To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene TCF7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
320 supporting clones for gene TCF7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC048769 Skin, melanotic melanoma. .a 1 to 3021 1 to 3021 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 3021/3021
(100 %)
5 diff
(99.9 %id)
NM_003202.3   .a 1 to 3277 1 to 3277 exact RefSeq,   3277/3277
(100 %)
0 diff
(100 %id)
BQ223073 melanotic melanoma, skin .a 2 to 634 1 to 634       634/909
(69 %)
2 diff
(99.8 %id)
CT002515 T-Lymphocytes .a 11 to 511 1 to 502       502/509
(98 %)
5 diff
(99.1 %id)
BU507878 leiomyosarcoma, uterus .a 17 to 750 1 to 734       730/1032
(70 %)
15 diff
(98.6 %id)
CR978297 T-Lymphocytes .a 19 to 382 1 to 364       364/365
(99 %)
2 diff
(99.5 %id)
CT002508 T-Lymphocytes .a 41 to 398 1 to 358       358/358
(100 %)
1 diff
(99.8 %id)
BC072023 Liver, hepatocellular carcinoma .a 66 to 3021 1 to 2956   available from MGC, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 2956/2956
(100 %)
4 diff
(99.9 %id)
BQ644366 hepatocellular carcinoma, cell line, Liver .a 66 to 635 10 to 581       572/1013
(56 %)
20 diff
(98.1 %id)
BQ653844 hepatocellular carcinoma, cell line, Liver .a 66 to 828 18 to 786       769/945
(81 %)
33 diff
(96.6 %id)
BM927748 hepatocellular carcinoma, cell line, Liver .a 67 to 748 1 to 685       685/1063
(64 %)
9 diff
(99.2 %id)
BM928554 hepatocellular carcinoma, cell line, Liver .a 67 to 442 1 to 376       376/1477
(25 %)
5 diff
(99.7 %id)
BM928801 hepatocellular carcinoma, cell line, Liver .a 67 to 645 1 to 579       579/1308
(44 %)
6 diff
(99.6 %id)
BQ645119 hepatocellular carcinoma, cell line, Liver .a 67 to 833 1 to 772       772/935
(82 %)
14 diff
(98.6 %id)
BQ650057 hepatocellular carcinoma, cell line, Liver .a 67 to 832 1 to 770       770/940
(81 %)
9 diff
(99.1 %id)
BQ645485 hepatocellular carcinoma, cell line, Liver .a 67 to 635 1 to 571       571/997
(57 %)
10 diff
(99.0 %id)
BQ650110 hepatocellular carcinoma, cell line, Liver .a 67 to 434 1 to 368       368/1183
(31 %)
10 diff
(99.2 %id)
BQ649862 hepatocellular carcinoma, cell line, Liver .a 67 to 645 1 to 581       581/1007
(57 %)
15 diff
(98.6 %id)
BQ646944 hepatocellular carcinoma, cell line, Liver .a 67 to 513 1 to 447       447/1120
(39 %)
5 diff
(99.6 %id)
BQ650220 hepatocellular carcinoma, cell line, Liver .a 67 to 638 1 to 573       573/1118
(51 %)
4 diff
(99.7 %id)
BQ644023 hepatocellular carcinoma, cell line, Liver .a 67 to 645 1 to 582       582/1036
(56 %)
9 diff
(99.2 %id)
BQ650521 hepatocellular carcinoma, cell line, Liver .a 67 to 554 1 to 494       494/1200
(41 %)
12 diff
(99.0 %id)
BQ653991 hepatocellular carcinoma, cell line, Liver .a 67 to 832 1 to 778       778/960
(81 %)
17 diff
(98.3 %id)
BQ651010 hepatocellular carcinoma, cell line, Liver .a 67 to 832 1 to 770       770/948
(81 %)
16 diff
(98.4 %id)
BQ651211 hepatocellular carcinoma, cell line, Liver .a 67 to 694 1 to 631       631/911
(69 %)
13 diff
(98.6 %id)
BQ652630 hepatocellular carcinoma, cell line, Liver .a 67 to 633 1 to 571       571/1045
(54 %)
17 diff
(98.4 %id)
BQ644053 hepatocellular carcinoma, cell line, Liver .a 75 to 638 1 to 564       564/925
(60 %)
7 diff
(99.3 %id)
BQ647569 hepatocellular carcinoma, cell line, Liver .a 80 to 645 1 to 571       571/898
(63 %)
8 diff
(99.2 %id)
CR991678 T-Lymphocytes .a 263 to 658 1 to 396       396/396
(100 %)
0 diff
(100 %id)
CR991644 T-Lymphocytes .a 263 to 894 1 to 632       632/632
(100 %)
0 diff
(100 %id)
CR976009 T-Lymphocytes .a 263 to 671 1 to 409       409/409
(100 %)
0 diff
(100 %id)
CT004461 T-Lymphocytes .a 263 to 704 1 to 442       442/442
(100 %)
0 diff
(100 %id)
AL832816 lymph node .a 285 to 3021 1 to 2740   available from DKFZ, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 2740/2740
(100 %)
4 diff
(99.9 %id)
BG386035 adenocarcinoma cell line, colon .a 341 to 622 1 to 282       282/353
(79 %)
2 diff
(99.5 %id)
AA311787   .a 457 to 729 1 to 273       273/273
(100 %)
0 diff
(100 %id)
AA206279   .a 639 to 977 28 to 368       341/368
(92 %)
10 diff
(97.3 %id)
DA598410   .a 651 to 1210 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB124600 thymus .a 683 to 1253 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB124695 thymus .a 683 to 1222 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB159798 thymus .a 684 to 1281 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DA945368 Spleen .a 690 to 1253 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BM689114 eye, optic nerve .a 760 to 1100 5 to 345       341/345
(98 %)
6 diff
(98.3 %id)
DB118894 thymus .a 773 to 1331 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AA312350   .a 830 to 1165 1 to 339       337/339
(99 %)
3 diff
(99.2 %id)
DB128441 thymus .a 847 to 1406 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA813652   .a 857 to 1371 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
CR985196 T-Lymphocytes .a 865 to 1758 17 to 914       898/914
(98 %)
8 diff
(99.2 %id)
DB102110 thymus .a 867 to 1415 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AA309508   .a 885 to 1158 1 to 274       274/274
(100 %)
0 diff
(100 %id)
DB106987 thymus .a 916 to 1485 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CT001705 T-Lymphocytes .a 925 to 1756 1 to 833       833/833
(100 %)
2 diff
(99.8 %id)
BE694532 breast .a 964 to 1344 384 to 4       381/385
(98 %)
6 diff
(98.5 %id)
AA355149   .a 976 to 1329 1 to 353       353/353
(100 %)
4 diff
(98.9 %id)
DA826685 pericardium .a 991 to 1554 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB130149 thymus .a 1025 to 1597 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB115372 thymus .a 1074 to 1343 2 to 271   capped   270/270
(100 %)
0 diff
(100 %id)
BM550544 melanotic melanoma, skin .a 1115 to 2149 1 to 1040       1040/1084
(95 %)
24 diff
(97.8 %id)
AA410240 ovarian tumor, ovary .a 1137 to 1425 1 to 289   fully sequenced,   289/289
(100 %)
5 diff
(98.3 %id)
AA480071 ovarian tumor, ovary .a 1137 to 1648 1 to 512   fully sequenced,   512/512
(100 %)
7 diff
(98.7 %id)
CR986770 T-Lymphocytes .a 1206 to 2143 1 to 938       938/938
(100 %)
1 diff
(99.9 %id)
BF109944 pooled .a 1266 to 1801 536 to 1       536/627
(85 %)
7 diff
(98.9 %id)
BU621218 cell lines, Chondrosarcoma .a 1270 to 1805 555 to 19   AAA   537/540
(99 %)
3 diff
(99.5 %id)
AI660365 thymus, pooled .a 1281 to 1802 528 to 8       521/528
(98 %)
0 diff
(100 %id)
BP366590 thymus .a 1284 to 1857 1 to 573       573/573
(100 %)
5 diff
(99.2 %id)
AA319339 adrenal gland .a 1285 to 1463 1 to 179       179/179
(100 %)
0 diff
(100 %id)
AA337302 endometrium .a 1285 to 1526 1 to 243       243/243
(100 %)
1 diff
(99.6 %id)
BI088702 cervix .a 1346 to 2021 1 to 680       680/724
(93 %)
15 diff
(98.0 %id)
AA310403   .a 1386 to 1685 1 to 299       299/299
(100 %)
1 diff
(99.7 %id)
AA436332 ovarian tumor, ovary .a 1395 to 1801 407 to 1   fully sequenced,   407/407
(100 %)
2 diff
(99.6 %id)
DA374909 thalamus .a 1421 to 1977 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
AA206280   .a 1421 to 1806 387 to 2       386/387
(99 %)
0 diff
(100 %id)
AW192377 adenocarcinoma, Pancreas .a 1428 to 1802 374 to 1       374/374
(100 %)
3 diff
(99.2 %id)
AA336095 epididymis .a 1430 to 1675 1 to 245       245/245
(100 %)
1 diff
(99.6 %id)
CT001130 T-Lymphocytes .a 1469 to 2202 1 to 733       733/733
(100 %)
2 diff
(99.8 %id)
AI457956 pooled .a 1470 to 1802 335 to 3       333/335
(99 %)
0 diff
(100 %id)
BU727348 eye, optic nerve .a 1496 to 1805 328 to 19   AAA   310/310
(100 %)
2 diff
(99.4 %id)
BP368616 thymus .a 1526 to 2106 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BX437755 thymus .a 1570 to 2402 1 to 836       836/836
(100 %)
5 diff
(99.5 %id)
AA481988 ovarian tumor, ovary .a 1618 to 1804 187 to 1   fully sequenced,   187/187
(100 %)
3 diff
(98.4 %id)
BQ897173 dorsal root ganglia .a 1618 to 2436 1 to 828       828/884
(93 %)
17 diff
(98.1 %id)
CR592040 thymus .a 1654 to 2999 1 to 1346   tiling clone,   1346/1346
(100 %)
0 diff
(100 %id)
BX437231 thymus .a 1654 to 2416 1 to 764   fully sequenced,   764/764
(100 %)
3 diff
(99.7 %id)
BP367627 thymus .a 1659 to 2240 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE083417 breast .a 1713 to 1950 240 to 3     Submitted on the opposite strand 238/245
(97 %)
0 diff
(100 %id)
BM762799 lymph node, stomach .a 1781 to 2458 1 to 680       680/680
(100 %)
2 diff
(99.8 %id)
BM762711 lymph node, stomach .a 1781 to 2499 1 to 718       718/718
(100 %)
1 diff
(99.9 %id)
BM761617 lymph node, stomach .a 1781 to 2374 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM844333 lymph node, stomach .a 1781 to 2018 1 to 238       238/238
(100 %)
0 diff
(100 %id)
BM842363 lymph node, stomach .a 1781 to 2231 1 to 452       452/452
(100 %)
2 diff
(99.6 %id)
BM842846 lymph node, stomach .a 1781 to 2327 1 to 546       546/546
(100 %)
10 diff
(98.2 %id)
BM851321 lymph node, stomach .a 1781 to 2232 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BM845721 lymph node, stomach .a 1781 to 2269 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BI083868 epidermoid carcinoma, cell line, salivary gland .a 1785 to 2471 1 to 701   fully sequenced,   701/701
(100 %)
22 diff
(96.9 %id)
BM845423 lymph node, stomach .a 1804 to 2295 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
AW408491 lymph .a 1834 to 2296 8 to 470       463/470
(98 %)
11 diff
(97.7 %id)
TI_154148088   .a 1834 to 2406 86 to 658       573/673
(85 %)
10 diff
(98.6 %id)
AW401779 lymph .a 1844 to 2434 1 to 591       591/591
(100 %)
5 diff
(99.2 %id)
TI_154137921   .a 1851 to 2653 80 to 874   AAA   795/818
(97 %)
21 diff
(97.5 %id)
AA355648   .a 1855 to 2048 1 to 194       194/194
(100 %)
2 diff
(99.0 %id)
BM558017 duodenal adenocarcinoma, cell line, small intestine .a 1885 to 2793 1 to 920       920/1003
(91 %)
20 diff
(98.1 %id)
BF829481 head_normal .a 1907 to 2140 233 to 1     Submitted on the opposite strand 233/233
(100 %)
7 diff
(97.0 %id)
BM741126 Ascites, stomach .a 1918 to 2476 1 to 559       559/559
(100 %)
0 diff
(100 %id)
BF792155 adrenal cortex carcinoma, cell line, adrenal gland .a 1929 to 2726 1 to 801       801/803
(99 %)
19 diff
(97.7 %id)
AA313134 colon .a 1947 to 2458 1 to 512       512/512
(100 %)
0 diff
(100 %id)
AW950146   .a 1948 to 2256 1 to 309       309/454
(68 %)
1 diff
(99.8 %id)
BP367858 thymus .a 2024 to 2588 1 to 564       564/564
(100 %)
5 diff
(99.2 %id)
BP430060   .a 2055 to 2409 1 to 355       355/355
(100 %)
4 diff
(98.9 %id)
BP431134   .a 2056 to 2457 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
AW175893 breast .a 2150 to 2333 185 to 1       185/189
(97 %)
8 diff
(95.8 %id)
AW175899 breast .a 2150 to 2329 179 to 1       179/189
(94 %)
4 diff
(97.9 %id)
AW351460 breast .a 2150 to 2361 212 to 1       212/222
(95 %)
5 diff
(97.8 %id)
AW748049 breast .a 2150 to 2314 166 to 2       165/176
(93 %)
0 diff
(100 %id)
BM791800 stomach .a 2181 to 2876 1 to 696       696/696
(100 %)
1 diff
(99.9 %id)
BM757253 Ascites, stomach .a 2217 to 2822 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
TI_154124231   .a 2218 to 3021 891 to 98   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 794/946
(83 %)
12 diff
(98.8 %id)
BQ653350 hepatocellular carcinoma, cell line, Liver .a 2222 to 3049 11 to 839       829/905
(91 %)
20 diff
(97.8 %id)
BM695321 eye, optic nerve .a 2227 to 2900 1 to 675       675/675
(100 %)
3 diff
(99.6 %id)
BP428584   .a 2271 to 2672 1 to 402       402/402
(100 %)
6 diff
(98.6 %id)
BP431270   .a 2271 to 2598 1 to 328       328/328
(100 %)
6 diff
(98.2 %id)
T68617 Liver .a 2296 to 2614 1 to 333   fully sequenced,   333/333
(100 %)
11 diff
(96.7 %id)
TI_154102709   .a 2315 to 3258 1032 to 101   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 932/973
(95 %)
23 diff
(97.7 %id)
AA353991   .a 2360 to 2588 1 to 229       229/229
(100 %)
2 diff
(99.2 %id)
BX415364 thymus .a 2386 to 2999 613 to 1   fully sequenced,   613/613
(100 %)
1 diff
(99.9 %id)
CA435336 lung, Metastatic Chondrosarcoma .a 2398 to 3039 642 to 1       642/642
(100 %)
3 diff
(99.6 %id)
BU617467 Bone, Subchondral Bone .a 2412 to 3039 628 to 1       628/628
(100 %)
2 diff
(99.7 %id)
R48486 breast .a 2425 to 2764 1 to 357   fully sequenced,   357/357
(100 %)
10 diff
(97.2 %id)
BP431137   .a 2428 to 2790 1 to 363       363/363
(100 %)
6 diff
(98.4 %id)
BI084540 epidermoid carcinoma, cell line, salivary gland .a 2441 to 2945 530 to 24   fully sequenced,   507/530
(95 %)
25 diff
(95.3 %id)
T28506 Kidney .a 2453 to 2723 1 to 272     Submitted on the opposite strand 272/272
(100 %)
1 diff
(99.7 %id)
BF912800 uterus_tumor .a 2465 to 2645 1 to 181       181/181
(100 %)
0 diff
(100 %id)
AA364217 pineal body .a 2466 to 2647 1 to 182       182/182
(100 %)
1 diff
(99.5 %id)
AW951230   .a 2467 to 2969 1 to 510       510/558
(91 %)
22 diff
(96.1 %id)
BX414825 thymus .a 2529 to 3021 1 to 492   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 492/492
(100 %)
3 diff
(99.4 %id)
TI_151702109   .a 2529 to 3258 842 to 118       725/1042
(69 %)
0 diff
(100 %id)
BP431393   .a 2534 to 2867 1 to 334       334/334
(100 %)
0 diff
(100 %id)
DB540439 hippocampus .a 2544 to 3021 1 to 478     Submitted on the opposite strand 478/478
(100 %)
0 diff
(100 %id)
CA445662 Chondrosarcoma, Left Pubic Bone .a 2583 to 3258 696 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 678/678
(100 %)
2 diff
(99.8 %id)
T68541 Liver .a 2584 to 3023 441 to 4   fully sequenced,   438/441
(99 %)
11 diff
(97.6 %id)
AI880889 aorta .a 2588 to 3024 437 to 1       437/437
(100 %)
7 diff
(98.4 %id)
BX280629 melanotic melanoma, skin .a 2595 to 3100 1 to 506       506/506
(100 %)
3 diff
(99.5 %id)
BM453978 melanotic melanoma, skin .a 2595 to 3258 1 to 664   tiling clone,   664/687
(96 %)
4 diff
(99.5 %id)
AI246192 follicular lymphoma, lymph node .a 2622 to 3026 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
AI805261 B-cell, chronic lymphotic leukemia .a 2630 to 3022 393 to 1       393/393
(100 %)
0 diff
(100 %id)
AI865980 adenocarcinoma, Pancreas .a 2676 to 3022 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
AI539024 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2692 to 3021 330 to 1       330/330
(100 %)
2 diff
(99.4 %id)
R73639 breast .a 2703 to 2976 274 to 1       274/283
(96 %)
4 diff
(98.6 %id)
AV706891 adrenal gland .a 2728 to 3021 1 to 294   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 294/294
(100 %)
0 diff
(100 %id)
AV707794 adrenal gland .a 2728 to 3021 1 to 294   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 294/294
(100 %)
1 diff
(99.7 %id)
R48487 breast .a 2734 to 3021 302 to 1   fully sequenced,   302/302
(100 %)
11 diff
(96.4 %id)
BE246528 leukopheresis .a 2910 to 3258 347 to 1       347/347
(100 %)
8 diff
(97.7 %id)
BE245974 leukopheresis .a 2948 to 3258 310 to 1       310/310
(100 %)
6 diff
(98.1 %id)
BE046946 pooled germ cell tumors .a 3039 to 3258 234 to 16       219/234
(93 %)
0 diff
(100 %id)
T25455   .a 3075 to 3231 158 to 5       154/158
(97 %)
0 diff
(100 %id)
CR992185 T-Lymphocytes .b 1 to 797 1 to 797   tiling clone,   797/799
(99 %)
2 diff
(99.8 %id)
DN998094 breast cancer, Mammary gland (cancer tissue) .b 300 to 838 9 to 548       540/548
(98 %)
7 diff
(98.8 %id)
CR976030 T-Lymphocytes .b 305 to 1043 1 to 739       739/739
(100 %)
0 diff
(100 %id)
BG327699 Kidney, renal cell adenocarcinoma .b 574 to 1208 1 to 645       645/857
(75 %)
37 diff
(95.7 %id)
DA818326   .b 580 to 1143 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB163254 thymus .b 583 to 1177 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB116718 thymus .b 699 to 1241 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
DW009959 pooled .b 978 to 1407 430 to 1       430/430
(100 %)
5 diff
(98.9 %id)
TI_1065986814   .b 992 to 1475 6 to 490   tiling clone,   485/490
(98 %)
8 diff
(98.4 %id)
DW009958 pooled .b 1005 to 1463 1 to 459       459/459
(100 %)
5 diff
(99.0 %id)
DB145426 thymus .c 1 to 538 2 to 539   tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
DB116071 thymus .c 27 to 557 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DB102048 thymus .c 46 to 595 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DB109160 thymus .c 48 to 619 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
Z47362 lymphoma .c 96 to 1261 1 to 1165 P325R A326H P327L T328H S329P ... tiling clone,   1165/1165
(100 %)
2 diff
(99.9 %id)
DB122936 thymus .c 417 to 936 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
CN274310 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 775 to 1510 1 to 736   tiling clone,   736/736
(100 %)
2 diff
(99.8 %id)
DB156425 thymus .d 1 to 566 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DB142546 thymus .d 55 to 593 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB136774 thymus .d 65 to 555 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DB103105 thymus .d 66 to 621 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB143652 thymus .d 78 to 555 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
DA943126 Spleen .d 89 to 671 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB164785 thymus .d 90 to 680 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DB126005 thymus .d 147 to 690 2 to 545   tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
BX426109 T cells (Jurkat cell line) .d 563 to 1428 873 to 10   tiling clone,   866/1110
(78 %)
26 diff
(97.7 %id)
BP333307 salivary gland .e 1 to 584 1 to 584   tiling clone,   584/584
(100 %)
2 diff
(99.7 %id)
Z47361 lymphoma .e 216 to 1331 1 to 1115   tiling clone,   1115/1115
(100 %)
2 diff
(99.9 %id)
DB121236 thymus .e 425 to 986 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
CN274309 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 600 to 1351 1 to 753       753/753
(100 %)
1 diff
(99.9 %id)
CT002552 T-Lymphocytes .e 619 to 1024 5 to 416       412/424
(97 %)
8 diff
(98.2 %id)
AW027359 thymus, pooled .e 786 to 1503 716 to 1   tiling clone,   716/826
(86 %)
17 diff
(98.0 %id)
DB114311 thymus .e 904 to 1464 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
NM_201632.3   .f 1 to 2839 1 to 2839 exact RefSeq,   2839/2839
(100 %)
5 diff
(99.9 %id)
X59870   .f 19 to 2833 1 to 2808 exact tiling clone,   2808/2814
(99 %)
18 diff
(99.4 %id)
NM_001134851.2   .g 1 to 3322 1 to 3322 exact RefSeq,   3322/3322
(100 %)
5 diff
(99.9 %id)
DB103880 thymus .g 1 to 550 2 to 551   tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DA627229 Kidney .g 2 to 542 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB106996 thymus .g 4 to 568 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB119721 thymus .g 5 to 565 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB150088 thymus .g 5 to 578 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB161160 thymus .g 5 to 579 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB153279 thymus .g 7 to 579 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB127128 thymus .g 12 to 480 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
X59869   .g 19 to 1272 1 to 1254 exact tiling clone,   1254/1254
(100 %)
3 diff
(99.8 %id)
DA816705   .g 29 to 594 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB127975 thymus .g 1036 to 1594 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DB112372 thymus .g 1242 to 1817 2 to 577   tiling clone, capped   576/576
(100 %)
1 diff
(99.9 %id)
NM_213648.3   .h 1 to 3073 1 to 3073   RefSeq,   3073/3073
(100 %)
5 diff
(99.9 %id)
DB137814 thymus .h 5 to 564 2 to 563   tiling clone, capped   560/562
(99 %)
7 diff
(98.8 %id)
DB161326 thymus .h 5 to 578 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB162010 thymus .h 36 to 609 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB109571 thymus .h 54 to 635 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DB163243 thymus .h 55 to 636 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB129742 thymus .h 57 to 621 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DB149759 thymus .h 57 to 586 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DB152864 thymus .h 57 to 639 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB156613 thymus .h 57 to 660 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DB158386 thymus .h 60 to 603 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB141716 thymus .h 61 to 286 2 to 228   capped   227/227
(100 %)
1 diff
(99.6 %id)
DB135534 thymus .h 70 to 633 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB145451 thymus .h 78 to 326 2 to 250   capped   249/249
(100 %)
0 diff
(100 %id)
CR985143 T-Lymphocytes .h 103 to 838 1 to 737       737/737
(100 %)
6 diff
(99.2 %id)
AK093530 thymus .h 130 to 2811 1 to 2682   tiling clone, available from FLJ,   2682/2682
(100 %)
3 diff
(99.9 %id)
DB101559 thymus .h 131 to 678 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB117940 thymus .h 131 to 575 2 to 446   capped   445/445
(100 %)
0 diff
(100 %id)
DB123489 thymus .h 131 to 600 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DB153790 thymus .h 131 to 705 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB142371 thymus .h 136 to 674 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB157798 thymus .h 141 to 714 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB137100 thymus .h 146 to 686 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB101214 thymus .h 147 to 673 2 to 530   capped   529/531
(99 %)
7 diff
(98.7 %id)
DB121819 thymus .h 168 to 687 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DB130558 thymus .h 168 to 718 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB133993 thymus .h 177 to 712 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB164970 thymus .h 182 to 706 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DB342452 thymus .h 2251 to 2811 561 to 1       561/563
(99 %)
2 diff
(99.7 %id)
DB342408 thymus .h 2316 to 2811 496 to 1   tiling clone,   496/496
(100 %)
0 diff
(100 %id)
NM_201634.3   .i 1 to 2935 1 to 2935 exact RefSeq,   2935/2935
(100 %)
5 diff
(99.9 %id)
X59871   .i 19 to 2929 1 to 2904 exact tiling clone,   2904/2910
(99 %)
18 diff
(99.4 %id)
AL834166 lymph node .j 1 to 5330 1 to 5330 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 5330/5330
(100 %)
3 diff
(100.0 %id)
CR977475 T-Lymphocytes .j 691 to 949 16 to 278       263/295
(89 %)
5 diff
(98.4 %id)
DB154750 thymus .j 1122 to 1709 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB145501 thymus .j 1173 to 1645 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DB132529 thymus .j 1313 to 1844 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB148652 thymus .j 1318 to 1881 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB160617 thymus .j 1344 to 1935 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
DB122424 thymus .j 1538 to 2111 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB160130 thymus .j 1546 to 2096 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB103935 thymus .j 1978 to 2531 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB149238 thymus .j 2049 to 2544 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
CV366789 amnion_normal .j 2098 to 2433 339 to 1     Submitted on the opposite strand 339/360
(94 %)
23 diff
(93.7 %id)
BF734483 amnion_normal .j 2107 to 2433 332 to 4     Submitted on the opposite strand 329/332
(99 %)
0 diff
(100 %id)
AA021287 eye, retina .j 2131 to 2552 1 to 430       430/430
(100 %)
8 diff
(98.2 %id)
DB139676 thymus .j 2173 to 2679 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DB156350 thymus .j 2173 to 2749 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB132502 thymus .j 2188 to 2705 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DB117967 thymus .j 2367 to 2906 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB150733 thymus .j 2370 to 2848 2 to 480   capped   479/479
(100 %)
0 diff
(100 %id)
DB155297 thymus .j 2497 to 3074 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA955790 Spleen .j 2505 to 3072 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB127559 thymus .j 2654 to 3195 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB118490 thymus .j 2679 to 3241 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB110355 thymus .j 2803 to 3365 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB108298 thymus .j 2869 to 3443 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CT003224 T-Lymphocytes .j 3050 to 3857 1 to 810       810/813
(99 %)
3 diff
(99.7 %id)
DB344728 thymus .j 4778 to 5330 554 to 1       554/554
(100 %)
1 diff
(99.9 %id)
DB342696 thymus .j 4883 to 5330 451 to 1       451/472
(95 %)
5 diff
(99.0 %id)
AA021189 eye, retina .j 4990 to 5336 352 to 1       352/382
(92 %)
11 diff
(97.2 %id)
AK310591 thymus .k 1 to 1498 2 to 1499 exact tiling clone,   1499/1499
(100 %)
3 diff
(99.8 %id)
DB119874 thymus .k 1 to 546 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
CR988149 T-Lymphocytes .l 1 to 698 1 to 698 E16G Q193X S201X R203X E204X ... tiling clone,   698/699
(99 %)
2 diff
(99.8 %id)
DA988460 synovial membrane tissue from rheumatioidarthritis .m 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DB118463 thymus .m 4 to 569 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CT003626 T-Lymphocytes .m 520 to 1462 1 to 942   tiling clone,   942/942
(100 %)
7 diff
(99.3 %id)
Z47363 lymphoma .m 906 to 1089 1 to 184       184/184
(100 %)
0 diff
(100 %id)
AK093683 thymus .n 1 to 1964 2 to 1965 exact tiling clone, available from FLJ,   1965/1965
(100 %)
3 diff
(99.9 %id)
AX748258   .n 1 to 1964 2 to 1965 exact     1965/1965
(100 %)
3 diff
(99.9 %id)
DB106420 thymus .n 1 to 550 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
BX491619   .n 169 to 758 1 to 590   tiling clone,   590/590
(100 %)
4 diff
(99.4 %id)
BF370173 prostate_normal .n 292 to 634 1 to 343   tiling clone,   343/343
(100 %)
2 diff
(99.5 %id)
BE006183 breast_normal .n 446 to 551 122 to 14     Submitted on the opposite strand 109/124
(87 %)
0 diff
(100 %id)
DB342949 thymus .n 1384 to 1964 581 to 1       581/581
(100 %)
0 diff
(100 %id)
DB143735 thymus .o 1 to 526 2 to 527   tiling clone, capped   526/526
(100 %)
0 diff
(100 %id)
AK131428 Spleen .o 494 to 3859 1 to 3366 exact tiling clone, available from FLJ,   3366/3366
(100 %)
3 diff
(100.0 %id)
DA934077 Spleen .o 495 to 1091 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
DB151404 thymus .o 558 to 1079 2 to 523   tiling clone, capped   522/522
(100 %)
2 diff
(99.7 %id)
BQ320814 colon .o 1138 to 1403 24 to 289       266/289
(92 %)
9 diff
(96.9 %id)
BQ320825 colon .o 1138 to 1403 5 to 271       267/271
(98 %)
8 diff
(97.1 %id)
DB345568 thymus .o 1847 to 2380 534 to 1       534/534
(100 %)
2 diff
(99.7 %id)
AK057580 thymus .p 1 to 2811 2 to 2813   available from FLJ,   2813/2813
(100 %)
3 diff
(99.9 %id)
NR_033449.1   .p 1 to 3073 2 to 3074   RefSeq, tiling clone,   3074/3074
(100 %)
5 diff
(99.9 %id)
DB101149 thymus .p 1 to 519 2 to 520   capped   519/523
(99 %)
2 diff
(99.7 %id)
DB127064 thymus .p 25 to 600 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB144651 thymus .p 79 to 618 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB342341 thymus .p 2327 to 2811 484 to 1       484/484
(100 %)
2 diff
(99.6 %id)
DB164902 thymus .q 1 to 591 2 to 592   tiling clone, capped   591/591
(100 %)
2 diff
(99.7 %id)
DB347084 thymus .q 2898 to 3431 534 to 1   tiling clone,   534/534
(100 %)
1 diff
(99.9 %id)
DB153362 thymus .r 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DB160851 thymus .r 18 to 608 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB162056 thymus .r 45 to 629 2 to 586 exact tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DB128524 thymus .s 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DB103724 thymus .s 4 to 562 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB154150 thymus .s 4 to 607 2 to 605 exact tiling clone, capped   604/604
(100 %)
0 diff
(100 %id)
DB131912 thymus .s 11 to 561 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
CV375784 nervous_tumor .t 1 to 477 1 to 472   tiling clone,   472/472
(100 %)
5 diff
(99.0 %id)
CV375851 nervous_tumor .t 93 to 582 486 to 1     Submitted on the opposite strand 486/486
(100 %)
9 diff
(98.2 %id)
DB121367 thymus .t 254 to 821 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB154684 thymus .t 463 to 1021 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
BG953696 colon .t 502 to 668 186 to 21       166/186
(89 %)
0 diff
(100 %id)
AI361855 B-cell, chronic lymphotic leukemia .t 970 to 1527 563 to 6   tiling clone,   558/563
(99 %)
0 diff
(100 %id)
BG231282 nasopharynx, normal epithelium .u 1 to 266 7 to 272   tiling clone,   266/272
(97 %)
6 diff
(97.8 %id)
BG060190 nasopharynx, normal epithelium .u 11 to 321 1 to 311       311/387
(80 %)
9 diff
(97.7 %id)
DB157579 thymus .u 115 to 715 2 to 602   tiling clone, capped   601/601
(100 %)
0 diff
(100 %id)
CR976424 T-Lymphocytes .va 1 to 661 9 to 671 A64V P67X S69L G70R K71E ... tiling clone,   663/675
(98 %)
10 diff
(98.6 %id)
BJ991557 hepatoblastoma .vb 1 to 585 1 to 585 exact tiling clone,   585/585
(100 %)
1 diff
(99.9 %id)
BJ991558 hepatoblastoma .vb 1320 to 1859 540 to 1   tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
BX426110 T cells (Jurkat cell line) .vc 1 to 1010 11 to 1020 G95R tiling clone,   1010/1140
(88 %)
21 diff
(98.2 %id)
BX452307 T cells (Jurkat cell line) .vc 716 to 1639 1 to 914   tiling clone,   914/922
(99 %)
46 diff
(95.1 %id)
DB110642 thymus .vd 1 to 574 9 to 582 exact tiling clone, capped   581/581
(100 %)
1 diff
(99.9 %id)
DA951307 Spleen .ve 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
2 diff
(99.7 %id)
DB161469 thymus .vf 1 to 566 2 to 567 K34M tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
DB150016 thymus .vg 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
BM987599 mixed .vh 1 to 475 492 to 18 exact tiling clone,   475/492
(96 %)
0 diff
(100 %id)
DB161641 thymus .vi 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA955990 Spleen .vj 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
DA814411   .vk 1 to 542 2 to 544 exact tiling clone, capped   543/543
(100 %)
2 diff
(99.7 %id)
DB161143 thymus .vl 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
Z47364 lymphoma .vm 1 to 516 1 to 516 exact tiling clone,   516/516
(100 %)
3 diff
(99.5 %id)
TI_1540413110   .vn 1 to 367 368 to 2 exact tiling clone,   366/653
(56 %)
0 diff
(100 %id)
CR995141 T-Lymphocytes Gene TCF7, variant not shown         This clone was ignored    
CR987454 T-Lymphocytes Gene TCF7, variant not shown         This clone was ignored    
CB267952 adipose Gene TCF7, variant not shown         Suspected internal deletion, this clone was ignored    
DB471695 hippocampus Gene TCF7, variant not shown         Suspected internal deletion, this clone was ignored    
D16929   Gene TCF7, variant not shown         Suspected internal deletion, this clone was ignored    
DB108043 thymus Gene TCF7, variant not shown       capped This clone was ignored    
DB343108 thymus Gene TCF7, variant not shown         This clone was ignored    
DB109145 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB132931 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB134735 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB134995 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB145305 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB150668 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB151457 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB156865 thymus Gene TCF7, variant not shown       capped This clone was ignored    
DB346562 thymus Gene TCF7, variant not shown         This clone was ignored    
DB163006 thymus Gene TCF7, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC