T-Lymphocytes .a 1048 to 1767 1 to 719       719/721
(99 %)
3 diff
(99.6 %id)
BM548312 brain, hippocampus .a 1066 to 1952 18 to 906       889/1064
(83 %)
21 diff
(98.1 %id)
BI821577 pooled brain, lung, testis .a 1067 to 1672 1 to 606       606/624
(97 %)
2 diff
(99.7 %id)
TI_57199268   .a 1067 to 1672 67 to 672       606/690
(87 %)
2 diff
(99.8 %id)
EL953982 eyeball .a 1072 to 1604 1 to 533       533/533
(100 %)
2 diff
(99.7 %id)
AA378932 synovial membrane .a 1075 to 1369 1 to 296       296/296
(100 %)
3 diff
(99.0 %id)
BE182810 head_neck .a 1088 to 1327 1 to 238       238/238
(100 %)
2 diff
(99.2 %id)
BG121087 adenocarcinoma, cell line, Liver .a 1092 to 1772 1 to 672       672/879
(76 %)
24 diff
(97.3 %id)
AK001216   .a 1093 to 2351 1 to 1259   available from FLJ,   1259/1259
(100 %)
1 diff
(100.0 %id)
AU123860   .a 1094 to 1814 2 to 730   capped   729/729
(100 %)
14 diff
(98.1 %id)
Z42837 brain, total brain .a 1095 to 1403 1 to 309       309/309
(100 %)
2 diff
(99.4 %id)
T33901 brain .a 1095 to 1325 1 to 231       231/231
(100 %)
2 diff
(99.2 %id)
BQ370997 prostate_normal .a 1098 to 1304 209 to 5       205/215
(95 %)
0 diff
(100 %id)
BX327581   .a 1109 to 2036 1 to 925       925/929
(99 %)
25 diff
(97.4 %id)
BM820274 stomach .a 1109 to 1770 1 to 662       662/662
(100 %)
1 diff
(99.9 %id)
BM820150 stomach .a 1109 to 1525 1 to 417       417/417
(100 %)
1 diff
(99.8 %id)
BF528421 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1118 to 1834 1 to 716       716/807
(88 %)
6 diff
(99.3 %id)
Z25129 leg muscle, skeletal muscle .a 1125 to 1457 1 to 334       334/337
(99 %)
10 diff
(97.1 %id)
BM018362 astrocytoma grade IV, cell line, brain .a 1134 to 1971 1 to 853       853/853
(100 %)
25 diff
(97.1 %id)
TI_59388950   .a 1135 to 1971 96 to 947       852/852
(100 %)
24 diff
(97.2 %id)
CN368004 embryonic stem cells, cell lines H1, H7, andH9 .a 1138 to 1519 11 to 392       382/392
(97 %)
6 diff
(98.5 %id)
BF379413 uterus_tumor .a 1145 to 1633 488 to 1       498/498
(100 %)
5 diff
(99.0 %id)
BF379414 uterus_tumor .a 1145 to 1648 513 to 10       504/523
(96 %)
0 diff
(100 %id)
BF379416 uterus_tumor .a 1145 to 1655 512 to 4       509/522
(97 %)
0 diff
(100 %id)
BF379420 uterus_tumor .a 1145 to 1647 523 to 20       504/533
(94 %)
0 diff
(100 %id)
BF856692 prostate_tumor .a 1145 to 1314 191 to 21     Submitted on the opposite strand 171/191
(89 %)
0 diff
(100 %id)
T27464   .a 1146 to 1321 1 to 177       177/184
(96 %)
5 diff
(97.3 %id)
CD675131 eye, lens .a 1161 to 1766 1 to 606       606/606
(100 %)
0 diff
(100 %id)
CN368008 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1167 to 1871 1 to 708       708/708
(100 %)
6 diff
(99.2 %id)
BQ219017 epithelioid carcinoma, Pancreas .a 1167 to 1918 1 to 757       757/870
(87 %)
13 diff
(98.6 %id)
BQ684701 melanotic melanoma, cell line, skin .a 1168 to 2053 22 to 906       885/1022
(86 %)
14 diff
(98.7 %id)
CF121217 CNCAP(3)T-225 cell line, Prostate .a 1169 to 1778 7 to 614       608/614
(99 %)
4 diff
(99.4 %id)
TI_154180224   .a 1169 to 1948 72 to 852       781/839
(93 %)
13 diff
(98.5 %id)
BC071896 Skin, melanoma, melanotic .a 1174 to 2366 1 to 1193   available from MGC, AAA   1193/1193
(100 %)
0 diff
(100 %id)
BC094822 Skin, melanoma, melanotic .a 1174 to 2366 1 to 1193   AAA   1193/1193
(100 %)
0 diff
(100 %id)
T18535   .a 1175 to 1335 1 to 160       160/160
(100 %)
3 diff
(98.2 %id)
BU162469 melanotic melanoma, cell line, skin .a 1175 to 1948 1 to 775   available from MGC,   775/830
(93 %)
3 diff
(99.7 %id)
T29964 Pancreas .a 1188 to 1513 1 to 326       326/331
(98 %)
5 diff
(98.5 %id)
BG391233 embryonal carcinoma, cell line, testis .a 1199 to 2044 1 to 857       857/1035
(82 %)
33 diff
(96.9 %id)
BG949241 breast .a 1204 to 1406 10 to 212       203/212
(95 %)
6 diff
(97.2 %id)
N55644   .a 1217 to 1522 1 to 305       305/305
(100 %)
11 diff
(96.4 %id)
AW410329 muscle, rhabdomyosarcoma .a 1225 to 1771 27 to 574   available from MGC,   548/574
(95 %)
6 diff
(99.0 %id)
CU447796 epidermis .a 1234 to 1626 411 to 19     Submitted on the opposite strand 393/411
(95 %)
0 diff
(100 %id)
BX447793 T cells (Jurkat cell line) .a 1244 to 2331 1079 to 1       1079/1127
(95 %)
29 diff
(97.5 %id)
BE813850 breast_normal .a 1262 to 1672 430 to 22       409/430
(95 %)
0 diff
(100 %id)
BX375376 Neuroblastoma Cot 25-normalized .a 1275 to 2304 1015 to 1   fully sequenced,   1015/1015
(100 %)
17 diff
(98.4 %id)
BX341911   .a 1278 to 2315 1023 to 1   fully sequenced,   1023/1023
(100 %)
28 diff
(97.3 %id)
BM018207 astrocytoma grade IV, cell line, brain .a 1279 to 1641 158 to 530       506/531
(95 %)
17 diff
(96.8 %id)
TI_59388791   .a 1279 to 1641 214 to 586       505/530
(95 %)
16 diff
(97.0 %id)
AL520035 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1298 to 2310 1010 to 5   fully sequenced,   1006/1010
(99 %)
24 diff
(97.7 %id)
AL517204 brain, neuroblastoma, neuroblastoma cells .a 1303 to 2305 1050 to 55   fully sequenced,   996/1050
(94 %)
18 diff
(98.3 %id)
AL563777 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1308 to 2313 1003 to 1   fully sequenced,   1003/1003
(100 %)
38 diff
(96.3 %id)
CA495405   .a 1313 to 2181 1 to 871       871/871
(100 %)
6 diff
(99.4 %id)
BF529679 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1318 to 2145 1 to 832       832/1071
(77 %)
18 diff
(98.4 %id)
BF529678 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1321 to 2106 1 to 790       790/823
(95 %)
27 diff
(96.8 %id)
CU454702 epidermis .a 1337 to 1626 308 to 19     Submitted on the opposite strand 290/313
(92 %)
0 diff
(100 %id)
AL581427 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 1344 to 2053 980 to 277   fully sequenced, AAA   704/967
(72 %)
8 diff
(99.2 %id)
CD579734 brain .a 1358 to 1943 1 to 587       587/662
(88 %)
13 diff
(98.1 %id)
BX375787 Neuroblastoma Cot 25-normalized .a 1370 to 1863 1 to 494   fully sequenced,   494/494
(100 %)
0 diff
(100 %id)
CB157744 Liver .a 1371 to 1843 1 to 473       473/473
(100 %)
0 diff
(100 %id)
AL563324 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1394 to 2304 904 to 1       904/904
(100 %)
31 diff
(96.6 %id)
BX354138 Neuroblastoma Cot 25-normalized .a 1395 to 2338 944 to 1       944/944
(100 %)
13 diff
(98.7 %id)
BX421046 brain, fetal brain .a 1406 to 2045 640 to 1       544/640
(85 %)
38 diff
(94.1 %id)
TI_1948090659   .a 1407 to 1871 131 to 595       465/493
(94 %)
6 diff
(98.8 %id)
TI_1948090747   .a 1407 to 1863 127 to 584   fully sequenced,   458/485
(94 %)
8 diff
(98.4 %id)
CV029895 mixed .a 1408 to 2034 1 to 626       626/627
(99 %)
3 diff
(99.6 %id)
CV029960 mixed .a 1408 to 1903 1 to 496       496/582
(85 %)
1 diff
(99.9 %id)
BX344423   .a 1412 to 2310 894 to 1       894/894
(100 %)
11 diff
(98.8 %id)
BI257535 cervical carcinoma cell line, cervix .a 1418 to 2233 1 to 822       822/823
(99 %)
17 diff
(98.0 %id)
BG254908 adenocarcinoma, cell line, Prostate .a 1423 to 2213 8 to 795       788/797
(98 %)
18 diff
(97.8 %id)
AW362094 colon .a 1426 to 1771 1 to 346       346/350
(98 %)
10 diff
(97.2 %id)
BX358039 Placenta Cot 25-normalized .a 1430 to 2309 883 to 6       878/883
(99 %)
22 diff
(97.6 %id)
TI_154127203   .a 1434 to 2344 996 to 95   AAA   902/981
(91 %)
22 diff
(97.8 %id)
AL570837 placenta, Placenta Cot 25-normalized .a 1444 to 2256 838 to 29   fully sequenced,   810/838
(96 %)
10 diff
(98.9 %id)
AL565556 brain, fetal brain .a 1454 to 2334 880 to 1       880/880
(100 %)
11 diff
(98.8 %id)
BE881447 large cell carcinoma, undifferentiated, lung .a 1454 to 2196 1 to 728       728/922
(78 %)
30 diff
(96.8 %id)
AA361042   .a 1461 to 1834 1 to 372       372/400
(93 %)
10 diff
(97.5 %id)
BQ230677 epithelioid carcinoma, Pancreas .a 1466 to 2331 1 to 866       866/867
(99 %)
3 diff
(99.7 %id)
BF684593 leiomyosarcoma cell line, uterus .a 1475 to 2196 1 to 749       653/964
(67 %)
49 diff
(95.0 %id)
TI_159715287   .a 1476 to 2366 987 to 100   AAA   888/1037
(85 %)
17 diff
(98.4 %id)
BG114188 Bone, osteosarcoma, cell line .a 1498 to 2240 1 to 745       745/759
(98 %)
13 diff
(98.3 %id)
BG287108 bladder, transitional cell papilloma, cell line .a 1502 to 2302 1 to 808       808/1071
(75 %)
24 diff
(97.8 %id)
TI_59392649   .a 1511 to 2243 82 to 813       732/732
(100 %)
1 diff
(99.9 %id)
BM014606 breast, mammary adenocarcinoma, cell line .a 1512 to 2243 1 to 731       731/731
(100 %)
1 diff
(99.9 %id)
CD627345   .a 1536 to 2110 587 to 12       576/587
(98 %)
8 diff
(98.7 %id)
BU633374 cell lines, Chondrosarcoma .a 1563 to 2344 802 to 19   AAA   784/786
(99 %)
4 diff
(99.5 %id)
CA416944 Chondrosarcoma Cell line .a 1576 to 2344 787 to 19   AAA   769/769
(100 %)
3 diff
(99.7 %id)
BE876222 large cell carcinoma, undifferentiated, lung .a 1584 to 2343 1 to 760   AAA   760/760
(100 %)
5 diff
(99.4 %id)
TI_149294215   .a 1628 to 2344 798 to 82   AAA   717/717
(100 %)
3 diff
(99.6 %id)
DN831434 pooled .a 1634 to 2190 557 to 1     Submitted on the opposite strand 557/557
(100 %)
2 diff
(99.7 %id)
TI_149304009   .a 1641 to 2347 798 to 93   AAA   706/706
(100 %)
1 diff
(99.9 %id)
BQ053084 blood, natural killer cells, cell line .a 1667 to 2217 1 to 559       559/926
(60 %)
17 diff
(98.2 %id)
BG214988   .a 1668 to 2334 681 to 10     Submitted on the opposite strand 672/683
(98 %)
11 diff
(98.4 %id)
BG212317   .a 1670 to 2334 673 to 13     Submitted on the opposite strand 661/676
(97 %)
9 diff
(98.7 %id)
BG217125   .a 1670 to 2332 674 to 14     Submitted on the opposite strand 661/679
(97 %)
6 diff
(99.2 %id)
BG220163   .a 1670 to 2334 678 to 13     Submitted on the opposite strand 666/681
(97 %)
7 diff
(99.0 %id)
TI_149283680   .a 1672 to 2344 778 to 108   AAA   671/1154
(58 %)
9 diff
(99.3 %id)
BU683013 lung .a 1672 to 2344 691 to 19   AAA   673/696
(96 %)
3 diff
(99.6 %id)
BM981824 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1672 to 2347 693 to 19   AAA   675/685
(98 %)
1 diff
(99.9 %id)
BU625882 cell lines, Enchondroma .a 1672 to 2344 690 to 19   AAA   672/691
(97 %)
1 diff
(99.9 %id)
BG183243   .a 1673 to 1955 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
BG198771   .a 1673 to 2333 670 to 12     Submitted on the opposite strand 659/741
(88 %)
21 diff
(97.2 %id)
BG209210   .a 1673 to 2330 1 to 658       658/664
(99 %)
3 diff
(99.6 %id)
BG211786   .a 1673 to 2332 1 to 658       658/661
(99 %)
8 diff
(98.8 %id)
BG212840   .a 1673 to 2330 1 to 657       657/662
(99 %)
8 diff
(98.8 %id)
BX329501 Neuroblastoma Cot 25-normalized .a 1673 to 2337 669 to 4       666/669
(99 %)
19 diff
(97.2 %id)
BX392293 Neuroblastoma Cot 25-normalized .a 1673 to 2312 640 to 1       640/640
(100 %)
28 diff
(95.7 %id)
AI288739 carcinoid, lung .a 1673 to 2344 673 to 1       673/673
(100 %)
1 diff
(99.9 %id)
AI458136 pooled .a 1673 to 2344 689 to 17   AAA   673/682
(98 %)
8 diff
(98.9 %id)
AI742149 pooled .a 1673 to 2344 688 to 19   AAA   670/670
(100 %)
17 diff
(97.5 %id)
TI_149300978   .a 1673 to 2344 751 to 79   AAA   673/940
(71 %)
6 diff
(99.4 %id)
BX352426   .a 1675 to 2343 667 to 1       667/671
(99 %)
13 diff
(98.1 %id)
CB306786 Human Lung Epithelial cells, lung .a 1675 to 2366 710 to 19   AAA   692/709
(97 %)
0 diff
(100 %id)
BE934570 head_neck .a 1676 to 2115 11 to 449       439/451
(97 %)
2 diff
(99.6 %id)
BE934574 head_neck .a 1676 to 2115 19 to 459       441/461
(95 %)
2 diff
(99.6 %id)
BF357292 head_neck .a 1676 to 2115 13 to 453       442/455
(97 %)
2 diff
(99.6 %id)
DN831433 pooled .a 1676 to 2223 10 to 557       548/557
(98 %)
0 diff
(100 %id)
BX374134   .a 1681 to 2337 659 to 4       656/667
(98 %)
1 diff
(99.9 %id)
AA868537   .a 1681 to 2345 664 to 3       662/664
(99 %)
4 diff
(99.4 %id)
BE934566 head_neck .a 1682 to 2115 1 to 433       433/435
(99 %)
3 diff
(99.4 %id)
DW439706 Liver .a 1686 to 1910 17 to 241       225/241
(93 %)
1 diff
(99.6 %id)
AA706317 parathyroid gland, parathyroid tumor .a 1687 to 2345 666 to 8       659/666
(98 %)
12 diff
(98.2 %id)
TI_149299963   .a 1694 to 2354 754 to 94   AAA   661/662
(99 %)
0 diff
(100 %id)
BM976133 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1714 to 2354 659 to 19   AAA   641/641
(100 %)
0 diff
(100 %id)
AW189252 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1720 to 2344 635 to 11   AAA   625/625
(100 %)
22 diff
(96.5 %id)
BU782671 insulinoma, Pancreas .a 1729 to 2344 633 to 18   AAA   616/616
(100 %)
0 diff
(100 %id)
AI288730 carcinoid, lung .a 1748 to 2345 599 to 1       599/599
(100 %)
5 diff
(99.2 %id)
BU680288 lung, Primary Lung Epithelial Cells .a 1757 to 2344 606 to 19   AAA   588/588
(100 %)
1 diff
(99.9 %id)
BU734321 eye, RPE and Choroid .a 1761 to 2344 602 to 19   AAA   584/584
(100 %)
0 diff
(100 %id)
BM314190 Pancreas, Purified pancreatic islet .a 1765 to 2366 604 to 1       604/607
(99 %)
4 diff
(99.4 %id)
BM976950 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1767 to 2344 596 to 19   AAA   578/578
(100 %)
6 diff
(99.0 %id)
AA339788 epithelium, skin .a 1777 to 1993 1 to 217       217/217
(100 %)
1 diff
(99.6 %id)
BM263239 Pancreas, Purified pancreatic islet .a 1783 to 2366 584 to 1       584/584
(100 %)
3 diff
(99.5 %id)
BG232072 blood, lymphocyte .a 1786 to 2161 376 to 1       376/376
(100 %)
8 diff
(97.9 %id)
BF688087 brain, glioblastoma .a 1788 to 2331 1 to 548       548/782
(70 %)
13 diff
(98.4 %id)
BG235927 blood, lymphocyte .a 1798 to 2367 575 to 6   tiling clone,   570/575
(99 %)
0 diff
(100 %id)
BX375786 Neuroblastoma Cot 25-normalized .a 1802 to 2346 542 to 1   fully sequenced,   542/542
(100 %)
7 diff
(98.8 %id)
TI_1948090748   .a 1802 to 2165 485 to 121   fully sequenced,   365/485
(75 %)
0 diff
(100 %id)
BF742198 breast .a 1804 to 2053 279 to 32     Submitted on the opposite strand 248/291
(85 %)
0 diff
(100 %id)
BM142680 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 1813 to 2343 531 to 1       531/531
(100 %)
0 diff
(100 %id)
AA570025 breast .a 1822 to 2343 521 to 1       521/521
(100 %)
6 diff
(98.9 %id)
BX329527 Neuroblastoma Cot 25-normalized .a 1832 to 2337 508 to 4       505/640
(78 %)
11 diff
(98.3 %id)
BX351533 Placenta Cot 25-normalized .a 1832 to 2337 507 to 4       504/668
(75 %)
18 diff
(97.4 %id)
N32620 placenta .a 1833 to 2344 509 to 1       509/567
(89 %)
3 diff
(99.5 %id)
CA428826 Cell Line, Chondrosarcoma .a 1833 to 2344 530 to 19   AAA   512/512
(100 %)
4 diff
(99.3 %id)
CD556677 brain, Pituitary .a 1842 to 2344 18 to 520   AAA   503/520
(96 %)
5 diff
(99.1 %id)
AA769126 germinal center B cell .a 1851 to 2344 503 to 11   AAA   493/493
(100 %)
1 diff
(99.8 %id)
BP390034 pancreatic islet .a 1855 to 2352 1 to 499     Submitted on the opposite strand 499/500
(99 %)
2 diff
(99.6 %id)
AA916869 carcinoid, lung .a 1857 to 2343 485 to 1       485/485
(100 %)
2 diff
(99.6 %id)
AI631097 Kidney, renal cell tumor .a 1859 to 2354 495 to 1       495/502
(98 %)
2 diff
(99.7 %id)
BI910884 leukocyte .a 1859 to 2366 1 to 508   AAA   508/508
(100 %)
0 diff
(100 %id)
TI_57235665   .a 1859 to 2366 28 to 535   AAA   508/535
(94 %)
0 diff
(100 %id)
BE858768 brain, glioblastoma (pooled) .a 1862 to 2344 483 to 1       483/483
(100 %)
0 diff
(100 %id)
AA846158 parathyroid gland, parathyroid tumor .a 1863 to 2345 487 to 6       482/487
(98 %)
2 diff
(99.6 %id)
AI961301 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1866 to 2367 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AA778137 heart .a 1867 to 2344 476 to 1       476/476
(100 %)
3 diff
(99.4 %id)
AA679289 liver and spleen .a 1867 to 2345 478 to 1       478/478
(100 %)
4 diff
(99.2 %id)
AA595720 lung, lung tumor .a 1867 to 2339 479 to 8       472/479
(98 %)
0 diff
(100 %id)
AA814185 2 pooled tumors (clear cell type), Kidney .a 1867 to 2367 501 to 3       499/501
(99 %)
4 diff
(99.3 %id)
AA846306 parathyroid gland, parathyroid tumor .a 1867 to 2345 483 to 6       478/483
(98 %)
0 diff
(100 %id)
AA846307 parathyroid gland, parathyroid tumor .a 1867 to 2345 483 to 6       478/483
(98 %)
3 diff
(99.4 %id)
AI015211   .a 1867 to 2301 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AI123387 parathyroid gland, parathyroid tumor .a 1867 to 2355 494 to 6       489/494
(98 %)
0 diff
(100 %id)
AI418976 brain, glioblastoma (pooled) .a 1867 to 2345 484 to 6       479/484
(98 %)
3 diff
(99.4 %id)
AI400450 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1867 to 2367 503 to 3       501/503
(99 %)
1 diff
(99.9 %id)
AI582290 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1867 to 2365 499 to 1       499/499
(100 %)
0 diff
(100 %id)
BE349105 malignant melanoma, metastatic to lymphnode, skin .a 1867 to 2351 507 to 23   AAA   485/485
(100 %)
6 diff
(98.8 %id)
AA854627 parathyroid gland, parathyroid tumor .a 1870 to 2344 490 to 17   AAA   474/474
(100 %)
2 diff
(99.6 %id)
N57748 liver and spleen .a 1876 to 2347 470 to 2       469/473
(99 %)
2 diff
(99.6 %id)
AA861932 parathyroid gland, parathyroid tumor .a 1895 to 2344 464 to 17   AAA   448/448
(100 %)
3 diff
(99.4 %id)
AI570785 adenocarcinoma, Pancreas .a 1911 to 2344 444 to 11   AAA   434/434
(100 %)
0 diff
(100 %id)
DB531648 hippocampus .a 1915 to 2345 1 to 431     Submitted on the opposite strand 431/437
(98 %)
1 diff
(99.8 %id)
AA838822 parathyroid gland, parathyroid tumor .a 1917 to 2344 444 to 18   AAA   427/427
(100 %)
4 diff
(99.1 %id)
N35400 melanocyte .a 1919 to 2344 424 to 1       424/424
(100 %)
4 diff
(99.1 %id)
AA055640 colon, tumor .a 1919 to 2344 441 to 17   AAA   425/426
(99 %)
7 diff
(98.4 %id)
AI818843 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1919 to 2345 431 to 5       427/431
(99 %)
1 diff
(99.8 %id)
AI261470 adenocarcinoma, colon .a 1920 to 2343 425 to 1       425/425
(100 %)
9 diff
(97.9 %id)
AI338312 lung .a 1921 to 2345 432 to 8       425/432
(98 %)
0 diff
(100 %id)
BM674347 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1921 to 2344 443 to 19   AAA   425/434
(97 %)
1 diff
(99.8 %id)
AW083449 colon, moderately differentiated adenocarcinoma .a 1924 to 2344 420 to 1       420/420
(100 %)
9 diff
(97.9 %id)
AA704930 liver and spleen .a 1925 to 2345 421 to 2       420/421
(99 %)
2 diff
(99.6 %id)
AI093978 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1925 to 2345 422 to 5       418/422
(99 %)
0 diff
(100 %id)
DB509584 testis .a 1927 to 2347 1 to 424     Submitted on the opposite strand 422/424
(99 %)
5 diff
(98.9 %id)
BI761563 pooled colon, kidney, stomach .a 1927 to 2344 1 to 418   AAA   418/418
(100 %)
0 diff
(100 %id)
TI_57149129   .a 1927 to 2344 34 to 451   AAA   418/451
(92 %)
0 diff
(100 %id)
T31883 colon, epididymis .a 1937 to 2176 1 to 240       240/240
(100 %)
3 diff
(98.8 %id)
M85985   .a 1940 to 2334 395 to 1       395/434
(91 %)
6 diff
(98.7 %id)
BF435874 pooled .a 1942 to 2161 220 to 1       220/241
(91 %)
9 diff
(96.3 %id)
AA514430 colon .a 1947 to 2345 401 to 3       399/401
(99 %)
0 diff
(100 %id)
AW080892 colon, moderately differentiated adenocarcinoma .a 1947 to 2345 401 to 2       400/422
(94 %)
0 diff
(100 %id)
AA524107 colon .a 1950 to 2366 415 to 1       415/415
(100 %)
7 diff
(98.4 %id)
BI004082 head_normal .a 1953 to 2218 267 to 1       267/267
(100 %)
4 diff
(98.6 %id)
AA768691 germinal center B cell .a 1960 to 2344 407 to 26   AAA   382/382
(100 %)
4 diff
(99.0 %id)
BF345844 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1966 to 2347 1 to 382       382/400
(95 %)
2 diff
(99.5 %id)
BF345763 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1966 to 2353 1 to 400       398/420
(94 %)
28 diff
(93.4 %id)
BF345934 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1966 to 2347 1 to 382   AAA   382/382
(100 %)
0 diff
(100 %id)
F27156 pectoral muscle (after mastectomy) .a 1967 to 2164 1 to 198       198/198
(100 %)
0 diff
(100 %id)
BF346761 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1978 to 2344 1 to 367   AAA   367/367
(100 %)
1 diff
(99.8 %id)
AI261307 Kidney .a 1979 to 2344 362 to 1       362/362
(100 %)
8 diff
(97.8 %id)
AA627447 colon, colon tumor RER+ .a 1989 to 2345 361 to 6       356/361
(98 %)
0 diff
(100 %id)
AA534797 colon .a 1991 to 2366 375 to 1       375/375
(100 %)
7 diff
(98.2 %id)
AA527309 colon .a 1996 to 2344 359 to 12   AAA   348/348
(100 %)
1 diff
(99.8 %id)
BG211785   .a 2007 to 2331 339 to 15     Submitted on the opposite strand 325/339
(95 %)
0 diff
(100 %id)
R96548 liver and spleen .a 2019 to 2345 1 to 327   fully sequenced,   327/327
(100 %)
2 diff
(99.4 %id)
AI014403 Kidney .a 2022 to 2344 321 to 1       321/321
(100 %)
2 diff
(99.4 %id)
BG219687   .a 2042 to 2263 1 to 222       222/222
(100 %)
9 diff
(96.0 %id)
BG214446   .a 2043 to 2336 69 to 369   AAA   301/369
(81 %)
0 diff
(100 %id)
BX438448 neuroblastoma .a 2044 to 2335 293 to 1       293/293
(100 %)
7 diff
(97.7 %id)
AI023224   .a 2044 to 2343 314 to 17   AAA   298/312
(95 %)
2 diff
(99.4 %id)
AI401341 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2044 to 2345 308 to 8       301/312
(96 %)
0 diff
(100 %id)
AA386230 brain, hippocampus .a 2045 to 2334 293 to 1       293/315
(93 %)
12 diff
(96.2 %id)
T07076   .a 2045 to 2328 286 to 1       286/286
(100 %)
2 diff
(99.4 %id)
C00432   .a 2046 to 2338 1 to 293       293/299
(97 %)
1 diff
(99.7 %id)
BG201861   .a 2049 to 2342 11 to 306   AAA   296/306
(96 %)
0 diff
(100 %id)
AA913438 Kidney .a 2050 to 2301 251 to 1       251/256
(98 %)
4 diff
(98.5 %id)
BG197748   .a 2052 to 2354 14 to 320   AAA   307/320
(95 %)
0 diff
(100 %id)
BG208644   .a 2053 to 2366 13 to 325   AAA   313/325
(96 %)
0 diff
(100 %id)
Z38977 brain, total brain .a 2060 to 2344 284 to 1       284/284
(100 %)
1 diff
(99.7 %id)
BG184674   .a 2061 to 2344 24 to 308   AAA   285/308
(92 %)
0 diff
(100 %id)
BG221123   .a 2063 to 2344 1 to 282   AAA   282/282
(100 %)
2 diff
(99.3 %id)
AW952580   .a 2066 to 2344 1 to 279   AAA   279/279
(100 %)
0 diff
(100 %id)
AI057007 liver and spleen .a 2066 to 2344 291 to 13   AAA   279/279
(100 %)
0 diff
(100 %id)
R45818   .a 2071 to 2325 260 to 1       260/264
(98 %)
14 diff
(94.7 %id)
AA335893 epididymis .a 2073 to 2185 1 to 113       113/113
(100 %)
0 diff
(100 %id)
AA832075 germinal center B cell .a 2076 to 2344 277 to 11   AAA   267/267
(100 %)
2 diff
(99.3 %id)
AI814520 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 2080 to 2344 277 to 13   AAA   265/265
(100 %)
3 diff
(98.9 %id)
AA782444 parathyroid gland, parathyroid tumor .a 2105 to 2345 245 to 7       239/245
(97 %)
0 diff
(100 %id)
BG952563 colon .a 2110 to 2345 8 to 244       237/249
(95 %)
10 diff
(96.0 %id)
BM021904 Islets of Langerhans, Pancreas .a 2134 to 2344 1 to 211   AAA   211/211
(100 %)
0 diff
(100 %id)
AA192685 muscle, skeletal muscle .a 2143 to 2345 201 to 1       201/201
(100 %)
6 diff
(97.1 %id)
R96503 liver and spleen .a 2164 to 2341 181 to 1   fully sequenced,   181/181
(100 %)
2 diff
(98.9 %id)
AI572491 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2173 to 2367 197 to 3       195/197
(98 %)
0 diff
(100 %id)
AA723553 parathyroid gland, parathyroid tumor .a 2185 to 2345 165 to 6       160/165
(96 %)
0 diff
(100 %id)
EC445990 Prostate .a 2237 to 2343 106 to 2       105/106
(99 %)
0 diff
(100 %id)
EC519419 Prostate .a 2237 to 2343 106 to 1       106/106
(100 %)
3 diff
(97.2 %id)
EC441573 Prostate .a 2240 to 2337 1 to 95       95/98
(96 %)
5 diff
(94.9 %id)
BP317619 pericardium .b 1 to 582 1 to 584   tiling clone,   584/584
(100 %)
3 diff
(99.5 %id)
AI538571 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 434 to 834 401 to 2   tiling clone,   400/401
(99 %)
1 diff
(99.8 %id)
AF132970   .c 1 to 765 1 to 764 exact tiling clone,   764/765
(99 %)
2 diff
(99.8 %id)
H62691 liver and spleen .c 1 to 361 1 to 361       361/363
(99 %)
4 diff
(98.9 %id)
NM_001164356.1   .c 1 to 784 1 to 784 exact RefSeq, AAA   784/784
(100 %)
0 diff
(100 %id)
CB161681 Liver .c 24 to 662 1 to 639 exact     639/639
(100 %)
0 diff
(100 %id)
CB160206 Liver .c 24 to 565 1 to 542       542/542
(100 %)
0 diff
(100 %id)
CN368007 embryonic stem cells, DMSO-treated H9 cellline .c 28 to 597 1 to 570 V163G     570/570
(100 %)
4 diff
(99.3 %id)
AK225608 renal proximal tubule .c 33 to 784 1 to 752 exact tiling clone, AAA   752/752
(100 %)
0 diff
(100 %id)
AA287866 germinal center B cell .c 34 to 495 1 to 460   fully sequenced,   460/460
(100 %)
2 diff
(99.6 %id)
BP332140 renal proximal tubule .c 34 to 613 1 to 582 V163G T164D     582/583
(99 %)
9 diff
(98.5 %id)
BX115708 parathyroid gland, parathyroid tumor .c 37 to 697 1 to 662 exact     662/662
(100 %)
1 diff
(99.9 %id)
W20145 parathyroid gland, parathyroid tumor .c 37 to 554 1 to 522   fully sequenced,   522/522
(100 %)
8 diff
(98.5 %id)
BM263108 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .c 39 to 631 30 to 622 exact     593/622
(95 %)
10 diff
(98.4 %id)
T66037 lung .c 48 to 361 1 to 318       318/321
(99 %)
12 diff
(96.3 %id)
BM824141 Ascites, stomach .c 48 to 634 1 to 587 exact     587/587
(100 %)
0 diff
(100 %id)
AA354151   .c 53 to 341 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
BP393356 pancreatic islet .c 53 to 552 500 to 1       500/500
(100 %)
0 diff
(100 %id)
T59812 lung .c 53 to 361 1 to 315       315/364
(86 %)
12 diff
(96.8 %id)
W01454 lung .c 53 to 391 1 to 345   fully sequenced,   345/345
(100 %)
3 diff
(99.2 %id)
AA309502   .c 55 to 295 1 to 240       240/240
(100 %)
2 diff
(99.2 %id)
W02629 liver and spleen .c 57 to 561 1 to 510   fully sequenced,   510/510
(100 %)
5 diff
(99.1 %id)
W03124 liver and spleen .c 57 to 391 1 to 339   fully sequenced,   339/339
(100 %)
9 diff
(97.4 %id)
CK818905 Islets of Langerhans, Pancreas .c 57 to 402 1 to 349       349/405
(86 %)
15 diff
(96.3 %id)
BM689011 eye, optic nerve .c 58 to 391 9 to 342   fully sequenced,   334/342
(97 %)
6 diff
(98.3 %id)
BM263523 Pancreas, Purified pancreatic islet .c 63 to 646 1 to 584 exact     584/584
(100 %)
1 diff
(99.9 %id)
BM314497 Pancreas, Purified pancreatic islet .c 63 to 667 1 to 605 exact     605/605
(100 %)
0 diff
(100 %id)
N46782 multiple sclerosis lesions .c 63 to 391 1 to 329   fully sequenced,   329/329
(100 %)
3 diff
(99.1 %id)
BM691895 eye, human retina .c 66 to 495 9 to 438   fully sequenced,   430/438
(98 %)
6 diff
(98.7 %id)
AA669524 lung .c 70 to 506 1 to 436     Submitted on the opposite strand 436/437
(99 %)
4 diff
(99.1 %id)
BM126312 Islets of Langerhans, Pancreas .c 73 to 381 1 to 310       310/311
(99 %)
2 diff
(99.4 %id)
N40926 multiple sclerosis lesions .c 330 to 772 441 to 1   fully sequenced,   441/441
(100 %)
4 diff
(99.1 %id)
N74413 liver and spleen .c 330 to 763 436 to 2   fully sequenced,   435/436
(99 %)
2 diff
(99.6 %id)
N70820 lung .c 330 to 763 442 to 1   fully sequenced,   442/442
(100 %)
19 diff
(95.8 %id)
BM662677 eye, optic nerve .c 340 to 784 464 to 19   fully sequenced, AAA   446/446
(100 %)
4 diff
(99.2 %id)
T65878 lung .c 383 to 760 377 to 1       377/377
(100 %)
14 diff
(96.3 %id)
T59676 lung .c 427 to 762 338 to 1       338/505
(66 %)
5 diff
(99.1 %id)
AA287666 germinal center B cell .c 434 to 762 337 to 11   fully sequenced, AAA   327/327
(100 %)
2 diff
(99.4 %id)
BU728596 eye, human retina .c 434 to 767 352 to 19   fully sequenced, AAA   334/334
(100 %)
0 diff
(100 %id)
N91016 parathyroid gland, parathyroid tumor .c 524 to 762 237 to 1   fully sequenced,   237/237
(100 %)
3 diff
(98.8 %id)
N74361 liver and spleen .c 531 to 764 231 to 1   fully sequenced,   231/231
(100 %)
4 diff
(98.3 %id)
BM127073 Islets of Langerhans, Pancreas .d 1 to 363 1 to 367   tiling clone, fully sequenced,   367/367
(100 %)
8 diff
(97.9 %id)
BM126570 Islets of Langerhans, Pancreas .d 1 to 316 1 to 315   fully sequenced,   315/315
(100 %)
3 diff
(99.1 %id)
BM126033 Islets of Langerhans, Pancreas .d 264 to 829 580 to 15   tiling clone, AAA   566/566
(100 %)
8 diff
(98.6 %id)
BM126253 Islets of Langerhans, Pancreas .d 271 to 829 574 to 15   fully sequenced, AAA   560/560
(100 %)
8 diff
(98.6 %id)
BM126765 Islets of Langerhans, Pancreas .d 333 to 829 511 to 15   tiling clone, fully sequenced, AAA   497/497
(100 %)
1 diff
(99.8 %id)
CK818904 Islets of Langerhans, Pancreas .d 451 to 829 393 to 15   AAA   379/379
(100 %)
9 diff
(97.7 %id)
TI_149288189   .e 1 to 754 848 to 99 L8F P9L G10D R11G P12H ... tiling clone, AAA   750/992
(75 %)
12 diff
(98.8 %id)
BU681271 lung .e 182 to 754 598 to 26   tiling clone, AAA   573/580
(98 %)
1 diff
(99.9 %id)
AW973929   .f-u 1 to 584 583 to 1 exact tiling clone, Submitted on the opposite strand 583/583
(100 %)
6 diff
(99.0 %id)
BE769822 prostate_tumor .f-u 12 to 476 464 to 1 K88R tiling clone,   464/464
(100 %)
5 diff
(99.0 %id)
AA283633 germinal center B cell .f-u 82 to 509 1 to 435 L7D C8V V9C Y10L P12S ...   Submitted on the opposite strand 435/435
(100 %)
14 diff
(96.8 %id)
AA568713 colon, colon tumor RER+ .f-u 146 to 584 439 to 1       439/439
(100 %)
0 diff
(100 %id)
AI671464 Kidney .g-u 1 to 182 195 to 14 exact tiling clone, AAA   182/182
(100 %)
1 diff
(99.5 %id)
BM975205 lung Gene THAP4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DA179972 amygdala Gene THAP4, variant not shown       capped This clone was ignored    
R51284 whole brain Gene THAP4, variant not shown         This clone was ignored    
R51285 whole brain Gene THAP4, variant not shown       AAA This clone was ignored    
AA224057   Gene THAP4, variant not shown         This clone was ignored    
AA224058   Gene THAP4, variant not shown         This clone was ignored    
AA806194 germinal center B cell Gene THAP4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AW410330 muscle, rhabdomyosarcoma Gene THAP4, variant not shown       available from MGC, AAA This clone was ignored    
BC000767 Muscle, rhabdomyosarcoma Gene THAP4, variant not shown       available from MGC, AAA This clone was ignored    
BC001842 Muscle, rhabdomyosarcoma Gene THAP4, variant not shown       available from MGC, AAA This clone was ignored    
BE222615 brain, oligodendroglioma Gene THAP4, variant not shown         Suspected internal deletion, this clone was ignored    
CX782549 human embryonic stem cells Gene THAP4, variant not shown       AAA This clone was ignored    
CX782622 human embryonic stem cells Gene THAP4, variant not shown         This clone was ignored    
TI_149293667   Gene THAP4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_154106519   Gene THAP4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI