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Gene TCERG1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
61 supporting clones for gene TCERG1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC042951 Brain, hippocampus .a 1 to 2621 1 to 2621 P339Q E529K Q566K tiling clone, available from MGC, AAA   2621/2621
(100 %)
8 diff
(99.7 %id)
BI550916 brain, hippocampus .a 1 to 544 1 to 541       541/544
(99 %)
13 diff
(97.7 %id)
TI_44171987   .a 6 to 544 125 to 660       536/663
(80 %)
8 diff
(98.8 %id)
NM_174937.3   .a 6 to 2621 1 to 2616 exact RefSeq, AAA   2616/2616
(100 %)
0 diff
(100 %id)
TI_891527330   .a 151 to 759 617 to 9     Submitted on the opposite strand 609/1166
(52 %)
5 diff
(99.6 %id)
TI_891530422   .a 151 to 1211 44 to 1100       1057/1250
(84 %)
18 diff
(98.6 %id)
TI_927047523   .a 151 to 1238 42 to 1132       1091/1135
(96 %)
21 diff
(98.2 %id)
TI_927048014   .a 151 to 950 46 to 845     Submitted on the opposite strand 800/1226
(65 %)
8 diff
(99.4 %id)
BC093639 Brain, cerebral cortex, PCR rescued clones .a 157 to 1924 1 to 1768       1768/1768
(100 %)
1 diff
(100.0 %id)
BC101535 Brain, cerebral cortex, PCR rescued clones .a 157 to 1930 1 to 1774       1774/1774
(100 %)
0 diff
(100 %id)
TI_891527329   .a 157 to 1181 1033 to 8     Submitted on the opposite strand 1026/1179
(87 %)
20 diff
(98.4 %id)
TI_891527328   .a 324 to 1351 1056 to 28     Submitted on the opposite strand 1029/1181
(87 %)
22 diff
(98.2 %id)
TI_927043306   .a 471 to 1351 914 to 26       887/1073
(82 %)
15 diff
(98.7 %id)
TI_927047723   .a 484 to 1583 1 to 1096       1096/1226
(89 %)
15 diff
(98.8 %id)
TI_891529853   .a 485 to 1579 1 to 1094   AAA   1094/1215
(90 %)
18 diff
(98.6 %id)
TI_891527333   .a 765 to 1779 1025 to 10     Submitted on the opposite strand 1016/1188
(85 %)
8 diff
(99.4 %id)
TI_927047724   .a 794 to 1922 8 to 1129       1122/1222
(91 %)
24 diff
(98.1 %id)
TI_891529854   .a 796 to 1869 11 to 1074       1064/1208
(88 %)
23 diff
(98.1 %id)
TI_927047725   .a 932 to 1932 8 to 1008   tiling clone,   1001/1216
(82 %)
1 diff
(100.0 %id)
TI_891529855   .a 945 to 1932 19 to 1006       991/1229
(80 %)
7 diff
(99.5 %id)
TI_891530419   .a 945 to 1932 1033 to 47       987/1253
(78 %)
1 diff
(100.0 %id)
TI_927048012   .a 945 to 1932 1056 to 70     Submitted on the opposite strand 987/1256
(78 %)
3 diff
(99.8 %id)
TI_927047618   .a 1034 to 1932 970 to 72       899/1184
(75 %)
0 diff
(100 %id)
AW291777   .a 1155 to 1516 15 to 376     Submitted on the opposite strand 362/376
(96 %)
6 diff
(98.5 %id)
AI695396 carcinoid, lung .a 1168 to 1408 1 to 241     Submitted on the opposite strand 241/241
(100 %)
1 diff
(99.6 %id)
TI_927047721   .a 1254 to 1932 1 to 679       679/1238
(54 %)
3 diff
(99.8 %id)
TI_891529851   .a 1255 to 1932 1 to 679       679/1232
(55 %)
3 diff
(99.8 %id)
CR747632 brain .a 1255 to 1733 479 to 1     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
BM725816 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1284 to 1381 1 to 98   fully sequenced, Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 98/98
(100 %)
0 diff
(100 %id)
BM677934 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1320 to 1615 298 to 3   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 296/298
(99 %)
2 diff
(99.4 %id)
R87450 brain .a 1397 to 1717 322 to 1     Submitted on the opposite strand 322/322
(100 %)
2 diff
(99.4 %id)
BI004698 head_normal .a 1537 to 1750 1 to 214       214/218
(98 %)
7 diff
(96.8 %id)
TI_927047722   .a 1624 to 1932 31 to 338       308/1223
(25 %)
7 diff
(99.5 %id)
T19377   .a 1678 to 1978 1 to 302       302/302
(100 %)
1 diff
(99.7 %id)
BM706684 eye, optic nerve .a 1838 to 2424 4 to 590   tiling clone,   587/590
(99 %)
6 diff
(99.0 %id)
AI793303 carcinoid, lung .a 1913 to 2409 1 to 497       497/497
(100 %)
6 diff
(98.8 %id)
DB446129.
matches multiple genes
testis .a 1932 to 2381 1 to 450     also hits gene tornuby 450/451
(99 %)
7 diff
(98.5 %id)
AI791230 carcinoid, lung .a 2011 to 2491 1 to 481       481/481
(100 %)
1 diff
(99.8 %id)
BU069015.
matches multiple genes
Pancreas, Purified pancreatic islet .a 2065 to 2623 559 to 1     also hits gene tornuby 559/559
(100 %)
1 diff
(99.9 %id)
AI732913 carcinoid, lung .a 2126 to 2621 497 to 1       497/497
(100 %)
2 diff
(99.6 %id)
AI733278 carcinoid, lung .a 2165 to 2621 473 to 17   AAA   457/457
(100 %)
1 diff
(99.8 %id)
BM689725 eye, Retina Foveal and Macular .a 2205 to 2621 1 to 417   AAA   417/417
(100 %)
0 diff
(100 %id)
AA829921 carcinoid, lung .a 2215 to 2621 407 to 1       407/407
(100 %)
1 diff
(99.8 %id)
BM711707 eye, human retina .a 2245 to 2623 1 to 379   AAA   379/379
(100 %)
0 diff
(100 %id)
TI_151704694   .a 2245 to 2623 466 to 88   AAA   379/986
(38 %)
0 diff
(100 %id)
AA973690 carcinoid, lung .a 2280 to 2621 358 to 17   AAA   342/342
(100 %)
0 diff
(100 %id)
T19376   .a 2308 to 2623 316 to 1       316/316
(100 %)
0 diff
(100 %id)
BU187047 eye, retinoblastoma .a 2390 to 2621 516 to 757       690/798
(86 %)
20 diff
(97.5 %id)
AW138994   .a 2420 to 2623 214 to 11   AAA   204/204
(100 %)
1 diff
(99.6 %id)
AK096269   .b 1 to 3369 2 to 3371 exact tiling clone, available from FLJ,   3371/3371
(100 %)
9 diff
(99.8 %id)
DA697316   .b 1 to 565 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB323323   .b 2835 to 3369 535 to 1 exact     535/535
(100 %)
0 diff
(100 %id)
DB478457.
matches multiple genes
hippocampus .c 1 to 468 3 to 470   tiling clone, also hits gene tornuby 470/470
(100 %)
3 diff
(99.4 %id)
DA697406   .c 1 to 497 2 to 499   tiling clone, to resequence, capped   498/498
(100 %)
3 diff
(99.4 %id)
BY799994 eye .c 54 to 656 1 to 603 H87R tiling clone,   603/603
(100 %)
1 diff
(99.9 %id)
DB027756 testis .c 380 to 957 2 to 595   capped   594/594
(100 %)
8 diff
(98.7 %id)
DB336736 testis .c 1412 to 1983 572 to 1   tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
DB323326   .c 1446 to 1983 538 to 1   tiling clone, to resequence,   538/538
(100 %)
0 diff
(100 %id)
CK301094 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 1 to 565 580 to 16 exact AAA   565/566
(99 %)
4 diff
(99.3 %id)
BM929784 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 9 to 568 1 to 560   tiling clone, AAA   560/560
(100 %)
0 diff
(100 %id)
TI_151808696   .d-u 9 to 565 79 to 634   fully sequenced, AAA   556/556
(100 %)
3 diff
(99.5 %id)
TI_151732287   .d-u 67 to 565 582 to 84   fully sequenced, AAA   499/499
(100 %)
0 diff
(100 %id)
BX106723 carcinoid, lung .d-u 273 to 721 15 to 463   tiling clone, AAA   449/463
(96 %)
6 diff
(98.8 %id)
AI793130 carcinoid, lung .d-u 275 to 709 16 to 450       435/450
(96 %)
6 diff
(98.7 %id)
AI733200 carcinoid, lung .d-u 292 to 723 433 to 2       432/433
(99 %)
0 diff
(100 %id)
AI609180 brain, tumor, 5 pooled (see description) .d-u 358 to 737 402 to 23   tiling clone, AAA   380/380
(100 %)
5 diff
(98.7 %id)
AA917015 carcinoid, lung .d-u 429 to 721 291 to 1       291/291
(100 %)
4 diff
(98.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC