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Gene VPS72andTMOD4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
538 supporting clones for gene VPS72andTMOD4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
R55847 whole brain VPS72andTMOD4.a -8 to 416 3 to 433   tiling clone, to resequence,   431/447
(96 %)
6 diff
(98.7 %id)
R55768 whole brain VPS72andTMOD4.a 1330 to 1763 456 to 10   tiling clone, to resequence,   443/463
(95 %)
27 diff
(94.2 %id)
DN996175 breast cancer, Mammary gland (cancer tissue) VPS72andTMOD4.b 1 to 550 1 to 550   tiling clone,   550/550
(100 %)
2 diff
(99.7 %id)
CB141104 Liver VPS72andTMOD4.b 11 to 495 1 to 485       485/485
(100 %)
0 diff
(100 %id)
BE793227 lung, small cell carcinoma VPS72andTMOD4.b 12 to 763 1 to 750       750/959
(78 %)
12 diff
(98.8 %id)
BU152677 carcinoma, cell line, Prostate VPS72andTMOD4.b 12 to 770 1 to 769       769/938
(81 %)
31 diff
(96.7 %id)
AW630394 2 pooled high-grade transitional celltumors, genitourinary tract VPS72andTMOD4.b 15 to 469 1 to 455       455/456
(99 %)
3 diff
(99.4 %id)
CX781981 human embryonic stem cells VPS72andTMOD4.b 18 to 763 1 to 746       746/875
(85 %)
93 diff
(89.4 %id)
CX163016 human embryonic stem cells differentiated toan early endodermal cell type VPS72andTMOD4.b 20 to 831 1 to 812   tiling clone,   812/812
(100 %)
0 diff
(100 %id)
TI_57243741   VPS72andTMOD4.b 23 to 627 26 to 630       605/630
(96 %)
7 diff
(98.9 %id)
BQ213085 melanotic melanoma, skin VPS72andTMOD4.b 27 to 764 61 to 801       741/967
(76 %)
20 diff
(98.0 %id)
CN295289 embryonic stem cells, cell lines H1, H7, andH9 VPS72andTMOD4.b 30 to 686 1 to 657       657/658
(99 %)
2 diff
(99.7 %id)
CN295296 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 VPS72andTMOD4.b 30 to 705 1 to 676       676/676
(100 %)
0 diff
(100 %id)
CN295298 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 VPS72andTMOD4.b 30 to 648 9 to 627       619/628
(98 %)
7 diff
(98.9 %id)
CX869962 embryonic stem VPS72andTMOD4.b 35 to 677 1 to 643       643/643
(100 %)
0 diff
(100 %id)
CX755776 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.b 40 to 747 1 to 698     Submitted on the opposite strand 698/795
(87 %)
13 diff
(98.4 %id)
BI115578 lung, small cell carcinoma VPS72andTMOD4.b 44 to 645 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
BE787915 large cell carcinoma, lung VPS72andTMOD4.b 45 to 763 1 to 713       713/914
(78 %)
28 diff
(97.0 %id)
BF033872 adenocarcinoma, ovary VPS72andTMOD4.b 46 to 751 1 to 703       703/704
(99 %)
17 diff
(97.6 %id)
BE777952 eye, retinoblastoma VPS72andTMOD4.b 46 to 760 1 to 711       711/775
(91 %)
14 diff
(98.2 %id)
BG331071 large cell carcinoma, lung VPS72andTMOD4.b 52 to 665 46 to 666       621/954
(65 %)
16 diff
(98.4 %id)
BG470313 adenocarcinoma cell line, colon VPS72andTMOD4.b 53 to 691 95 to 745       651/852
(76 %)
20 diff
(97.7 %id)
BG824097 adenocarcinoma cell line, colon VPS72andTMOD4.b 53 to 763 95 to 810       716/812
(88 %)
15 diff
(98.2 %id)
TI_1948123463   VPS72andTMOD4.b 54 to 741 132 to 824       693/1317
(52 %)
27 diff
(98.0 %id)
BG482008 choriocarcinoma, placenta VPS72andTMOD4.b 56 to 681 1 to 627       627/627
(100 %)
12 diff
(98.1 %id)
CV026083 mixed VPS72andTMOD4.b 57 to 705 1 to 649       649/649
(100 %)
3 diff
(99.6 %id)
DR422961 eye, Pterygium VPS72andTMOD4.b 58 to 727 1 to 670       670/670
(100 %)
0 diff
(100 %id)
AA205244   VPS72andTMOD4.b 68 to 536 1 to 470       470/470
(100 %)
3 diff
(99.4 %id)
BP262802 small intestine VPS72andTMOD4.b 87 to 668 1 to 582       582/583
(99 %)
17 diff
(97.1 %id)
BQ305878 breast VPS72andTMOD4.b 122 to 708 19 to 601       583/602
(96 %)
15 diff
(97.6 %id)
BQ307097 breast VPS72andTMOD4.b 129 to 694 1 to 563       563/565
(99 %)
11 diff
(98.1 %id)
BQ307077 breast VPS72andTMOD4.b 133 to 694 13 to 571       559/579
(96 %)
24 diff
(95.9 %id)
BQ305848 breast VPS72andTMOD4.b 134 to 633 2 to 508       517/508
(101 %)
56 diff
(89.0 %id)
BQ305864 breast VPS72andTMOD4.b 134 to 706 5 to 585       590/585
(100 %)
52 diff
(91.2 %id)
BQ306066 breast VPS72andTMOD4.b 134 to 721 1 to 594       604/594
(101 %)
64 diff
(89.3 %id)
BQ307062 breast VPS72andTMOD4.b 134 to 694 3 to 579       584/579
(100 %)
63 diff
(89.2 %id)
BQ305875 breast VPS72andTMOD4.b 139 to 694 1 to 550       550/552
(99 %)
16 diff
(97.2 %id)
CX756564 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.b 168 to 724 1 to 549     Submitted on the opposite strand 549/674
(81 %)
21 diff
(96.9 %id)
CB219131 mandible, pooled VPS72andTMOD4.b 201 to 704 125 to 628     Submitted on the opposite strand 504/628
(80 %)
6 diff
(99.1 %id)
AL035978 brain VPS72andTMOD4.b 246 to 628 1 to 383       383/383
(100 %)
1 diff
(99.8 %id)
BE160873 head_neck VPS72andTMOD4.b 333 to 727 399 to 4     Submitted on the opposite strand 396/399
(99 %)
16 diff
(96.0 %id)
AA331111 embryo VPS72andTMOD4.b 381 to 719 1 to 349       349/357
(97 %)
15 diff
(95.8 %id)
BF808332 colon_ins VPS72andTMOD4.b 383 to 744 14 to 379       366/379
(96 %)
8 diff
(97.9 %id)
AW384349 head_neck VPS72andTMOD4.b 795 to 1074 37 to 316   tiling clone,   280/339
(82 %)
9 diff
(97.4 %id)
BF058281 fibrotheoma, ovary VPS72andTMOD4.b 832 to 1157 327 to 2   tiling clone,   326/355
(91 %)
0 diff
(100 %id)
EC549742 Prostate VPS72andTMOD4.b 907 to 1024 1 to 113   tiling clone,   113/113
(100 %)
8 diff
(93.0 %id)
BF899009 marrow VPS72andTMOD4.b 933 to 1121 6 to 193   tiling clone,   188/193
(97 %)
6 diff
(96.9 %id)
AA635744 normal prostate, Prostate VPS72andTMOD4.b 1008 to 1059 52 to 1       52/52
(100 %)
0 diff
(100 %id)
BG026012 Bone, osteosarcoma, cell line VPS72andTMOD4.b 1040 to 1331 1 to 299   tiling clone, AAA   299/299
(100 %)
25 diff
(91.7 %id)
AA205171   VPS72andTMOD4.b 1196 to 1329 136 to 3   tiling clone,   134/138
(97 %)
0 diff
(100 %id)
EC538948 Prostate VPS72andTMOD4.b 1226 to 1325 102 to 4       99/106
(93 %)
0 diff
(100 %id)
AW627363 2 pooled high-grade transitional celltumors, genitourinary tract VPS72andTMOD4.b 1249 to 1484 241 to 6   tiling clone,   236/241
(97 %)
0 diff
(100 %id)
AI591193 brain, tumor, 5 pooled (see description) VPS72andTMOD4.b 1283 to 1480 214 to 17   AAA   198/198
(100 %)
3 diff
(98.5 %id)
AW194498 adenocarcinoma, Pancreas VPS72andTMOD4.b 1333 to 1487 171 to 17   AAA   155/155
(100 %)
1 diff
(99.4 %id)
TI_149294055   VPS72andTMOD4.b 1462 to 2170 786 to 79   tiling clone, AAA   708/708
(100 %)
1 diff
(99.9 %id)
BM984972 lung VPS72andTMOD4.b 1504 to 2170 683 to 17   AAA   667/667
(100 %)
0 diff
(100 %id)
DQ655941   VPS72andTMOD4.c 1 to 444 1 to 444   tiling clone,   444/445
(99 %)
3 diff
(99.4 %id)
CX756840 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.c 4 to 719 1 to 715   tiling clone, Submitted on the opposite strand 715/715
(100 %)
1 diff
(99.9 %id)
BM706796 eye, optic nerve VPS72andTMOD4.c 12 to 585 1 to 574       574/574
(100 %)
6 diff
(99.0 %id)
DA659378   VPS72andTMOD4.c 16 to 544 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DT214960 brain VPS72andTMOD4.c 18 to 681 1 to 664       664/664
(100 %)
0 diff
(100 %id)
DT216634 brain VPS72andTMOD4.c 18 to 587 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
AU099529   VPS72andTMOD4.c 18 to 317 1 to 300       300/300
(100 %)
0 diff
(100 %id)
BP262701 small intestine VPS72andTMOD4.c 18 to 598 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BM753514 stomach VPS72andTMOD4.c 18 to 494 1 to 478       478/478
(100 %)
7 diff
(98.6 %id)
DA054401 cerebellum VPS72andTMOD4.c 19 to 575 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA351321 substantia nigra VPS72andTMOD4.c 19 to 602 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA474986   VPS72andTMOD4.c 19 to 561 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA869385 Prostate VPS72andTMOD4.c 19 to 532 2 to 519   capped   518/518
(100 %)
5 diff
(99.1 %id)
DA899510 skeletal muscle VPS72andTMOD4.c 19 to 532 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA899994 skeletal muscle VPS72andTMOD4.c 19 to 575 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BP316137 pericardium VPS72andTMOD4.c 22 to 604 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA894339 skeletal muscle VPS72andTMOD4.c 22 to 509 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
AL708339 human skeletal muscle VPS72andTMOD4.c 26 to 486 1 to 461       461/462
(99 %)
6 diff
(98.8 %id)
CN483072 eye VPS72andTMOD4.c 26 to 586 1 to 561       561/561
(100 %)
0 diff
(100 %id)
TI_44170359   VPS72andTMOD4.c 27 to 655 83 to 712       630/801
(78 %)
23 diff
(97.2 %id)
BI116660 lung, small cell carcinoma VPS72andTMOD4.c 28 to 800 1 to 778       778/882
(88 %)
17 diff
(98.1 %id)
BF725898 eye, Iris VPS72andTMOD4.c 29 to 541 1 to 513       513/513
(100 %)
0 diff
(100 %id)
BI553349 brain, hippocampus VPS72andTMOD4.c 29 to 655 1 to 629       629/718
(87 %)
22 diff
(97.0 %id)
DA928659 small intestine VPS72andTMOD4.c 29 to 556 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
CB990866 placenta, pre-eclamptic placenta VPS72andTMOD4.c 31 to 480 28 to 481       454/1013
(44 %)
17 diff
(98.4 %id)
CB990318 Human Placenta, placenta VPS72andTMOD4.c 31 to 786 29 to 790       762/806
(94 %)
17 diff
(97.9 %id)
BM752428 Ascites, stomach VPS72andTMOD4.c 31 to 508 1 to 478       478/478
(100 %)
0 diff
(100 %id)
R88064 brain VPS72andTMOD4.c 38 to 470 1 to 441       439/460
(95 %)
18 diff
(96.1 %id)
R88054 brain VPS72andTMOD4.c 44 to 447 5 to 415       409/420
(97 %)
18 diff
(95.8 %id)
AW732455 Kidney, renal cell adenocarcinoma VPS72andTMOD4.c 62 to 534 1 to 473       473/476
(99 %)
22 diff
(95.4 %id)
BM716223 eye, RPE and Choroid VPS72andTMOD4.c 70 to 189 1 to 122       122/126
(96 %)
3 diff
(97.7 %id)
AA279834 germinal center B cell VPS72andTMOD4.c 79 to 367 1 to 288       288/347
(82 %)
16 diff
(95.4 %id)
BU539181 adenocarcinoma, cell line, breast VPS72andTMOD4.c 630 to 1402 17 to 795   tiling clone,   779/963
(80 %)
16 diff
(98.4 %id)
AW665372 pooled VPS72andTMOD4.c 833 to 1216 384 to 1       384/439
(87 %)
17 diff
(96.2 %id)
BU732195 eye, RPE and Choroid VPS72andTMOD4.c 838 to 1406 587 to 19   tiling clone, AAA   569/569
(100 %)
0 diff
(100 %id)
AI380978 B-cell, chronic lymphotic leukemia VPS72andTMOD4.c 841 to 1232 393 to 2       392/393
(99 %)
0 diff
(100 %id)
BQ307061 breast VPS72andTMOD4.c 858 to 1265 425 to 3       423/425
(99 %)
0 diff
(100 %id)
AA633792   VPS72andTMOD4.c 889 to 1217 484 to 158       327/484
(67 %)
0 diff
(100 %id)
BM672878 eye, optic nerve VPS72andTMOD4.c 918 to 1406 507 to 19   AAA   489/489
(100 %)
0 diff
(100 %id)
BQ361543 ovary VPS72andTMOD4.c 967 to 1254 318 to 31       288/341
(84 %)
0 diff
(100 %id)
R88065 brain VPS72andTMOD4.c 999 to 1372 375 to 1       375/375
(100 %)
3 diff
(99.2 %id)
AA279675 germinal center B cell VPS72andTMOD4.c 1018 to 1406 389 to 1       389/389
(100 %)
3 diff
(99.3 %id)
BE208813 Kidney, renal cell adenocarcinoma VPS72andTMOD4.c 1028 to 1401 383 to 11   AAA   373/373
(100 %)
16 diff
(95.8 %id)
R88055 brain VPS72andTMOD4.c 1035 to 1379 345 to 1       345/346
(99 %)
2 diff
(99.5 %id)
T32068 brain VPS72andTMOD4.c 1164 to 1406 243 to 1       243/243
(100 %)
0 diff
(100 %id)
BM471020 melanotic melanoma, skin VPS72andTMOD4.d 1 to 935 32 to 967   tiling clone,   936/1022
(91 %)
20 diff
(98.1 %id)
CR608392 HeLa cells Cot 25-normalized VPS72andTMOD4.d 7 to 1351 1 to 1345 exact     1345/1345
(100 %)
0 diff
(100 %id)
BX342187   VPS72andTMOD4.d 7 to 1102 1 to 1080       1080/1120
(96 %)
22 diff
(98.1 %id)
BU501942 epithelioid carcinoma cell line, Pancreas VPS72andTMOD4.d 7 to 929 1 to 924       924/929
(99 %)
9 diff
(99.1 %id)
CF130985 Chondrosarcoma Lung Metastasis cell lines, lung VPS72andTMOD4.d 13 to 739 1 to 726       726/726
(100 %)
4 diff
(99.5 %id)
TI_154193741   VPS72andTMOD4.d 13 to 923 51 to 954       904/1024
(88 %)
19 diff
(98.2 %id)
BF978457 melanotic melanoma, high MDR, skin VPS72andTMOD4.d 15 to 697 1 to 679       679/915
(74 %)
15 diff
(98.4 %id)
BI550246 brain, hippocampus VPS72andTMOD4.d 15 to 845 1 to 832       832/832
(100 %)
15 diff
(98.2 %id)
BF796903 lymph, lymphoma, cell line VPS72andTMOD4.d 22 to 783 1 to 763       763/1012
(75 %)
33 diff
(96.8 %id)
DR155400 human embryonic stem cells differentiated toan early endodermal cell type VPS72andTMOD4.d 22 to 864 1 to 843       843/843
(100 %)
1 diff
(99.9 %id)
TI_44169453   VPS72andTMOD4.d 22 to 845 89 to 913       825/913
(90 %)
16 diff
(98.3 %id)
BG437543 large cell carcinoma, lung VPS72andTMOD4.d 24 to 928 1 to 905       905/939
(96 %)
36 diff
(96.2 %id)
CX762644 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.d 24 to 766 1 to 743     Submitted on the opposite strand 743/743
(100 %)
0 diff
(100 %id)
CN295290 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 VPS72andTMOD4.d 25 to 699 1 to 676       676/676
(100 %)
2 diff
(99.8 %id)
BM804874 ovary (pool of 3) VPS72andTMOD4.d 25 to 965 29 to 969       941/969
(97 %)
17 diff
(98.3 %id)
BQ676167 melanotic melanoma, cell line, skin VPS72andTMOD4.d 25 to 848 22 to 858       837/957
(87 %)
22 diff
(97.8 %id)
BQ676134 melanotic melanoma, cell line, skin VPS72andTMOD4.d 25 to 902 18 to 898       881/898
(98 %)
24 diff
(97.4 %id)
BX106111 brain VPS72andTMOD4.d 26 to 714 28 to 716       689/716
(96 %)
7 diff
(99.1 %id)
BE799996 lung, small cell carcinoma VPS72andTMOD4.d 26 to 853 1 to 836       836/1184
(70 %)
25 diff
(97.9 %id)
BI668947 brain, hypothalamus VPS72andTMOD4.d 26 to 783 1 to 761       761/826
(92 %)
15 diff
(98.2 %id)
BU149622 epidermoid carcinoma, cell line, salivary gland VPS72andTMOD4.d 26 to 1011 1 to 996       996/996
(100 %)
26 diff
(97.4 %id)
CX873452 embryonic stem VPS72andTMOD4.d 26 to 897 1 to 872       872/872
(100 %)
1 diff
(99.9 %id)
CR599798 Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 28 to 1319 1 to 1292 E39*     1292/1292
(100 %)
1 diff
(100.0 %id)
CR623974 HeLa cells Cot 25-normalized VPS72andTMOD4.d 28 to 1327 1 to 1300 exact     1300/1300
(100 %)
0 diff
(100 %id)
BX442205 brain, fetal brain VPS72andTMOD4.d 28 to 906 1 to 879       879/879
(100 %)
2 diff
(99.8 %id)
TI_57161909   VPS72andTMOD4.d 28 to 783 27 to 785       759/966
(78 %)
9 diff
(99.1 %id)
AU309873 neuroblastoma VPS72andTMOD4.d 28 to 535 18 to 525       508/508
(100 %)
0 diff
(100 %id)
AL526239 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 29 to 668 1 to 641   fully sequenced,   641/641
(100 %)
6 diff
(99.1 %id)
BX458408 placenta VPS72andTMOD4.d 29 to 1011 1 to 979       979/979
(100 %)
11 diff
(98.9 %id)
AL555553 placenta VPS72andTMOD4.d 29 to 668 1 to 640   fully sequenced,   640/640
(100 %)
5 diff
(99.3 %id)
BF344437 brain, glioblastoma with EGFR amplification VPS72andTMOD4.d 29 to 847 1 to 809       809/856
(94 %)
34 diff
(96.1 %id)
BF529427 anaplastic oligodendroglioma with 1p/19qloss, brain VPS72andTMOD4.d 29 to 782 1 to 761   AAA   761/1058
(71 %)
24 diff
(97.8 %id)
BG612471 embryonal carcinoma, testis VPS72andTMOD4.d 29 to 797 1 to 769       769/769
(100 %)
17 diff
(97.8 %id)
BQ940925 large cell carcinoma, lung VPS72andTMOD4.d 30 to 848 20 to 847       828/866
(95 %)
21 diff
(97.6 %id)
TI_57163731   VPS72andTMOD4.d 30 to 1001 32 to 1020       944/1020
(92 %)
26 diff
(97.5 %id)
BF209956 bone marrow, from chronic myelogenous leukemia VPS72andTMOD4.d 31 to 697 1 to 658       658/890
(73 %)
26 diff
(97.1 %id)
BF337337 brain, glioblastoma with EGFR amplification VPS72andTMOD4.d 32 to 762 5 to 737       733/1110
(66 %)
30 diff
(97.3 %id)
D43642   VPS72andTMOD4.d 33 to 1356 1 to 1324 exact tiling clone,   1324/1324
(100 %)
0 diff
(100 %id)
AW163055 brain, frontal lobe VPS72andTMOD4.d 33 to 648 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
BI834270 pooled pancreas and spleen VPS72andTMOD4.d 33 to 1001 1 to 986       941/986
(95 %)
20 diff
(98.0 %id)
NM_005997.1   VPS72andTMOD4.d 33 to 1356 1 to 1324 exact RefSeq,   1324/1324
(100 %)
0 diff
(100 %id)
TI_44345654   VPS72andTMOD4.d 34 to 845 89 to 906       818/906
(90 %)
22 diff
(97.6 %id)
AA121612 brain, neuroepithelial cells VPS72andTMOD4.d 35 to 598 1 to 571       550/571
(96 %)
35 diff
(93.9 %id)
AI815713 brain, frontal lobe VPS72andTMOD4.d 35 to 549 1 to 515       515/515
(100 %)
2 diff
(99.7 %id)
BG330666 large cell carcinoma, lung VPS72andTMOD4.d 35 to 794 1 to 769       765/1106
(69 %)
25 diff
(97.8 %id)
BG397769 B-cells, primary B-cells from tonsils (cell line) VPS72andTMOD4.d 35 to 950 1 to 913       913/914
(99 %)
20 diff
(97.9 %id)
TI_57202042   VPS72andTMOD4.d 35 to 829 25 to 833       791/833
(94 %)
42 diff
(95.0 %id)
TI_57179106   VPS72andTMOD4.d 35 to 925 29 to 924       896/924
(96 %)
23 diff
(97.6 %id)
BM549534 melanotic melanoma, skin VPS72andTMOD4.d 36 to 1012 1 to 990       990/1028
(96 %)
19 diff
(98.2 %id)
CR599603 Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 37 to 1323 1 to 1287 exact     1287/1287
(100 %)
0 diff
(100 %id)
AL524802 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 37 to 782 1 to 746       746/1122
(66 %)
0 diff
(100 %id)
BG330897 large cell carcinoma, lung VPS72andTMOD4.d 37 to 864 1 to 840       840/853
(98 %)
36 diff
(95.8 %id)
BG818133 anaplastic oligodendroglioma with 1p/19qloss, brain VPS72andTMOD4.d 38 to 782 9 to 755       747/877
(85 %)
22 diff
(97.5 %id)
BQ223347 melanotic melanoma, skin VPS72andTMOD4.d 38 to 769 1 to 738       738/889
(83 %)
13 diff
(98.6 %id)
AL549696 placenta, Placenta Cot 25-normalized VPS72andTMOD4.d 39 to 419 1 to 381   fully sequenced,   381/381
(100 %)
0 diff
(100 %id)
CN295295 embryonic stem cells, DMSO-treated H9 cellline VPS72andTMOD4.d 40 to 662 1 to 623       623/623
(100 %)
3 diff
(99.6 %id)
TI_57242090   VPS72andTMOD4.d 40 to 846 33 to 846       814/846
(96 %)
16 diff
(98.2 %id)
BC003151 Kidney, renal cell adenocarcinoma VPS72andTMOD4.d 42 to 1350 1 to 1309 exact available from MGC, AAA   1309/1309
(100 %)
0 diff
(100 %id)
AW630898 2 pooled high-grade transitional celltumors, genitourinary tract VPS72andTMOD4.d 42 to 510 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
AW674730 cervix VPS72andTMOD4.d 43 to 635 1 to 589       589/601
(98 %)
22 diff
(96.4 %id)
CX868314.
matches multiple genes
embryonic stem VPS72andTMOD4.d 44 to 764 1 to 721     also hits gene RNMTL1 721/721
(100 %)
0 diff
(100 %id)
CX753636 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.d 45 to 708 1 to 661       661/877
(75 %)
6 diff
(99.4 %id)
BY800183 eye VPS72andTMOD4.d 46 to 671 1 to 626       626/626
(100 %)
0 diff
(100 %id)
BE910602 epithelioid carcinoma, Pancreas VPS72andTMOD4.d 46 to 752 1 to 711       711/994
(71 %)
19 diff
(98.1 %id)
BU538644 adenocarcinoma, cell line, breast VPS72andTMOD4.d 46 to 899 1 to 854       854/854
(100 %)
0 diff
(100 %id)
BE792526 lung, small cell carcinoma VPS72andTMOD4.d 47 to 835 1 to 784       784/784
(100 %)
11 diff
(98.6 %id)
CX870735 embryonic stem VPS72andTMOD4.d 47 to 862 1 to 816       816/816
(100 %)
0 diff
(100 %id)
CR598351 fetal brain VPS72andTMOD4.d 50 to 1344 1 to 1295 exact     1295/1295
(100 %)
0 diff
(100 %id)
AL534716 brain, fetal brain VPS72andTMOD4.d 50 to 668 1 to 619   fully sequenced,   619/619
(100 %)
0 diff
(100 %id)
BQ279112 adenocarcinoma, cell line, breast VPS72andTMOD4.d 54 to 930 1 to 880       880/978
(89 %)
7 diff
(99.3 %id)
BF983055 duodenal adenocarcinoma, cell line, small intestine VPS72andTMOD4.d 56 to 839 1 to 773       773/828
(93 %)
18 diff
(97.9 %id)
DR158568 human embryonic stem cells differentiated toan early endodermal cell type VPS72andTMOD4.d 57 to 861 1 to 805       805/805
(100 %)
0 diff
(100 %id)
AK222935 Kidney VPS72andTMOD4.d 60 to 1329 1 to 1270 Y30H T53I     1270/1270
(100 %)
2 diff
(99.9 %id)
AK222939 Kidney VPS72andTMOD4.d 60 to 1351 1 to 1292 Y30H T53I AAA   1292/1292
(100 %)
2 diff
(99.9 %id)
BE894813 melanotic melanoma, skin VPS72andTMOD4.d 64 to 846 1 to 780       783/1039
(75 %)
25 diff
(97.6 %id)
BU507121 leiomyosarcoma, uterus VPS72andTMOD4.d 68 to 926 1 to 867       867/941
(92 %)
21 diff
(97.8 %id)
DR760556 embryonic stem VPS72andTMOD4.d 71 to 907 1 to 837       837/837
(100 %)
2 diff
(99.8 %id)
CR621971 T cells (Jurkat cell line) VPS72andTMOD4.d 75 to 1288 1 to 1214 exact     1214/1214
(100 %)
0 diff
(100 %id)
AL556957 T cells (Jurkat cell line), T cells from T cell leukemia VPS72andTMOD4.d 75 to 1136 1 to 1054   fully sequenced,   1054/1054
(100 %)
11 diff
(99.0 %id)
BT019356   VPS72andTMOD4.d 76 to 1168 1 to 1093       1093/1095
(99 %)
2 diff
(99.9 %id)
BT019357   VPS72andTMOD4.d 76 to 1168 1 to 1093       1093/1095
(99 %)
1 diff
(100.0 %id)
DR159606 human embryonic stem cells differentiated toan early endodermal cell type VPS72andTMOD4.d 125 to 907 1 to 783       783/783
(100 %)
0 diff
(100 %id)
TI_57181070   VPS72andTMOD4.d 141 to 991 66 to 911       846/1108
(76 %)
26 diff
(97.7 %id)
BM792617 Ascites, stomach VPS72andTMOD4.d 149 to 807 1 to 659       659/659
(100 %)
1 diff
(99.9 %id)
BU955858 adenocarcinoma, cell line, breast VPS72andTMOD4.d 157 to 1032 40 to 922       884/959
(92 %)
30 diff
(96.9 %id)
BU539222 adenocarcinoma, cell line, breast VPS72andTMOD4.d 158 to 977 1 to 827       827/857
(96 %)
12 diff
(98.6 %id)
BU944151 adenocarcinoma, cell line, breast VPS72andTMOD4.d 158 to 1077 1 to 924       924/929
(99 %)
12 diff
(98.8 %id)
BU957427 adenocarcinoma, cell line, breast VPS72andTMOD4.d 191 to 1106 1 to 921       921/921
(100 %)
15 diff
(98.4 %id)
Z42354 brain, total brain VPS72andTMOD4.d 305 to 656 1 to 352       352/352
(100 %)
0 diff
(100 %id)
BM792072 Ascites, stomach VPS72andTMOD4.d 346 to 1011 1 to 665       665/665
(100 %)
2 diff
(99.7 %id)
TI_154121225   VPS72andTMOD4.d 348 to 1183 921 to 90   AAA   832/989
(84 %)
5 diff
(99.5 %id)
CB219132 mandible, pooled VPS72andTMOD4.d 370 to 970 601 to 1     Submitted on the opposite strand 601/601
(100 %)
2 diff
(99.7 %id)
CN295299 embryonic stem cells, cell lines H1, H7, andH9 VPS72andTMOD4.d 389 to 926 1 to 538       538/538
(100 %)
4 diff
(99.3 %id)
AL573798 placenta, Placenta Cot 25-normalized VPS72andTMOD4.d 389 to 1325 961 to 19   fully sequenced, AAA   943/943
(100 %)
25 diff
(97.4 %id)
BU155042 melanotic melanoma, skin VPS72andTMOD4.d 451 to 1181 1 to 744       744/826
(90 %)
21 diff
(97.5 %id)
TI_159723486   VPS72andTMOD4.d 452 to 1351 950 to 56   AAA   895/1021
(87 %)
29 diff
(97.2 %id)
BG118270 adenocarcinoma, cell line, Liver VPS72andTMOD4.d 453 to 915 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
BE905946 epithelioid carcinoma, Pancreas VPS72andTMOD4.d 456 to 895 1 to 440       440/440
(100 %)
0 diff
(100 %id)
TI_149313475   VPS72andTMOD4.d 460 to 1356 977 to 85   AAA   893/1002
(89 %)
17 diff
(98.4 %id)
BQ359487 head_normal VPS72andTMOD4.d 515 to 955 460 to 19       442/472
(93 %)
0 diff
(100 %id)
W69397 heart VPS72andTMOD4.d 523 to 897 1 to 377       377/377
(100 %)
6 diff
(98.5 %id)
TI_227713662   VPS72andTMOD4.d 524 to 1355 943 to 115   AAA   829/972
(85 %)
14 diff
(98.6 %id)
BX331057   VPS72andTMOD4.d 531 to 1347 825 to 6       820/916
(89 %)
13 diff
(98.6 %id)
BM792143 Ascites, stomach VPS72andTMOD4.d 534 to 1176 1 to 643       643/643
(100 %)
4 diff
(99.4 %id)
BF983909 duodenal adenocarcinoma, cell line, small intestine VPS72andTMOD4.d 537 to 1316 1 to 777       777/845
(91 %)
16 diff
(98.2 %id)
AA047708 heart VPS72andTMOD4.d 542 to 973 1 to 435   fully sequenced,   435/435
(100 %)
3 diff
(99.4 %id)
TI_149300047   VPS72andTMOD4.d 544 to 1355 885 to 77   AAA   809/994
(81 %)
7 diff
(99.3 %id)
TI_227715503   VPS72andTMOD4.d 547 to 1352 931 to 137   AAA   795/936
(84 %)
44 diff
(95.3 %id)
TI_153951071   VPS72andTMOD4.d 549 to 1180 87 to 716   fully sequenced, AAA   630/716
(87 %)
11 diff
(98.5 %id)
BM854130 Ascites, stomach VPS72andTMOD4.d 552 to 1024 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BG575391 breast, mammary adenocarcinoma, cell line VPS72andTMOD4.d 553 to 915 1 to 363       363/363
(100 %)
0 diff
(100 %id)
BG981573 colon_normal VPS72andTMOD4.d 571 to 819 262 to 17       246/262
(93 %)
5 diff
(98.1 %id)
BU599414 mixed (pool of 40 RNAs) VPS72andTMOD4.d 573 to 1352 1 to 789       789/821
(96 %)
35 diff
(95.8 %id)
BQ326447 colon_normal VPS72andTMOD4.d 580 to 855 287 to 14       274/296
(92 %)
4 diff
(98.7 %id)
AL562641 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 607 to 1319 713 to 1   fully sequenced,   713/713
(100 %)
7 diff
(99.1 %id)
AL534715 brain, fetal brain VPS72andTMOD4.d 607 to 1344 735 to 1   fully sequenced,   735/735
(100 %)
7 diff
(99.1 %id)
AL579076 T cells (Jurkat cell line), T cells from T cell leukemia VPS72andTMOD4.d 607 to 1160 682 to 129   fully sequenced,   554/682
(81 %)
1 diff
(99.9 %id)
AL578028 placenta VPS72andTMOD4.d 607 to 1327 724 to 1   fully sequenced,   724/724
(100 %)
9 diff
(98.8 %id)
BQ774265 Chondrosarcoma Grade II, Left Pelvis VPS72andTMOD4.d 617 to 1351 752 to 19   AAA   734/734
(100 %)
3 diff
(99.6 %id)
BM423730 amelanotic melanoma, cell line, skin VPS72andTMOD4.d 620 to 1351 1 to 732   AAA   732/732
(100 %)
0 diff
(100 %id)
BQ576043 Chondrosarcoma Grade II, Left Pelvis VPS72andTMOD4.d 621 to 1355 752 to 19   AAA   734/734
(100 %)
1 diff
(99.9 %id)
AA125813 uterus VPS72andTMOD4.d 622 to 982 1 to 370       370/448
(82 %)
12 diff
(97.4 %id)
CA312397 Human Lung Epithelial cells, lung VPS72andTMOD4.d 636 to 1355 738 to 19   AAA   720/720
(100 %)
0 diff
(100 %id)
AA608607 lung, lung carcinoma VPS72andTMOD4.d 637 to 1351 716 to 4       713/722
(98 %)
1 diff
(99.9 %id)
CD365909 Alveolar Macrophage, lung VPS72andTMOD4.d 637 to 1355 736 to 19   AAA   718/727
(98 %)
1 diff
(99.9 %id)
AI880013 brain, frontal lobe VPS72andTMOD4.d 638 to 1355 726 to 8       719/726
(99 %)
6 diff
(99.2 %id)
BF792062 adrenal cortex carcinoma, cell line, adrenal gland VPS72andTMOD4.d 638 to 915 1 to 279       279/279
(100 %)
1 diff
(99.7 %id)
BU628890 cell lines, Chondrosarcoma VPS72andTMOD4.d 638 to 1355 736 to 19   AAA   718/726
(98 %)
1 diff
(99.9 %id)
TI_159696659   VPS72andTMOD4.d 639 to 1351 796 to 89   AAA   708/961
(73 %)
17 diff
(98.3 %id)
CB305381 lung, Primary Lung Cystic Fibrosis EpithelialCells VPS72andTMOD4.d 640 to 1356 735 to 19   AAA   717/717
(100 %)
0 diff
(100 %id)
BQ006681 Chondrosarcoma, Left Pelvis VPS72andTMOD4.d 645 to 1351 724 to 19   AAA   706/710
(99 %)
8 diff
(98.9 %id)
AI884449 serous papillary carcinoma, high grade, 2pooled tumors, uterus VPS72andTMOD4.d 664 to 1355 717 to 33   AAA   685/685
(100 %)
26 diff
(96.3 %id)
AW157087 brain, frontal lobe VPS72andTMOD4.d 667 to 1353 696 to 10       687/696
(98 %)
1 diff
(99.9 %id)
BM976207 lung, Primary Lung Cystic Fibrosis EpithelialCells VPS72andTMOD4.d 672 to 1355 700 to 19   AAA   682/682
(100 %)
2 diff
(99.8 %id)
AI869954 anaplastic oligodendroglioma, brain VPS72andTMOD4.d 682 to 1355 673 to 2       672/675
(99 %)
9 diff
(98.7 %id)
CA432689 cell lines, Chondrosarcoma VPS72andTMOD4.d 683 to 1351 686 to 19   AAA   668/668
(100 %)
3 diff
(99.6 %id)
AI971667 pooled germ cell tumors VPS72andTMOD4.d 685 to 1351 665 to 1       665/665
(100 %)
8 diff
(98.8 %id)
BQ215141 large cell carcinoma, lung VPS72andTMOD4.d 693 to 1351 1 to 659   AAA   659/659
(100 %)
0 diff
(100 %id)
AA129425 brain, neuroepithelial cells VPS72andTMOD4.d 697 to 1280 598 to 1       598/598
(100 %)
19 diff
(96.9 %id)
CA945046 Human Lung Epithelial cells, lung VPS72andTMOD4.d 703 to 1351 666 to 19   AAA   648/652
(99 %)
2 diff
(99.7 %id)
W84830 liver and spleen VPS72andTMOD4.d 706 to 988 1 to 283   fully sequenced,   283/283
(100 %)
0 diff
(100 %id)
BQ305876 breast VPS72andTMOD4.d 713 to 1274 570 to 5       566/573
(98 %)
0 diff
(100 %id)
BQ305890 breast VPS72andTMOD4.d 713 to 1274 575 to 14       562/575
(97 %)
1 diff
(99.9 %id)
CB528336 Aveolar Macrophage, lung VPS72andTMOD4.d 716 to 1351 653 to 19   AAA   635/635
(100 %)
1 diff
(99.9 %id)
BQ305889 breast VPS72andTMOD4.d 720 to 1274 560 to 2       559/560
(99 %)
1 diff
(99.9 %id)
AW276063 lung, two pooled squamous cell carcinomas VPS72andTMOD4.d 733 to 1355 625 to 3       623/625
(99 %)
0 diff
(100 %id)
CD742674 Alveolar Macrophage, lung VPS72andTMOD4.d 741 to 1355 633 to 19   AAA   615/615
(100 %)
1 diff
(99.9 %id)
AA112131 muscle, skeletal muscle VPS72andTMOD4.d 744 to 1137 1 to 396       396/396
(100 %)
2 diff
(99.5 %id)
BM697514 eye, fetal eyes VPS72andTMOD4.d 744 to 1355 1 to 612   AAA   612/612
(100 %)
0 diff
(100 %id)
AW271248 Kidney VPS72andTMOD4.d 749 to 1355 693 to 87   AAA   607/608
(99 %)
17 diff
(97.3 %id)
BM707065 eye, eye anterior segment VPS72andTMOD4.d 752 to 1342 1 to 591   fully sequenced,   591/591
(100 %)
5 diff
(99.2 %id)
BF821150 kidney_tumor VPS72andTMOD4.d 766 to 1131 368 to 6     Submitted on the opposite strand 363/368
(98 %)
0 diff
(100 %id)
BQ774512 Chondrosarcoma Grade II, Left Pelvis VPS72andTMOD4.d 766 to 1355 608 to 19   AAA   590/590
(100 %)
0 diff
(100 %id)
CA424711 cell lines, Chondrosarcoma VPS72andTMOD4.d 766 to 1351 605 to 19   AAA   587/587
(100 %)
1 diff
(99.9 %id)
AW274917 pooled germ cell tumors VPS72andTMOD4.d 782 to 1355 586 to 13   AAA   574/581
(98 %)
1 diff
(99.9 %id)
AW572274 cervix VPS72andTMOD4.d 782 to 1351 571 to 2       570/581
(98 %)
0 diff
(100 %id)
AI692883 pooled VPS72andTMOD4.d 784 to 1323 580 to 41       540/580
(93 %)
0 diff
(100 %id)
AI809271 pooled VPS72andTMOD4.d 790 to 1355 566 to 1       566/566
(100 %)
4 diff
(99.3 %id)
BG939426 bone marrow stroma VPS72andTMOD4.d 795 to 1355 586 to 26   AAA   561/561
(100 %)
2 diff
(99.7 %id)
AW872788 squamous cell carcinoma, tongue VPS72andTMOD4.d 796 to 1357 568 to 7       562/568
(98 %)
0 diff
(100 %id)
AA574068 colon, tumor VPS72andTMOD4.d 797 to 1356 562 to 3       560/563
(99 %)
0 diff
(100 %id)
AA926886 pooled VPS72andTMOD4.d 803 to 1349 544 to 1       544/549
(99 %)
13 diff
(97.7 %id)
AA632315 breast VPS72andTMOD4.d 805 to 1353 558 to 12   AAA   547/547
(100 %)
12 diff
(97.9 %id)
AL524801 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized VPS72andTMOD4.d 817 to 1323 506 to 1       506/1058
(47 %)
17 diff
(98.4 %id)
BU598491 mixed (pool of 40 RNAs) VPS72andTMOD4.d 820 to 1352 1 to 539       539/966
(55 %)
12 diff
(98.8 %id)
AW262263 lung, two pooled squamous cell carcinomas VPS72andTMOD4.d 826 to 1351 526 to 1       526/526
(100 %)
34 diff
(93.6 %id)
AI248814 liver and spleen VPS72andTMOD4.d 834 to 1355 524 to 5       520/532
(97 %)
0 diff
(100 %id)
AI620377 poorly differentiated adenocarcinoma withsignet ring cell features, stomach VPS72andTMOD4.d 835 to 1351 516 to 2       515/516
(99 %)
0 diff
(100 %id)
CD106488 brain, Pituitary VPS72andTMOD4.d 838 to 1351 1 to 514       514/515
(99 %)
1 diff
(99.9 %id)
T79161 liver and spleen VPS72andTMOD4.d 843 to 1355 524 to 7       518/524
(98 %)
0 diff
(100 %id)
AI140479 liver and spleen VPS72andTMOD4.d 844 to 1355 510 to 1       510/510
(100 %)
40 diff
(92.2 %id)
BX370536   VPS72andTMOD4.d 849 to 1352 1 to 503       503/503
(100 %)
3 diff
(99.5 %id)
BG059713 brain, glioblastoma without EGFR amplification VPS72andTMOD4.d 849 to 1355 507 to 1       507/507
(100 %)
0 diff
(100 %id)
CA429904 Cell Line, Chondrosarcoma VPS72andTMOD4.d 851 to 1355 524 to 19   AAA   506/506
(100 %)
1 diff
(99.9 %id)
AW673527 cervix VPS72andTMOD4.d 856 to 1355 501 to 3       499/501
(99 %)
0 diff
(100 %id)
BQ356147 head_neck VPS72andTMOD4.d 858 to 1219 371 to 9       363/371
(97 %)
0 diff
(100 %id)
DB577649 hypothalamus VPS72andTMOD4.d 865 to 1351 1 to 487     Submitted on the opposite strand 487/487
(100 %)
1 diff
(99.8 %id)
AI580682 poorly differentiated adenocarcinoma withsignet ring cell features, stomach VPS72andTMOD4.d 866 to 1350 500 to 18   AAA   483/514
(93 %)
14 diff
(97.3 %id)
AI969421 adenocarcinoma, Pancreas VPS72andTMOD4.d 868 to 1351 485 to 1       485/485
(100 %)
2 diff
(99.6 %id)
BE207801 Kidney, renal cell adenocarcinoma VPS72andTMOD4.d 868 to 1350 493 to 12   AAA   482/482
(100 %)
15 diff
(96.9 %id)
CN480637 Cell Line, Chondrosarcoma VPS72andTMOD4.d 868 to 1351 503 to 19   AAA   485/485
(100 %)
1 diff
(99.8 %id)
CA429490 Cell Line, Chondrosarcoma VPS72andTMOD4.d 868 to 1351 503 to 19   AAA   485/485
(100 %)
1 diff
(99.8 %id)
DB540306 hippocampus VPS72andTMOD4.d 871 to 1352 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
BI253770 cervical carcinoma cell line, cervix VPS72andTMOD4.d 874 to 1351 1 to 477   AAA   477/477
(100 %)
1 diff
(99.8 %id)
AI190668 heart VPS72andTMOD4.d 880 to 1356 478 to 2       477/478
(99 %)
0 diff
(100 %id)
AI494373 anaplastic oligodendroglioma, brain VPS72andTMOD4.d 883 to 1356 475 to 2       474/475
(99 %)
0 diff
(100 %id)
AU309874 neuroblastoma VPS72andTMOD4.d 883 to 1355 518 to 46   AAA   473/473
(100 %)
0 diff
(100 %id)
BQ368764 placenta_normal VPS72andTMOD4.d 886 to 1240 352 to 1       352/352
(100 %)
5 diff
(98.6 %id)
AI804632 B-cell, chronic lymphotic leukemia VPS72andTMOD4.d 886 to 1351 477 to 12   AAA   466/466
(100 %)
9 diff
(98.1 %id)
AI089694 brain, glioblastoma (pooled) VPS72andTMOD4.d 889 to 1350 465 to 4       462/465
(99 %)
0 diff
(100 %id)
AI282272 Kidney, renal cell tumor VPS72andTMOD4.d 892 to 1355 470 to 7       464/470
(98 %)
0 diff
(100 %id)
AI524376 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus VPS72andTMOD4.d 892 to 1355 460 to 1       460/463
(99 %)
38 diff
(91.8 %id)
BE467588 carcinoid, lung VPS72andTMOD4.d 892 to 1355 466 to 3       464/466
(99 %)
0 diff
(100 %id)
DB544881 hippocampus VPS72andTMOD4.d 894 to 1351 1 to 458     Submitted on the opposite strand 458/458
(100 %)
7 diff
(98.5 %id)
AA705337 liver and spleen VPS72andTMOD4.d 895 to 1355 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AI750768 Bone, Hip VPS72andTMOD4.d 902 to 1323 434 to 13       422/434
(97 %)
0 diff
(100 %id)
AI368366 brain, glioblastoma (pooled) VPS72andTMOD4.d 904 to 1350 440 to 1       440/440
(100 %)
15 diff
(96.6 %id)
AA633685   VPS72andTMOD4.d 910 to 1324 415 to 1       415/424
(97 %)
5 diff
(98.9 %id)
AI591036 ovary, tumor, 5 pooled (see description) VPS72andTMOD4.d 910 to 1355 463 to 18   AAA   446/446
(100 %)
2 diff
(99.6 %id)
AW627620 2 pooled high-grade transitional celltumors, genitourinary tract VPS72andTMOD4.d 914 to 1355 442 to 1       442/446
(99 %)
5 diff
(98.9 %id)
AI350522 pooled germ cell tumors VPS72andTMOD4.d 917 to 1354 430 to 2       429/433
(99 %)
0 diff
(100 %id)
BE047004 pooled germ cell tumors VPS72andTMOD4.d 917 to 1355 445 to 7       439/445
(98 %)
0 diff
(100 %id)
DB563290 hypothalamus VPS72andTMOD4.d 918 to 1351 1 to 435     Submitted on the opposite strand 435/435
(100 %)
10 diff
(97.8 %id)
AW298441   VPS72andTMOD4.d 922 to 1356 452 to 18   AAA   435/435
(100 %)
0 diff
(100 %id)
BM673236 eye, eye anterior segment VPS72andTMOD4.d 940 to 1351 430 to 19   fully sequenced, AAA   412/412
(100 %)
0 diff
(100 %id)
N49210 multiple sclerosis lesions VPS72andTMOD4.d 943 to 1355 418 to 4       415/418
(99 %)
0 diff
(100 %id)
AA047675 heart VPS72andTMOD4.d 949 to 1356 412 to 1   fully sequenced,   412/412
(100 %)
6 diff
(98.6 %id)
BG236300 blood, lymphocyte VPS72andTMOD4.d 952 to 1355 406 to 2       405/406
(99 %)
0 diff
(100 %id)
W84783 liver and spleen VPS72andTMOD4.d 958 to 1355 401 to 1   fully sequenced,   401/401
(100 %)
7 diff
(98.3 %id)
BE931891 head_neck VPS72andTMOD4.d 979 to 1256 8 to 285       278/294
(94 %)
4 diff
(98.7 %id)
BF508023   VPS72andTMOD4.d 1016 to 1352 354 to 18   AAA   337/337
(100 %)
2 diff
(99.5 %id)
W69398 heart VPS72andTMOD4.d 1024 to 1351 337 to 4       334/337
(99 %)
0 diff
(100 %id)
BI257761 cervical carcinoma cell line, cervix VPS72andTMOD4.d 1025 to 1352 1 to 328   AAA   328/328
(100 %)
0 diff
(100 %id)
BP198275 adrenal gland VPS72andTMOD4.d 1028 to 1351 1 to 324   AAA   324/324
(100 %)
0 diff
(100 %id)
T32432 Spleen VPS72andTMOD4.d 1045 to 1355 311 to 1       311/311
(100 %)
2 diff
(99.4 %id)
TI_151735861   VPS72andTMOD4.d 1053 to 1181 225 to 97   fully sequenced, AAA   129/129
(100 %)
1 diff
(99.3 %id)
BQ368727 placenta_normal VPS72andTMOD4.d 1061 to 1248 203 to 11       193/212
(91 %)
16 diff
(92.5 %id)
BG272438 head/neck, nasopharyngeal carcinoma VPS72andTMOD4.d 1063 to 1351 294 to 6       289/322
(89 %)
0 diff
(100 %id)
BF093638 testis_normal VPS72andTMOD4.d 1075 to 1286 214 to 4       211/257
(82 %)
0 diff
(100 %id)
BX333807 Neuroblastoma Cot 50-normalized VPS72andTMOD4.d 1076 to 1355 1 to 280       280/280
(100 %)
1 diff
(99.7 %id)
AA128103 uterus VPS72andTMOD4.d 1084 to 1506 422 to 1   tiling clone,   422/425
(99 %)
3 diff
(99.3 %id)
Z38576 brain, total brain VPS72andTMOD4.d 1103 to 1355 253 to 1       253/253
(100 %)
0 diff
(100 %id)
NM_013353.2   VPS72andTMOD4.e 1 to 1322 1 to 1322 exact RefSeq,   1322/1322
(100 %)
0 diff
(100 %id)
DC385872 skeletal muscle VPS72andTMOD4.e 1 to 468 1 to 468   tiling clone,   468/468
(100 %)
0 diff
(100 %id)
DA896037 skeletal muscle VPS72andTMOD4.e 10 to 576 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AF177173 skeletal muscle; heart VPS72andTMOD4.e 56 to 1322 1 to 1267 exact tiling clone,   1267/1267
(100 %)
0 diff
(100 %id)
DA894102 skeletal muscle VPS72andTMOD4.e 73 to 587 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
AL599057   VPS72andTMOD4.e 90 to 417 1 to 328       328/328
(100 %)
1 diff
(99.7 %id)
BF575587 muscle (skeletal) VPS72andTMOD4.e 90 to 812 1 to 712       712/774
(91 %)
25 diff
(96.8 %id)
BC017810 skeletal muscle VPS72andTMOD4.e 91 to 1321 1 to 1231 C309R tiling clone, available from MGC, AAA   1231/1231
(100 %)
3 diff
(99.8 %id)
BP319286 pericardium VPS72andTMOD4.e 91 to 667 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
AK313280 skeletal muscle VPS72andTMOD4.e 92 to 1228 1 to 1137 F315L     1137/1137
(100 %)
3 diff
(99.8 %id)
DA892950 skeletal muscle VPS72andTMOD4.e 92 to 624 2 to 533   capped   532/533
(99 %)
2 diff
(99.7 %id)
DA893199 skeletal muscle VPS72andTMOD4.e 92 to 587 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA893259 skeletal muscle VPS72andTMOD4.e 92 to 562 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
DA893339 skeletal muscle VPS72andTMOD4.e 92 to 587 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA894121 skeletal muscle VPS72andTMOD4.e 92 to 647 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA894171 skeletal muscle VPS72andTMOD4.e 92 to 631 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA894644 skeletal muscle VPS72andTMOD4.e 92 to 656 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA894929 skeletal muscle VPS72andTMOD4.e 92 to 646 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA895038 skeletal muscle VPS72andTMOD4.e 92 to 636 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA895161 skeletal muscle VPS72andTMOD4.e 92 to 647 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA895539 skeletal muscle VPS72andTMOD4.e 92 to 652 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA895634 skeletal muscle VPS72andTMOD4.e 92 to 657 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA895959 skeletal muscle VPS72andTMOD4.e 92 to 629 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA896349 skeletal muscle VPS72andTMOD4.e 92 to 644 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA896945 skeletal muscle VPS72andTMOD4.e 92 to 652 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA897088 skeletal muscle VPS72andTMOD4.e 92 to 643 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA897159 skeletal muscle VPS72andTMOD4.e 92 to 656 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA897396 skeletal muscle VPS72andTMOD4.e 92 to 643 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA897842 skeletal muscle VPS72andTMOD4.e 92 to 649 2 to 559   capped   558/560
(99 %)
1 diff
(99.9 %id)
DA898622 skeletal muscle VPS72andTMOD4.e 92 to 654 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA898954 skeletal muscle VPS72andTMOD4.e 92 to 652 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA899153 skeletal muscle VPS72andTMOD4.e 92 to 534 2 to 444   capped   443/443
(100 %)
0 diff
(100 %id)
DA899735 skeletal muscle VPS72andTMOD4.e 92 to 640 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA899810 skeletal muscle VPS72andTMOD4.e 92 to 647 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA900285 skeletal muscle VPS72andTMOD4.e 92 to 587 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA893107 skeletal muscle VPS72andTMOD4.e 93 to 587 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA893171 skeletal muscle VPS72andTMOD4.e 93 to 587 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA893468 skeletal muscle VPS72andTMOD4.e 93 to 611 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA893809 skeletal muscle VPS72andTMOD4.e 93 to 587 2 to 495   capped   494/494
(100 %)
3 diff
(99.4 %id)
DA894605 skeletal muscle VPS72andTMOD4.e 93 to 587 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA897499 skeletal muscle VPS72andTMOD4.e 93 to 655 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA895607 skeletal muscle VPS72andTMOD4.e 94 to 638 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA897756 skeletal muscle VPS72andTMOD4.e 94 to 649 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BP319734 pericardium VPS72andTMOD4.e 96 to 676 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA892809 skeletal muscle VPS72andTMOD4.e 97 to 786 2 to 692   capped   691/691
(100 %)
2 diff
(99.8 %id)
DA893472 skeletal muscle VPS72andTMOD4.e 97 to 614 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA899406 skeletal muscle VPS72andTMOD4.e 97 to 652 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA899032 skeletal muscle VPS72andTMOD4.e 98 to 484 2 to 388   capped   387/387
(100 %)
1 diff
(99.8 %id)
BF825119 head_normal VPS72andTMOD4.e 99 to 506 1 to 408       408/408
(100 %)
11 diff
(97.4 %id)
DA894810 skeletal muscle VPS72andTMOD4.e 99 to 664 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA895419 skeletal muscle VPS72andTMOD4.e 99 to 587 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DA895048 skeletal muscle VPS72andTMOD4.e 100 to 649 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA898270 skeletal muscle VPS72andTMOD4.e 100 to 651 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA900316 skeletal muscle VPS72andTMOD4.e 103 to 594 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
BP265020 muscle VPS72andTMOD4.e 111 to 920 1 to 815       815/845
(96 %)
17 diff
(98.0 %id)
DA897255 skeletal muscle VPS72andTMOD4.e 113 to 681 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BP318073 pericardium VPS72andTMOD4.e 114 to 694 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA895552 skeletal muscle VPS72andTMOD4.e 121 to 689 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
AA194560 muscle, skeletal muscle VPS72andTMOD4.e 122 to 524 1 to 404       404/409
(98 %)
17 diff
(95.9 %id)
AF165217   VPS72andTMOD4.e 122 to 1321 1 to 1198 T283I AAA   1198/1198
(100 %)
3 diff
(99.8 %id)
AA192772 muscle, skeletal muscle VPS72andTMOD4.e 124 to 557 1 to 438       438/438
(100 %)
16 diff
(96.4 %id)
AA178988 muscle, skeletal muscle VPS72andTMOD4.e 127 to 456 1 to 332       332/332
(100 %)
10 diff
(97.0 %id)
AA194191 muscle, skeletal muscle VPS72andTMOD4.e 132 to 703 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
AA112785 muscle, skeletal muscle VPS72andTMOD4.e 148 to 560 20 to 437       417/437
(95 %)
12 diff
(97.3 %id)
TI_1948221444   VPS72andTMOD4.e 190 to 708 135 to 653   fully sequenced,   519/653
(79 %)
7 diff
(99.0 %id)
TI_1948221623   VPS72andTMOD4.e 190 to 618 135 to 563   fully sequenced,   429/563
(76 %)
7 diff
(98.8 %id)
TI_1948221797   VPS72andTMOD4.e 190 to 618 133 to 561   fully sequenced,   429/561
(76 %)
7 diff
(98.8 %id)
TI_1948221973   VPS72andTMOD4.e 190 to 618 133 to 561   fully sequenced, AAA   429/561
(76 %)
7 diff
(98.8 %id)
EL735437 mixed VPS72andTMOD4.e 191 to 791 1 to 601       601/603
(99 %)
7 diff
(98.9 %id)
AA194585 muscle, skeletal muscle VPS72andTMOD4.e 251 to 683 1 to 417       417/424
(98 %)
24 diff
(94.4 %id)
F00864 leg muscle, skeletal muscle VPS72andTMOD4.e 319 to 654 1 to 336       336/336
(100 %)
1 diff
(99.8 %id)
AA196675 muscle, skeletal muscle VPS72andTMOD4.e 448 to 940 1 to 497       492/497
(98 %)
16 diff
(96.8 %id)
BQ007623 Chondrosarcoma, Left Pelvis VPS72andTMOD4.e 551 to 1321 789 to 19   AAA   771/771
(100 %)
0 diff
(100 %id)
TI_1948221624   VPS72andTMOD4.e 557 to 1207 796 to 146   fully sequenced,   651/796
(81 %)
0 diff
(100 %id)
TI_1948221798   VPS72andTMOD4.e 557 to 1207 793 to 142   fully sequenced,   652/793
(82 %)
0 diff
(100 %id)
TI_1948221974   VPS72andTMOD4.e 557 to 1207 796 to 146   fully sequenced,   651/796
(81 %)
0 diff
(100 %id)
TI_1948221445   VPS72andTMOD4.e 647 to 1207 703 to 143   fully sequenced,   561/703
(79 %)
0 diff
(100 %id)
BQ359174 head_normal VPS72andTMOD4.e 657 to 1064 456 to 46       411/456
(90 %)
3 diff
(99.4 %id)
CA952419 Pancreas, Purified pancreatic islet VPS72andTMOD4.e 728 to 1320 593 to 1       593/593
(100 %)
3 diff
(99.5 %id)
AA196539 muscle, skeletal muscle VPS72andTMOD4.e 821 to 1291 471 to 1       471/471
(100 %)
0 diff
(100 %id)
F22011 pectoral muscle (after mastectomy) VPS72andTMOD4.e 844 to 1237 1 to 400       400/400
(100 %)
15 diff
(96.3 %id)
AJ572644 pectoral muscle (after mastectomy) VPS72andTMOD4.e 845 to 1217 14 to 384       371/384
(96 %)
12 diff
(96.9 %id)
F32580 pectoral muscle (after mastectomy) VPS72andTMOD4.e 851 to 1228 1 to 378       378/378
(100 %)
7 diff
(98.2 %id)
AA192191 muscle, skeletal muscle VPS72andTMOD4.e 853 to 1294 443 to 1       441/444
(99 %)
1 diff
(99.8 %id)
DB330737 skeletal muscle VPS72andTMOD4.e 853 to 1321 469 to 1       469/469
(100 %)
1 diff
(99.8 %id)
F21547 pectoral muscle (after mastectomy) VPS72andTMOD4.e 855 to 1315 1 to 463       463/463
(100 %)
11 diff
(97.7 %id)
AA194311 muscle, skeletal muscle VPS72andTMOD4.e 857 to 1321 494 to 30   AAA   465/465
(100 %)
0 diff
(100 %id)
F31003 pectoral muscle (after mastectomy) VPS72andTMOD4.e 858 to 1117 1 to 258       228/258
(88 %)
16 diff
(93.8 %id)
F35105 pectoral muscle (after mastectomy) VPS72andTMOD4.e 871 to 1193 8 to 329       322/329
(97 %)
7 diff
(97.9 %id)
F24485 pectoral muscle (after mastectomy) VPS72andTMOD4.e 882 to 1297 1 to 416       416/416
(100 %)
8 diff
(98.1 %id)
F30718 pectoral muscle (after mastectomy) VPS72andTMOD4.e 904 to 1207 1 to 304       304/311
(97 %)
5 diff
(98.4 %id)
AA625843 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus VPS72andTMOD4.e 905 to 1207 313 to 11       303/313
(96 %)
0 diff
(100 %id)
AA630954 normal prostate, Prostate VPS72andTMOD4.e 912 to 1321 411 to 1       411/416
(98 %)
9 diff
(97.9 %id)
AJ346783 pectoral muscle (after mastectomy) VPS72andTMOD4.e 915 to 1322 12 to 427       422/427
(98 %)
13 diff
(97.0 %id)
AI202283 Prostate VPS72andTMOD4.e 917 to 1321 406 to 1       406/611
(66 %)
11 diff
(98.2 %id)
F00795 leg muscle, skeletal muscle VPS72andTMOD4.e 930 to 1266 1 to 338       338/342
(98 %)
5 diff
(98.6 %id)
F25418 pectoral muscle (after mastectomy) VPS72andTMOD4.e 940 to 1275 1 to 336       336/336
(100 %)
0 diff
(100 %id)
AJ573096 pectoral muscle (after mastectomy) VPS72andTMOD4.e 961 to 1321 1 to 359   AAA   359/359
(100 %)
7 diff
(98.1 %id)
AJ573419 pectoral muscle (after mastectomy) VPS72andTMOD4.e 961 to 1321 1 to 362   AAA   362/362
(100 %)
2 diff
(99.5 %id)
AJ573420 pectoral muscle (after mastectomy) VPS72andTMOD4.e 965 to 1298 1 to 335       335/335
(100 %)
4 diff
(98.9 %id)
AJ572068 pectoral muscle (after mastectomy) VPS72andTMOD4.e 968 to 1320 1 to 354   AAA   354/354
(100 %)
1 diff
(99.8 %id)
F24657 pectoral muscle (after mastectomy) VPS72andTMOD4.e 969 to 1308 1 to 339       339/339
(100 %)
3 diff
(99.2 %id)
AA662387 normal prostate, Prostate VPS72andTMOD4.e 972 to 1274 303 to 1       303/303
(100 %)
0 diff
(100 %id)
F22078 pectoral muscle (after mastectomy) VPS72andTMOD4.e 973 to 1322 1 to 350       350/350
(100 %)
0 diff
(100 %id)
AJ346758 pectoral muscle (after mastectomy) VPS72andTMOD4.e 988 to 1320 1 to 335       335/345
(97 %)
8 diff
(97.7 %id)
AA197040 muscle, skeletal muscle VPS72andTMOD4.e 988 to 1321 1 to 336   fully sequenced,   336/336
(100 %)
5 diff
(98.6 %id)
AJ571907 pectoral muscle (after mastectomy) VPS72andTMOD4.e 989 to 1321 1 to 336   AAA   336/336
(100 %)
6 diff
(98.3 %id)
AJ346071 pectoral muscle (after mastectomy) VPS72andTMOD4.e 997 to 1320 1 to 327       327/331
(98 %)
4 diff
(98.8 %id)
F30690 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1000 to 1321 1 to 322       322/322
(100 %)
0 diff
(100 %id)
F36170 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1005 to 1308 1 to 304       304/304
(100 %)
0 diff
(100 %id)
AJ346743 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1008 to 1321 15 to 328   AAA   314/328
(95 %)
7 diff
(97.9 %id)
F33531 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1012 to 1307 1 to 296       296/296
(100 %)
3 diff
(99.0 %id)
F30017 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1013 to 1249 1 to 237       237/237
(100 %)
5 diff
(97.9 %id)
F00178 leg muscle, skeletal muscle VPS72andTMOD4.e 1024 to 1322 307 to 9       299/307
(97 %)
0 diff
(100 %id)
F20974 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1037 to 1322 1 to 289       289/289
(100 %)
6 diff
(98.0 %id)
F35790 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1050 to 1272 1 to 223       223/223
(100 %)
0 diff
(100 %id)
F18786 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1058 to 1322 1 to 266       266/266
(100 %)
1 diff
(99.7 %id)
F17696 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1059 to 1322 1 to 264       264/264
(100 %)
4 diff
(98.5 %id)
F26424 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1064 to 1322 1 to 259       259/267
(97 %)
1 diff
(99.7 %id)
F24907 pectoral muscle (after mastectomy) VPS72andTMOD4.e 1112 to 1319 1 to 208       208/208
(100 %)
0 diff
(100 %id)
AA197009 muscle, skeletal muscle VPS72andTMOD4.e 1175 to 1291 117 to 1   fully sequenced,   117/117
(100 %)
0 diff
(100 %id)
AK300675 skeletal muscle VPS72andTMOD4.f 1 to 1023 2 to 1024 exact tiling clone,   1024/1024
(100 %)
0 diff
(100 %id)
DC385647 skeletal muscle VPS72andTMOD4.f 1 to 549 2 to 550       550/550
(100 %)
0 diff
(100 %id)
DA897590 skeletal muscle VPS72andTMOD4.g 1 to 553 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA900034 skeletal muscle VPS72andTMOD4.g 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA895311 skeletal muscle VPS72andTMOD4.g 3 to 560 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BX501098 Liver VPS72andTMOD4.g 5 to 497 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DA897619 skeletal muscle VPS72andTMOD4.g 6 to 554 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BP319863 pericardium VPS72andTMOD4.g 308 to 890 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
BM476702 leiomyosarcoma, uterus VPS72andTMOD4.h -8 to 887 1 to 908 K143E Q144A V145G H146S K147* tiling clone,   908/1005
(90 %)
32 diff
(96.9 %id)
BG120391 adenocarcinoma, cell line, Liver VPS72andTMOD4.h 25 to 418 1 to 394   tiling clone,   394/394
(100 %)
0 diff
(100 %id)
DB471571 hippocampus VPS72andTMOD4.i 1 to 498 1 to 498       498/499
(99 %)
6 diff
(98.8 %id)
DA379565 thalamus VPS72andTMOD4.i 2 to 539 2 to 539   tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
BI754760 brain VPS72andTMOD4.i 2 to 551 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
TI_57217461   VPS72andTMOD4.i 2 to 811 33 to 843 I63D D64* tiling clone,   811/900
(90 %)
21 diff
(97.7 %id)
DA611390   VPS72andTMOD4.i 6 to 553 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
AA322345 brain, cerebellum VPS72andTMOD4.i 7 to 237 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
DA522794 brain VPS72andTMOD4.i 8 to 581 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
CB112918 Liver VPS72andTMOD4.i 8 to 151 1 to 144       144/144
(100 %)
5 diff
(96.6 %id)
DA921759 small intestine VPS72andTMOD4.i 8 to 576 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA325732 hippocampus VPS72andTMOD4.i 9 to 561 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB476060 hippocampus VPS72andTMOD4.i 9 to 497 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
BM748167 stomach VPS72andTMOD4.i 9 to 560 1 to 556       556/556
(100 %)
13 diff
(97.7 %id)
DB140636 thymus VPS72andTMOD4.i 9 to 557 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BP209598 cerebellum VPS72andTMOD4.i 11 to 590 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
CN295294 embryonic stem cells, DMSO-treated H9 cellline VPS72andTMOD4.i 14 to 592 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
BP353946   VPS72andTMOD4.i 15 to 601 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DB492323 hypothalamus VPS72andTMOD4.i 16 to 491 1 to 478       478/478
(100 %)
12 diff
(97.5 %id)
DB492889 hypothalamus VPS72andTMOD4.i 16 to 299 1 to 287       287/287
(100 %)
11 diff
(96.2 %id)
DB506350 hypothalamus VPS72andTMOD4.i 16 to 491 1 to 476       476/476
(100 %)
5 diff
(99.0 %id)
BM016760 astrocytoma grade IV, cell line, brain VPS72andTMOD4.i 17 to 597 1 to 584       584/584
(100 %)
4 diff
(99.4 %id)
TI_59386995   VPS72andTMOD4.i 17 to 597 113 to 696       584/584
(100 %)
4 diff
(99.4 %id)
AA312387   VPS72andTMOD4.i 21 to 350 1 to 330       330/330
(100 %)
2 diff
(99.4 %id)
CN295292 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 VPS72andTMOD4.i 21 to 613 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BI832559 pooled pancreas and spleen VPS72andTMOD4.i 21 to 551 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
BI822784 pooled brain, lung, testis VPS72andTMOD4.i 25 to 540 1 to 523       523/534
(97 %)
21 diff
(96.1 %id)
BI771271 pooled lung and spleen VPS72andTMOD4.i 25 to 551 1 to 527       527/527
(100 %)
0 diff
(100 %id)
CX754493 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass VPS72andTMOD4.i 26 to 620 1 to 595     Submitted on the opposite strand 595/754
(78 %)
71 diff
(90.6 %id)
BE299343 muscle, rhabdomyosarcoma VPS72andTMOD4.i 27 to 561 37 to 571       535/572
(93 %)
7 diff
(98.8 %id)
AA338410 brain VPS72andTMOD4.i 28 to 373 1 to 344       344/347
(99 %)
7 diff
(98.0 %id)
BI914399 brain VPS72andTMOD4.i 29 to 551 1 to 529       529/529
(100 %)
6 diff
(98.9 %id)
CA455431 adenocarcinoma, cell line, breast VPS72andTMOD4.i 29 to 565 272 to 814       543/884
(61 %)
15 diff
(98.4 %id)
CX869823 embryonic stem VPS72andTMOD4.i 30 to 593 1 to 564       564/564
(100 %)
0 diff
(100 %id)
BQ960959 carcinoma, cell line, Prostate VPS72andTMOD4.i 31 to 634 1 to 616       616/1043
(59 %)
20 diff
(98.1 %id)
BI917702 brain VPS72andTMOD4.i 32 to 551 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
BE893605 melanotic melanoma, skin VPS72andTMOD4.i 35 to 529 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BG419551 Kidney, renal cell adenocarcinoma VPS72andTMOD4.i 37 to 622 1 to 589       589/878
(67 %)
16 diff
(98.2 %id)
BG819984 anaplastic oligodendroglioma with 1p/19qloss, brain VPS72andTMOD4.i 39 to 549 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
DB057314 testis VPS72andTMOD4.i 39 to 577 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
CN295291 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 VPS72andTMOD4.i 40 to 614 1 to 575       575/575
(100 %)
5 diff
(99.2 %id)
BE264151.
matches multiple genes
lung, Lung, small cell carcinoma, small cell carcinoma VPS72andTMOD4.i 43 to 559 1 to 517   available from MGC, also hits gene WDR34 517/517
(100 %)
1 diff
(99.9 %id)
BP256187 Kidney VPS72andTMOD4.i 45 to 626 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
FN127224 breast carcinoma VPS72andTMOD4.i 46 to 166 122 to 4     Submitted on the opposite strand 119/122
(97 %)
0 diff
(100 %id)
CA395401 eye, RPE/choroid VPS72andTMOD4.i 50 to 491 1 to 442       442/442
(100 %)
7 diff
(98.5 %id)
BI260148 cervical carcinoma cell line, cervix VPS72andTMOD4.i 55 to 549 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
AA568389 colon, colon tumor RER+ VPS72andTMOD4.i 61 to 163 103 to 1       103/103
(100 %)
3 diff
(97.1 %id)
AI937654 anaplastic oligodendroglioma, brain VPS72andTMOD4.i 61 to 292 232 to 1       232/232
(100 %)
17 diff
(92.7 %id)
AI750769 Bone, Hip VPS72andTMOD4.i 65 to 372 9 to 316       308/316
(97 %)
0 diff
(100 %id)
CN295297 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells VPS72andTMOD4.i 67 to 487 1 to 421       421/421
(100 %)
0 diff
(100 %id)
AA933741 pooled germ cell tumors VPS72andTMOD4.i 74 to 292 220 to 1       220/220
(100 %)
8 diff
(96.4 %id)
BG256786 embryonal carcinoma, cell line, testis VPS72andTMOD4.i 75 to 623 1 to 559       559/1003
(55 %)
19 diff
(98.2 %id)
BQ305808 breast VPS72andTMOD4.i 126 to 622 9 to 513       505/519
(97 %)
27 diff
(94.8 %id)
BI768575 pooled lung and spleen VPS72andTMOD4.i 126 to 551 1 to 426       426/426
(100 %)
0 diff
(100 %id)
AA369622 placenta VPS72andTMOD4.i 137 to 398 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
AA325422 brain, cerebellum VPS72andTMOD4.i 142 to 442 1 to 301       301/302
(99 %)
3 diff
(99.1 %id)
BF825897 head_normal VPS72andTMOD4.i 151 to 457 315 to 9     Submitted on the opposite strand 307/315
(97 %)
1 diff
(99.7 %id)
CV339125 breast VPS72andTMOD4.i 160 to 453 1 to 300       300/311
(96 %)
26 diff
(91.7 %id)
BQ361204 ovary VPS72andTMOD4.i 164 to 483 12 to 332       321/332
(96 %)
7 diff
(97.9 %id)
R14932 whole brain VPS72andTMOD4.i 267 to 568 1 to 304       304/309
(98 %)
4 diff
(98.8 %id)
R76077 placenta VPS72andTMOD4.i 298 to 623 1 to 335       335/343
(97 %)
10 diff
(97.1 %id)
C15509   VPS72andTMOD4.i 328 to 607 1 to 280       280/280
(100 %)
2 diff
(99.3 %id)
FN047970 breast carcinoma VPS72andTMOD4.i 435 to 531 97 to 1     Submitted on the opposite strand 97/97
(100 %)
1 diff
(99.0 %id)
BE828052 lung_tumor VPS72andTMOD4.i 449 to 626 14 to 189       176/189
(93 %)
6 diff
(96.9 %id)
BE828051 lung_tumor VPS72andTMOD4.i 500 to 636 1 to 137       137/142
(96 %)
7 diff
(95.1 %id)
AK310045 small intestine VPS72andTMOD4.j 1 to 1013 1 to 1013 S95G D233G tiling clone,   1013/1013
(100 %)
2 diff
(99.9 %id)
AK297565 brain VPS72andTMOD4.j 13 to 1166 1 to 1155 D62G tiling clone,   1155/1155
(100 %)
5 diff
(99.6 %id)
AA504885   VPS72andTMOD4.j 649 to 1127 1 to 479     Submitted on the opposite strand 479/479
(100 %)
3 diff
(99.4 %id)
BG820312 anaplastic oligodendroglioma with 1p/19qloss, brain VPS72andTMOD4.j 836 to 1539 13 to 719       707/964
(73 %)
34 diff
(96.5 %id)
AA504937   VPS72andTMOD4.j 927 to 1308 382 to 1   tiling clone, Submitted on the opposite strand 382/382
(100 %)
0 diff
(100 %id)
CF455779 peripheral nervous system VPS72andTMOD4.j 1108 to 1844 35 to 769   tiling clone,   735/769
(95 %)
6 diff
(99.3 %id)
BQ324987 colon_ins VPS72andTMOD4.j 1625 to 2106 1 to 484   tiling clone,   484/485
(99 %)
10 diff
(98.0 %id)
DQ656047   VPS72andTMOD4.k 1 to 277 1 to 277   tiling clone,   277/277
(100 %)
0 diff
(100 %id)
BF914434 uterus_tumor VPS72andTMOD4.k 158 to 571 496 to 83   tiling clone, Submitted on the opposite strand 414/496
(83 %)
0 diff
(100 %id)
AW899554 nervous_normal VPS72andTMOD4.k 431 to 615 1 to 184       184/184
(100 %)
6 diff
(96.8 %id)
AW899308 nervous_normal VPS72andTMOD4.k 444 to 620 26 to 201   tiling clone,   176/215
(81 %)
2 diff
(99.1 %id)
AW899583 nervous_normal VPS72andTMOD4.k 448 to 610 165 to 3       163/165
(98 %)
0 diff
(100 %id)
BE700124 nervous_normal VPS72andTMOD4.k 448 to 620 189 to 16       174/189
(92 %)
0 diff
(100 %id)
BE700149 nervous_normal VPS72andTMOD4.k 448 to 614 171 to 3       169/171
(98 %)
0 diff
(100 %id)
BE700289 nervous_normal VPS72andTMOD4.k 448 to 620 185 to 14       172/185
(92 %)
0 diff
(100 %id)
BE699867 nervous_normal VPS72andTMOD4.k 449 to 615 1 to 167       167/167
(100 %)
2 diff
(98.9 %id)
BF308342 muscle, rhabdomyosarcoma VPS72andTMOD4.l 1 to 822 1 to 812 S2E L21W E22R A23Q E24R ... tiling clone,   812/847
(95 %)
33 diff
(96.2 %id)
AW074168 2 pooled high-grade transitional celltumors, genitourinary tract VPS72andTMOD4.l 506 to 1168 659 to 1   tiling clone,   659/661
(99 %)
27 diff
(96.0 %id)
BU631539 cell lines, Chondrosarcoma VPS72andTMOD4.l 579 to 1166 606 to 19   tiling clone, AAA   588/588
(100 %)
10 diff
(98.3 %id)
DW440719 Liver VPS72andTMOD4.m 1 to 375 9 to 384   tiling clone,   376/384
(97 %)
8 diff
(98.0 %id)
CN295293 embryonic stem cells, DMSO-treated H9 cellline VPS72andTMOD4.m 19 to 568 1 to 550   tiling clone,   550/550
(100 %)
0 diff
(100 %id)
AI763406 B-cell, chronic lymphotic leukemia VPS72andTMOD4.m 472 to 1023 551 to 1 exact tiling clone,   551/591
(93 %)
14 diff
(97.7 %id)
BF001297 Prostate VPS72andTMOD4.m 576 to 866 299 to 10       290/310
(93 %)
17 diff
(94.6 %id)
BE094761 breast VPS72andTMOD4.m 702 to 823 1 to 121       121/129
(93 %)
13 diff
(90.0 %id)
CB138787 Liver VPS72andTMOD4.n 1 to 420 1 to 420 exact tiling clone,   420/420
(100 %)
0 diff
(100 %id)
AK092700 skeletal muscle VPS72andTMOD4.o 1 to 1182 2 to 1183   tiling clone, available from FLJ,   1183/1183
(100 %)
0 diff
(100 %id)
AX747678   VPS72andTMOD4.o 1 to 1182 2 to 1183       1183/1183
(100 %)
0 diff
(100 %id)
DA898930 skeletal muscle VPS72andTMOD4.o 1 to 563 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
CU455977 epidermis VPS72andTMOD4.o 540 to 1131 684 to 93     Submitted on the opposite strand 592/684
(86 %)
0 diff
(100 %id)
DB331078 skeletal muscle VPS72andTMOD4.o 636 to 1182 548 to 1       548/548
(100 %)
1 diff
(99.9 %id)
CN304640 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells VPS72andTMOD4.p-u 1 to 589 1 to 589   tiling clone,   589/589
(100 %)
2 diff
(99.7 %id)
BM727067 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid VPS72andTMOD4.p-u 588 to 882 1 to 295   tiling clone,   295/295
(100 %)
0 diff
(100 %id)
CA428861 Bone, Subchondral Bone VPS72andTMOD4.p-u 856 to 1538 701 to 19   tiling clone, AAA   683/683
(100 %)
1 diff
(99.9 %id)
BU740909 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid VPS72andTMOD4.p-u 1042 to 1538 514 to 19   AAA   496/496
(100 %)
7 diff
(98.6 %id)
AA569071 liposarcoma VPS72andTMOD4.p-u 1146 to 1343 8 to 205       198/205
(96 %)
6 diff
(97.1 %id)
AA372203 muscle VPS72andTMOD4.q-u 1 to 239 1 to 239   tiling clone,   239/239
(100 %)
0 diff
(100 %id)
AW963408   VPS72andTMOD4.q-u 2 to 626 1 to 630 exact tiling clone,   630/631
(99 %)
28 diff
(95.6 %id)
AA584750 pheochromocytoma VPS72andTMOD4.q-u 189 to 525 336 to 1   tiling clone,   336/336
(100 %)
4 diff
(98.9 %id)
AI902909 breast VPS72andTMOD4.q-u 250 to 390 141 to 1   tiling clone,   141/141
(100 %)
0 diff
(100 %id)
F31490 pectoral muscle (after mastectomy) VPS72andTMOD4.r 1 to 128 1 to 128 N2E tiling clone,   128/128
(100 %)
2 diff
(98.5 %id)
AJ346165 pectoral muscle (after mastectomy) Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AK225130 cerebellum Gene VPS72andTMOD4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BX647346 Liver Gene VPS72andTMOD4, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
DB563973 hypothalamus Gene VPS72andTMOD4, variant not shown         Submitted on the opposite strand    
H83731 melanocyte Gene VPS72andTMOD4, variant not shown         This clone was ignored    
H83874 melanocyte Gene VPS72andTMOD4, variant not shown         This clone was ignored    
AA232507 brain, neuroepithelial cells Gene VPS72andTMOD4, variant not shown         This clone was ignored    
AA232606 brain, neuroepithelial cells Gene VPS72andTMOD4, variant not shown         This clone was ignored    
AA443950   Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AA444129   Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AA653180   Gene VPS72andTMOD4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI369608 anaplastic oligodendroglioma, brain Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AI366716 anaplastic oligodendroglioma, brain Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AI560960 anaplastic oligodendroglioma, brain Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
AI810811 Prostate Gene VPS72andTMOD4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AW005187 anaplastic oligodendroglioma, brain Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
BI761888 pooled colon, kidney, stomach Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
TI_57150944   Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
DA727780   Gene VPS72andTMOD4, variant not shown       capped Suspected internal deletion, suspected internal deletion, this clone was ignored    
CT003766 T-Lymphocytes Gene VPS72andTMOD4, variant not shown         Suspected internal deletion, this clone was ignored    
DA912060   Gene VPS72andTMOD4, variant not shown       capped This clone was ignored    
DB331437   Gene VPS72andTMOD4, variant not shown         This clone was ignored    
TI_149290963   Gene VPS72andTMOD4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q-u, .r Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI