cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA304990 | colon | .b | 4489 to 4852 | 1 to 364 | 364/364 (100 %) | 0 diff (100 %id) | |||
AA318935 | adrenal gland | .b | 4087 to 4394 | 1 to 310 | 310/310 (100 %) | 2 diff (99.4 %id) | |||
AA371409 | Prostate | .b | 5047 to 5322 | 1 to 274 | 274/274 (100 %) | 2 diff (99.3 %id) | |||
AF022795 | .a | 91 to 2953 | 25 to 2859 | tiling clone, | 2839/2859 (99 %) | 8 diff (99.8 %id) | |||
AK021697 | whole embryo, mainly head | .b | 1260 to 3305 | 1 to 2016 | available from FLJ, | 2018/2016 (100 %) | 6 diff (99.8 %id) | ||
AK025947 | .b | 4539 to 5999 | 1 to 1461 | available from FLJ, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 1461/1461 (100 %) | 2 diff (99.9 %id) | ||
AK291382 | brain | .b | 362 to 3021 | 11 to 2669 | L805S | tiling clone, | 2659/2669 (99 %) | 9 diff (99.7 %id) | |
AW367384 | head_neck | .b | 3269 to 3776 | 508 to 4 | tiling clone, | 505/508 (99 %) | 0 diff (100 %id) | ||
AW379448 | head_neck | .b | 1052 to 1227 | 181 to 6 | 176/199 (88 %) | 2 diff (99.0 %id) | |||
AW601940 | breast | .b | 5161 to 5535 | 379 to 5 | 375/379 (98 %) | 0 diff (100 %id) | |||
AW850414 | colon | .c-u | 4 to 440 | 1 to 437 | tiling clone, | 437/437 (100 %) | 0 diff (100 %id) | ||
AW957398 | .b | 5085 to 5563 | 1 to 482 | 482/483 (99 %) | 27 diff (94.5 %id) | ||||
AW973855 | .b | 3202 to 3304 | 103 to 1 | Submitted on the opposite strand | 388/388 (100 %) | 10 diff (97.5 %id) | |||
BC020548 | Lymph, lymphoma | .a | 44 to 2989 | 1 to 2946 | tiling clone, available from MGC, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 2946/2946 (100 %) | 3 diff (99.9 %id) | |
BE143777 | head_neck | .c-u | 4 to 563 | 7 to 566 | tiling clone, | 560/566 (98 %) | 12 diff (97.9 %id) | ||
BE143822 | head_neck | .c-u | 1 to 469 | 1 to 468 | tiling clone, | 468/468 (100 %) | 8 diff (98.3 %id) | ||
BF155977 | head_neck | .b | 3225 to 3683 | 8 to 463 | tiling clone, | 456/463 (98 %) | 6 diff (98.8 %id) | ||
BF366664 | nervous_tumor | .b | 1328 to 1442 | 115 to 1 | 115/115 (100 %) | 3 diff (97.4 %id) | |||
BF373303 | prostate_tumor | .b | 2637 to 2854 | 1 to 219 | 219/219 (100 %) | 3 diff (98.7 %id) | |||
BF742848 | breast | .b | 4358 to 4736 | 1 to 378 | 378/378 (100 %) | 2 diff (99.5 %id) | |||
BF923155 | nervous_tumor | .b | 1820 to 2231 | 419 to 14 | Submitted on the opposite strand | 406/419 (96 %) | 3 diff (99.3 %id) | ||
BF932715 | nervous_tumor | .b | 2110 to 2466 | 365 to 9 | Submitted on the opposite strand | 357/365 (97 %) | 0 diff (100 %id) | ||
BG005720 | placenta_normal | .b | 712 to 1005 | 307 to 14 | 294/309 (95 %) | 0 diff (100 %id) | |||
BI715193 | Pancreas, Purified pancreatic islet | .b | 1679 to 2299 | 16 to 636 | 621/636 (97 %) | 6 diff (99.1 %id) | |||
BI792396 | Pancreas, Purified pancreatic islet | .b | 2699 to 3304 | 580 to 1 | 580/580 (100 %) | 12 diff (98.0 %id) | |||
AV755269 | bone marrow | .b | 4274 to 4673 | 72 to 471 | 400/733 (54 %) | 2 diff (99.8 %id) | |||
DA204670 | brain | .b | 4300 to 4880 | 2 to 582 | capped | 581/581 (100 %) | 0 diff (100 %id) | ||
DA242317 | brain | .b | 1977 to 2559 | 2 to 584 | capped | 583/583 (100 %) | 1 diff (99.9 %id) | ||
DA256245 | caudate nucleus | .b | 1506 to 2056 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
DA304749 | hippocampus | .c-u | 450 to 1030 | 2 to 583 | tiling clone, capped | 582/582 (100 %) | 2 diff (99.7 %id) | ||
DA310160 | hippocampus | .b | 844 to 1431 | 2 to 589 | capped | 588/588 (100 %) | 0 diff (100 %id) | ||
BX099060 | liver and spleen | .b | 3758 to 4469 | 1 to 714 | 714/714 (100 %) | 4 diff (99.5 %id) | |||
BX115619 | breast | .b | 2334 to 3073 | 1 to 740 | 740/740 (100 %) | 0 diff (100 %id) | |||
C02496 | .b | 5498 to 5817 | 1 to 320 | 320/322 (99 %) | 1 diff (99.7 %id) | ||||
CN283066 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 3921 to 4469 | 17 to 564 | 548/564 (97 %) | 6 diff (99.0 %id) | |||
CN387714 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 2045 to 2673 | 21 to 649 | 629/649 (96 %) | 6 diff (99.1 %id) | |||
CN387715 | embryonic stem cells, DMSO-treated H9 cellline | .b | 1708 to 2198 | 1 to 491 | 491/491 (100 %) | 5 diff (99.0 %id) | |||
CN387716 | embryonic stem cells, DMSO-treated H9 cellline | .b | 2855 to 3346 | 1 to 492 | 492/494 (99 %) | 5 diff (99.0 %id) | |||
AL535848 | brain, fetal brain | .a | 91 to 921 | 1 to 831 | 831/831 (100 %) | 6 diff (99.3 %id) | |||
BX451450 | brain, fetal brain | .b | 1117 to 1942 | 11 to 836 | 826/876 (94 %) | 16 diff (98.2 %id) | |||
BX451451 | brain, fetal brain | .b | 1112 to 2019 | 3 to 906 | 904/906 (99 %) | 11 diff (98.8 %id) | |||
BX419237 | brain, fetal brain | .c-u | 1391 to 1666 | 432 to 707 | tiling clone, | 707/975 (72 %) | 16 diff (98.4 %id) | ||
BX455072 | brain, fetal brain | .c-u | 2102 to 2859 | 757 to 1 | tiling clone, | 757/903 (83 %) | 17 diff (98.2 %id) | ||
CA394377 | eye, RPE/choroid | .b | 4634 to 5266 | 1 to 633 | tiling clone, | 633/633 (100 %) | 1 diff (99.9 %id) | ||
CU457197 | epidermis | .b | 1547 to 2097 | 561 to 11 | Submitted on the opposite strand | 551/561 (98 %) | 2 diff (99.7 %id) | ||
CV023960 | mixed | .b | 425 to 974 | 1 to 553 | 553/553 (100 %) | 13 diff (97.7 %id) | |||
AL134300 | brain | .b | 892 to 1222 | 1 to 331 | 331/331 (100 %) | 0 diff (100 %id) | |||
BX477645 | .b | 4150 to 4665 | 1 to 516 | 516/516 (100 %) | 0 diff (100 %id) | ||||
AL702943 | human skeletal muscle | .b | 2955 to 3352 | 1 to 399 | 399/399 (100 %) | 1 diff (99.8 %id) | |||
AL711746 | human skeletal muscle | .b | 1466 to 2083 | 1 to 617 | 617/617 (100 %) | 8 diff (98.8 %id) | |||
AL121441 | melanoma (MeWo cell line) | .b | 2393 to 2636 | 1 to 244 | 244/244 (100 %) | 5 diff (98.0 %id) | |||
AL135022 | melanoma (MeWo cell line) | .b | 4349 to 4665 | 1 to 317 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 317/317 (100 %) | 0 diff (100 %id) | |
DW411747 | Liver | .b | 3202 to 3318 | 166 to 282 | 269/327 (82 %) | 8 diff (97.6 %id) | |||
DW449122 | Liver | .b | 3022 to 3199 | 21 to 198 | 178/202 (88 %) | 4 diff (98.1 %id) | |||
EC529108 | Prostate | .b | 2806 to 2911 | 1 to 106 | 106/106 (100 %) | 5 diff (95.3 %id) | |||
EL951640 | eyeball | .b | 5062 to 5581 | 1 to 520 | 520/520 (100 %) | 8 diff (98.5 %id) | |||
DA536876 | heart | .b | 3893 to 4450 | 2 to 559 | capped | 558/558 (100 %) | 1 diff (99.9 %id) | ||
DA539670 | Kidney | .b | 3883 to 4470 | 2 to 590 | capped | 589/589 (100 %) | 1 diff (99.9 %id) | ||
FN083596 | breast carcinoma | .b | 5582 to 5644 | 1 to 62 | 62/63 (98 %) | 2 diff (96.9 %id) | |||
GD143779 | .b | 4589 to 4671 | 1 to 83 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 83/83 (100 %) | 4 diff (95.2 %id) | ||
GD148288 | .b | 5784 to 5930 | 1 to 147 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 147/147 (100 %) | 6 diff (96.0 %id) | ||
BQ640068 | eye, retina | .b | 2264 to 2873 | 1 to 610 | 610/610 (100 %) | 1 diff (99.9 %id) | |||
AU118757 | whole embryo, mainly head | .b | 1261 to 2125 | 2 to 866 | capped | 865/865 (100 %) | 9 diff (99.0 %id) | ||
AU145246 | whole embryo, mainly head | .b | 2704 to 3305 | 570 to 1 | 570/570 (100 %) | 17 diff (97.1 %id) | |||
T47324 | placenta | .b | 4872 to 5180 | 1 to 312 | 312/314 (99 %) | 5 diff (98.5 %id) | |||
T47325 | placenta | .b | 5611 to 5933 | 325 to 1 | 325/325 (100 %) | 4 diff (98.8 %id) | |||
H22171 | breast | .b | 3202 to 3270 | 69 to 1 | 361/362 (99 %) | 11 diff (97.0 %id) | |||
H78571 | liver and spleen | .b | 4326 to 4676 | 356 to 3 | 354/356 (99 %) | 0 diff (100 %id) | |||
H78621 | liver and spleen | .b | 3759 to 4176 | 1 to 424 | 424/425 (99 %) | 11 diff (97.5 %id) | |||
H52225 | ovarian tumor, ovary | .b | 4185 to 4670 | 500 to 10 | 491/503 (97 %) | 0 diff (100 %id) | |||
H52316 | ovarian tumor, ovary | .b | 3918 to 4089 | 1 to 172 | 172/172 (100 %) | 1 diff (99.5 %id) | |||
AA701586 | liver and spleen | .b | 2817 to 3305 | 461 to 1 | 461/461 (100 %) | 0 diff (100 %id) | |||
AA777843 | liver and spleen | .b | 3202 to 3304 | 103 to 1 | 390/390 (100 %) | 0 diff (100 %id) | |||
AA485398 | lung | .b | 4703 to 4866 | 164 to 1 | 164/164 (100 %) | 0 diff (100 %id) | |||
AA516382 | colon | .b | 3202 to 3307 | 106 to 1 | 281/281 (100 %) | 0 diff (100 %id) | |||
AA568227 | colon, colon tumor RER+ | .b | 3202 to 3304 | 103 to 1 | 431/431 (100 %) | 2 diff (99.6 %id) | |||
AA728793 | alveolar rhabdomyosarcoma | .b | 3202 to 3312 | 111 to 1 | 366/366 (100 %) | 0 diff (100 %id) | |||
AA810898 | germinal center B cell | .b | 3202 to 3315 | 114 to 1 | 442/442 (100 %) | 0 diff (100 %id) | |||
AA829477 | germinal center B cell | .b | 3202 to 3315 | 114 to 1 | 444/444 (100 %) | 0 diff (100 %id) | |||
AI140559 | liver and spleen | .b | 3202 to 3306 | 105 to 1 | 185/185 (100 %) | 0 diff (100 %id) | |||
AI033139 | liver and spleen | .b | 3202 to 3305 | 104 to 1 | 420/420 (100 %) | 0 diff (100 %id) | |||
AI086249 | liver and spleen | .b | 3225 to 3305 | 81 to 1 | 81/81 (100 %) | 0 diff (100 %id) | |||
AI034065 | liver and spleen | .b | 4246 to 4675 | 430 to 1 | 430/430 (100 %) | 0 diff (100 %id) | |||
AI076679 | liver and spleen | .b | 3202 to 3308 | 107 to 1 | 298/298 (100 %) | 13 diff (95.7 %id) | |||
AI092512 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4129 to 4672 | 544 to 1 | 544/544 (100 %) | 1 diff (99.9 %id) | |||
AI092827 | heart | .b | 4227 to 4664 | 438 to 1 | 438/438 (100 %) | 3 diff (99.4 %id) | |||
AI090122 | uterus | .b | 4228 to 4672 | 445 to 1 | 445/445 (100 %) | 0 diff (100 %id) | |||
AI199831 | placenta | .c-u | 607 to 993 | 387 to 1 | 387/387 (100 %) | 1 diff (99.8 %id) | |||
AI222340 | pooled | .b | 4356 to 4665 | 313 to 4 | 310/313 (99 %) | 0 diff (100 %id) | |||
AI264042 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4234 to 4675 | 442 to 1 | 442/442 (100 %) | 1 diff (99.8 %id) | |||
AI224487 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4106 to 4675 | 564 to 1 | 564/602 (93 %) | 17 diff (97.2 %id) | |||
AI290870 | carcinoid, lung | .b | 4228 to 4785 | 562 to 5 | 558/562 (99 %) | 0 diff (100 %id) | |||
AI304844 | carcinoid, lung | .b | 2661 to 3315 | 627 to 1 | 627/627 (100 %) | 7 diff (98.9 %id) | |||
AI347965 | adenocarcinoma, colon | .b | 2797 to 3305 | 481 to 1 | 481/481 (100 %) | 0 diff (100 %id) | |||
AI334206 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4486 to 4869 | 386 to 3 | 384/386 (99 %) | 0 diff (100 %id) | |||
AI393060 | B-cell, chronic lymphotic leukemia | .b | 4311 to 4672 | 399 to 37 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 363/363 (100 %) | 3 diff (99.2 %id) | |
AI435349 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 5451 to 5975 | 525 to 1 | 525/525 (100 %) | 0 diff (100 %id) | |||
AI472815 | pooled | .b | 4383 to 4676 | 294 to 2 | 293/294 (99 %) | 0 diff (100 %id) | |||
AI458478 | carcinoid, lung | .b | 4245 to 4664 | 420 to 1 | 420/420 (100 %) | 0 diff (100 %id) | |||
AI458508 | carcinoid, lung | .b | 4305 to 4664 | 360 to 1 | 360/360 (100 %) | 0 diff (100 %id) | |||
AI457845 | carcinoid, lung | .b | 4227 to 4664 | 438 to 1 | 438/438 (100 %) | 0 diff (100 %id) | |||
AI570678 | anaplastic oligodendroglioma, brain | .b | 3202 to 3304 | 103 to 1 | 340/340 (100 %) | 1 diff (99.8 %id) | |||
AI640471 | Kidney | .b | 5642 to 5975 | 354 to 21 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 334/335 (99 %) | 0 diff (100 %id) | |
AI915334 | pooled | .b | 4248 to 4676 | 430 to 1 | 430/434 (99 %) | 3 diff (99.4 %id) | |||
AI695108 | colon | .b | 3967 to 4499 | 1 to 531 | Submitted on the opposite strand | 531/531 (100 %) | 37 diff (93.1 %id) | ||
AI806639 | pooled | .b | 330 to 905 | 1 to 575 | Submitted on the opposite strand | 575/580 (99 %) | 19 diff (96.8 %id) | ||
AI932616 | adenocarcinoma, Pancreas | .b | 5510 to 5841 | 321 to 1 | 321/321 (100 %) | 10 diff (96.9 %id) | |||
AI936303 | normal prostate, Prostate | .b | 4218 to 4679 | 477 to 16 | 462/477 (96 %) | 0 diff (100 %id) | |||
AI955083 | pooled germ cell tumors | .b | 4421 to 4668 | 263 to 16 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 248/248 (100 %) | 1 diff (99.6 %id) | |
AW000731 | Prostate | .b | 4449 to 4679 | 246 to 16 | 231/246 (93 %) | 0 diff (100 %id) | |||
AI978832 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .b | 5460 to 5841 | 382 to 1 | 382/382 (100 %) | 0 diff (100 %id) | |||
AI985503 | Kidney | .b | 5575 to 5933 | 360 to 2 | 359/360 (99 %) | 0 diff (100 %id) | |||
AW057971 | thymus, pooled | .b | 3965 to 4394 | 1 to 430 | Submitted on the opposite strand | 430/430 (100 %) | 3 diff (99.4 %id) | ||
AW071097 | thymus, pooled | .b | 4201 to 4676 | 478 to 3 | 476/478 (99 %) | 0 diff (100 %id) | |||
AW074418 | colon, juvenile granulosa tumor | .b | 3202 to 3305 | 104 to 1 | 299/299 (100 %) | 4 diff (98.7 %id) | |||
AW087615 | pooled | .b | 427 to 645 | 1 to 219 | Submitted on the opposite strand | 219/220 (99 %) | 7 diff (96.9 %id) | ||
AW194020 | serous papillary carcinoma, high grade, 2pooled tumors, uterus | .b | 3202 to 3305 | 104 to 1 | 447/447 (100 %) | 0 diff (100 %id) | |||
AW237600 | Kidney | .b | 5587 to 6030 | 443 to 2 | tiling clone, | 442/443 (99 %) | 0 diff (100 %id) | ||
AW207872 | .b | 4209 to 4661 | 471 to 20 | 452/471 (95 %) | 0 diff (100 %id) | ||||
AW270978 | Kidney | .b | 4231 to 4672 | 457 to 16 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 442/442 (100 %) | 2 diff (99.6 %id) | |
AW613926 | pooled germ cell tumors | .b | 4325 to 4679 | 356 to 2 | 355/356 (99 %) | 0 diff (100 %id) | |||
AW613940 | pooled germ cell tumors | .b | 4345 to 4679 | 337 to 2 | 336/337 (99 %) | 0 diff (100 %id) | |||
AW772699 | normal epithelium, thyroid | .b | 5631 to 5842 | 12 to 223 | Submitted on the opposite strand | 212/223 (95 %) | 6 diff (97.4 %id) | ||
BU430479 | lymph | .b | 359 to 873 | 1 to 515 | 515/515 (100 %) | 9 diff (98.3 %id) | |||
BF516373 | .b | 5387 to 5815 | 11 to 439 | Submitted on the opposite strand | 429/449 (95 %) | 3 diff (99.4 %id) | |||
CF142918 | lymph | .b | 3669 to 4047 | 8 to 386 | 379/386 (98 %) | 6 diff (98.5 %id) | |||
CF143723 | lymph | .b | 3669 to 4075 | 8 to 414 | 407/414 (98 %) | 6 diff (98.6 %id) | |||
BE672664 | carcinoid, lung | .b | 5225 to 5758 | 1 to 534 | Submitted on the opposite strand | 534/534 (100 %) | 1 diff (99.9 %id) | ||
BF002079 | colon, colon tumor, RER+ | .b | 4367 to 4866 | 501 to 1 | 501/501 (100 %) | 2 diff (99.7 %id) | |||
BE999954 | colon, colon tumor, RER+ | .b | 5503 to 5933 | 431 to 1 | 431/431 (100 %) | 2 diff (99.6 %id) | |||
BC010093 | Eye, retinoblastoma | .b | 354 to 2236 | 10 to 1892 | tiling clone, AAA | 1883/2321 (81 %) | 1 diff (100.0 %id) | ||
BC011136 | Placenta, choriocarcinoma | .b | 4261 to 4677 | 1 to 417 | available from MGC, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 417/417 (100 %) | 0 diff (100 %id) | |
BE538232 | cervix | .b | 4281 to 4677 | 1 to 395 | available from MGC, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 395/395 (100 %) | 2 diff (99.5 %id) | |
BF197588 | Kidney | .b | 5776 to 5933 | 167 to 10 | 158/167 (94 %) | 0 diff (100 %id) | |||
BE867160 | adenocarcinoma, colon | .b | 3619 to 4334 | 1 to 708 | 708/713 (99 %) | 17 diff (97.7 %id) | |||
BE787126 | large cell carcinoma, lung | .b | 3426 to 4075 | 1 to 649 | 649/649 (100 %) | 4 diff (99.4 %id) | |||
BE620966 | epithelioid carcinoma, Pancreas | .b | 3883 to 4228 | 1 to 347 | 347/348 (99 %) | 4 diff (98.9 %id) | |||
BE889417 | leiomyosarcoma, uterus | .b | 2110 to 2823 | 1 to 715 | 715/807 (88 %) | 19 diff (97.7 %id) | |||
BE894890 | melanotic melanoma, skin | .b | 4585 to 5208 | 1 to 624 | 624/629 (99 %) | 3 diff (99.6 %id) | |||
BG030587 | breast, mammary adenocarcinoma, cell line | .b | 4458 to 5236 | 1 to 775 | 775/969 (79 %) | 20 diff (98.0 %id) | |||
BG032686 | breast, mammary adenocarcinoma, cell line | .b | 2075 to 2820 | 1 to 736 | 736/745 (98 %) | 12 diff (98.4 %id) | |||
BG030857 | breast, mammary adenocarcinoma, cell line | .b | 2281 to 3061 | 1 to 777 | 777/1076 (72 %) | 15 diff (98.7 %id) | |||
BG115663 | duodenal adenocarcinoma, cell line, small intestine | .b | 2059 to 2779 | 1 to 718 | 718/1044 (68 %) | 28 diff (97.4 %id) | |||
BG177189 | lymph, lymphoma, cell line | .a | 36 to 795 | 5 to 776 | 772/1060 (72 %) | 30 diff (97.2 %id) | |||
BG169791 | hypernephroma, cell line, Kidney | .b | 1973 to 2776 | 1 to 790 | 790/795 (99 %) | 44 diff (94.5 %id) | |||
BC019841 | Bladder, transitional cell papilloma | .b | 4157 to 5999 | 1 to 1843 | tiling clone, available from MGC, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 1843/1843 (100 %) | 1 diff (100.0 %id) | |
BG289480 | bladder, transitional cell papilloma, cell line | .b | 4158 to 4928 | 1 to 767 | available from MGC, | 767/961 (79 %) | 34 diff (96.5 %id) | ||
BG385667 | adenocarcinoma cell line, colon | .b | 1903 to 2631 | 1 to 716 | 716/931 (76 %) | 23 diff (97.6 %id) | |||
BG828430 | muscle, rhabdomyosarcoma | .b | 1072 to 1729 | 1 to 654 | 654/654 (100 %) | 11 diff (98.4 %id) | |||
BI223766 | cervical carcinoma cell line, cervix | .b | 1380 to 1986 | 1 to 610 | 610/610 (100 %) | 9 diff (98.6 %id) | |||
BI756445 | brain | .b | 347 to 1090 | 1 to 744 | 744/744 (100 %) | 3 diff (99.6 %id) | |||
BI857196 | breast, mammary adenocarcinoma, cell line | .b | 5265 to 5933 | 1 to 666 | 666/701 (95 %) | 8 diff (98.9 %id) | |||
BI857114 | breast, mammary adenocarcinoma, cell line | .b | 5265 to 5933 | 1 to 668 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 668/668 (100 %) | 1 diff (99.9 %id) | |
BI861119 | breast, mammary adenocarcinoma, cell line | .b | 3645 to 4481 | 1 to 829 | 829/834 (99 %) | 14 diff (98.4 %id) | |||
BI871623 | adenocarcinoma, cell line, Liver | .b | 3786 to 4526 | 1 to 741 | 741/741 (100 %) | 5 diff (99.4 %id) | |||
BM013421 | brain, neuroblastoma, cell line | .b | 3636 to 4527 | 1 to 894 | 894/894 (100 %) | 19 diff (97.9 %id) | |||
BM457015 | embryonal carcinoma, cell line, testis | .b | 3459 to 4333 | 1 to 892 | tiling clone, | 892/1034 (86 %) | 21 diff (98.0 %id) | ||
BM457417 | embryonal carcinoma, cell line, testis | .b | 1314 to 2234 | 1 to 932 | 932/1083 (86 %) | 16 diff (98.6 %id) | |||
BM545841 | ovary (pool of 3) | .a | 1 to 685 | 117 to 806 | 690/1132 (60 %) | 25 diff (97.8 %id) | |||
BM141729 | Islets of Langerhans, Pancreas | .b | 2750 to 3304 | 555 to 1 | fully sequenced, | 555/555 (100 %) | 0 diff (100 %id) | ||
BM142000 | Islets of Langerhans, Pancreas | .b | 2237 to 2780 | 1 to 544 | fully sequenced, | 544/544 (100 %) | 0 diff (100 %id) | ||
BQ269991 | Pancreas, Purified pancreatic islet | .b | 5257 to 5624 | 1 to 368 | fully sequenced, | 368/368 (100 %) | 4 diff (99.0 %id) | ||
BQ286648 | Pancreas, Purified pancreatic islet | .b | 5594 to 5976 | 383 to 1 | fully sequenced, | 383/383 (100 %) | 2 diff (99.5 %id) | ||
BQ021386 | lung, Metastatic Chondrosarcoma | .b | 4019 to 4663 | 658 to 15 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 644/644 (100 %) | 1 diff (99.9 %id) | |
BQ013999 | Chondrosarcoma, Left Pubic Bone | .b | 2592 to 3305 | 704 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 686/686 (100 %) | 3 diff (99.6 %id) | |
BM991047 | lung, Lung Focal Fibrosis | .b | 5207 to 5818 | 1 to 612 | Submitted on the opposite strand | 612/612 (100 %) | 16 diff (97.4 %id) | ||
BQ001673 | lung, Metastatic Chondrosarcoma | .b | 4012 to 4663 | 666 to 15 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 652/652 (100 %) | 0 diff (100 %id) | |
BQ053895 | blood, natural killer cells, cell line | .b | 2236 to 3089 | 1 to 861 | 861/1068 (80 %) | 13 diff (98.8 %id) | |||
BQ777312 | Pancreas, Purified pancreatic islet | .b | 1683 to 2305 | 1 to 623 | 623/623 (100 %) | 1 diff (99.9 %id) | |||
BQ788001 | Pancreas, Purified pancreatic islet | .b | 2677 to 3304 | 600 to 1 | 600/600 (100 %) | 1 diff (99.9 %id) | |||
BQ777344 | Pancreas, Purified pancreatic islet | .b | 1430 to 1901 | 11 to 482 | 472/482 (97 %) | 6 diff (98.8 %id) | |||
BQ788029 | Pancreas, Purified pancreatic islet | .b | 2651 to 3304 | 626 to 1 | 626/626 (100 %) | 0 diff (100 %id) | |||
BU153976 | eye, retinoblastoma | .b | 4453 to 5251 | 1 to 808 | 808/824 (98 %) | 14 diff (98.4 %id) | |||
BU176010 | eye, retinoblastoma | .b | 2166 to 3019 | 1 to 867 | 865/891 (97 %) | 13 diff (98.6 %id) | |||
BQ424023 | eye, retinoblastoma | .b | 3202 to 3305 | 129 to 232 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 232/232 (100 %) | 0 diff (100 %id) | |
BU182695 | melanotic melanoma, skin | .b | 3202 to 3305 | 257 to 359 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 359/359 (100 %) | 1 diff (99.8 %id) | |
BQ672362 | epidermoid carcinoma, cell line, salivary gland | .b | 4822 to 5718 | 1 to 898 | 898/900 (99 %) | 10 diff (98.9 %id) | |||
BQ936067 | large cell carcinoma, lung | .b | 93 to 645 | 100 to 660 | 561/1105 (50 %) | 29 diff (97.4 %id) | |||
BQ941746 | large cell carcinoma, lung | .b | 1 to 896 | 22 to 920 | tiling clone, | 899/961 (93 %) | 29 diff (97.0 %id) | ||
BU933042 | mixed (pool of 40 RNAs) | .b | 5254 to 6029 | 1 to 775 | 775/783 (98 %) | 16 diff (98.0 %id) | |||
BU941276 | mixed (pool of 40 RNAs) | .b | 4722 to 5368 | 1 to 656 | 656/933 (70 %) | 40 diff (95.8 %id) | |||
CX788961 | human embryonic stem cells | .b | 3960 to 4675 | 9 to 722 | tiling clone, | 714/722 (98 %) | 6 diff (99.2 %id) | ||
CX752573 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .b | 2749 to 3354 | 1 to 606 | tiling clone, | Submitted on the opposite strand | 606/606 (100 %) | 0 diff (100 %id) | |
DR760184 | embryonic stem | .b | 3202 to 3355 | 45 to 198 | 198/198 (100 %) | 0 diff (100 %id) | |||
CB961685 | placenta, pre-eclamptic placenta | .a | 2 to 714 | 28 to 744 | tiling clone, | 717/803 (89 %) | 14 diff (98.3 %id) | ||
CD245374 | White Matter | .b | 1473 to 2372 | 26 to 936 | 888/937 (94 %) | 25 diff (97.4 %id) | |||
CD514546 | White Matter | .b | 4450 to 5224 | 11 to 790 | 780/902 (86 %) | 6 diff (99.4 %id) | |||
CF144162 | lymph | .b | 3669 to 3993 | 8 to 332 | 325/332 (97 %) | 6 diff (98.2 %id) | |||
CF596029 | Stomach, adenocarcinoma | .b | 4413 to 4954 | 1 to 549 | 549/737 (74 %) | 15 diff (98.0 %id) | |||
DA618766 | .b | 663 to 1167 | 2 to 506 | capped | 505/505 (100 %) | 1 diff (99.9 %id) | |||
TI_57220292 | .b | 347 to 1090 | 32 to 775 | 744/775 (96 %) | 9 diff (98.9 %id) | ||||
TI_57186768 | .b | 5265 to 5933 | 54 to 721 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 668/668 (100 %) | 1 diff (99.9 %id) | ||
TI_57186860 | .b | 5265 to 5933 | 56 to 721 | 666/948 (70 %) | 8 diff (99.2 %id) | ||||
TI_57192881 | .b | 3645 to 4481 | 55 to 883 | 829/834 (99 %) | 14 diff (98.4 %id) | ||||
TI_57230762 | .b | 3786 to 4526 | 56 to 796 | 741/741 (100 %) | 5 diff (99.4 %id) | ||||
TI_59380241 | .b | 3637 to 4527 | 96 to 988 | 893/893 (100 %) | 18 diff (98.0 %id) | ||||
CB114590 | Liver | .b | 3202 to 3356 | 24 to 175 | 175/175 (100 %) | 1 diff (99.5 %id) | |||
NM_004257.4 | .a | 25 to 2989 | 1 to 2965 | RefSeq, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 2965/2965 (100 %) | 0 diff (100 %id) | ||
NM_001142621.1 | .b | 344 to 3305 | 1 to 2962 | RefSeq, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 2962/2962 (100 %) | 0 diff (100 %id) | ||
DA804975 | brain | .b | 2176 to 2679 | 2 to 509 | capped | 508/508 (100 %) | 4 diff (99.3 %id) | ||
DA810614 | brain | .b | 2159 to 2703 | 2 to 546 | capped | 545/545 (100 %) | 0 diff (100 %id) | ||
BP328460 | rectum | .b | 1917 to 2498 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
CT002669 | T-Lymphocytes | .b | 449 to 1219 | 1 to 772 | 772/773 (99 %) | 6 diff (99.3 %id) | |||
TI_1948081794 | .b | 418 to 1064 | 117 to 761 | 645/1117 (57 %) | 28 diff (97.5 %id) | ||||
TI_1948081796 | .b | 2088 to 3014 | 1045 to 125 | 921/1151 (80 %) | 23 diff (98.1 %id) | ||||
TI_1948082018 | .b | 2250 to 3014 | 846 to 82 | 765/1078 (70 %) | 28 diff (97.5 %id) | ||||
TI_1948082226 | .b | 2709 to 3013 | 424 to 121 | 304/1129 (26 %) | 3 diff (99.8 %id) | ||||
TI_1948082453 | .b | 418 to 1060 | 115 to 760 | 646/1139 (56 %) | 33 diff (97.2 %id) | ||||
TI_1948082454 | .b | 418 to 1190 | 121 to 902 | 782/1375 (56 %) | 26 diff (98.2 %id) | ||||
TI_1948082455 | .b | 2175 to 3014 | 953 to 126 | 828/1101 (75 %) | 16 diff (98.6 %id) | ||||
DA913658 | .b | 2668 to 3135 | 2 to 469 | capped | 468/468 (100 %) | 0 diff (100 %id) | |||
DA946093 | Spleen | .d-u | 1 to 578 | 2 to 579 | exact | tiling clone, capped | 578/578 (100 %) | 3 diff (99.5 %id) | |
T15625 | .b | 5638 to 6030 | 399 to 1 | 399/483 (82 %) | 11 diff (97.8 %id) | ||||
T16844 | .b | 4650 to 4997 | 28 to 374 | 347/374 (92 %) | 3 diff (99.2 %id) | ||||
DA999308 | breast, tumor tissue | .b | 3618 to 4150 | 2 to 536 | capped | 535/535 (100 %) | 4 diff (99.3 %id) | ||
DN993139 | brain, whole brain | .b | 4213 to 4807 | 9 to 603 | 595/603 (98 %) | 6 diff (99.1 %id) | |||
DN995868 | breast cancer, Mammary gland (cancer tissue) | .a | 91 to 677 | 39 to 625 | 587/625 (93 %) | 6 diff (99.1 %id) | |||
DB150781 | thymus | .b | 357 to 899 | 2 to 545 | capped | 544/544 (100 %) | 1 diff (99.9 %id) | ||
DB151659 | thymus | .b | 3202 to 3341 | 277 to 417 | capped | 416/416 (100 %) | 1 diff (99.8 %id) | ||
TI_154022742 | .b | 5071 to 5782 | 84 to 796 | Submitted on the opposite strand | 713/796 (89 %) | 7 diff (99.2 %id) | |||
TI_154037241 | .b | 4008 to 4663 | 746 to 74 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 673/826 (81 %) | 41 diff (95.1 %id) | ||
TI_154115480 | .b | 2396 to 3305 | 953 to 84 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 870/976 (89 %) | 18 diff (98.2 %id) | ||
TI_154151867 | .b | 364 to 1046 | 78 to 757 | 680/680 (100 %) | 22 diff (96.8 %id) | ||||
TI_154174158 | .b | 3669 to 4111 | 86 to 528 | 443/1123 (39 %) | 8 diff (99.3 %id) | ||||
TI_154175310 | .b | 3669 to 4102 | 92 to 528 | 437/1193 (36 %) | 10 diff (99.2 %id) | ||||
TI_159713763 | .b | 2381 to 3305 | 973 to 85 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 889/1040 (85 %) | 22 diff (97.9 %id) | ||
CB851910 | Human Lung Epithelial cells, lung | .b | 2599 to 3305 | 697 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 679/681 (99 %) | 0 diff (100 %id) | |
BM663447 | eye, RPE and Choroid | .b | 2803 to 3305 | 492 to 18 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 475/475 (100 %) | 9 diff (98.2 %id) | |
BM685537 | eye, RPE and Choroid | .b | 2451 to 2861 | 9 to 415 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 407/415 (98 %) | 6 diff (98.6 %id) | |
BM672953 | eye, optic nerve | .b | 5549 to 5975 | 445 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 427/427 (100 %) | 2 diff (99.6 %id) | |
BM686771 | eye, optic nerve | .b | 5145 to 5579 | 1 to 436 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 436/436 (100 %) | 7 diff (98.4 %id) | |
BM672475 | eye, optic nerve | .b | 4245 to 4665 | 439 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 421/421 (100 %) | 0 diff (100 %id) | |
BM687328 | eye, optic nerve | .b | 3712 to 4130 | 9 to 427 | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 419/427 (98 %) | 6 diff (98.6 %id) | ||
BM722087 | eye, fetal eye | .b | 3202 to 3274 | 205 to 277 | 218/280 (77 %) | 10 diff (96.5 %id) | |||
BM676901 | eye, fetal eye | .b | 2734 to 3305 | 562 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 544/544 (100 %) | 0 diff (100 %id) | |
BM720798 | eye, fetal eye | .b | 2226 to 2764 | 1 to 539 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 539/539 (100 %) | 1 diff (99.9 %id) | |
CA439196 | lung, Lung Focal Fibrosis | .b | 5066 to 5752 | 1 to 688 | Submitted on the opposite strand | 688/688 (100 %) | 9 diff (98.7 %id) | ||
CA449205 | Chondrosarcoma, Left Pubic Bone | .b | 2543 to 3305 | 753 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 735/735 (100 %) | 1 diff (99.9 %id) | |
DB275584 | uterus | .b | 1644 to 2189 | 2 to 547 | capped | 546/546 (100 %) | 1 diff (99.9 %id) | ||
BQ344996 | nervous_tumor | .b | 2651 to 3304 | 626 to 1 | This clone was ignored | 626/626 (100 %) | 0 diff (100 %id) | ||
DA567947 | .b | 4453 to 5251 | 1 to 808 | capped | This clone was ignored | 808/824 (98 %) | 14 diff (98.4 %id) | ||
DB318901 | .b | 4453 to 5251 | 1 to 808 | This clone was ignored | 808/824 (98 %) | 14 diff (98.4 %id) | |||
N21179 | melanocyte | .b | 2166 to 3019 | 1 to 867 | This clone was ignored | 865/891 (97 %) | 13 diff (98.6 %id) | ||
N29143 | melanocyte | .b | 2166 to 3019 | 1 to 867 | This clone was ignored | 865/891 (97 %) | 13 diff (98.6 %id) | ||
AV761881 | bone marrow | .b | 3202 to 3305 | 129 to 232 | Suspected internal deletion, this clone was ignored | 232/232 (100 %) | 0 diff (100 %id) | ||
DA781784 | brain | .b | 3202 to 3305 | 129 to 232 | capped | Suspected internal deletion, this clone was ignored | 232/232 (100 %) | 0 diff (100 %id) | |
TI_159696492 | .b | 3202 to 3305 | 257 to 359 | Suspected internal deletion, this clone was ignored | 359/359 (100 %) | 1 diff (99.8 %id) | |||
BU182695 | melanotic melanoma, skin | .b | 3202 to 3305 | 257 to 359 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 359/359 (100 %) | 1 diff (99.8 %id) | |
BQ672362 | epidermoid carcinoma, cell line, salivary gland | .b | 4822 to 5718 | 1 to 898 | 898/900 (99 %) | 10 diff (98.9 %id) | |||
BQ672362 | epidermoid carcinoma, cell line, salivary gland | .b | 4822 to 5718 | 1 to 898 | 898/900 (99 %) | 10 diff (98.9 %id) | |||
BQ936067 | large cell carcinoma, lung | .b | 93 to 645 | 100 to 660 | 561/1105 (50 %) | 29 diff (97.4 %id) | |||
BQ936067 | large cell carcinoma, lung | .b | 93 to 645 | 100 to 660 | 561/1105 (50 %) | 29 diff (97.4 %id) | |||
BQ941746 | large cell carcinoma, lung | .b | 1 to 896 | 22 to 920 | tiling clone, | 899/961 (93 %) | 29 diff (97.0 %id) | ||
BQ941746 | large cell carcinoma, lung | .b | 1 to 896 | 22 to 920 | tiling clone, | 899/961 (93 %) | 29 diff (97.0 %id) | ||
BU933042 | mixed (pool of 40 RNAs) | .b | 5254 to 6029 | 1 to 775 | 775/783 (98 %) | 16 diff (98.0 %id) | |||
BU941276 | mixed (pool of 40 RNAs) | .b | 4722 to 5368 | 1 to 656 | 656/933 (70 %) | 40 diff (95.8 %id) | |||
CX788961 | human embryonic stem cells | .b | 3960 to 4675 | 9 to 722 | tiling clone, | 714/722 (98 %) | 6 diff (99.2 %id) | ||
CX752573 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .b | 2749 to 3354 | 1 to 606 | tiling clone, | Submitted on the opposite strand | 606/606 (100 %) | 0 diff (100 %id) | |
CX752573 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .b | 2749 to 3354 | 1 to 606 | tiling clone, | Submitted on the opposite strand | 606/606 (100 %) | 0 diff (100 %id) | |
DR760184 | embryonic stem | .b | 3202 to 3355 | 45 to 198 | 198/198 (100 %) | 0 diff (100 %id) | |||
CB961685 | placenta, pre-eclamptic placenta | .a | 2 to 714 | 28 to 744 | tiling clone, | 717/803 (89 %) | 14 diff (98.3 %id) | ||
CB961685 | placenta, pre-eclamptic placenta | .a | 2 to 714 | 28 to 744 | tiling clone, | 717/803 (89 %) | 14 diff (98.3 %id) | ||
CD245374 | White Matter | .b | 1473 to 2372 | 26 to 936 | 888/937 (94 %) | 25 diff (97.4 %id) | |||
CD514546 | White Matter | .b | 4450 to 5224 | 11 to 790 | 780/902 (86 %) | 6 diff (99.4 %id) | |||
CF144162 | lymph | .b | 3669 to 3993 | 8 to 332 | 325/332 (97 %) | 6 diff (98.2 %id) | |||
CF596029 | Stomach, adenocarcinoma | .b | 4413 to 4954 | 1 to 549 | 549/737 (74 %) | 15 diff (98.0 %id) | |||
DA618766 | .b | 663 to 1167 | 2 to 506 | capped | 505/505 (100 %) | 1 diff (99.9 %id) | |||
TI_57220292 | .b | 347 to 1090 | 32 to 775 | 744/775 (96 %) | 9 diff (98.9 %id) | ||||
TI_57186768 | .b | 5265 to 5933 | 54 to 721 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 668/668 (100 %) | 1 diff (99.9 %id) | ||
TI_57186860 | .b | 5265 to 5933 | 56 to 721 | 666/948 (70 %) | 8 diff (99.2 %id) | ||||
TI_57192881 | .b | 3645 to 4481 | 55 to 883 | 829/834 (99 %) | 14 diff (98.4 %id) | ||||
TI_57230762 | .b | 3786 to 4526 | 56 to 796 | 741/741 (100 %) | 5 diff (99.4 %id) | ||||
TI_59380241 | .b | 3637 to 4527 | 96 to 988 | 893/893 (100 %) | 18 diff (98.0 %id) | ||||
CB114590 | Liver | .b | 3202 to 3356 | 24 to 175 | 175/175 (100 %) | 1 diff (99.5 %id) | |||
NM_004257.4 | .a | 25 to 2989 | 1 to 2965 | RefSeq, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 2965/2965 (100 %) | 0 diff (100 %id) | ||
NM_001142621.1 | .b | 344 to 3305 | 1 to 2962 | RefSeq, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 2962/2962 (100 %) | 0 diff (100 %id) | ||
DA804975 | brain | .b | 2176 to 2679 | 2 to 509 | capped | 508/508 (100 %) | 4 diff (99.3 %id) | ||
DA810614 | brain | .b | 2159 to 2703 | 2 to 546 | capped | 545/545 (100 %) | 0 diff (100 %id) | ||
BP328460 | rectum | .b | 1917 to 2498 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
CT002669 | T-Lymphocytes | .b | 449 to 1219 | 1 to 772 | 772/773 (99 %) | 6 diff (99.3 %id) | |||
TI_1948081794 | .b | 418 to 1064 | 117 to 761 | 645/1117 (57 %) | 28 diff (97.5 %id) | ||||
TI_1948081796 | .b | 2088 to 3014 | 1045 to 125 | 921/1151 (80 %) | 23 diff (98.1 %id) | ||||
TI_1948082018 | .b | 2250 to 3014 | 846 to 82 | 765/1078 (70 %) | 28 diff (97.5 %id) | ||||
TI_1948082226 | .b | 2709 to 3013 | 424 to 121 | 304/1129 (26 %) | 3 diff (99.8 %id) | ||||
TI_1948082453 | .b | 418 to 1060 | 115 to 760 | 646/1139 (56 %) | 33 diff (97.2 %id) | ||||
TI_1948082454 | .b | 418 to 1190 | 121 to 902 | 782/1375 (56 %) | 26 diff (98.2 %id) | ||||
TI_1948082455 | .b | 2175 to 3014 | 953 to 126 | 828/1101 (75 %) | 16 diff (98.6 %id) | ||||
DA913658 | .b | 2668 to 3135 | 2 to 469 | capped | 468/468 (100 %) | 0 diff (100 %id) | |||
DA946093 | Spleen | .d-u | 1 to 578 | 2 to 579 | exact | tiling clone, capped | 578/578 (100 %) | 3 diff (99.5 %id) | |
T15625 | .b | 5638 to 6030 | 399 to 1 | 399/483 (82 %) | 11 diff (97.8 %id) | ||||
T16844 | .b | 4650 to 4997 | 28 to 374 | 347/374 (92 %) | 3 diff (99.2 %id) | ||||
DA999308 | breast, tumor tissue | .b | 3618 to 4150 | 2 to 536 | capped | 535/535 (100 %) | 4 diff (99.3 %id) | ||
DN993139 | brain, whole brain | .b | 4213 to 4807 | 9 to 603 | 595/603 (98 %) | 6 diff (99.1 %id) | |||
DN993139 | brain, whole brain | .b | 4213 to 4807 | 9 to 603 | 595/603 (98 %) | 6 diff (99.1 %id) | |||
DN995868 | breast cancer, Mammary gland (cancer tissue) | .a | 91 to 677 | 39 to 625 | 587/625 (93 %) | 6 diff (99.1 %id) | |||
DN995868 | breast cancer, Mammary gland (cancer tissue) | .a | 91 to 677 | 39 to 625 | 587/625 (93 %) | 6 diff (99.1 %id) | |||
DB150781 | thymus | .b | 357 to 899 | 2 to 545 | capped | 544/544 (100 %) | 1 diff (99.9 %id) | ||
DB151659 | thymus | .b | 3202 to 3341 | 277 to 417 | capped | 416/416 (100 %) | 1 diff (99.8 %id) | ||
TI_154022742 | .b | 5071 to 5782 | 84 to 796 | Submitted on the opposite strand | 713/796 (89 %) | 7 diff (99.2 %id) | |||
TI_154037241 | .b | 4008 to 4663 | 746 to 74 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 673/826 (81 %) | 41 diff (95.1 %id) | ||
TI_154115480 | .b | 2396 to 3305 | 953 to 84 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 870/976 (89 %) | 18 diff (98.2 %id) | ||
TI_154151867 | .b | 364 to 1046 | 78 to 757 | 680/680 (100 %) | 22 diff (96.8 %id) | ||||
TI_154174158 | .b | 3669 to 4111 | 86 to 528 | 443/1123 (39 %) | 8 diff (99.3 %id) | ||||
TI_154175310 | .b | 3669 to 4102 | 92 to 528 | 437/1193 (36 %) | 10 diff (99.2 %id) | ||||
TI_159713763 | .b | 2381 to 3305 | 973 to 85 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 889/1040 (85 %) | 22 diff (97.9 %id) | ||
CB851910 | Human Lung Epithelial cells, lung | .b | 2599 to 3305 | 697 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 679/681 (99 %) | 0 diff (100 %id) | |
CB851910 | Human Lung Epithelial cells, lung | .b | 2599 to 3305 | 697 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 679/681 (99 %) | 0 diff (100 %id) | |
BM663447 | eye, RPE and Choroid | .b | 2803 to 3305 | 492 to 18 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 475/475 (100 %) | 9 diff (98.2 %id) | |
BM663447 | eye, RPE and Choroid | .b | 2803 to 3305 | 492 to 18 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 475/475 (100 %) | 9 diff (98.2 %id) | |
BM685537 | eye, RPE and Choroid | .b | 2451 to 2861 | 9 to 415 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 407/415 (98 %) | 6 diff (98.6 %id) | |
BM685537 | eye, RPE and Choroid | .b | 2451 to 2861 | 9 to 415 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 407/415 (98 %) | 6 diff (98.6 %id) | |
BM672953 | eye, optic nerve | .b | 5549 to 5975 | 445 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 427/427 (100 %) | 2 diff (99.6 %id) | |
BM672953 | eye, optic nerve | .b | 5549 to 5975 | 445 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 427/427 (100 %) | 2 diff (99.6 %id) | |
BM686771 | eye, optic nerve | .b | 5145 to 5579 | 1 to 436 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 436/436 (100 %) | 7 diff (98.4 %id) | |
BM686771 | eye, optic nerve | .b | 5145 to 5579 | 1 to 436 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 436/436 (100 %) | 7 diff (98.4 %id) | |
BM672475 | eye, optic nerve | .b | 4245 to 4665 | 439 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 421/421 (100 %) | 0 diff (100 %id) | |
BM672475 | eye, optic nerve | .b | 4245 to 4665 | 439 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 421/421 (100 %) | 0 diff (100 %id) | |
BM687328 | eye, optic nerve | .b | 3712 to 4130 | 9 to 427 | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 419/427 (98 %) | 6 diff (98.6 %id) | ||
BM687328 | eye, optic nerve | .b | 3712 to 4130 | 9 to 427 | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 419/427 (98 %) | 6 diff (98.6 %id) | ||
BM722087 | eye, fetal eye | .b | 3202 to 3274 | 205 to 277 | 218/280 (77 %) | 10 diff (96.5 %id) | |||
BM722087 | eye, fetal eye | .b | 3202 to 3274 | 205 to 277 | 218/280 (77 %) | 10 diff (96.5 %id) | |||
BM676901 | eye, fetal eye | .b | 2734 to 3305 | 562 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 544/544 (100 %) | 0 diff (100 %id) | |
BM676901 | eye, fetal eye | .b | 2734 to 3305 | 562 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 544/544 (100 %) | 0 diff (100 %id) | |
BM720798 | eye, fetal eye | .b | 2226 to 2764 | 1 to 539 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 539/539 (100 %) | 1 diff (99.9 %id) | |
BM720798 | eye, fetal eye | .b | 2226 to 2764 | 1 to 539 | fully sequenced, | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 539/539 (100 %) | 1 diff (99.9 %id) | |
CA439196 | lung, Lung Focal Fibrosis | .b | 5066 to 5752 | 1 to 688 | Submitted on the opposite strand | 688/688 (100 %) | 9 diff (98.7 %id) | ||
CA439196 | lung, Lung Focal Fibrosis | .b | 5066 to 5752 | 1 to 688 | Submitted on the opposite strand | 688/688 (100 %) | 9 diff (98.7 %id) | ||
CA449205 | Chondrosarcoma, Left Pubic Bone | .b | 2543 to 3305 | 753 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 735/735 (100 %) | 1 diff (99.9 %id) | |
CA449205 | Chondrosarcoma, Left Pubic Bone | .b | 2543 to 3305 | 753 to 19 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 735/735 (100 %) | 1 diff (99.9 %id) | |
DB275584 | uterus | .b | 1644 to 2189 | 2 to 547 | capped | 546/546 (100 %) | 1 diff (99.9 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c-u, .d-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes DCI |