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Gene TCF21TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
182 supporting clones for gene TCF21 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB960740 Human Placenta, placenta TCF21.a 1 to 622 24 to 650   tiling clone,   627/808
(77 %)
11 diff
(98.7 %id)
CF995192 Human Placenta, placenta TCF21.a 1 to 503 24 to 529       506/930
(54 %)
6 diff
(99.4 %id)
NM_198392.2   TCF21.a 13 to 3220 1 to 3208 exact RefSeq, AAA   3208/3208
(100 %)
0 diff
(100 %id)
CF128914 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 14 to 757 1 to 744       744/744
(100 %)
0 diff
(100 %id)
TI_154189070   TCF21.a 14 to 856 44 to 875 K139X A157V E161R S162V D163P ...     832/971
(85 %)
12 diff
(98.8 %id)
CB996078 placenta, pre-eclamptic placenta TCF21.a 18 to 462 24 to 468       445/481
(92 %)
4 diff
(99.2 %id)
BM811192 ovary (pool of 3) TCF21.a 20 to 751 11 to 742       732/1167
(62 %)
6 diff
(99.5 %id)
TI_57152922   TCF21.a 20 to 678 22 to 679       658/679
(96 %)
6 diff
(99.2 %id)
DR007041 Spleen TCF21.a 24 to 598 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
BI838855 pooled pancreas and spleen TCF21.a 25 to 692 24 to 694       671/694
(96 %)
6 diff
(99.2 %id)
TI_57162345   TCF21.a 25 to 692 24 to 694       671/694
(96 %)
6 diff
(99.2 %id)
DR006964 Spleen TCF21.a 25 to 733 9 to 721       713/721
(98 %)
6 diff
(99.2 %id)
BI765033 pooled colon, kidney, stomach TCF21.a 27 to 678 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
CF130905 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 27 to 765 1 to 737       737/738
(99 %)
10 diff
(98.7 %id)
TI_57149953   TCF21.a 27 to 739 28 to 745       718/957
(75 %)
30 diff
(96.9 %id)
TI_57179660   TCF21.a 27 to 777 59 to 810       752/810
(92 %)
6 diff
(99.3 %id)
TI_57165326   TCF21.a 27 to 816 27 to 811       785/811
(96 %)
10 diff
(98.8 %id)
TI_154193346   TCF21.a 27 to 875 51 to 882 N137Y K139T N149T L150*     832/1001
(83 %)
26 diff
(97.5 %id)
BQ072411 pooled lung and spleen TCF21.a 28 to 841 1 to 821 W108X N149K K159E D163E T169N ...     821/1065
(77 %)
16 diff
(98.5 %id)
CF126927 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 28 to 783 1 to 755       755/757
(99 %)
4 diff
(99.5 %id)
TI_154190006   TCF21.a 28 to 868 50 to 879 W152X P153A A157G E161R S162V ...     830/979
(84 %)
19 diff
(98.1 %id)
R63028 placenta TCF21.a 30 to 443 1 to 417       417/417
(100 %)
14 diff
(96.7 %id)
BI763701 pooled colon, kidney, stomach TCF21.a 30 to 739 1 to 727       727/727
(100 %)
57 diff
(92.2 %id)
BC025697 Pancreas, Spleen, adult pooled TCF21.a 31 to 3220 1 to 3190 exact tiling clone, available from MGC, AAA   3190/3190
(100 %)
8 diff
(99.8 %id)
BI770998 pooled lung and spleen TCF21.a 32 to 777 1 to 746       746/746
(100 %)
4 diff
(99.5 %id)
CF994025 Human Placenta, placenta TCF21.a 32 to 740 28 to 739       712/852
(83 %)
8 diff
(99.1 %id)
AA340993 Kidney TCF21.a 33 to 313 1 to 280       280/280
(100 %)
3 diff
(99.0 %id)
BI837765 pooled pancreas and spleen TCF21.a 33 to 816 1 to 779       779/779
(100 %)
11 diff
(98.6 %id)
CF127519 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 33 to 830 1 to 797 A178R S179P     797/800
(99 %)
2 diff
(99.8 %id)
TI_154194092   TCF21.a 33 to 821 50 to 833       784/1052
(74 %)
20 diff
(98.1 %id)
BX360244 Placenta Cot 25-normalized TCF21.a 38 to 1050 1 to 996 C20X M25X S42X T177P A178R ...     996/996
(100 %)
16 diff
(98.4 %id)
CF127896 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 40 to 821 1 to 777       777/785
(98 %)
9 diff
(98.9 %id)
CF127034 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 40 to 834 1 to 794 K139X M155X V156G A157G G175X ...     794/794
(100 %)
5 diff
(99.4 %id)
BP422135 small intestine TCF21.a 49 to 560 1 to 512     Submitted on the opposite strand 512/512
(100 %)
1 diff
(99.9 %id)
BF848813 lung_normal TCF21.a 51 to 542 12 to 503       492/504
(97 %)
11 diff
(97.9 %id)
CF126467 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 54 to 766 1 to 712       712/717
(99 %)
5 diff
(99.4 %id)
TI_154189457   TCF21.a 54 to 868 48 to 849 W108X K139X P153A M155Y V156G ...     802/983
(81 %)
19 diff
(98.1 %id)
CN409630 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells TCF21.a 57 to 770 1 to 718       718/718
(100 %)
4 diff
(99.5 %id)
BM906597 ovary (pool of 3) TCF21.a 58 to 622 1 to 567       567/1217
(46 %)
27 diff
(97.8 %id)
CF128246 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 166 to 815 1 to 645       645/645
(100 %)
6 diff
(99.1 %id)
TI_57180978   TCF21.a 218 to 1148 47 to 979 D11V F31L V32*     933/981
(95 %)
30 diff
(97.0 %id)
BI769090 pooled lung and spleen TCF21.a 227 to 1148 1 to 924 D11V F31L V32*     924/926
(99 %)
25 diff
(97.4 %id)
BT019660   TCF21.a 290 to 827 1 to 538       538/540
(99 %)
1 diff
(99.9 %id)
CR450293   TCF21.a 290 to 826 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BX417364 placenta TCF21.a 355 to 1097 376 to 1118       743/1118
(66 %)
24 diff
(97.9 %id)
TI_154186770   TCF21.a 420 to 1264 50 to 888       839/1003
(83 %)
13 diff
(98.8 %id)
CF125244 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 421 to 1146 1 to 724       724/724
(100 %)
4 diff
(99.5 %id)
TI_57150172   TCF21.a 641 to 739 649 to 751       617/751
(82 %)
17 diff
(97.8 %id)
BG746853 adenocarcinoma cell line, colon TCF21.a 743 to 1549 1 to 818       818/829
(98 %)
20 diff
(97.6 %id)
AA905950 pooled TCF21.a 798 to 1183 385 to 1   tiling clone,   385/385
(100 %)
8 diff
(98.0 %id)
CO245616 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.a 970 to 1604 1 to 631       631/820
(76 %)
6 diff
(99.3 %id)
AK091844 lung TCF21.a 985 to 3220 1 to 2236   available from FLJ,   2236/2236
(100 %)
9 diff
(99.6 %id)
AX747216   TCF21.a 985 to 3220 1 to 2236       2236/2236
(100 %)
9 diff
(99.6 %id)
DA586579 lung TCF21.a 986 to 1528 2 to 544   capped   543/543
(100 %)
3 diff
(99.5 %id)
DA635096 Kidney TCF21.a 1064 to 1630 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BX360243 Placenta Cot 25-normalized TCF21.a 2145 to 3209 1059 to 1       1059/1059
(100 %)
12 diff
(98.9 %id)
BX454374 placenta TCF21.a 2592 to 3217 628 to 1       628/768
(81 %)
22 diff
(97.2 %id)
DB319436 lung TCF21.a 2681 to 3220 541 to 1       541/541
(100 %)
3 diff
(99.5 %id)
CR606057 Placenta Cot 25-normalized TCF21.b 1 to 1250 1 to 1250 exact tiling clone,   1250/1250
(100 %)
0 diff
(100 %id)
AL550251 placenta, Placenta Cot 25-normalized TCF21.b 1 to 913 1 to 908 exact fully sequenced,   908/908
(100 %)
1 diff
(99.9 %id)
BX337699 Placenta Cot 25-normalized TCF21.b 1 to 1040 1 to 1031 V32X R89X E166X     1031/1056
(97 %)
17 diff
(98.4 %id)
NM_003206.3   TCF21.b 2 to 1268 1 to 1267 exact RefSeq, AAA   1267/1267
(100 %)
0 diff
(100 %id)
CR616308 Placenta Cot 25-normalized TCF21.b 7 to 1258 1 to 1252 exact     1252/1252
(100 %)
0 diff
(100 %id)
AL552380 placenta, Placenta Cot 25-normalized TCF21.b 7 to 973 1 to 965 E161R S162V D163T L164*     965/965
(100 %)
2 diff
(99.8 %id)
BI770596 pooled lung and spleen TCF21.b 11 to 854 1 to 837 F31L V32*     837/837
(100 %)
13 diff
(98.5 %id)
TI_57183503   TCF21.b 11 to 854 35 to 871 F31L V32*     837/871
(96 %)
21 diff
(97.6 %id)
BI768711 pooled lung and spleen TCF21.b 15 to 843 1 to 826 F31L V32*     826/826
(100 %)
7 diff
(99.2 %id)
TI_57181135   TCF21.b 15 to 843 69 to 894 F31L V32*     826/894
(92 %)
8 diff
(99.2 %id)
AF035718   TCF21.b 18 to 1271 1 to 1254 K61R     1254/1254
(100 %)
1 diff
(100.0 %id)
AF047419   TCF21.b 19 to 1272 1 to 1254 A83T     1254/1257
(99 %)
4 diff
(99.7 %id)
CR594669 Placenta Cot 25-normalized TCF21.b 19 to 1239 1 to 1221 exact     1221/1221
(100 %)
0 diff
(100 %id)
AL552119 placenta, Placenta Cot 25-normalized TCF21.b 19 to 727 1 to 709       709/1099
(64 %)
1 diff
(100.0 %id)
BI763441 pooled colon, kidney, stomach TCF21.b 21 to 880 1 to 872 T64P K65R K66R S67A L69*     872/924
(94 %)
56 diff
(94.0 %id)
TI_154193043   TCF21.b 21 to 911 50 to 930 A178R S179P     881/1009
(87 %)
12 diff
(98.9 %id)
BM923344 pooled colon, kidney, stomach TCF21.b 24 to 890 14 to 883 F154L M155Y V156G A157G G158R ...     870/1098
(79 %)
17 diff
(98.5 %id)
TI_154190132   TCF21.b 28 to 1101 50 to 1098 K139X M155X V156G A157G G175X ...     1049/1049
(100 %)
32 diff
(97.0 %id)
TI_154193587   TCF21.b 28 to 863 50 to 872 K139X A157X K159X E161R S162V ...     823/989
(83 %)
14 diff
(98.6 %id)
BI767574 pooled lung and spleen TCF21.b 44 to 858 1 to 816 F31C N149K F154L M155W V156W ...     816/818
(99 %)
11 diff
(98.7 %id)
TI_57184309   TCF21.b 44 to 858 30 to 845 F31C N149K F154L M155W V156W ...     816/847
(96 %)
15 diff
(98.3 %id)
BX107489 placenta TCF21.b 84 to 878 1 to 795 exact     795/796
(99 %)
1 diff
(99.9 %id)
CF128484 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.b 193 to 975 1 to 782 exact     782/782
(100 %)
2 diff
(99.8 %id)
TI_154194376   TCF21.b 193 to 1107 47 to 955 exact     909/1046
(86 %)
18 diff
(98.3 %id)
BM544256 ovary (pool of 3) TCF21.b 213 to 1149 13 to 953 exact     941/1038
(90 %)
23 diff
(97.8 %id)
AW025547 Kidney TCF21.b 302 to 1108 815 to 13   AAA   803/803
(100 %)
45 diff
(94.4 %id)
TI_149293840   TCF21.b 450 to 1268 892 to 83   AAA   810/942
(85 %)
9 diff
(99.1 %id)
R65626 placenta TCF21.b 481 to 893 1 to 422       422/426
(99 %)
30 diff
(93.0 %id)
AA335365 epididymis TCF21.b 554 to 833 1 to 280       280/280
(100 %)
1 diff
(99.7 %id)
TI_149287191   TCF21.b 554 to 1268 799 to 94   AAA   706/1091
(64 %)
84 diff
(92.4 %id)
AA027032 uterus TCF21.b 557 to 820 9 to 272       264/272
(97 %)
4 diff
(98.6 %id)
TI_154025532   TCF21.b 558 to 1268 791 to 82   AAA   710/711
(99 %)
33 diff
(95.4 %id)
AA028184 uterus TCF21.b 562 to 844 1 to 282   fully sequenced,   282/282
(100 %)
1 diff
(99.7 %id)
TI_149290865   TCF21.b 572 to 1268 716 to 22   AAA   695/697
(99 %)
32 diff
(95.5 %id)
AW878565 ovary TCF21.b 586 to 935 350 to 1       350/350
(100 %)
3 diff
(99.2 %id)
BF090858 ovary TCF21.b 586 to 935 351 to 1       351/351
(100 %)
5 diff
(98.6 %id)
BF090868 ovary TCF21.b 586 to 935 350 to 1       350/350
(100 %)
2 diff
(99.5 %id)
BU677833 lung TCF21.b 590 to 1268 696 to 19   AAA   678/678
(100 %)
1 diff
(99.9 %id)
AW190108 adenocarcinoma, Pancreas TCF21.b 606 to 1115 509 to 1       509/510
(99 %)
25 diff
(95.1 %id)
BM975273 lung TCF21.b 610 to 1268 677 to 19   AAA   659/659
(100 %)
0 diff
(100 %id)
AW242648 Kidney TCF21.b 623 to 1269 649 to 1       649/771
(84 %)
14 diff
(98.2 %id)
W73859.
matches multiple genes
heart TCF21.b 630 to 1267 1 to 633   AAA also hits gene MGST2 633/633
(100 %)
8 diff
(98.8 %id)
BQ019293 lung, Metastatic Chondrosarcoma TCF21.b 631 to 1268 655 to 19   AAA   637/637
(100 %)
1 diff
(99.9 %id)
BQ016290 lung, Metastatic Chondrosarcoma TCF21.b 633 to 1267 653 to 19   AAA   635/635
(100 %)
0 diff
(100 %id)
AI971939 fibrotheoma, ovary TCF21.b 659 to 1272 618 to 4       615/618
(99 %)
5 diff
(99.2 %id)
BQ021615 lung, Metastatic Chondrosarcoma TCF21.b 672 to 1268 615 to 19   AAA   597/604
(98 %)
5 diff
(99.2 %id)
BU581564 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) TCF21.b 674 to 1257 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BQ024848 placenta TCF21.b 682 to 1268 603 to 19   AAA   585/594
(98 %)
2 diff
(99.7 %id)
W73825.
matches multiple genes
heart TCF21.b 687 to 1268 576 to 1     also hits gene MGST2 576/668
(86 %)
9 diff
(98.7 %id)
AV655654 corresponding non cancerous liver tissue TCF21.b 692 to 1268 1 to 577   AAA Submitted on the opposite strand 577/577
(100 %)
0 diff
(100 %id)
BQ017570 lung, Lung Focal Fibrosis TCF21.b 693 to 1268 594 to 19   AAA   576/576
(100 %)
0 diff
(100 %id)
AW086478 ovary, papillary serous carcinoma TCF21.b 695 to 1268 587 to 15   AAA   573/573
(100 %)
10 diff
(98.3 %id)
AL552084 placenta, Placenta Cot 25-normalized TCF21.b 730 to 1239 508 to 1       508/1169
(43 %)
4 diff
(99.7 %id)
AW197130 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney TCF21.b 731 to 1115 385 to 1       385/385
(100 %)
17 diff
(95.6 %id)
AI721064 colon TCF21.b 734 to 1268 535 to 1       535/535
(100 %)
12 diff
(97.8 %id)
BU688034 lung TCF21.b 745 to 1268 542 to 19   AAA   524/532
(98 %)
0 diff
(100 %id)
AA341736 Kidney TCF21.b 750 to 972 1 to 223       223/223
(100 %)
2 diff
(99.2 %id)
BF060760 pooled TCF21.b 755 to 1272 521 to 4       518/521
(99 %)
0 diff
(100 %id)
H95174 placenta TCF21.b 764 to 1233 1 to 481       481/484
(99 %)
6 diff
(98.8 %id)
BX327300 Placenta Cot 25-normalized TCF21.b 797 to 1272 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
BX327301 Placenta Cot 25-normalized TCF21.b 801 to 1272 9 to 479       471/479
(98 %)
6 diff
(98.8 %id)
AA028092 uterus TCF21.b 814 to 1269 456 to 1   fully sequenced,   456/456
(100 %)
2 diff
(99.6 %id)
AI336106 lung TCF21.b 820 to 1271 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AI185851 lung TCF21.b 824 to 1279 458 to 3   tiling clone,   456/458
(99 %)
0 diff
(100 %id)
N66932 liver and spleen TCF21.b 826 to 1269 445 to 1       445/445
(100 %)
3 diff
(99.4 %id)
AA027107 uterus TCF21.b 839 to 1269 432 to 1       432/444
(97 %)
4 diff
(99.1 %id)
BF433149 carcinoid, lung TCF21.b 840 to 1272 438 to 6       433/438
(98 %)
0 diff
(100 %id)
BF221953 Prostate TCF21.b 847 to 1268 422 to 1       422/422
(100 %)
0 diff
(100 %id)
BU581238 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) TCF21.b 875 to 1267 407 to 15   AAA   393/393
(100 %)
8 diff
(98.0 %id)
AL574170 placenta, Placenta Cot 25-normalized TCF21.b 883 to 1241 365 to 9   fully sequenced,   357/365
(97 %)
7 diff
(98.1 %id)
BI832707 pooled pancreas and spleen TCF21.b 894 to 1267 1 to 373   AAA   373/373
(100 %)
4 diff
(99.0 %id)
TI_57162229   TCF21.b 894 to 1267 35 to 407   AAA   373/407
(91 %)
6 diff
(98.6 %id)
R22322 placenta TCF21.b 925 to 1268 348 to 1       348/348
(100 %)
4 diff
(98.9 %id)
AI262045 Kidney TCF21.b 926 to 1268 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AA972047 pooled TCF21.b 927 to 1269 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
AW873497 pooled TCF21.b 930 to 1268 350 to 12   AAA   339/339
(100 %)
1 diff
(99.8 %id)
AI628260 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors TCF21.b 933 to 1115 183 to 1       183/183
(100 %)
0 diff
(100 %id)
AI520940 poorly differentiated adenocarcinoma withsignet ring cell features, stomach TCF21.b 935 to 1115 179 to 1       179/179
(100 %)
2 diff
(98.9 %id)
R67008 placenta TCF21.b 940 to 1268 342 to 1       342/347
(98 %)
17 diff
(95.2 %id)
AA358224 lung TCF21.b 961 to 1266 1 to 306       306/306
(100 %)
0 diff
(100 %id)
AA699782 liver and spleen TCF21.b 1005 to 1267 265 to 1       265/265
(100 %)
5 diff
(98.2 %id)
C21328   TCF21.b 1154 to 1268 1 to 115       115/115
(100 %)
0 diff
(100 %id)
BM989914 lung, Lung Focal Fibrosis TCF21.c-u 1 to 673 10 to 683   tiling clone, Submitted on the opposite strand 674/683
(98 %)
6 diff
(99.2 %id)
AA341127 Kidney TCF21.c-u 3 to 332 1 to 331   tiling clone,   331/331
(100 %)
1 diff
(99.7 %id)
CF126232 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.c-u 188 to 872 1 to 685       685/685
(100 %)
3 diff
(99.6 %id)
TI_154189191   TCF21.c-u 188 to 1064 51 to 911       861/980
(87 %)
19 diff
(98.1 %id)
H04607 placenta TCF21.c-u 423 to 957 1 to 540       540/540
(100 %)
11 diff
(98.0 %id)
BX112351 placenta TCF21.c-u 456 to 1299 1 to 845   tiling clone,   845/845
(100 %)
4 diff
(99.6 %id)
R53754 placenta TCF21.c-u 456 to 836 17 to 402       386/406
(95 %)
9 diff
(97.8 %id)
TI_149278434   TCF21.c-u 496 to 1348 944 to 95       850/1203
(70 %)
0 diff
(100 %id)
R28437 placenta TCF21.c-u 616 to 954 1 to 353       353/358
(98 %)
20 diff
(94.5 %id)
TI_154007340   TCF21.c-u 625 to 1351 816 to 90   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 727/1042
(69 %)
5 diff
(99.6 %id)
AA340644 Kidney TCF21.c-u 651 to 979 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
BU678417 lung TCF21.c-u 708 to 1348 664 to 23       642/664
(96 %)
0 diff
(100 %id)
CA434892 lung, Metastatic Chondrosarcoma TCF21.c-u 708 to 1351 662 to 19   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 644/662
(97 %)
0 diff
(100 %id)
AW886730 ovary TCF21.c-u 735 to 1289 555 to 8       548/555
(98 %)
0 diff
(100 %id)
AI827830 pooled TCF21.c-u 802 to 1350 547 to 1       547/547
(100 %)
9 diff
(98.4 %id)
AW973597   TCF21.c-u 828 to 1348 522 to 3     Submitted on the opposite strand 520/529
(98 %)
0 diff
(100 %id)
R53755 placenta TCF21.c-u 857 to 1354 494 to 2       493/497
(99 %)
0 diff
(100 %id)
AA586575 synovial sarcoma TCF21.c-u 876 to 1327 452 to 1   tiling clone,   452/452
(100 %)
0 diff
(100 %id)
AI806744 pooled TCF21.c-u 893 to 1355 469 to 7       463/469
(98 %)
0 diff
(100 %id)
AW514561 pooled TCF21.c-u 893 to 1349 459 to 3       457/459
(99 %)
0 diff
(100 %id)
H98659 melanocyte TCF21.c-u 924 to 1351 433 to 1       433/437
(99 %)
9 diff
(98.0 %id)
BF510107   TCF21.c-u 937 to 1367 448 to 18   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 431/454
(94 %)
0 diff
(100 %id)
TI_154191487   TCF21.c-u 955 to 1355 37 to 437   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 401/1050
(38 %)
3 diff
(99.8 %id)
AI685888 Prostate TCF21.c-u 974 to 1367 395 to 2       394/395
(99 %)
0 diff
(100 %id)
AA809709 colon TCF21.c-u 1048 to 1191 144 to 1       144/144
(100 %)
2 diff
(98.7 %id)
AA700971 liver and spleen TCF21.c-u 1062 to 1355 295 to 2       294/295
(99 %)
0 diff
(100 %id)
AA983810 pooled TCF21.c-u 1088 to 1348 260 to 1       260/260
(100 %)
2 diff
(99.3 %id)
AI474361 Prostate TCF21.c-u 1089 to 1355 279 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 268/279
(96 %)
0 diff
(100 %id)
CF129729 Chondrosarcoma Lung Metastasis cell lines, lung TCF21.c-u 1098 to 1355 1 to 258   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 258/298
(86 %)
2 diff
(99.4 %id)
R25410 placenta TCF21.c-u 1117 to 1345 234 to 5       230/234
(98 %)
0 diff
(100 %id)
AK093019 Spleen TCF21.c-u 1317 to 3833 1 to 2517 T130N V131S S132V G133R G134R ... tiling clone, available from FLJ,   2517/2517
(100 %)
5 diff
(99.9 %id)
AX747860   TCF21.c-u 1317 to 3833 1 to 2517 T130N V131S S132V G133R G134R ...     2517/2517
(100 %)
5 diff
(99.9 %id)
DA944744 Spleen TCF21.c-u 1318 to 1863 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BX098440 carcinoid, lung TCF21.c-u 3260 to 3847 588 to 1   tiling clone, Submitted on the opposite strand 588/588
(100 %)
2 diff
(99.7 %id)
BE220873 carcinoid, lung TCF21.c-u 3276 to 3744 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
DB333438 Spleen TCF21.c-u 3289 to 3833 546 to 1       546/546
(100 %)
1 diff
(99.9 %id)
AA904330 carcinoid, lung TCF21.c-u 3343 to 3622 1 to 281     Submitted on the opposite strand 281/281
(100 %)
5 diff
(98.3 %id)
AW973770   TCF21.c-u 3459 to 3736 388 to 111     Submitted on the opposite strand 278/490
(56 %)
0 diff
(100 %id)
AA559262 bone marrow, stem cells TCF21.c-u 3459 to 3736 285 to 8       278/290
(95 %)
0 diff
(100 %id)
W21552 lung TCF21.d 1 to 175 1 to 174   tiling clone,   174/176
(98 %)
4 diff
(97.8 %id)
H03852 placenta TCF21.d 67 to 444 1 to 383   tiling clone,   383/449
(85 %)
16 diff
(96.5 %id)
AI478874 pooled TCF21.d 346 to 841 497 to 2   tiling clone,   496/497
(99 %)
0 diff
(100 %id)
N95204 lung TCF21.d 423 to 837 423 to 19   tiling clone, AAA   405/433
(93 %)
12 diff
(97.3 %id)
H03853 placenta TCF21.d 597 to 821 226 to 1       226/228
(99 %)
13 diff
(94.3 %id)
DA537663 Kidney TCF21.e-u 1 to 554 2 to 555 P22A Q59* tiling clone, capped   554/554
(100 %)
4 diff
(99.3 %id)
T50835 fetal spleen, Spleen TCF21.e-u 122 to 413 1 to 300   tiling clone,   300/365
(82 %)
14 diff
(96.2 %id)
BX337612 Placenta Cot 25-normalized Gene TCF21, variant not shown              
BX337613 Placenta Cot 25-normalized Gene TCF21, variant not shown              
H51772 liver and spleen Gene TCF21, variant not shown       fully sequenced,      
H51773 liver and spleen Gene TCF21, variant not shown       fully sequenced,      
AI927658 Kidney Gene TCF21, variant not shown         Suspected internal deletion, this clone was ignored    
BF439597 pooled Gene TCF21, variant not shown         Suspected internal deletion, this clone was ignored    
BF061100 fibrotheoma, ovary Gene TCF21, variant not shown         Suspected internal deletion, this clone was ignored    
TI_149277646   Gene TCF21, variant not shown         This clone was ignored    
TI_149309656   Gene TCF21, variant not shown         This clone was ignored    
TI_149310548   Gene TCF21, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BU688835 lung Gene TCF21, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI