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Gene TBX3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
353 supporting clones for gene TBX3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA865982 Prostate .a 1 to 557 2 to 562   tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
DA540034 lung .a 31 to 591 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA549718   .a 31 to 536 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
DA014707 adrenal gland .a 34 to 616 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA541110 lung .a 34 to 614 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA890560 rectum .a 45 to 593 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA921078 small intestine .a 51 to 616 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA588019 lung .a 54 to 536 2 to 492   capped   491/491
(100 %)
6 diff
(98.8 %id)
DA594667 lung .a 54 to 591 2 to 547   capped   546/546
(100 %)
6 diff
(99.0 %id)
DA838162 placenta .a 54 to 600 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA848698 placenta .a 54 to 617 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB223592 trachea .a 54 to 620 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA006722   .a 79 to 656 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA009318 adrenal gland .a 79 to 639 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA176308 amygdala .a 210 to 660 2 to 461   capped   460/460
(100 %)
18 diff
(96.1 %id)
CD709018 normal nasopharynx .a 242 to 504 10 to 275       266/275
(96 %)
6 diff
(97.9 %id)
CB960243 Human Placenta, placenta .a 249 to 844 28 to 628       601/811
(74 %)
20 diff
(97.6 %id)
CB988910 Human Placenta, placenta .a 249 to 973 28 to 761   tiling clone,   734/810
(90 %)
13 diff
(98.4 %id)
DA436379 tongue, tumor tissue .a 250 to 829 2 to 584   capped   583/583
(100 %)
7 diff
(98.8 %id)
DA585034 lung .a 250 to 777 2 to 536   capped   535/535
(100 %)
7 diff
(98.7 %id)
DA646416 mammary gland .a 250 to 1037 2 to 808   capped   807/819
(98 %)
22 diff
(97.4 %id)
BX381766 Placenta Cot 25-normalized .a 254 to 1201 1 to 942       942/942
(100 %)
8 diff
(99.2 %id)
NM_016569.3   .a 260 to 5042 1 to 4783 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 4783/4783
(100 %)
0 diff
(100 %id)
DA838563 placenta .a 261 to 819 2 to 565   capped   564/564
(100 %)
7 diff
(98.8 %id)
DA872737 Prostate .a 261 to 828 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
CN288991 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 264 to 943 6 to 684       679/688
(98 %)
5 diff
(99.3 %id)
BX374645 Neuroblastoma Cot 10-normalized .a 270 to 1122 9 to 862       854/869
(98 %)
3 diff
(99.7 %id)
BX341631   .a 270 to 1144 1 to 878       878/878
(100 %)
4 diff
(99.6 %id)
BX378056.
matches multiple genes
Placenta Cot 25-normalized .a 276 to 1260 1 to 982     also hits gene KRT23 982/1033
(95 %)
17 diff
(98.4 %id)
CN288510 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 287 to 935 1 to 653       653/653
(100 %)
2 diff
(99.7 %id)
DB221558 trachea .a 294 to 838 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA844453 placenta .a 408 to 968 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA624796 Kidney .a 422 to 989 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BX340077 Placenta Cot 25-normalized .a 429 to 1406 1 to 972       972/1053
(92 %)
8 diff
(99.3 %id)
BF316365 brain, neuroblastoma .a 430 to 987 1 to 561       561/1088
(51 %)
46 diff
(95.8 %id)
CB959524 Human Placenta, placenta .a 458 to 1053 28 to 632       605/888
(68 %)
13 diff
(98.6 %id)
EC548135 Prostate .a 480 to 587 1 to 106       106/108
(98 %)
3 diff
(97.3 %id)
BQ370459 placenta_normal .a 495 to 792 340 to 44       297/352
(84 %)
0 diff
(100 %id)
BQ719861 sympathetic trunk .a 595 to 1440 11 to 862       852/875
(97 %)
21 diff
(97.6 %id)
EC511148 Prostate .a 627 to 742 1 to 115       115/115
(100 %)
1 diff
(99.2 %id)
EC583142 Prostate .a 628 to 742 1 to 114       114/114
(100 %)
1 diff
(99.2 %id)
EC449739 Prostate .a 655 to 766 1 to 112       112/115
(97 %)
1 diff
(99.2 %id)
AW136159   .a 662 to 1181 523 to 3       521/523
(99 %)
0 diff
(100 %id)
AI659386 Prostate .a 676 to 1154 479 to 1       479/479
(100 %)
0 diff
(100 %id)
DN996145 breast cancer, Mammary gland (cancer tissue) .a 693 to 1307 1 to 614       614/614
(100 %)
6 diff
(99.1 %id)
EC552643 Prostate .a 727 to 849 1 to 117       117/117
(100 %)
6 diff
(94.9 %id)
BP387716 pancreatic islet .a 728 to 1138 1 to 411     Submitted on the opposite strand 411/412
(99 %)
1 diff
(99.8 %id)
EC470554 Prostate .a 752 to 859 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
BE735102 choriocarcinoma, placenta .a 766 to 1617 37 to 860       824/949
(86 %)
46 diff
(95.2 %id)
CF243153 Brain glioblastoma .a 793 to 1642 1 to 856       856/856
(100 %)
20 diff
(97.7 %id)
EC468811 Prostate .a 803 to 902 1 to 100       100/100
(100 %)
0 diff
(100 %id)
BM012034 brain, neuroblastoma, cell line .a 833 to 1531 1 to 705       705/705
(100 %)
28 diff
(96.1 %id)
BC025258 Brain, neuroblastoma .a 834 to 4328 1 to 3495 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 3495/3495
(100 %)
1 diff
(100.0 %id)
TI_59381226   .a 834 to 1531 120 to 823       704/704
(100 %)
6 diff
(99.2 %id)
EC446927 Prostate .a 859 to 955 1 to 95       95/106
(89 %)
2 diff
(98.2 %id)
EC548697 Prostate .a 859 to 955 1 to 95       95/106
(89 %)
2 diff
(98.2 %id)
BQ948902 brain, neuroblastoma, cell line .a 895 to 1733 1 to 848       846/860
(98 %)
13 diff
(98.5 %id)
BQ876701 sympathetic trunk .a 983 to 1621 1 to 646       646/949
(68 %)
23 diff
(97.6 %id)
DB267181 uterus .a 991 to 1588 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
BX401231   .a 1002 to 1932 1 to 932       932/932
(100 %)
3 diff
(99.7 %id)
DR004404 placenta .a 1025 to 1747 1 to 723       723/723
(100 %)
6 diff
(99.2 %id)
EL735350 mixed .a 1224 to 1903 1 to 679       679/679
(100 %)
4 diff
(99.5 %id)
BM771638 stomach .a 1236 to 1901 1 to 666       666/666
(100 %)
0 diff
(100 %id)
AA365408 pineal body .a 1615 to 1717 1 to 103       103/104
(99 %)
1 diff
(99.1 %id)
U69556 whole brain .a 1664 to 2692 9 to 1037       1029/1053
(97 %)
6 diff
(99.5 %id)
R22883 placenta .a 1671 to 1940 1 to 271       271/282
(96 %)
2 diff
(99.3 %id)
CF144907 CNCAP(3)T-225 cell line, Prostate .a 1778 to 2345 1 to 568       568/568
(100 %)
5 diff
(99.2 %id)
TI_154177003   .a 1785 to 2481 83 to 794       712/993
(71 %)
31 diff
(96.9 %id)
BX390785   .a 1798 to 2283 1 to 489       489/520
(94 %)
31 diff
(94.1 %id)
AW027100 thymus, pooled .a 1944 to 2692 748 to 1       748/748
(100 %)
13 diff
(98.3 %id)
BF999005 placenta_normal .a 1960 to 2360 401 to 1       401/401
(100 %)
8 diff
(98.1 %id)
AI742014 pooled .a 1974 to 2658 683 to 1       683/686
(99 %)
21 diff
(97.0 %id)
AA037201 senescent fibroblast .a 1990 to 2424 1 to 436       434/436
(99 %)
6 diff
(98.7 %id)
BF970900 adrenal cortex carcinoma, cell line, adrenal gland .a 1996 to 2681 1 to 677       677/677
(100 %)
11 diff
(98.4 %id)
BF970913 adrenal cortex carcinoma, cell line, adrenal gland .a 1996 to 2677 1 to 673       673/677
(99 %)
9 diff
(98.7 %id)
AI223068 pooled .a 2005 to 2674 669 to 1       669/670
(99 %)
11 diff
(98.4 %id)
R78688 placenta .a 2012 to 2478 1 to 478       478/558
(85 %)
27 diff
(95.2 %id)
CR741284 placenta .a 2013 to 2662 1 to 650       650/650
(100 %)
1 diff
(99.9 %id)
R66728.
matches multiple genes
placenta .a 2018 to 2174 1 to 157     also hits gene sporflawby 157/157
(100 %)
0 diff
(100 %id)
H95005 placenta .a 2062 to 2446 1 to 389       389/390
(99 %)
10 diff
(97.5 %id)
BF439130 pooled .a 2062 to 2692 630 to 1       630/631
(99 %)
8 diff
(98.8 %id)
BE857004 pooled .a 2086 to 2674 589 to 1       589/593
(99 %)
3 diff
(99.5 %id)
FN077602 breast carcinoma .a 2094 to 2151 1 to 58       58/60
(96 %)
1 diff
(98.4 %id)
AA913589 pooled .a 2118 to 2630 516 to 4       513/518
(99 %)
13 diff
(97.5 %id)
AA991171 breast .a 2164 to 2585 422 to 1       422/498
(84 %)
16 diff
(96.8 %id)
AI242146 pooled .a 2166 to 2692 522 to 1       522/531
(98 %)
7 diff
(98.7 %id)
AI333869 lung .a 2166 to 2692 527 to 1       527/536
(98 %)
8 diff
(98.6 %id)
AI142040 pooled .a 2190 to 2692 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
AI590298 Kidney .a 2195 to 2692 496 to 1       496/496
(100 %)
2 diff
(99.6 %id)
AI823662 2 pooled tumors (clear cell type), Kidney .a 2196 to 2647 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AI085980 senescent fibroblast .a 2199 to 2692 494 to 1       494/494
(100 %)
0 diff
(100 %id)
AW611982 Kidney .a 2206 to 2692 487 to 1       487/487
(100 %)
1 diff
(99.8 %id)
AI950982 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 2214 to 2673 460 to 1       460/460
(100 %)
2 diff
(99.6 %id)
H95113 placenta .a 2222 to 2630 414 to 1       414/428
(96 %)
13 diff
(97.0 %id)
N27178 placenta .a 2232 to 2692 460 to 1       460/460
(100 %)
17 diff
(96.4 %id)
AI347688 2 pooled tumors (clear cell type), Kidney .a 2254 to 2674 421 to 1       421/421
(100 %)
0 diff
(100 %id)
EC474576 Prostate .a 2266 to 2370 1 to 104       104/105
(99 %)
2 diff
(98.1 %id)
AI221015 placenta .a 2275 to 2692 418 to 1       418/418
(100 %)
2 diff
(99.6 %id)
BE348263 Kidney .a 2286 to 2691 406 to 1       406/406
(100 %)
0 diff
(100 %id)
BE159351 head_neck .a 2320 to 2485 168 to 3     Submitted on the opposite strand 166/168
(98 %)
0 diff
(100 %id)
AI951302 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 2323 to 2466 145 to 1       145/145
(100 %)
2 diff
(98.7 %id)
TI_157598421   .a 2330 to 2692 411 to 49       363/1082
(33 %)
0 diff
(100 %id)
AI783632 Kidney .a 2346 to 2692 349 to 1       349/349
(100 %)
7 diff
(98.0 %id)
AI280030 pooled .a 2355 to 2692 338 to 1       338/338
(100 %)
0 diff
(100 %id)
AI189361 placenta .a 2373 to 2692 321 to 1       321/321
(100 %)
2 diff
(99.4 %id)
AI200223 placenta .a 2392 to 2674 283 to 1       283/283
(100 %)
0 diff
(100 %id)
AW080875 colon, moderately differentiated adenocarcinoma .a 2408 to 2680 273 to 1       273/296
(92 %)
3 diff
(99.0 %id)
AV701792 adrenal gland .a 2535 to 3259 1 to 718       718/720
(99 %)
28 diff
(96.2 %id)
AK075457 placenta .a 2783 to 5041 1 to 2259       2259/2259
(100 %)
2 diff
(100.0 %id)
DA831716 placenta .a 2784 to 3463 2 to 680   capped   679/680
(99 %)
4 diff
(99.5 %id)
AF140240   .a 2994 to 5042 1 to 2049   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2049/2049
(100 %)
1 diff
(100.0 %id)
DA012536 adrenal gland .a 3140 to 3700 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA570207 whole embryo, mainly head .a 3175 to 3965 2 to 792   capped   791/791
(100 %)
8 diff
(99.0 %id)
AI189538 placenta .a 3215 to 3700 1 to 486     Submitted on the opposite strand 486/486
(100 %)
1 diff
(99.8 %id)
AI186625 placenta .a 3216 to 3676 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
AI220883 placenta .a 3216 to 3601 1 to 386     Submitted on the opposite strand 386/386
(100 %)
0 diff
(100 %id)
AI278297 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3216 to 3584 1 to 369     Submitted on the opposite strand 369/369
(100 %)
6 diff
(98.4 %id)
AI470396 pooled .a 3216 to 3539 1 to 324     Submitted on the opposite strand 324/324
(100 %)
0 diff
(100 %id)
BF114851 fibrotheoma, ovary .a 3216 to 3780 1 to 565     Submitted on the opposite strand 565/574
(98 %)
1 diff
(99.9 %id)
BF055001 pooled .a 3216 to 3675 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
TI_154002383   .a 3216 to 3784 80 to 660     Submitted on the opposite strand 581/679
(85 %)
19 diff
(97.3 %id)
TI_157612117   .a 3216 to 3706 60 to 550     Submitted on the opposite strand 491/553
(88 %)
14 diff
(97.5 %id)
BF437290 Prostate .a 3225 to 3799 1 to 575     Submitted on the opposite strand 575/575
(100 %)
0 diff
(100 %id)
AI081087 senescent fibroblast .a 3234 to 3560 1 to 329     Submitted on the opposite strand 329/330
(99 %)
10 diff
(97.0 %id)
BE044533 pooled .a 3234 to 3822 1 to 589     Submitted on the opposite strand 589/589
(100 %)
2 diff
(99.7 %id)
BF439958 brain, glioblastoma (pooled) .a 3234 to 3705 1 to 472     Submitted on the opposite strand 472/472
(100 %)
1 diff
(99.8 %id)
R22195 placenta .a 3240 to 3723 1 to 479     Submitted on the opposite strand 479/484
(98 %)
23 diff
(95.3 %id)
R68580 placenta .a 3240 to 3561 1 to 321     Submitted on the opposite strand 321/345
(93 %)
7 diff
(98.0 %id)
N30298 placenta .a 3240 to 3789 1 to 543     Submitted on the opposite strand 543/543
(100 %)
18 diff
(96.7 %id)
N27100 placenta .a 3240 to 3683 1 to 453     Submitted on the opposite strand 453/457
(99 %)
19 diff
(95.9 %id)
N29712 placenta .a 3240 to 3854 1 to 615     Submitted on the opposite strand 615/620
(99 %)
27 diff
(95.7 %id)
AI085988 senescent fibroblast .a 3240 to 3676 1 to 437     Submitted on the opposite strand 437/437
(100 %)
1 diff
(99.8 %id)
AI126102 placenta .a 3240 to 3701 1 to 462     Submitted on the opposite strand 462/462
(100 %)
1 diff
(99.8 %id)
AI151447 uterus .a 3240 to 3702 1 to 463     Submitted on the opposite strand 463/463
(100 %)
3 diff
(99.4 %id)
N26841 placenta .a 3243 to 3672 1 to 429     Submitted on the opposite strand 429/433
(99 %)
12 diff
(97.3 %id)
AI200118 placenta .a 3250 to 3636 1 to 387     Submitted on the opposite strand 387/387
(100 %)
0 diff
(100 %id)
AI209174 placenta .a 3250 to 3684 1 to 435     Submitted on the opposite strand 435/435
(100 %)
1 diff
(99.8 %id)
AI935171 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3251 to 3702 1 to 452     Submitted on the opposite strand 452/452
(100 %)
3 diff
(99.4 %id)
R63708 placenta .a 3252 to 3685 1 to 439     Submitted on the opposite strand 439/439
(100 %)
10 diff
(97.8 %id)
W73598 heart .a 3252 to 3672 1 to 420     Submitted on the opposite strand 420/424
(99 %)
9 diff
(97.9 %id)
AA042880 uterus .a 3252 to 3637 1 to 387     Submitted on the opposite strand 387/389
(99 %)
6 diff
(98.5 %id)
AA526470 normal prostate, Prostate .a 3252 to 3820 1 to 564     Submitted on the opposite strand 564/565
(99 %)
30 diff
(94.7 %id)
AA662965 normal prostate, Prostate .a 3252 to 3750 1 to 499     Submitted on the opposite strand 499/499
(100 %)
4 diff
(99.2 %id)
AA661763 normal prostate, Prostate .a 3252 to 3717 1 to 466     Submitted on the opposite strand 466/467
(99 %)
8 diff
(98.3 %id)
AA906491 pooled .a 3252 to 3542 1 to 290     Submitted on the opposite strand 290/290
(100 %)
2 diff
(99.4 %id)
AA923301 pooled germ cell tumors .a 3252 to 3750 1 to 496     Submitted on the opposite strand 496/496
(100 %)
7 diff
(98.6 %id)
AI004151 breast .a 3252 to 3735 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
AI183433 placenta .a 3252 to 3672 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
AI206532 placenta .a 3252 to 3711 1 to 461     Submitted on the opposite strand 461/461
(100 %)
2 diff
(99.6 %id)
AI217505 pooled .a 3252 to 3684 1 to 433     Submitted on the opposite strand 433/433
(100 %)
2 diff
(99.6 %id)
AI278295 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3252 to 3629 1 to 378     Submitted on the opposite strand 378/378
(100 %)
1 diff
(99.8 %id)
AI797922 pooled .a 3252 to 3700 1 to 450     Submitted on the opposite strand 450/450
(100 %)
3 diff
(99.4 %id)
AI743031 pooled .a 3252 to 3746 1 to 493     Submitted on the opposite strand 493/493
(100 %)
6 diff
(98.8 %id)
AI863870 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3252 to 3668 1 to 417     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
AW188061 pooled .a 3252 to 3738 1 to 487     Submitted on the opposite strand 487/487
(100 %)
4 diff
(99.2 %id)
AW592770 pooled .a 3252 to 3583 1 to 332     Submitted on the opposite strand 332/332
(100 %)
4 diff
(98.8 %id)
AI692884 pooled .a 3258 to 3728 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
R26755 placenta .a 3262 to 3544 1 to 283     Submitted on the opposite strand 283/284
(99 %)
6 diff
(97.9 %id)
R76684 placenta .a 3263 to 3695 1 to 436     Submitted on the opposite strand 436/436
(100 %)
8 diff
(98.2 %id)
BF589628 Prostate .a 3263 to 3452 1 to 190     Submitted on the opposite strand 190/190
(100 %)
6 diff
(96.9 %id)
R65835 placenta .a 3264 to 3630 1 to 376     Submitted on the opposite strand 376/390
(96 %)
20 diff
(94.9 %id)
H00963 placenta .a 3264 to 3548 13 to 297     Submitted on the opposite strand 285/298
(95 %)
4 diff
(98.7 %id)
H94603 placenta .a 3267 to 3544 1 to 277     Submitted on the opposite strand 277/278
(99 %)
5 diff
(98.3 %id)
R77510 placenta .a 3273 to 3589 1 to 321     Submitted on the opposite strand 321/324
(99 %)
10 diff
(97.0 %id)
H01664 placenta .a 3275 to 3686 1 to 425     Submitted on the opposite strand 425/425
(100 %)
23 diff
(94.6 %id)
R81813 placenta .a 3281 to 3589 1 to 311     Submitted on the opposite strand 311/314
(99 %)
8 diff
(97.5 %id)
AA927417 pooled germ cell tumors .a 3290 to 3749 1 to 458     Submitted on the opposite strand 458/458
(100 %)
6 diff
(98.7 %id)
N42022 placenta .a 3295 to 3855 574 to 17   AAA Submitted on the opposite strand 558/558
(100 %)
24 diff
(95.7 %id)
AA872822 Kidney .a 3298 to 3585 1 to 289     Submitted on the opposite strand 289/290
(99 %)
10 diff
(96.6 %id)
AF074999   .a 3306 to 3865 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
AA927465 pooled .a 3341 to 3443 1 to 103     Submitted on the opposite strand 103/103
(100 %)
5 diff
(95.2 %id)
AV752907 Pituitary .a 3359 to 3850 1 to 491       491/498
(98 %)
12 diff
(97.6 %id)
AV701504 adrenal gland .a 3362 to 3920 1 to 559       559/711
(78 %)
4 diff
(99.5 %id)
H94782 placenta .a 3363 to 3846 526 to 38     Submitted on the opposite strand 489/528
(92 %)
0 diff
(100 %id)
N56720 placenta .a 3372 to 3850 481 to 1     Submitted on the opposite strand 481/490
(98 %)
10 diff
(98.0 %id)
CF139651 CNCAP(3)T-225 cell line, Prostate .a 3393 to 3734 1 to 342       342/342
(100 %)
4 diff
(98.9 %id)
CF140804 CNCAP(3)T-225 cell line, Prostate .a 3393 to 3731 1 to 339       339/339
(100 %)
8 diff
(97.7 %id)
EC488399 Prostate .a 3397 to 3501 8 to 112       105/112
(93 %)
0 diff
(100 %id)
W73637 heart .a 3399 to 3850 458 to 1     Submitted on the opposite strand 458/459
(99 %)
9 diff
(98.1 %id)
TI_154169911   .a 3400 to 3949 80 to 632       553/601
(92 %)
21 diff
(96.6 %id)
DA836193 placenta .a 3409 to 3931 2 to 527   capped   526/526
(100 %)
5 diff
(99.1 %id)
BU146532 brain, neuroblastoma, cell line .a 3415 to 4044 1 to 643       643/887
(72 %)
21 diff
(97.7 %id)
AI374773   .a 3419 to 3870 452 to 1       452/452
(100 %)
0 diff
(100 %id)
T48941 placenta .a 3433 to 3710 9 to 290       282/293
(96 %)
7 diff
(97.7 %id)
AA665521   .a 3434 to 3684 1 to 247     Submitted on the opposite strand 247/248
(99 %)
9 diff
(96.4 %id)
R76359 placenta .a 3448 to 3715 307 to 35     Submitted on the opposite strand 273/309
(88 %)
0 diff
(100 %id)
BG536329 lung .a 3485 to 4257 1 to 777       777/777
(100 %)
24 diff
(97.0 %id)
R81917 placenta .a 3489 to 3850 368 to 1     Submitted on the opposite strand 368/370
(99 %)
7 diff
(98.2 %id)
AW600303 lung, Pancreas .a 3495 to 3865 1 to 371   AAA Submitted on the opposite strand 371/372
(99 %)
1 diff
(99.8 %id)
N41599 placenta .a 3518 to 3852 334 to 1     Submitted on the opposite strand 334/345
(96 %)
8 diff
(97.7 %id)
H01663 placenta .a 3520 to 3851 338 to 1     Submitted on the opposite strand 338/435
(77 %)
8 diff
(98.2 %id)
EC580595 Prostate .a 3525 to 3641 1 to 113       113/113
(100 %)
7 diff
(93.9 %id)
AA043005 uterus .a 3526 to 3853 334 to 1     Submitted on the opposite strand 334/334
(100 %)
8 diff
(97.7 %id)
CF144094 lymph .a 3527 to 3908 8 to 389       382/389
(98 %)
6 diff
(98.5 %id)
CF121628 lymph .a 3527 to 4185 8 to 665       658/665
(98 %)
6 diff
(99.1 %id)
TI_154175945   .a 3527 to 3927 80 to 480       401/402
(99 %)
5 diff
(98.8 %id)
TI_154180820   .a 3527 to 4356 76 to 899       824/824
(100 %)
16 diff
(98.1 %id)
CR618062 placenta .a 3531 to 4841 1 to 1311       1311/1311
(100 %)
0 diff
(100 %id)
AL542870 placenta .a 3531 to 4424 1 to 892       892/903
(98 %)
3 diff
(99.7 %id)
N40507 placenta .a 3540 to 3850 311 to 1     Submitted on the opposite strand 311/311
(100 %)
1 diff
(99.7 %id)
TI_149299447   .a 3561 to 4358 883 to 90   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 794/957
(82 %)
8 diff
(99.2 %id)
R68916 placenta .a 3564 to 3943 1 to 378       378/384
(98 %)
2 diff
(99.5 %id)
R22246 placenta .a 3592 to 3851 264 to 1     Submitted on the opposite strand 264/266
(99 %)
5 diff
(98.2 %id)
CN364199 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3608 to 4382 1 to 777       777/777
(100 %)
5 diff
(99.4 %id)
CB850760 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3673 to 4358 702 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 686/686
(100 %)
1 diff
(99.9 %id)
BG482606 lung .a 3685 to 4333 1 to 655       655/807
(81 %)
29 diff
(96.5 %id)
BF369180 placenta_normal .a 3796 to 4048 1 to 252       252/252
(100 %)
3 diff
(98.9 %id)
BF369183 placenta_normal .a 3796 to 4048 253 to 1       253/253
(100 %)
0 diff
(100 %id)
BF369184 placenta_normal .a 3796 to 4048 1 to 252       252/252
(100 %)
2 diff
(99.3 %id)
W23474 parathyroid gland, parathyroid tumor .a 3836 to 4357 524 to 2     Submitted on the opposite strand 523/524
(99 %)
0 diff
(100 %id)
BG402885 bladder, transitional cell papilloma, cell line .a 3843 to 4651 1 to 797       797/959
(83 %)
23 diff
(97.7 %id)
EC468594 Prostate .a 3851 to 3963 1 to 113       113/113
(100 %)
4 diff
(96.5 %id)
AA634120 lung .a 3860 to 4328 469 to 1       469/469
(100 %)
1 diff
(99.8 %id)
R64501 placenta .a 3881 to 4249 1 to 373       373/373
(100 %)
9 diff
(97.6 %id)
H00784 placenta .a 3885 to 4226 1 to 350   fully sequenced,   350/350
(100 %)
5 diff
(98.6 %id)
CB987762 Pooled-Glandular .a 3944 to 4638 1 to 704       704/850
(82 %)
21 diff
(97.6 %id)
W47288 senescent fibroblast .a 3947 to 4417 473 to 1     Submitted on the opposite strand 473/476
(99 %)
2 diff
(99.6 %id)
BF367905 placenta_normal .a 3955 to 4346 408 to 17       392/408
(96 %)
0 diff
(100 %id)
AI825198 pooled germ cell tumors .a 3962 to 4359 399 to 2       398/399
(99 %)
0 diff
(100 %id)
AI268018 carcinoid, lung .a 3969 to 4357 391 to 2       390/391
(99 %)
0 diff
(100 %id)
C16896   .a 3986 to 4346 1 to 359       359/377
(95 %)
10 diff
(97.4 %id)
BQ188072 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3987 to 4358 1 to 372   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 372/372
(100 %)
0 diff
(100 %id)
AV702218 adrenal gland .a 4004 to 4328 1 to 325   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 325/325
(100 %)
1 diff
(99.7 %id)
T48942 placenta .a 4011 to 4330 324 to 1       324/329
(98 %)
6 diff
(98.2 %id)
DA911985   .a 4013 to 4488 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
CN364198 embryonic stem cells, DMSO-treated H9 cellline .a 4028 to 4311 1 to 284       284/284
(100 %)
0 diff
(100 %id)
R63755 placenta .a 4033 to 4354 324 to 1     Submitted on the opposite strand 324/336
(96 %)
4 diff
(98.9 %id)
AL542869 placenta .a 4040 to 5023 983 to 1       983/983
(100 %)
22 diff
(97.8 %id)
CN364200 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4045 to 4743 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
R67452 placenta .a 4082 to 4363 304 to 19     Submitted on the opposite strand 286/308
(92 %)
0 diff
(100 %id)
BG001503 placenta_normal .a 4085 to 4325 260 to 21       240/260
(92 %)
8 diff
(97.0 %id)
BF995129 placenta_normal .a 4086 to 4310 1 to 224       224/224
(100 %)
9 diff
(96.0 %id)
BQ373362 prostate_tumor .a 4086 to 4461 416 to 39       378/416
(90 %)
6 diff
(98.6 %id)
BM998908 lung, Lung Focal Fibrosis .a 4099 to 4801 1 to 703     Submitted on the opposite strand 703/703
(100 %)
7 diff
(99.1 %id)
BM994455 lung, Metastatic Chondrosarcoma .a 4105 to 4781 1 to 675     Submitted on the opposite strand 675/675
(100 %)
6 diff
(99.2 %id)
CN364201 embryonic stem cells, DMSO-treated H9 cellline .a 4106 to 4356 261 to 11   AAA Submitted on the opposite strand 251/251
(100 %)
3 diff
(98.9 %id)
R86118 breast .a 4136 to 4487 1 to 355       355/358
(99 %)
5 diff
(98.7 %id)
N89333   .a 4136 to 4329 1 to 193       193/196
(98 %)
9 diff
(95.5 %id)
CF141144 CNCAP(3)T-225 cell line, Prostate .a 4140 to 4608 2 to 470       469/470
(99 %)
8 diff
(98.3 %id)
TI_154171856   .a 4146 to 4705 80 to 642       563/563
(100 %)
16 diff
(97.2 %id)
BQ224956 epithelioid carcinoma, Pancreas .a 4176 to 5030 861 to 1     Submitted on the opposite strand 861/862
(99 %)
12 diff
(98.7 %id)
R25945 placenta .a 4190 to 4444 263 to 1     Submitted on the opposite strand 263/263
(100 %)
10 diff
(96.2 %id)
H00686 placenta .a 4196 to 4341 160 to 1   fully sequenced,   160/160
(100 %)
1 diff
(99.4 %id)
TI_159700507   .a 4201 to 5041 961 to 132   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 830/995
(83 %)
13 diff
(98.7 %id)
AW805044 uterus .a 4215 to 4345 12 to 141       130/141
(92 %)
6 diff
(95.8 %id)
BM853095 Ascites, stomach .a 4225 to 4739 1 to 515       515/523
(98 %)
1 diff
(99.9 %id)
EC466452 Prostate .a 4231 to 4319 102 to 15       88/102
(86 %)
0 diff
(100 %id)
TI_149309743   .a 4243 to 5041 876 to 84   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 793/969
(81 %)
6 diff
(99.4 %id)
W52495 senescent fibroblast .a 4247 to 4721 1 to 476       476/501
(95 %)
3 diff
(99.5 %id)
BU688119 lung .a 4270 to 5041 788 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 770/773
(99 %)
2 diff
(99.8 %id)
BQ356274 head_neck .a 4286 to 4826 536 to 1       536/542
(98 %)
12 diff
(97.8 %id)
AV702518 adrenal gland .a 4291 to 4662 1 to 372       372/372
(100 %)
0 diff
(100 %id)
BX451414 placenta .a 4308 to 4807 1 to 502       502/538
(93 %)
14 diff
(97.4 %id)
BQ015077 Chondrosarcoma, Left Pubic Bone .a 4334 to 5041 726 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 708/708
(100 %)
0 diff
(100 %id)
BG434570 placenta .a 4338 to 5028 1 to 670       670/709
(94 %)
38 diff
(94.7 %id)
BQ356271 head_neck .a 4353 to 4820 462 to 1       462/462
(100 %)
14 diff
(97.0 %id)
BG434374 placenta .a 4356 to 5007 1 to 649       649/649
(100 %)
4 diff
(99.4 %id)
R24236 placenta .a 4381 to 4758 1 to 382     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 382/434
(88 %)
20 diff
(95.4 %id)
AA248661   .a 4391 to 4543 1 to 153       153/153
(100 %)
0 diff
(100 %id)
T94647 lung .a 4395 to 4706 1 to 323   fully sequenced,   323/323
(100 %)
8 diff
(97.6 %id)
AI806338 pooled .a 4421 to 5041 625 to 5       621/625
(99 %)
0 diff
(100 %id)
DB356955 whole embryo, mainly head .a 4475 to 5041 564 to 1       564/568
(99 %)
25 diff
(95.6 %id)
DB361096 mammary gland .a 4485 to 5041 556 to 1       556/567
(98 %)
20 diff
(96.5 %id)
BF439598 pooled .a 4492 to 5041 565 to 16   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 550/550
(100 %)
7 diff
(98.8 %id)
AV707723 adrenal gland .a 4497 to 5035 640 to 103     Submitted on the opposite strand 538/651
(82 %)
0 diff
(100 %id)
AI093988 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4501 to 4845 353 to 9       345/353
(97 %)
0 diff
(100 %id)
AI096922 uterus .a 4504 to 4845 350 to 9       342/350
(97 %)
0 diff
(100 %id)
AI129550 uterus .a 4504 to 4845 350 to 9       342/350
(97 %)
0 diff
(100 %id)
AA701075 pineal gland .a 4536 to 5036 501 to 1       501/501
(100 %)
6 diff
(98.9 %id)
AA736428 pineal gland .a 4548 to 5041 499 to 6       494/499
(98 %)
0 diff
(100 %id)
DB377518 placenta .a 4551 to 5041 489 to 1       489/489
(100 %)
14 diff
(97.2 %id)
W21203 lung .a 4555 to 4724 1 to 170       170/171
(99 %)
2 diff
(98.9 %id)
AA570705 adrenal adenoma, adrenal gland .a 4563 to 5041 487 to 9       479/487
(98 %)
0 diff
(100 %id)
BG623634 placenta .a 4566 to 5041 1 to 468   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 468/468
(100 %)
12 diff
(97.5 %id)
AI453581 pooled .a 4573 to 5041 476 to 8       469/476
(98 %)
0 diff
(100 %id)
AI458255 pooled .a 4580 to 5041 465 to 5       461/465
(99 %)
0 diff
(100 %id)
EC529874 Prostate .a 4582 to 4711 1 to 126       126/126
(100 %)
4 diff
(96.9 %id)
AI457566 pooled .a 4599 to 5041 448 to 6       443/448
(98 %)
0 diff
(100 %id)
CK299168 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4604 to 5041 456 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 438/456
(96 %)
4 diff
(99.2 %id)
TI_151809285   .a 4604 to 5041 88 to 523   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 436/445
(97 %)
6 diff
(98.7 %id)
AI719385 colon .a 4605 to 5034 430 to 1       430/430
(100 %)
8 diff
(98.2 %id)
BM997578 lung, Metastatic Chondrosarcoma .a 4608 to 5041 452 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 434/434
(100 %)
0 diff
(100 %id)
AI285014 adenocarcinoma, colon .a 4613 to 5041 429 to 1       429/429
(100 %)
8 diff
(98.2 %id)
TI_151729900   .a 4641 to 5041 479 to 79   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 401/401
(100 %)
2 diff
(99.6 %id)
AA936215 adenocarcinoma, colon .a 4651 to 5041 391 to 1       391/391
(100 %)
2 diff
(99.5 %id)
T94297 lung .a 4676 to 5042 377 to 1   fully sequenced,   377/377
(100 %)
9 diff
(97.7 %id)
AW204986   .a 4700 to 5041 359 to 18   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 342/345
(99 %)
8 diff
(97.7 %id)
BF447203 Prostate .a 4704 to 5041 338 to 1       338/338
(100 %)
0 diff
(100 %id)
AI224116 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4707 to 5041 338 to 4       335/338
(99 %)
0 diff
(100 %id)
AI224117 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4707 to 5041 338 to 4       335/338
(99 %)
0 diff
(100 %id)
AI288574 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4707 to 5041 338 to 4       335/338
(99 %)
0 diff
(100 %id)
AI367030 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4707 to 5041 342 to 8       335/342
(97 %)
0 diff
(100 %id)
BI004649 head_normal .a 4726 to 4943 223 to 1       223/224
(99 %)
17 diff
(92.5 %id)
AI208732   .a 4726 to 5041 324 to 8       317/324
(97 %)
0 diff
(100 %id)
AI499622 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 4726 to 5041 325 to 10       316/325
(97 %)
0 diff
(100 %id)
BF369311 placenta_normal .a 4733 to 4885 155 to 1       155/155
(100 %)
7 diff
(95.5 %id)
AI199409 Prostate .a 4740 to 5041 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AI685829 Prostate .a 4740 to 5041 303 to 2       302/303
(99 %)
0 diff
(100 %id)
AI620216 Prostate .a 4740 to 5041 303 to 2       302/303
(99 %)
0 diff
(100 %id)
AI826663 normal prostate, Prostate .a 4740 to 5041 304 to 3       302/304
(99 %)
0 diff
(100 %id)
BF476331 Prostate .a 4740 to 5041 303 to 2       302/303
(99 %)
0 diff
(100 %id)
BF446270 Prostate .a 4740 to 5041 303 to 2       302/303
(99 %)
0 diff
(100 %id)
BF446407 Prostate .a 4740 to 5041 303 to 2       302/303
(99 %)
0 diff
(100 %id)
AI675631 Prostate .a 4746 to 5041 310 to 15   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 296/433
(68 %)
0 diff
(100 %id)
R68811 placenta .a 4811 to 5043 237 to 5       233/237
(98 %)
0 diff
(100 %id)
N92992 lung .a 4812 to 5041 237 to 8       230/237
(97 %)
0 diff
(100 %id)
FN063485 breast carcinoma .a 4816 to 4887 72 to 1     Submitted on the opposite strand 72/73
(98 %)
0 diff
(100 %id)
FN052071 breast carcinoma .a 4823 to 4913 1 to 90       90/91
(98 %)
2 diff
(97.9 %id)
T39510 placenta .a 4823 to 5038 1 to 216       216/216
(100 %)
1 diff
(99.6 %id)
AW000727 Prostate .a 4828 to 5039 215 to 4       212/215
(98 %)
0 diff
(100 %id)
R24237 placenta .a 4849 to 5041 204 to 12   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 193/193
(100 %)
1 diff
(99.5 %id)
FN150580 breast carcinoma .a 4868 to 4937 1 to 67       67/67
(100 %)
3 diff
(95.6 %id)
AI984442 Kidney .a 4881 to 5024 144 to 1       144/144
(100 %)
1 diff
(99.4 %id)
AA873744 Kidney .a 4906 to 5041 141 to 6       136/141
(96 %)
0 diff
(100 %id)
AK054604   .b 1 to 1838 1 to 1841   tiling clone, available from FLJ,   1841/1841
(100 %)
4 diff
(99.8 %id)
NM_005996.3   .b 1 to 4723 1 to 4723 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 4723/4723
(100 %)
0 diff
(100 %id)
DA001381   .b 2 to 500 2 to 505   capped   504/505
(99 %)
8 diff
(98.5 %id)
DA831216 placenta .b 4 to 448 2 to 449   tiling clone, capped   448/448
(100 %)
6 diff
(98.7 %id)
AF170708   .b 704 to 3136 1 to 2429   tiling clone,   2429/2429
(100 %)
15 diff
(99.4 %id)
AF002228 Kidney .b 965 to 2369 1 to 1405       1405/1405
(100 %)
1 diff
(100.0 %id)
AI888845 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1202 to 1838 637 to 1       637/637
(100 %)
2 diff
(99.7 %id)
BU954706 mixed (pool of 40 RNAs) .b 1283 to 1757 1 to 475       475/511
(92 %)
4 diff
(99.3 %id)
DB294970   .b 1289 to 1838 550 to 1       550/550
(100 %)
1 diff
(99.9 %id)
DB376764 placenta .b 1352 to 1838 484 to 1       484/512
(94 %)
9 diff
(98.3 %id)
BF476252 Prostate .b 1370 to 1833 464 to 1       464/464
(100 %)
4 diff
(99.2 %id)
AI347170 colon, colon tumor, RER+ .b 1397 to 1833 437 to 1       437/437
(100 %)
7 diff
(98.4 %id)
AW043789 pooled .b 1416 to 1844 429 to 1       429/429
(100 %)
1 diff
(99.8 %id)
AI202681 Prostate .b 1469 to 1831 363 to 1       363/363
(100 %)
2 diff
(99.5 %id)
BF002728 Prostate .b 1469 to 1830 362 to 1       362/362
(100 %)
0 diff
(100 %id)
BI045312 prostate_normal .b 1473 to 1772 5 to 305       301/342
(88 %)
13 diff
(96.2 %id)
AY034105   .b 1513 to 1844 1 to 326   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 326/327
(99 %)
9 diff
(97.3 %id)
AK304639 uterus .c 1 to 1813 2 to 1814 exact tiling clone,   1814/1814
(100 %)
0 diff
(100 %id)
AI347976 adenocarcinoma, colon .c 459 to 943 485 to 1       485/485
(100 %)
0 diff
(100 %id)
BF969674 adrenal cortex carcinoma, cell line, adrenal gland .c 632 to 1256 8 to 630   AAA   623/630
(98 %)
6 diff
(99.1 %id)
BU752906 placenta .c 862 to 1351 507 to 18   AAA   490/490
(100 %)
0 diff
(100 %id)
CN281423 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1235 to 1653 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
CN364197 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d-u 1 to 444 1 to 444   tiling clone,   444/444
(100 %)
0 diff
(100 %id)
AI015793   .d-u 13 to 398 386 to 1       386/386
(100 %)
5 diff
(98.8 %id)
AI762596 colon, colon tumor, RER+ .d-u 64 to 538 475 to 1   tiling clone,   475/475
(100 %)
0 diff
(100 %id)
AW612631 Kidney .d-u 100 to 574 476 to 1 R118C A139S P140A L141A T142H ... tiling clone,   476/476
(100 %)
3 diff
(99.4 %id)
AK130978 adrenal gland .e-u 1 to 469 1 to 469   tiling clone, available from FLJ,   469/469
(100 %)
0 diff
(100 %id)
BX118646 placenta .e-u 18 to 605 25 to 613 D93E W96L G97X R98K R99K ... tiling clone,   589/617
(95 %)
5 diff
(99.2 %id)
N57434 placenta .e-u 72 to 450 1 to 379       379/379
(100 %)
2 diff
(99.5 %id)
N32341 placenta .e-u 598 to 1072 473 to 1   tiling clone,   473/474
(99 %)
7 diff
(98.6 %id)
AW242754 Kidney .e-u 632 to 1072 441 to 1   tiling clone,   441/441
(100 %)
6 diff
(98.7 %id)
AA993149   .e-u 686 to 1077 393 to 3       391/393
(99 %)
0 diff
(100 %id)
CB048971 Prostate .e-u 854 to 1090 10 to 246   fully sequenced,   237/246
(96 %)
6 diff
(97.6 %id)
BG055137 Prostate .e-u 868 to 1098 231 to 1   tiling clone,   231/231
(100 %)
0 diff
(100 %id)
AI682448 Prostate .e-u 887 to 1072 186 to 1       186/186
(100 %)
2 diff
(99.0 %id)
CB048970 Prostate .e-u 899 to 1090 192 to 1   fully sequenced,   192/192
(100 %)
0 diff
(100 %id)
BF003025 Prostate .f 1 to 481 497 to 17 exact tiling clone,   481/497
(96 %)
0 diff
(100 %id)
DW423501 Liver .h-u 1 to 275 17 to 291 exact tiling clone,   275/291
(94 %)
6 diff
(98.0 %id)
AV707223 adrenal gland Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
AV708429 adrenal gland Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
AF216750 adrenal gland Gene TBX3, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BI046436 prostate_normal Gene TBX3, variant not shown              
DB318182   Gene TBX3, variant not shown         This clone was ignored    
DA543688   Gene TBX3, variant not shown       capped This clone was ignored    
DA595426 lung Gene TBX3, variant not shown       capped Suspected internal deletion, this clone was ignored    
N94306 senescent fibroblast Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
W46945 senescent fibroblast Gene TBX3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AI041766 senescent fibroblast Gene TBX3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AI149007 placenta Gene TBX3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AI184952 lung Gene TBX3, variant not shown         This clone was ignored    
AI739086 colon, colon tumor, RER+ Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
BG760827 melanotic melanoma, high MDR (cell line), skin Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
BM771531 Ascites, stomach Gene TBX3, variant not shown         Suspected internal deletion, this clone was ignored    
TI_157599660   Gene TBX3, variant not shown       AAA Submitted on the opposite strand, submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u, .f, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI