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Gene TBL1XTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
611 supporting clones for gene TBL1X back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
Y12781   .a 1 to 5872 1 to 5875 exact tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 5875/5875
(100 %)
13 diff
(99.8 %id)
BC052304 Pancreas, epithelioid carcinoma .a 161 to 2730 1 to 2570 exact available from MGC, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 2570/2570
(100 %)
0 diff
(100 %id)
NM_005647.3   .a 161 to 5875 1 to 5715 exact RefSeq,   5715/5715
(100 %)
0 diff
(100 %id)
BQ962823 epithelioid carcinoma cell line, Pancreas .a 162 to 518 1 to 357       357/1012
(35 %)
3 diff
(99.8 %id)
CN293665 embryonic stem cells, cell lines H1, H7, andH9 .a 373 to 592 1 to 220       220/220
(100 %)
0 diff
(100 %id)
NM_001139466.1   .b 1 to 5595 2 to 5596 exact RefSeq,   5596/5596
(100 %)
0 diff
(100 %id)
DA740125   .b 1 to 517 2 to 518   tiling clone, capped   517/517
(100 %)
0 diff
(100 %id)
AK290962   .b 17 to 2117 1 to 2101 T390A tiling clone,   2101/2101
(100 %)
2 diff
(100.0 %id)
DA698459   .b 18 to 509 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA609519   .b 24 to 519 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
BP244061 Liver .b 28 to 579 1 to 553       553/570
(97 %)
6 diff
(99.0 %id)
BE170508 head_neck .b 238 to 580 32 to 375       344/409
(84 %)
8 diff
(98.1 %id)
ES310512 scalp interfollicular dermis, skin .b 261 to 816 1 to 559       559/559
(100 %)
9 diff
(98.4 %id)
TI_1948225756   .b 362 to 966 127 to 735       609/1315
(46 %)
44 diff
(96.7 %id)
TI_1948225897   .b 366 to 1308 121 to 1069   tiling clone, fully sequenced,   947/1067
(88 %)
25 diff
(97.7 %id)
EL736098 mixed .b 368 to 981 1 to 614       614/619
(99 %)
1 diff
(99.9 %id)
TI_1948225898   .b 1278 to 2104 952 to 122   tiling clone, fully sequenced,   829/950
(87 %)
7 diff
(99.3 %id)
AB209608 Spleen .c 1 to 4791 1 to 4791 exact tiling clone,   4791/4791
(100 %)
4 diff
(100.0 %id)
DB121051 thymus .c 130 to 689 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB343971 thymus .c 1713 to 2191 479 to 1       479/479
(100 %)
0 diff
(100 %id)
BQ073265 epidermoid carcinoma, cell line, lung .c 3840 to 4664 25 to 856       832/979
(84 %)
19 diff
(98.1 %id)
AA374656 lung .c 3851 to 4126 1 to 278       278/278
(100 %)
4 diff
(98.6 %id)
AA100341   .c 3851 to 4130 1 to 283       283/283
(100 %)
4 diff
(98.6 %id)
DA570911 whole embryo, mainly head .c 3852 to 4638 2 to 797   capped   796/796
(100 %)
16 diff
(98.0 %id)
AA486127 lung .c 3854 to 4147 1 to 291       291/291
(100 %)
4 diff
(98.7 %id)
AA057288 uterus .c 3856 to 4056 1 to 201       201/201
(100 %)
0 diff
(100 %id)
AA232808 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3856 to 4190 1 to 334       334/334
(100 %)
7 diff
(98.0 %id)
AW956014   .c 3858 to 4438 1 to 577       577/579
(99 %)
16 diff
(97.3 %id)
CB117741 brain .c 3866 to 4023 1 to 157       157/157
(100 %)
1 diff
(99.4 %id)
CB117694 brain .c 3867 to 4102 1 to 236       236/236
(100 %)
2 diff
(99.2 %id)
BX401184   .c 3872 to 4775 1 to 904       904/912
(99 %)
8 diff
(99.2 %id)
BF307905 muscle, rhabdomyosarcoma .c 3884 to 4616 1 to 730       730/731
(99 %)
12 diff
(98.4 %id)
AA034328 uterus .c 3886 to 4305 1 to 424       424/424
(100 %)
9 diff
(97.9 %id)
BQ188432 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3928 to 4459 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
AA121939 uterus .c 3947 to 4396 9 to 464   fully sequenced,   456/464
(98 %)
16 diff
(96.6 %id)
AA463617 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3947 to 4454 7 to 514   fully sequenced,   508/514
(98 %)
8 diff
(98.5 %id)
TI_57247345   .c 3950 to 4752 20 to 822       803/822
(97 %)
10 diff
(98.8 %id)
BM044124 carcinoma, cell line, Prostate .c 3957 to 4512 1 to 561       561/561
(100 %)
13 diff
(97.7 %id)
TI_57247555   .c 3957 to 4798 33 to 888       856/1012
(84 %)
34 diff
(96.7 %id)
AA279195 germinal center B cell .c 3958 to 4275 1 to 319       319/322
(99 %)
21 diff
(93.5 %id)
BI912409 leukocyte .c 3958 to 4752 1 to 794       794/794
(100 %)
5 diff
(99.4 %id)
BI912464 leukocyte .c 3958 to 4785 1 to 843       843/848
(99 %)
31 diff
(96.4 %id)
BQ108567 carcinoma, cell line, Prostate .c 3958 to 4696 1 to 738       738/738
(100 %)
6 diff
(99.2 %id)
BQ958629 carcinoma, cell line, Prostate .c 3959 to 4921 1 to 959       959/1052
(91 %)
16 diff
(98.5 %id)
BU552490 carcinoma, cell line, Prostate .c 3959 to 4856 1 to 904   tiling clone,   904/904
(100 %)
6 diff
(99.4 %id)
CB123392 Liver .c 3961 to 4588 1 to 625       625/625
(100 %)
8 diff
(98.8 %id)
BE974198 Prostate .c 3977 to 4550 1 to 567       567/620
(91 %)
10 diff
(98.4 %id)
BG337649 leiomyosarcoma cell line, uterus .c 3982 to 4767 1 to 781       781/828
(94 %)
19 diff
(97.8 %id)
TI_151780167   .c 3984 to 4593 80 to 691       612/972
(62 %)
14 diff
(98.6 %id)
TI_151731799   .c 3995 to 4803 829 to 34       796/996
(79 %)
0 diff
(100 %id)
BP377770 uterus .c 4014 to 4517 1 to 500       500/581
(86 %)
14 diff
(97.6 %id)
TI_154133877   .c 4067 to 4803 790 to 47       744/1355
(54 %)
0 diff
(100 %id)
BY996943   .c 4109 to 4748 10 to 649       640/649
(98 %)
11 diff
(98.4 %id)
BQ923693 epidermoid carcinoma, cell line, lung .c 4110 to 5034 1 to 937       937/948
(98 %)
47 diff
(95.1 %id)
CN293666 embryonic stem cells, DMSO-treated H9 cellline .c 4116 to 4462 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
BF663523 B-cells, primary B-cells from tonsils (cell line) .c 4125 to 4890 1 to 754       754/1054
(71 %)
24 diff
(97.8 %id)
BP430267   .c 4130 to 4441 1 to 318       318/318
(100 %)
9 diff
(97.2 %id)
BU580963 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .c 4136 to 4752 1 to 618       618/618
(100 %)
4 diff
(99.4 %id)
BU941914 mixed (pool of 40 RNAs) .c 4137 to 4474 1 to 347       347/744
(46 %)
11 diff
(98.6 %id)
BX951415   .c 4148 to 4824 1 to 677       677/677
(100 %)
0 diff
(100 %id)
BX091361 liver and spleen .c 4152 to 4877 1 to 726       726/726
(100 %)
2 diff
(99.8 %id)
BU580504 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .c 4153 to 4764 613 to 1       613/613
(100 %)
1 diff
(99.9 %id)
R93893 liver and spleen .c 4153 to 4332 1 to 180       180/180
(100 %)
0 diff
(100 %id)
R67862 placenta .c 4155 to 4488 1 to 345   fully sequenced,   345/345
(100 %)
5 diff
(98.6 %id)
CA776343 Pancreas, Purified pancreatic islet .c 4160 to 4758 599 to 1       599/599
(100 %)
0 diff
(100 %id)
BF593932 pooled .c 4195 to 4733 539 to 1       539/539
(100 %)
0 diff
(100 %id)
AW025094 Kidney .c 4216 to 4733 518 to 1       518/518
(100 %)
1 diff
(99.9 %id)
BI053050 placenta_normal .c 4220 to 4509 335 to 44       292/335
(87 %)
0 diff
(100 %id)
AA234879.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4225 to 4635 15 to 426     also hits gene SVEP1 412/426
(96 %)
10 diff
(97.7 %id)
AA235192 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4225 to 4620 14 to 409       396/409
(96 %)
6 diff
(98.6 %id)
AA234903 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4225 to 4549 14 to 338       325/338
(96 %)
6 diff
(98.3 %id)
AA910953 Kidney .c 4234 to 4733 500 to 1       500/500
(100 %)
0 diff
(100 %id)
BQ187907 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 4236 to 4709 1 to 474       474/474
(100 %)
3 diff
(99.4 %id)
TI_151764108   .c 4237 to 4803 610 to 43       568/968
(58 %)
0 diff
(100 %id)
TI_151705541   .c 4239 to 4803 605 to 44       562/1040
(54 %)
0 diff
(100 %id)
AW975771   .c 4240 to 4803 566 to 3     Submitted on the opposite strand 564/566
(99 %)
0 diff
(100 %id)
AI192780 lung .c 4259 to 4799 541 to 1       541/541
(100 %)
0 diff
(100 %id)
AI813409 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4259 to 4733 475 to 1       475/475
(100 %)
0 diff
(100 %id)
AI824140 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4259 to 4799 541 to 1       541/541
(100 %)
0 diff
(100 %id)
AW084489 colon, colonic mucosa from 3 patients with Crohn'sdisease .c 4259 to 4758 501 to 1       501/501
(100 %)
4 diff
(99.3 %id)
AA928737 adenocarcinoma, colon .c 4269 to 4733 466 to 1       466/466
(100 %)
1 diff
(99.8 %id)
CN293668 embryonic stem cells, DMSO-treated H9 cellline .c 4276 to 4791 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
R00349 liver and spleen .c 4277 to 4570 1 to 301       301/423
(71 %)
10 diff
(97.7 %id)
AI081578 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4279 to 4733 455 to 1       455/456
(99 %)
1 diff
(99.8 %id)
AW072397 pooled .c 4279 to 4733 455 to 1       455/455
(100 %)
0 diff
(100 %id)
FN165663 breast carcinoma .c 4280 to 4377 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
W44973 senescent fibroblast .c 4284 to 4739 1 to 457   fully sequenced,   457/457
(100 %)
1 diff
(99.8 %id)
BQ186907 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 4284 to 4791 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
TI_151732804   .c 4284 to 4803 564 to 45       520/1064
(48 %)
0 diff
(100 %id)
AI147052 heart .c 4291 to 4781 491 to 1       491/491
(100 %)
0 diff
(100 %id)
AI081975 breast .c 4298 to 4776 479 to 1       479/479
(100 %)
1 diff
(99.8 %id)
AI089857 brain, glioblastoma (pooled) .c 4298 to 4641 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AI131528 heart .c 4302 to 4776 475 to 1       475/475
(100 %)
2 diff
(99.6 %id)
AI830807 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4303 to 4733 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI769089 pooled .c 4304 to 4787 485 to 1       485/485
(100 %)
2 diff
(99.6 %id)
AI864427 anaplastic oligodendroglioma, brain .c 4311 to 4733 425 to 1       425/428
(99 %)
10 diff
(97.7 %id)
AA972657 carcinoid, lung .c 4312 to 4733 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AI369219 anaplastic oligodendroglioma, brain .c 4312 to 4733 422 to 1       422/422
(100 %)
0 diff
(100 %id)
BM698395 eye, fetal eyes .c 4314 to 4728 1 to 415     Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 415/415
(100 %)
0 diff
(100 %id)
AW273471 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 4317 to 4799 484 to 2       483/484
(99 %)
0 diff
(100 %id)
AI219522 pooled .c 4318 to 4733 413 to 1       413/413
(100 %)
6 diff
(98.6 %id)
AI292205 carcinoid, lung .c 4320 to 4799 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AI280813 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 4328 to 4790 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AI636315 adenocarcinoma, Pancreas .c 4330 to 4799 471 to 2       470/471
(99 %)
0 diff
(100 %id)
DW465545 Liver .c 4331 to 4671 17 to 357       341/357
(95 %)
6 diff
(98.4 %id)
AI291767 carcinoid, lung .c 4331 to 4781 451 to 1       451/451
(100 %)
3 diff
(99.4 %id)
AI298830 carcinoid, lung .c 4332 to 4733 402 to 1       402/402
(100 %)
0 diff
(100 %id)
AI200243 placenta .c 4333 to 4733 397 to 1       397/397
(100 %)
9 diff
(97.8 %id)
FN136039 breast carcinoma .c 4341 to 4440 1 to 100       100/102
(98 %)
1 diff
(99.1 %id)
AA235305 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4342 to 4733 392 to 1       392/392
(100 %)
1 diff
(99.8 %id)
H87243 eye, retina .c 4343 to 4733 392 to 1       392/392
(100 %)
1 diff
(99.8 %id)
AW085809 esophagus, squamous cell carcinoma .c 4345 to 4799 456 to 2       455/456
(99 %)
0 diff
(100 %id)
AA233863 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4346 to 4768 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AW674814 cervical carcinoma cell line, cervix .c 4346 to 4799 455 to 2       454/455
(99 %)
0 diff
(100 %id)
BM727373 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 4348 to 4794 1 to 447       447/447
(100 %)
0 diff
(100 %id)
TI_151727152   .c 4348 to 4802 496 to 40       457/985
(46 %)
0 diff
(100 %id)
R53119 breast .c 4349 to 4774 431 to 1       431/440
(97 %)
12 diff
(97.3 %id)
AA058733 uterus .c 4352 to 4733 387 to 1       387/387
(100 %)
8 diff
(98.0 %id)
AW151759 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 4352 to 4768 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
N77340 liver and spleen .c 4353 to 4562 1 to 210       210/210
(100 %)
1 diff
(99.6 %id)
AV706466 adrenal gland .c 4354 to 4798 26 to 469       444/473
(93 %)
3 diff
(99.4 %id)
AV704638 adrenal gland .c 4354 to 4803 17 to 466       450/466
(96 %)
6 diff
(98.8 %id)
N35506 melanocyte .c 4356 to 4733 383 to 1       383/383
(100 %)
5 diff
(98.7 %id)
BF058704 fibrotheoma, ovary .c 4356 to 4733 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AI222287 pooled .c 4357 to 4733 377 to 1       377/377
(100 %)
2 diff
(99.5 %id)
Z28359   .c 4359 to 4750 1 to 384       384/421
(91 %)
14 diff
(96.7 %id)
AI281364 adenocarcinoma, colon .c 4359 to 4733 375 to 1       375/375
(100 %)
0 diff
(100 %id)
AW074422 colon, juvenile granulosa tumor .c 4361 to 4799 440 to 2       439/441
(99 %)
0 diff
(100 %id)
AA854438 parathyroid gland, parathyroid tumor .c 4363 to 4733 371 to 1       371/371
(100 %)
1 diff
(99.8 %id)
AI749548 colon .c 4364 to 4718 387 to 33       355/387
(91 %)
0 diff
(100 %id)
AA121940 uterus .c 4366 to 4733 381 to 1   fully sequenced,   381/381
(100 %)
11 diff
(97.2 %id)
AA936270 pooled .c 4367 to 4733 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AI095875 uterus .c 4369 to 4799 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
AI308929 adenocarcinoma, colon .c 4372 to 4733 362 to 1       362/362
(100 %)
0 diff
(100 %id)
N41823 placenta .c 4373 to 4752 1 to 380   fully sequenced,   380/380
(100 %)
0 diff
(100 %id)
N32868 placenta .c 4376 to 4733 361 to 1       361/375
(96 %)
3 diff
(99.2 %id)
AI291750 carcinoid, lung .c 4378 to 4781 404 to 1       404/404
(100 %)
3 diff
(99.3 %id)
AI032789 parathyroid gland, parathyroid tumor .c 4379 to 4729 330 to 4       327/399
(81 %)
0 diff
(100 %id)
AA928837 pooled .c 4382 to 4733 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
AI827160 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4387 to 4776 389 to 1       389/389
(100 %)
4 diff
(99.0 %id)
AA553709 breast .c 4388 to 4733 346 to 1       346/346
(100 %)
1 diff
(99.8 %id)
AI277503 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4389 to 4733 345 to 1       345/345
(100 %)
3 diff
(99.2 %id)
AA079366   .c 4395 to 4790 1 to 396       396/396
(100 %)
0 diff
(100 %id)
AL135516 melanoma (MeWo cell line) .c 4400 to 4790 1 to 391       391/391
(100 %)
1 diff
(99.8 %id)
AI381858 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4403 to 4733 334 to 1       334/334
(100 %)
4 diff
(98.9 %id)
AW996594 breast_normal .c 4406 to 4810 416 to 11     Submitted on the opposite strand 406/416
(97 %)
0 diff
(100 %id)
AA279203 germinal center B cell .c 4406 to 4733 328 to 1       328/328
(100 %)
1 diff
(99.7 %id)
AI183279 placenta .c 4406 to 4733 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
BF058780 fibrotheoma, ovary .c 4419 to 4781 363 to 1       363/363
(100 %)
2 diff
(99.5 %id)
AA463265 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4424 to 4733 311 to 1   fully sequenced,   311/311
(100 %)
2 diff
(99.4 %id)
AI445384 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 4427 to 4799 370 to 2       369/370
(99 %)
0 diff
(100 %id)
AI299676 carcinoid, lung .c 4429 to 4781 354 to 1       354/354
(100 %)
6 diff
(98.4 %id)
BE166727 head_neck .c 4430 to 4909 495 to 18     Submitted on the opposite strand 478/495
(96 %)
0 diff
(100 %id)
AI151399 placenta .c 4430 to 4776 347 to 1       347/347
(100 %)
1 diff
(99.8 %id)
AA757820 pineal gland .c 4433 to 4733 301 to 1       301/301
(100 %)
0 diff
(100 %id)
BF732362 fibrotheoma, ovary .c 4435 to 4781 347 to 1       347/347
(100 %)
3 diff
(99.2 %id)
AA661633 normal prostate, Prostate .c 4440 to 4604 168 to 1       168/168
(100 %)
5 diff
(97.1 %id)
BE166730 head_neck .c 4441 to 4909 472 to 4     Submitted on the opposite strand 469/472
(99 %)
0 diff
(100 %id)
AA814049 germinal center B cell .c 4442 to 4579 138 to 1       138/138
(100 %)
0 diff
(100 %id)
AA902536 Kidney .c 4442 to 4733 292 to 1       292/292
(100 %)
0 diff
(100 %id)
TI_57202985   .c 4456 to 4799 108 to 450       343/1041
(32 %)
3 diff
(99.8 %id)
R67863 placenta .c 4458 to 4749 298 to 1   fully sequenced,   298/298
(100 %)
3 diff
(99.0 %id)
BI819746 pooled brain, lung, testis .c 4459 to 4791 1 to 332       332/332
(100 %)
1 diff
(99.7 %id)
R24045 placenta .c 4460 to 4790 335 to 3       333/335
(99 %)
0 diff
(100 %id)
AI184390 placenta .c 4465 to 4781 310 to 1       310/310
(100 %)
8 diff
(97.5 %id)
AI948621 anaplastic oligodendroglioma, brain .c 4478 to 4786 309 to 1       309/309
(100 %)
1 diff
(99.7 %id)
AI041303   .c 4481 to 4799 319 to 1       319/319
(100 %)
10 diff
(96.9 %id)
BF447044 Prostate .c 4481 to 4733 253 to 1       253/253
(100 %)
0 diff
(100 %id)
BF433438 carcinoid, lung .c 4482 to 4772 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
BF054987 pooled .c 4493 to 4733 241 to 1       241/241
(100 %)
0 diff
(100 %id)
CR744428 liver and spleen .c 4496 to 5075 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
W42673 senescent fibroblast .c 4500 to 4733 235 to 1   fully sequenced,   235/235
(100 %)
0 diff
(100 %id)
AA731240 germinal center B cell .c 4503 to 4733 233 to 1       233/233
(100 %)
15 diff
(93.6 %id)
AW769693 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 4506 to 4799 290 to 2       289/296
(97 %)
0 diff
(100 %id)
N32874 placenta .c 4509 to 4733 228 to 1   fully sequenced,   228/228
(100 %)
1 diff
(99.6 %id)
AA688118 normal prostate, Prostate .c 4519 to 4733 215 to 1       215/215
(100 %)
0 diff
(100 %id)
AI203834 lung .c 4521 to 4781 261 to 1       261/261
(100 %)
0 diff
(100 %id)
AI401644 Prostate .c 4521 to 4776 256 to 1       256/256
(100 %)
0 diff
(100 %id)
BM848300 myeloma .c 4523 to 5054 1 to 532       532/532
(100 %)
0 diff
(100 %id)
AA507221 Prostate .c 4530 to 5039 1 to 508       508/508
(100 %)
7 diff
(98.7 %id)
AI636225 Kidney .c 4532 to 4799 268 to 1       268/268
(100 %)
2 diff
(99.3 %id)
BG338191 leiomyosarcoma cell line, uterus .c 4532 to 5280 1 to 768       768/769
(99 %)
36 diff
(95.4 %id)
AA365052 pineal body .c 4534 to 4740 1 to 207       207/207
(100 %)
0 diff
(100 %id)
BP316327 pericardium .c 4537 to 5117 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BE833557 ovary .c 4554 to 4734 16 to 196       181/204
(88 %)
2 diff
(99.1 %id)
BQ183266 Knee, Osteoarthritic Cartilage .c 4560 to 5364 802 to 1   tiling clone,   802/802
(100 %)
6 diff
(99.3 %id)
AW881107 ovary .c 4564 to 5049 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
BG426024 Kidney .c 4568 to 5210 1 to 638       638/896
(71 %)
15 diff
(98.4 %id)
BF303987 muscle, rhabdomyosarcoma .c 4571 to 5367 1 to 779       779/862
(90 %)
29 diff
(96.7 %id)
BQ934256 large cell carcinoma, lung .c 4574 to 5366 816 to 18     Submitted on the opposite strand 799/915
(87 %)
0 diff
(100 %id)
BE297208 muscle, rhabdomyosarcoma .c 4591 to 4903 1 to 313       313/313
(100 %)
0 diff
(100 %id)
AA335482 epididymis .c 4611 to 4711 1 to 101       101/101
(100 %)
0 diff
(100 %id)
AA335598 epididymis .c 4611 to 4740 1 to 130       130/130
(100 %)
0 diff
(100 %id)
AA235055 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4612 to 4733 122 to 1       122/122
(100 %)
0 diff
(100 %id)
R93253 liver and spleen .c 4618 to 5077 1 to 474   fully sequenced,   474/474
(100 %)
15 diff
(96.9 %id)
CA306522 Alveolar Macrophage, lung .c 4627 to 5364 731 to 1       731/735
(99 %)
7 diff
(99.1 %id)
AV753028 Pituitary .c 4646 to 5325 672 to 2     Submitted on the opposite strand 671/688
(97 %)
0 diff
(100 %id)
AA610498 thyroid .c 4648 to 5066 8 to 425       418/425
(98 %)
6 diff
(98.6 %id)
AI951035 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .c 4654 to 4799 147 to 2       146/147
(99 %)
0 diff
(100 %id)
H63629 liver and spleen .c 4671 to 4993 1 to 319   fully sequenced,   319/319
(100 %)
2 diff
(99.4 %id)
T60642 lung .c 4680 to 4849 4 to 173       170/173
(98 %)
6 diff
(96.6 %id)
BU616441 Bone, Subchondral Bone .c 4684 to 5344 678 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 660/660
(100 %)
1 diff
(99.9 %id)
CB242899 Human Lung Epithelial cells, lung .c 4703 to 5344 660 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 642/642
(100 %)
1 diff
(99.9 %id)
BF929424 nervous_tumor .c 4716 to 5246 1 to 530       530/530
(100 %)
7 diff
(98.7 %id)
CK824079 insulinoma, Pancreas .c 4724 to 5344 636 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 621/621
(100 %)
0 diff
(100 %id)
W22181 eye, retina .c 4774 to 5329 565 to 7       559/645
(86 %)
0 diff
(100 %id)
BM876348 insulinoma, Pancreas .c 4780 to 5344 580 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 565/565
(100 %)
0 diff
(100 %id)
AW976694   .c 4786 to 5354 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
AW970158   .c 4787 to 5343 556 to 1     Submitted on the opposite strand 556/646
(86 %)
4 diff
(99.4 %id)
TI_154090320   .c 4787 to 5281 69 to 564     Submitted on the opposite strand 496/689
(71 %)
21 diff
(97.0 %id)
TI_157595636   .c 4787 to 5363 44 to 618     Submitted on the opposite strand 575/771
(74 %)
6 diff
(99.3 %id)
TI_157595732   .c 4787 to 5318 41 to 571     Submitted on the opposite strand 531/571
(92 %)
11 diff
(98.1 %id)
TI_157611919   .c 4787 to 5367 55 to 636     Submitted on the opposite strand 582/770
(75 %)
48 diff
(93.8 %id)
TI_151746823   .c 4787 to 5347 52 to 611     Submitted on the opposite strand 560/1146
(48 %)
10 diff
(99.2 %id)
BF092734 testis_normal .c 4792 to 5269 477 to 2       476/479
(99 %)
0 diff
(100 %id)
BF377335 testis_normal .c 4792 to 5306 514 to 4       511/516
(99 %)
0 diff
(100 %id)
BI048463 testis_normal .c 4792 to 5119 327 to 1       327/329
(99 %)
26 diff
(92.1 %id)
BI048551 testis_normal .c 4792 to 5281 492 to 5       488/494
(98 %)
0 diff
(100 %id)
AA678995 pineal gland .c 4792 to 5227 1 to 435     Submitted on the opposite strand 435/435
(100 %)
5 diff
(98.9 %id)
AA031367 uterus .c 4792 to 5315 1 to 529     Submitted on the opposite strand 529/534
(99 %)
11 diff
(98.0 %id)
AA046027 uterus .c 4792 to 5229 1 to 442     Submitted on the opposite strand 442/443
(99 %)
5 diff
(98.9 %id)
AA149637 uterus .c 4792 to 5344 1 to 549   AAA Submitted on the opposite strand 549/549
(100 %)
8 diff
(98.6 %id)
AI077719 brain, glioblastoma (pooled) .c 4792 to 5261 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AI097484 heart .c 4792 to 5280 1 to 488     Submitted on the opposite strand 488/488
(100 %)
2 diff
(99.6 %id)
AI144153 heart .c 4792 to 5283 1 to 492     Submitted on the opposite strand 492/492
(100 %)
0 diff
(100 %id)
AI126909 heart .c 4792 to 5223 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
AI131429 heart .c 4792 to 5276 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
AI184485 lung .c 4792 to 5274 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
AI198335 anaplastic oligodendroglioma, brain .c 4792 to 5212 1 to 421     Submitted on the opposite strand 421/421
(100 %)
2 diff
(99.6 %id)
AI299669 carcinoid, lung .c 4792 to 5242 1 to 451     Submitted on the opposite strand 451/451
(100 %)
0 diff
(100 %id)
AI356899 brain, glioblastoma (pooled) .c 4792 to 5292 1 to 502     Submitted on the opposite strand 502/502
(100 %)
9 diff
(98.3 %id)
AI439578 B-cell, chronic lymphotic leukemia .c 4792 to 5081 1 to 282     Submitted on the opposite strand 282/284
(99 %)
12 diff
(95.8 %id)
AI436416 B-cell, chronic lymphotic leukemia .c 4792 to 5276 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
AI696710 Prostate .c 4792 to 5244 1 to 453     Submitted on the opposite strand 453/453
(100 %)
2 diff
(99.6 %id)
AI695566 colon .c 4792 to 5168 1 to 381     Submitted on the opposite strand 381/381
(100 %)
9 diff
(97.7 %id)
AI937199 anaplastic oligodendroglioma, brain .c 4792 to 5214 1 to 423     Submitted on the opposite strand 423/423
(100 %)
2 diff
(99.6 %id)
AW149704 brain, medulloblastoma .c 4792 to 5263 1 to 473     Submitted on the opposite strand 473/473
(100 %)
2 diff
(99.6 %id)
BF732335 fibrotheoma, ovary .c 4792 to 5241 1 to 450     Submitted on the opposite strand 450/450
(100 %)
5 diff
(98.9 %id)
BF116056 fibrotheoma, ovary .c 4792 to 5170 1 to 379     Submitted on the opposite strand 379/379
(100 %)
0 diff
(100 %id)
BF115230 fibrotheoma, ovary .c 4792 to 5298 1 to 507     Submitted on the opposite strand 507/507
(100 %)
0 diff
(100 %id)
CA437319 lung, Metastatic Chondrosarcoma .c 4792 to 5344 571 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 553/553
(100 %)
0 diff
(100 %id)
BF512613   .c 4793 to 5104 1 to 312     Submitted on the opposite strand 312/321
(97 %)
1 diff
(99.7 %id)
BE858311 brain, glioblastoma (pooled) .c 4794 to 5297 1 to 504     Submitted on the opposite strand 504/504
(100 %)
1 diff
(99.9 %id)
N93420 lung .c 4796 to 5315 6 to 531     Submitted on the opposite strand 526/531
(99 %)
6 diff
(98.9 %id)
N95716 lung .c 4797 to 5204 7 to 417     Submitted on the opposite strand 411/433
(94 %)
6 diff
(98.7 %id)
BQ375766 testis_normal .c 4799 to 5225 433 to 6       428/441
(97 %)
0 diff
(100 %id)
T64320 lung .c 4800 to 5341 534 to 4       531/537
(98 %)
0 diff
(100 %id)
AI148806 placenta .c 4801 to 5215 1 to 415     Submitted on the opposite strand 415/415
(100 %)
0 diff
(100 %id)
AI818837 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4802 to 5259 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
AA600846 breast .c 4804 to 5294 1 to 490     Submitted on the opposite strand 490/490
(100 %)
1 diff
(99.8 %id)
AA855062 parathyroid gland, parathyroid tumor .c 4804 to 5345 1 to 542     Submitted on the opposite strand 542/542
(100 %)
1 diff
(99.9 %id)
AA808626 carcinoid, lung .c 4804 to 5280 1 to 477     Submitted on the opposite strand 477/477
(100 %)
10 diff
(98.0 %id)
BE547167 cervical carcinoma cell line, cervix .c 4804 to 5376 66 to 638       573/907
(63 %)
16 diff
(98.3 %id)
W72105 heart .c 4807 to 5033 17 to 242     Submitted on the opposite strand 226/242
(93 %)
8 diff
(96.7 %id)
BE674665 B-cell, chronic lymphotic leukemia .c 4807 to 5256 13 to 463     Submitted on the opposite strand 451/463
(97 %)
8 diff
(98.3 %id)
AI092702 parathyroid gland, parathyroid tumor .c 4810 to 5276 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
AI140121 heart .c 4810 to 5287 1 to 479     Submitted on the opposite strand 479/479
(100 %)
1 diff
(99.8 %id)
AI147695 brain, glioblastoma (pooled) .c 4810 to 5276 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
AI143324 heart .c 4810 to 5215 1 to 406     Submitted on the opposite strand 406/406
(100 %)
0 diff
(100 %id)
AI131430 heart .c 4810 to 5307 1 to 498     Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
AI151189 placenta .c 4810 to 5274 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
AI151243 placenta .c 4810 to 5264 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
AI184792 placenta .c 4810 to 5172 1 to 363     Submitted on the opposite strand 363/369
(98 %)
1 diff
(99.8 %id)
AI186771 lung .c 4810 to 5263 1 to 456     Submitted on the opposite strand 456/457
(99 %)
8 diff
(98.3 %id)
AI298091 carcinoid, lung .c 4810 to 5212 1 to 403     Submitted on the opposite strand 403/403
(100 %)
0 diff
(100 %id)
AI333860 lung .c 4810 to 5214 1 to 405     Submitted on the opposite strand 405/405
(100 %)
2 diff
(99.6 %id)
AW166401 cervix .c 4810 to 5217 1 to 408     Submitted on the opposite strand 408/408
(100 %)
0 diff
(100 %id)
BE676603 B-cell, chronic lymphotic leukemia .c 4810 to 5336 1 to 527     Submitted on the opposite strand 527/527
(100 %)
1 diff
(99.9 %id)
AI146715 heart .c 4811 to 5297 1 to 487     Submitted on the opposite strand 487/487
(100 %)
1 diff
(99.8 %id)
N40453 multiple sclerosis lesions .c 4817 to 5117 1 to 309     Submitted on the opposite strand 309/316
(97 %)
9 diff
(97.2 %id)
AA701056 pineal gland .c 4818 to 5255 1 to 437     Submitted on the opposite strand 437/437
(100 %)
9 diff
(98.0 %id)
AA514494 colon .c 4818 to 5293 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
AI003781 Kidney .c 4818 to 5296 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AI027527 parathyroid gland, parathyroid tumor .c 4818 to 5296 1 to 479     Submitted on the opposite strand 479/479
(100 %)
1 diff
(99.8 %id)
AI146908 senescent fibroblast .c 4818 to 5188 1 to 369     Submitted on the opposite strand 369/369
(100 %)
3 diff
(99.2 %id)
AI092851 heart .c 4818 to 5296 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AI122560 heart .c 4818 to 5100 1 to 283     Submitted on the opposite strand 283/283
(100 %)
0 diff
(100 %id)
AI144289 brain, glioblastoma (pooled) .c 4818 to 5277 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
AI188617 placenta .c 4818 to 5297 1 to 480     Submitted on the opposite strand 480/480
(100 %)
1 diff
(99.8 %id)
AI279234 carcinoid, lung .c 4818 to 5217 1 to 400     Submitted on the opposite strand 400/400
(100 %)
2 diff
(99.5 %id)
AI475747 B-cell, chronic lymphotic leukemia .c 4818 to 5296 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AI660743 thymus, pooled .c 4818 to 5260 1 to 441     Submitted on the opposite strand 441/441
(100 %)
3 diff
(99.4 %id)
AI870311 anaplastic oligodendroglioma, brain .c 4818 to 5287 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AI949569 anaplastic oligodendroglioma, brain .c 4818 to 5278 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
AW009154 colon .c 4818 to 5298 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
N80278 lung .c 4820 to 5273 1 to 459     Submitted on the opposite strand 459/462
(99 %)
6 diff
(98.8 %id)
AI219345 placenta .c 4820 to 5205 1 to 386     Submitted on the opposite strand 386/386
(100 %)
3 diff
(99.3 %id)
DB357721 whole embryo, mainly head .c 4822 to 5344 527 to 1       527/533
(98 %)
5 diff
(99.1 %id)
N48492 multiple sclerosis lesions .c 4822 to 5342 522 to 1     Submitted on the opposite strand 522/524
(99 %)
7 diff
(98.7 %id)
AI129599 uterus .c 4825 to 5134 107 to 417     Submitted on the opposite strand 311/417
(74 %)
6 diff
(98.6 %id)
BI048455 testis_normal .c 4827 to 5313 1 to 491       491/500
(98 %)
28 diff
(94.4 %id)
AI302699 carcinoid, lung .c 4827 to 5284 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
CA943473 Pancreas, Purified pancreatic islet .c 4828 to 5426 1 to 600     Submitted on the opposite strand 600/600
(100 %)
1 diff
(99.9 %id)
AA442404   .c 4831 to 5345 514 to 1     Submitted on the opposite strand 514/514
(100 %)
3 diff
(99.5 %id)
AI857619 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4835 to 5320 1 to 486     Submitted on the opposite strand 486/486
(100 %)
1 diff
(99.8 %id)
AA843183 parathyroid gland, parathyroid tumor .c 4836 to 5149 1 to 314     Submitted on the opposite strand 314/314
(100 %)
1 diff
(99.7 %id)
R72066 breast .c 4840 to 5203 1 to 371     Submitted on the opposite strand 371/371
(100 %)
10 diff
(97.4 %id)
AI810357 Prostate .c 4840 to 5276 1 to 437     Submitted on the opposite strand 437/437
(100 %)
1 diff
(99.8 %id)
AI830919 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4840 to 5296 1 to 451     Submitted on the opposite strand 451/451
(100 %)
3 diff
(99.4 %id)
AI814554 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 4840 to 5288 1 to 448     Submitted on the opposite strand 448/448
(100 %)
5 diff
(98.9 %id)
BE645337 pooled .c 4840 to 5288 1 to 449     Submitted on the opposite strand 449/449
(100 %)
4 diff
(99.2 %id)
AA031366 uterus .c 4845 to 5360 526 to 2     Submitted on the opposite strand 525/530
(99 %)
0 diff
(100 %id)
BF888438 testis_normal .c 4847 to 5313 1 to 469       469/478
(98 %)
13 diff
(97.3 %id)
AA043497 uterus .c 4856 to 5364 1 to 513   fully sequenced,   513/513
(100 %)
13 diff
(97.5 %id)
BU196096 hepatocellular carcinoma, cell line, Liver .c 4856 to 5344 23 to 511   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 489/511
(95 %)
6 diff
(98.9 %id)
BF902365 marrow .c 4860 to 5194 9 to 347       339/350
(96 %)
12 diff
(96.6 %id)
W07407 lung .c 4861 to 5342 495 to 1     Submitted on the opposite strand 495/564
(87 %)
22 diff
(96.1 %id)
AA830728 germinal center B cell .c 4861 to 5049 1 to 189     Submitted on the opposite strand 189/189
(100 %)
0 diff
(100 %id)
BQ774627 Bone, Human Chondrosarcoma Cell Line .c 4861 to 5340 91 to 571     Submitted on the opposite strand 481/580
(82 %)
2 diff
(99.7 %id)
T90637 liver and spleen .c 4875 to 5334 469 to 1       469/471
(99 %)
12 diff
(97.5 %id)
BU736146 eye, fetal eyes .c 4878 to 5344 485 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 467/467
(100 %)
0 diff
(100 %id)
AA724134 parathyroid gland, parathyroid tumor .c 4885 to 5319 1 to 434     Submitted on the opposite strand 434/434
(100 %)
1 diff
(99.8 %id)
H29748 breast .c 4885 to 5186 1 to 309     Submitted on the opposite strand 309/312
(99 %)
7 diff
(97.8 %id)
AA036664 uterus .c 4885 to 5195 1 to 317     Submitted on the opposite strand 317/374
(84 %)
10 diff
(97.4 %id)
AA745876 germinal center B cell .c 4885 to 5192 1 to 308     Submitted on the opposite strand 308/308
(100 %)
0 diff
(100 %id)
AA854526 parathyroid gland, parathyroid tumor .c 4885 to 5189 1 to 305     Submitted on the opposite strand 305/305
(100 %)
1 diff
(99.7 %id)
AA854478 parathyroid gland, parathyroid tumor .c 4885 to 5137 1 to 253     Submitted on the opposite strand 253/253
(100 %)
1 diff
(99.7 %id)
AA860453 parathyroid gland, parathyroid tumor .c 4885 to 5244 1 to 357     Submitted on the opposite strand 357/357
(100 %)
4 diff
(98.9 %id)
AA838818 parathyroid gland, parathyroid tumor .c 4885 to 5310 1 to 425     Submitted on the opposite strand 425/425
(100 %)
2 diff
(99.6 %id)
AA862668 pooled germ cell tumors .c 4885 to 5155 1 to 271     Submitted on the opposite strand 271/271
(100 %)
0 diff
(100 %id)
AA978337 carcinoid, lung .c 4885 to 5077 1 to 193     Submitted on the opposite strand 193/193
(100 %)
2 diff
(99.0 %id)
AA961001 carcinoid, lung .c 4885 to 5238 1 to 354     Submitted on the opposite strand 354/354
(100 %)
0 diff
(100 %id)
AA975233 pooled germ cell tumors .c 4885 to 5311 1 to 426     Submitted on the opposite strand 426/426
(100 %)
1 diff
(99.8 %id)
AA987914 carcinoid, lung .c 4885 to 5158 1 to 274     Submitted on the opposite strand 274/274
(100 %)
0 diff
(100 %id)
AA988294 2 pooled tumors (clear cell type), Kidney .c 4885 to 5094 1 to 210     Submitted on the opposite strand 210/210
(100 %)
0 diff
(100 %id)
AI000298 pooled germ cell tumors .c 4885 to 5191 1 to 307     Submitted on the opposite strand 307/307
(100 %)
0 diff
(100 %id)
AI034120 parathyroid gland, parathyroid tumor .c 4885 to 5216 1 to 332     Submitted on the opposite strand 332/332
(100 %)
0 diff
(100 %id)
AI039499   .c 4885 to 5275 1 to 391     Submitted on the opposite strand 391/391
(100 %)
6 diff
(98.5 %id)
AI128583 heart .c 4885 to 5157 1 to 273     Submitted on the opposite strand 273/273
(100 %)
0 diff
(100 %id)
AA131309 uterus .c 4886 to 5344 1 to 464   fully sequenced,   464/464
(100 %)
19 diff
(96.0 %id)
AA150791 uterus .c 4886 to 5328 1 to 448   fully sequenced,   448/448
(100 %)
10 diff
(97.8 %id)
R92798 liver and spleen .c 4892 to 5343 465 to 5       461/473
(97 %)
0 diff
(100 %id)
AI419022 brain, glioblastoma (pooled) .c 4892 to 5296 1 to 405     Submitted on the opposite strand 405/405
(100 %)
0 diff
(100 %id)
H96272 pineal gland .c 4901 to 5114 1 to 214       214/214
(100 %)
0 diff
(100 %id)
CX761293 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 4901 to 5665 783 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 765/765
(100 %)
3 diff
(99.7 %id)
BF902332 marrow .c 4902 to 5296 12 to 406       395/406
(97 %)
6 diff
(98.6 %id)
AA486067 lung .c 4902 to 5346 445 to 1       445/445
(100 %)
1 diff
(99.8 %id)
R93894 liver and spleen .c 4905 to 5344 449 to 5       445/450
(98 %)
0 diff
(100 %id)
BF888464 testis_normal .c 4907 to 5313 7 to 414       408/423
(96 %)
19 diff
(95.6 %id)
AI473840 follicular lymphoma, lymph node .c 4920 to 5346 427 to 1       427/427
(100 %)
0 diff
(100 %id)
AA079367   .c 4922 to 5344 425 to 2       424/425
(99 %)
0 diff
(100 %id)
AA086173   .c 4929 to 5344 417 to 1       417/417
(100 %)
3 diff
(99.3 %id)
R00240 liver and spleen .c 4943 to 5335 400 to 1       400/402
(99 %)
10 diff
(97.6 %id)
N55334 liver and spleen .c 4948 to 5344 398 to 1       398/398
(100 %)
4 diff
(99.0 %id)
N44173 multiple sclerosis lesions .c 4958 to 5280 1 to 322   fully sequenced,   322/322
(100 %)
3 diff
(99.1 %id)
H63630 liver and spleen .c 4963 to 5334 373 to 1   fully sequenced,   373/373
(100 %)
4 diff
(99.0 %id)
R72109 breast .c 4975 to 5344 371 to 1     Submitted on the opposite strand 371/371
(100 %)
4 diff
(99.0 %id)
AA088583 uterus .c 4983 to 5345 366 to 1     Submitted on the opposite strand 366/366
(100 %)
7 diff
(98.1 %id)
N23435 nose, olfactory epithelium .c 4990 to 5344 355 to 1       355/355
(100 %)
7 diff
(98.1 %id)
AA043233 uterus .c 5002 to 5344 343 to 1   fully sequenced,   343/343
(100 %)
2 diff
(99.5 %id)
W24959 lung .c 5007 to 5345 343 to 1     Submitted on the opposite strand 343/347
(98 %)
6 diff
(98.3 %id)
AA131522 uterus .c 5027 to 5344 318 to 1   fully sequenced,   318/318
(100 %)
3 diff
(99.1 %id)
R93159 liver and spleen .c 5047 to 5345 308 to 1   fully sequenced,   308/308
(100 %)
9 diff
(97.1 %id)
AW892169 nervous_normal .c 5050 to 5563 513 to 1       513/513
(100 %)
5 diff
(99.1 %id)
AA046079 uterus .c 5052 to 5340 297 to 1     Submitted on the opposite strand 297/297
(100 %)
15 diff
(95.0 %id)
BM707656 eye, RPE and Choroid .c 5053 to 5348 296 to 1     Submitted on the opposite strand 296/296
(100 %)
0 diff
(100 %id)
BF902724 marrow .c 5054 to 5311 1 to 264       264/266
(99 %)
18 diff
(93.3 %id)
BQ334201 marrow .c 5065 to 5535 479 to 10       470/479
(98 %)
0 diff
(100 %id)
FN164731 breast carcinoma .c 5083 to 5202 1 to 113       113/113
(100 %)
6 diff
(94.7 %id)
BQ322348 colon_est .c 5121 to 5541 1 to 421       421/421
(100 %)
17 diff
(96.0 %id)
W77770 heart .c 5123 to 5563 454 to 1     Submitted on the opposite strand 454/486
(93 %)
15 diff
(97.0 %id)
AA150668 uterus .c 5127 to 5344 218 to 1   fully sequenced,   218/218
(100 %)
2 diff
(99.1 %id)
BU602130 mixed (pool of 40 RNAs) .c 5132 to 5667 1 to 536       536/540
(99 %)
2 diff
(99.7 %id)
BU958113 mixed (pool of 40 RNAs) .c 5132 to 5556 1 to 425   AAA   425/431
(98 %)
3 diff
(99.4 %id)
CF145252 CNCAP(3)T-225 cell line, Prostate .c 5165 to 5620 1 to 455       455/455
(100 %)
7 diff
(98.5 %id)
CF145256 CNCAP(3)T-225 cell line, Prostate .c 5165 to 5605 1 to 440       440/440
(100 %)
6 diff
(98.7 %id)
TI_154177449   .c 5170 to 5672 78 to 579       502/616
(81 %)
5 diff
(99.2 %id)
TI_154177450   .c 5170 to 5672 78 to 579       502/506
(99 %)
10 diff
(98.1 %id)
AI459658 colon .c 5172 to 5562 391 to 1       391/391
(100 %)
0 diff
(100 %id)
BM729195 eye, fetal eye .c 5175 to 5666 10 to 500   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 491/500
(98 %)
6 diff
(98.8 %id)
W21461 lung .c 5178 to 5345 168 to 1     Submitted on the opposite strand 168/170
(98 %)
0 diff
(100 %id)
AI459676 colon .c 5178 to 5562 385 to 1       385/385
(100 %)
5 diff
(98.8 %id)
T54404 placenta .c 5179 to 5345 1 to 167       167/167
(100 %)
5 diff
(97.1 %id)
AA668808 lung, lung carcinoma .c 5187 to 5344 158 to 1       158/158
(100 %)
0 diff
(100 %id)
BF108742 pooled .c 5196 to 5669 476 to 3   tiling clone,   474/476
(99 %)
0 diff
(100 %id)
BF108751 pooled .c 5197 to 5669 475 to 3       473/475
(99 %)
0 diff
(100 %id)
CA389448 eye, RPE/choroid .c 5215 to 5669 454 to 1     Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
AI908307 breast .c 5218 to 5568 399 to 50       350/718
(48 %)
0 diff
(100 %id)
AW369792 breast .c 5218 to 5549 351 to 21       331/357
(92 %)
0 diff
(100 %id)
AW369836 breast .c 5218 to 5539 363 to 41       323/369
(87 %)
0 diff
(100 %id)
AW369853 breast .c 5218 to 5519 302 to 1       302/328
(92 %)
17 diff
(94.9 %id)
AI122662 heart .c 5222 to 5669 449 to 2       448/449
(99 %)
0 diff
(100 %id)
AA149505 uterus .c 5234 to 5345 113 to 1     Submitted on the opposite strand 113/114
(99 %)
1 diff
(99.2 %id)
BE183001 head_neck .c 5237 to 5337 113 to 12     Submitted on the opposite strand 102/113
(90 %)
0 diff
(100 %id)
AA932400 carcinoid, lung .c 5241 to 5648 1 to 407     Submitted on the opposite strand 407/407
(100 %)
2 diff
(99.6 %id)
BQ008375 Chondrosarcoma, Left Pelvis .c 5243 to 5666 442 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 424/424
(100 %)
2 diff
(99.6 %id)
AA948186 carcinoid, lung .c 5246 to 5641 1 to 395     Submitted on the opposite strand 395/395
(100 %)
3 diff
(99.3 %id)
N34281 multiple sclerosis lesions .c 5250 to 5670 424 to 1   fully sequenced,   424/424
(100 %)
3 diff
(99.3 %id)
AI335780 uterus .c 5310 to 5669 362 to 3       360/362
(99 %)
0 diff
(100 %id)
CA450538 Human Lung Epithelial cells, lung .c 5311 to 5666 1 to 355   AAA Submitted on the opposite strand 355/355
(100 %)
1 diff
(99.8 %id)
BM716891 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 5314 to 5670 6 to 361   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 356/361
(98 %)
6 diff
(98.4 %id)
TI_151776677   .c 5314 to 5672 83 to 440   tiling clone,   358/1086
(32 %)
5 diff
(99.6 %id)
T54329 placenta .c 5319 to 5667 357 to 1       357/358
(99 %)
14 diff
(96.1 %id)
AI302206 2 pooled tumors (clear cell type), Kidney .c 5333 to 5642 1 to 309     Submitted on the opposite strand 309/309
(100 %)
1 diff
(99.7 %id)
AI436061 pooled .c 5334 to 5666 347 to 15   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 333/333
(100 %)
1 diff
(99.7 %id)
BM682118 eye, fetal eye .c 5371 to 5666 313 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 295/295
(100 %)
1 diff
(99.7 %id)
CN280732 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 5380 to 5664 285 to 1     Submitted on the opposite strand 285/285
(100 %)
7 diff
(97.6 %id)
AW021258 cochlea, ear .c 5392 to 5666 8 to 282   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 275/282
(97 %)
6 diff
(97.9 %id)
BU738477 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 5438 to 5670 250 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 232/232
(100 %)
1 diff
(99.6 %id)
EC555402 Prostate .c 5456 to 5558 1 to 97       97/97
(100 %)
5 diff
(94.9 %id)
EC584841 Prostate .c 5457 to 5558 1 to 100       100/100
(100 %)
2 diff
(98.0 %id)
EC454540 Prostate .c 5577 to 5670 94 to 1       94/94
(100 %)
6 diff
(93.7 %id)
BI492286 cochlea, ear .c 5591 to 5678 101 to 14   fully sequenced, Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 88/101
(87 %)
6 diff
(94.1 %id)
AK289409   .d 1 to 1972 2 to 1973 T265A tiling clone,   1973/1973
(100 %)
2 diff
(99.9 %id)
NM_001139467.1   .d 1 to 5450 2 to 5451 exact RefSeq,   5451/5451
(100 %)
0 diff
(100 %id)
DA029725   .d 1 to 569 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DA672388   .d 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AA224481 brain, neuroepithelial cells .d 36 to 540 1 to 505       505/505
(100 %)
8 diff
(98.5 %id)
AA224420 brain, neuroepithelial cells .d 2799 to 2911 113 to 1   tiling clone,   113/113
(100 %)
0 diff
(100 %id)
DA491416 brain .e -35704 to -35155 2 to 551   capped   550/561
(98 %)
1 diff
(99.9 %id)
NM_001139468.1   .e 1 to 5585 2 to 5586 exact RefSeq,   5586/5586
(100 %)
0 diff
(100 %id)
BC032708 Lymph, lymphoma .e 34 to 4707 11 to 4683 exact tiling clone, available from MGC,   4673/4673
(100 %)
8 diff
(99.9 %id)
BM456380 lymph, lymphoma, cell line .e 35 to 696 1 to 662       662/887
(74 %)
10 diff
(98.9 %id)
DT217064 brain .e 250 to 848 1 to 598       598/598
(100 %)
6 diff
(99.0 %id)
BF900706 marrow .e 371 to 653 37 to 320       284/323
(87 %)
9 diff
(97.3 %id)
BF900710 marrow .e 371 to 713 365 to 25     Submitted on the opposite strand 340/381
(89 %)
1 diff
(99.8 %id)
BQ436312 large cell carcinoma, lung .e 561 to 1187 161 to 793       633/934
(67 %)
15 diff
(98.4 %id)
DA634796 Kidney .e 566 to 908 224 to 566   capped   343/565
(60 %)
6 diff
(99.0 %id)
C18242 placenta .e 569 to 1089 1 to 519       519/519
(100 %)
5 diff
(99.1 %id)
DB064163 testis .e 689 to 1233 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
D78921 placenta .e 718 to 1112 1 to 392       392/392
(100 %)
13 diff
(96.7 %id)
CN293659 embryonic stem cells, DMSO-treated H9 cellline .e 765 to 1512 1 to 748       748/750
(99 %)
1 diff
(99.9 %id)
DA733142   .e 789 to 1400 2 to 616   capped   615/623
(98 %)
6 diff
(99.1 %id)
CD251836 testis .e 801 to 1593 15 to 810       796/872
(91 %)
13 diff
(98.6 %id)
CX784567 human embryonic stem cells .e 814 to 1651 1 to 838       838/838
(100 %)
1 diff
(99.9 %id)
AA249862   .e 901 to 1018 1 to 123       123/125
(98 %)
13 diff
(89.6 %id)
BU189637 eye, retinoblastoma .e 972 to 1644 1 to 676       676/881
(76 %)
16 diff
(98.2 %id)
DW430960 Liver .e 1062 to 1331 1 to 271       271/271
(100 %)
15 diff
(94.5 %id)
DB289466 uterus .e 1065 to 1616 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
T78159 liver and spleen .e 1093 to 1468 1 to 379       379/427
(88 %)
4 diff
(99.1 %id)
BX474695   .e 1158 to 1795 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
AA374429 lung .e 1221 to 1585 1 to 368       368/368
(100 %)
8 diff
(97.9 %id)
AW963712   .e 1222 to 1736 1 to 523       523/591
(88 %)
15 diff
(97.5 %id)
CF135527 lymph .e 1272 to 1404 8 to 140       133/140
(95 %)
6 diff
(95.8 %id)
CF136700 lymph .e 1324 to 1763 18 to 457       440/457
(96 %)
6 diff
(98.7 %id)
TI_154165867   .e 1324 to 1783 90 to 549       460/470
(97 %)
6 diff
(98.8 %id)
TI_151754614   .e 1325 to 2107 894 to 116   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 779/886
(87 %)
19 diff
(97.9 %id)
CF137695 lymph .e 1331 to 1890 8 to 567       560/567
(98 %)
6 diff
(99.0 %id)
TI_154167272   .e 1331 to 2000 80 to 752       673/739
(91 %)
7 diff
(99.1 %id)
BM706326 eye, lens .e 1349 to 1771 1 to 423       423/423
(100 %)
0 diff
(100 %id)
AW968555   .e 1362 to 2106 745 to 1     Submitted on the opposite strand 745/746
(99 %)
4 diff
(99.5 %id)
BG425182 Kidney, renal cell adenocarcinoma .e 1377 to 2066 24 to 707       684/851
(80 %)
23 diff
(97.3 %id)
CB159591 Liver .e 1411 to 1569 73 to 231       159/242
(65 %)
6 diff
(97.6 %id)
DB060883 testis .e 1420 to 1976 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA261786 germinal center B cell .e 1430 to 1827 1 to 397   fully sequenced,   397/397
(100 %)
2 diff
(99.5 %id)
AW504352 lymph .e 1444 to 1849 1 to 406       406/406
(100 %)
6 diff
(98.6 %id)
AW504357 lymph .e 1444 to 1916 1 to 473       473/473
(100 %)
6 diff
(98.8 %id)
DW447125 Liver .e 1445 to 1639 19 to 214       196/214
(91 %)
8 diff
(96.3 %id)
TI_154160493   .e 1451 to 1932 80 to 561       482/699
(68 %)
18 diff
(97.5 %id)
TI_154160494   .e 1451 to 2066 97 to 709       613/701
(87 %)
11 diff
(98.5 %id)
BU430190 lymph .e 1488 to 1947 1 to 460       460/460
(100 %)
7 diff
(98.5 %id)
BQ441138 leiomyosarcoma, uterus .e 1504 to 2107 1 to 604   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 604/604
(100 %)
0 diff
(100 %id)
DW467719 Liver .e 1535 to 1863 16 to 344       329/344
(95 %)
9 diff
(97.4 %id)
BE348623 carcinoid, lung .e 1562 to 2106 545 to 1       545/545
(100 %)
0 diff
(100 %id)
BE550146 carcinoid, lung .e 1562 to 2106 545 to 1       545/545
(100 %)
0 diff
(100 %id)
AI553813 anaplastic oligodendroglioma, brain .e 1576 to 2107 532 to 1       532/532
(100 %)
0 diff
(100 %id)
AI652642 pooled germ cell tumors .e 1582 to 2107 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
BE465313 carcinoid, lung .e 1594 to 2106 513 to 1       513/514
(99 %)
0 diff
(100 %id)
DB315425 brain .e 1598 to 2107 510 to 1       510/518
(98 %)
2 diff
(99.7 %id)
AW005325 anaplastic oligodendroglioma, brain .e 1607 to 2107 501 to 1       501/501
(100 %)
0 diff
(100 %id)
BU429822 lymph .e 1609 to 1916 1 to 308       308/308
(100 %)
6 diff
(98.1 %id)
AI401595 anaplastic oligodendroglioma, brain .e 1612 to 1749 142 to 5       138/142
(97 %)
2 diff
(98.6 %id)
AI653494 ovary, tumor, 5 pooled (see description) .e 1615 to 2107 493 to 1       493/493
(100 %)
0 diff
(100 %id)
TI_154150990   .e 1616 to 2066 80 to 528       449/523
(85 %)
11 diff
(97.9 %id)
DW408651 Liver .e 1632 to 1957 17 to 342       326/342
(95 %)
6 diff
(98.3 %id)
AI695065 carcinoid, lung .e 1664 to 2106 442 to 1       442/443
(99 %)
2 diff
(99.6 %id)
BF432768 carcinoid, lung .e 1667 to 2110 445 to 1       445/461
(96 %)
25 diff
(94.6 %id)
AW025734 pooled germ cell tumors .e 1676 to 2107 433 to 1       433/433
(100 %)
1 diff
(99.8 %id)
DA475632   .e 1717 to 2229 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
BX504166   .e 1732 to 2332 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
CN293662 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1755 to 2472 1 to 719       719/719
(100 %)
2 diff
(99.8 %id)
AA243431 germinal center B cell .e 1769 to 2107 338 to 1   fully sequenced,   338/338
(100 %)
1 diff
(99.8 %id)
AI202087 anaplastic oligodendroglioma, brain .e 1790 to 1983 194 to 1       194/195
(99 %)
0 diff
(100 %id)
FN078931 breast carcinoma .e 1801 to 1861 62 to 1     Submitted on the opposite strand 62/63
(98 %)
1 diff
(98.5 %id)
AW500219 lymph .e 1811 to 2315 1 to 505       505/505
(100 %)
5 diff
(99.1 %id)
CF138300 lymph .e 1811 to 2258 1 to 448       448/448
(100 %)
6 diff
(98.7 %id)
BF828267 head_normal .e 1814 to 2310 1 to 489       489/489
(100 %)
24 diff
(95.1 %id)
BF438094 carcinoid, lung .e 1814 to 2110 297 to 1       297/297
(100 %)
0 diff
(100 %id)
TI_154154361   .e 1818 to 2458 80 to 717       638/641
(99 %)
14 diff
(97.9 %id)
TI_154168169   .e 1818 to 2319 80 to 582       503/505
(99 %)
6 diff
(98.9 %id)
DR980627 placenta .e 1833 to 2107 1 to 274   AAA Submitted on the opposite strand 274/274
(100 %)
6 diff
(97.9 %id)
AL039261 breast cancer .e 1834 to 2483 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
T77998 liver and spleen .e 1835 to 2101 276 to 10       267/280
(95 %)
5 diff
(98.3 %id)
CN293660 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1840 to 2511 1 to 673       673/673
(100 %)
1 diff
(99.9 %id)
CF135550 lymph .e 1852 to 2470 8 to 626       619/626
(98 %)
8 diff
(98.8 %id)
TI_154163964   .e 1852 to 2624 79 to 842       764/901
(84 %)
17 diff
(98.2 %id)
CF137832 lymph .e 1901 to 2281 8 to 388       381/388
(98 %)
6 diff
(98.5 %id)
TI_154167495   .e 1901 to 2370 81 to 550       470/470
(100 %)
4 diff
(99.2 %id)
BU429021 lymph .e 1922 to 2360 7 to 445       439/445
(98 %)
1 diff
(99.8 %id)
TI_154148911   .e 1922 to 2643 67 to 780       714/716
(99 %)
28 diff
(96.1 %id)
TI_154150062   .e 1922 to 2608 79 to 762       684/785
(87 %)
39 diff
(95.1 %id)
CF138080 lymph .e 1945 to 2413 1 to 469       469/469
(100 %)
7 diff
(98.6 %id)
TI_154167818   .e 1952 to 2463 80 to 591       512/512
(100 %)
2 diff
(99.7 %id)
AW500312 lymph .e 1975 to 2380 1 to 406       406/406
(100 %)
5 diff
(98.8 %id)
TI_154154464   .e 1982 to 2568 80 to 672       593/695
(85 %)
18 diff
(97.5 %id)
CN293661 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1988 to 2637 1 to 650       650/650
(100 %)
0 diff
(100 %id)
AI493100 Kidney .e 2000 to 2433 434 to 1       434/434
(100 %)
0 diff
(100 %id)
DW458379 Liver .e 2008 to 2093 17 to 102   AAA   86/104
(82 %)
7 diff
(93.3 %id)
DW458380 Liver .e 2008 to 2093 17 to 102   AAA   86/104
(82 %)
7 diff
(93.3 %id)
DW458381 Liver .e 2008 to 2093 17 to 102   AAA   86/104
(82 %)
7 diff
(93.3 %id)
DW458382 Liver .e 2008 to 2093 17 to 102   AAA   86/104
(82 %)
7 diff
(93.3 %id)
AW191632 Pancreas, pancreatic islets .e 2076 to 2440 1 to 365       365/366
(99 %)
4 diff
(99.0 %id)
CF137428 lymph .e 2082 to 2546 8 to 472       465/472
(98 %)
6 diff
(98.8 %id)
TI_154166849   .e 2082 to 2624 81 to 623       543/543
(100 %)
0 diff
(100 %id)
DA026831   .e 2095 to 2663 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB146065 thymus .e 2104 to 2638 2 to 537   capped   536/536
(100 %)
4 diff
(99.3 %id)
AW505451 lymph .e 2214 to 2589 1 to 376       376/376
(100 %)
4 diff
(99.0 %id)
TI_154162011   .e 2221 to 2788 80 to 647       568/713
(79 %)
24 diff
(96.7 %id)
DA390975 thalamus .e 2267 to 2841 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
FN113497 breast carcinoma .e 2284 to 2342 1 to 59       59/60
(98 %)
2 diff
(96.7 %id)
BG829395 muscle, rhabdomyosarcoma .e 2289 to 2790 54 to 581       528/1134
(46 %)
45 diff
(96.1 %id)
DA294894 hippocampus .e 2290 to 2852 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
BG338432 leiomyosarcoma cell line, uterus .e 2315 to 3043 1 to 725       725/982
(73 %)
52 diff
(94.8 %id)
BG339084 leiomyosarcoma cell line, uterus .e 2315 to 3030 1 to 722       722/722
(100 %)
53 diff
(92.7 %id)
BM454954 leiomyosarcoma, uterus .e 2315 to 3000 31 to 710       680/1185
(57 %)
16 diff
(98.7 %id)
BU619537 Cell Line, Chondrosarcoma .e 2346 to 3095 765 to 19   AAA   747/747
(100 %)
9 diff
(98.8 %id)
AA076639 Pancreas .e 2414 to 2689 1 to 281     Submitted on the opposite strand 281/281
(100 %)
7 diff
(97.6 %id)
BU429492 lymph .e 2508 to 2960 8 to 460       453/460
(98 %)
6 diff
(98.7 %id)
TI_154150565   .e 2508 to 3034 79 to 605       527/527
(100 %)
2 diff
(99.7 %id)
CN293663 embryonic stem cells, DMSO-treated H9 cellline .e 2531 to 2968 1 to 438       438/438
(100 %)
1 diff
(99.8 %id)
AW500584 lymph .e 2577 to 3066 18 to 507       490/507
(96 %)
6 diff
(98.9 %id)
TI_154154834   .e 2577 to 3235 91 to 745       655/665
(98 %)
6 diff
(99.1 %id)
DA864217 placenta .e 2615 to 3199 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
BQ011565 placenta .e 2619 to 3095 495 to 19   AAA   477/477
(100 %)
0 diff
(100 %id)
DA676951   .e 2632 to 3216 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
AI082187 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2649 to 3095 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AI096891 brain, glioblastoma (pooled) .e 2655 to 3098 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
DA527467 brain .e 2664 to 3254 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA882795   .e 2671 to 3230 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BJ990915 hepatoblastoma .e 2676 to 3258 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB364937   .e 2681 to 3095 414 to 1       414/414
(100 %)
5 diff
(98.8 %id)
AI090278 uterus .e 2684 to 3095 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AI917944 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 2701 to 3095 396 to 1       396/413
(95 %)
3 diff
(99.3 %id)
AI189949 placenta .e 2703 to 3094 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AI566530 anaplastic oligodendroglioma, brain .e 2703 to 3101 399 to 1       399/399
(100 %)
3 diff
(99.3 %id)
BU526799 epidermoid carcinoma, cell line, lung .e 2705 to 3610 1 to 908       908/908
(100 %)
17 diff
(98.2 %id)
DA145881 amygdala .e 2731 to 3302 2 to 576   capped   575/575
(100 %)
7 diff
(98.8 %id)
BE799852 lung, small cell carcinoma .e 2772 to 3385 13 to 627       615/629
(97 %)
8 diff
(98.8 %id)
AI040515 liver and spleen .e 2780 to 3095 316 to 1       316/316
(100 %)
4 diff
(98.8 %id)
BF512884   .e 2780 to 3095 332 to 18   AAA   315/315
(100 %)
2 diff
(99.4 %id)
BI254349 cervical carcinoma cell line, cervix .e 2801 to 3600 1 to 815       815/815
(100 %)
28 diff
(96.6 %id)
BQ010963 placenta .e 2850 to 3095 264 to 19   AAA   246/248
(99 %)
0 diff
(100 %id)
TI_57233467   .e 2919 to 3436 27 to 543       517/546
(94 %)
8 diff
(98.6 %id)
BI907114 leukocyte .e 2925 to 3436 1 to 511       511/514
(99 %)
5 diff
(99.1 %id)
BM564416 blood, natural killer cells, cell line .e 2934 to 3838 1 to 919       919/1095
(83 %)
39 diff
(96.5 %id)
BM918141 blood, natural killer cells, cell line .e 2937 to 3761 1 to 829       829/1093
(75 %)
28 diff
(97.5 %id)
BM876611 insulinoma, Pancreas .e 2946 to 3432 1 to 487       487/487
(100 %)
5 diff
(99.0 %id)
BM543989 ovary (pool of 3) .e 2951 to 3919 1 to 980       980/1127
(86 %)
46 diff
(96.0 %id)
W38781 parathyroid gland, parathyroid tumor .e 2968 to 3281 1 to 322       322/324
(99 %)
17 diff
(94.8 %id)
DA024431   .e 2978 to 3541 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA172690 amygdala .e 3005 to 3569 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
CX755793 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 3038 to 3752 1 to 714     Submitted on the opposite strand 714/714
(100 %)
1 diff
(99.9 %id)
DA476155   .e 3041 to 3613 2 to 574   capped   573/574
(99 %)
1 diff
(99.9 %id)
DA265246 caudate nucleus .e 3044 to 3606 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
CR741637 germinal center B cell .e 3055 to 3792 1 to 738       738/738
(100 %)
0 diff
(100 %id)
AA282022 germinal center B cell .e 3055 to 3488 1 to 431       431/431
(100 %)
3 diff
(99.4 %id)
DA650386   .e 3068 to 3632 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP289678 lung .e 3089 to 3671 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BQ641694 eye, normal pigmented retinal epithelium .e 3090 to 3965 22 to 905       884/937
(94 %)
13 diff
(98.7 %id)
BP253742 Kidney .e 3109 to 3687 1 to 579       579/583
(99 %)
5 diff
(99.2 %id)
DA299506 hippocampus .e 3111 to 3695 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA480147   .e 3112 to 3663 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BP254334 Kidney .e 3127 to 3710 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DA718246   .e 3129 to 3709 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BG290574 bladder, transitional cell papilloma, cell line .e 3137 to 3796 1 to 662       662/663
(99 %)
27 diff
(96.0 %id)
DA583870 lung .e 3141 to 3723 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BG825511 muscle, rhabdomyosarcoma .e 3149 to 3940 1 to 797       797/802
(99 %)
15 diff
(98.2 %id)
BC020374 Cervix, carcinoma .e 3152 to 4715 1 to 1564   tiling clone, available from MGC,   1564/1564
(100 %)
2 diff
(99.9 %id)
BQ433019 large cell carcinoma, lung .e 3155 to 3986 1 to 840       840/880
(95 %)
11 diff
(98.8 %id)
CX786894 human embryonic stem cells .e 3155 to 3940 1 to 786       786/786
(100 %)
1 diff
(99.9 %id)
CB127830 cervix, Uterine .e 3173 to 3841 1 to 670       670/670
(100 %)
1 diff
(99.9 %id)
BP379318 uterus .e 3175 to 3752 1 to 579       579/579
(100 %)
3 diff
(99.5 %id)
BP240987 Liver .e 3289 to 3859 1 to 571       571/571
(100 %)
5 diff
(99.2 %id)
CN293667 embryonic stem cells, cell lines H1, H7, andH9 .e 3319 to 3672 1 to 354       354/354
(100 %)
1 diff
(99.8 %id)
DA831816 placenta .e 3324 to 4031 2 to 708   capped   707/707
(100 %)
3 diff
(99.6 %id)
BG112918 Bone, osteosarcoma, cell line .e 3352 to 4098 1 to 736       736/944
(77 %)
15 diff
(98.5 %id)
CX760317 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 3365 to 4134 1 to 757     Submitted on the opposite strand 757/835
(90 %)
20 diff
(97.7 %id)
BF935069 nervous_tumor .e 3367 to 3555 1 to 187       187/187
(100 %)
24 diff
(87.2 %id)
BP376848 uterus .e 3371 to 3920 1 to 550       550/550
(100 %)
0 diff
(100 %id)
CF264862 Brain glioblastoma .e 3380 to 4260 1 to 883       883/883
(100 %)
17 diff
(98.1 %id)
BF310817 brain, neuroblastoma .e 3441 to 4226 1 to 782       782/952
(82 %)
45 diff
(95.3 %id)
BG251559 adenocarcinoma, cell line, Liver .e 3444 to 4195 1 to 752       752/753
(99 %)
49 diff
(93.5 %id)
BI260211 cervical carcinoma cell line, cervix .e 3445 to 4329 1 to 882       882/972
(90 %)
24 diff
(97.6 %id)
BP379557 uterus .e 3480 to 4061 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
BM694402 eye, RPE and Choroid .e 3537 to 3907 1 to 371       371/371
(100 %)
0 diff
(100 %id)
BQ049853 lymph, lymphoma, cell line .e 3553 to 4475 1 to 926       926/1048
(88 %)
15 diff
(98.6 %id)
BQ778642 Pancreas, Purified pancreatic islet .e 3575 to 3801 1 to 227       227/227
(100 %)
2 diff
(99.2 %id)
BP292878 lung .e 3575 to 4154 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
CN293664 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 3594 to 4042 1 to 449       449/449
(100 %)
1 diff
(99.8 %id)
BP375758 uterus .e 3633 to 4196 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BP330709 rectum .e 3639 to 4220 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA603921   .e 3645 to 4149 2 to 506   capped   505/505
(100 %)
2 diff
(99.7 %id)
BP375628 uterus .e 3652 to 4216 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
BF205581 muscle, rhabdomyosarcoma .e 3713 to 4431 1 to 721       721/836
(86 %)
37 diff
(95.6 %id)
BG254148 adenocarcinoma, cell line, Prostate .e 3736 to 4504 1 to 754       754/855
(88 %)
29 diff
(96.7 %id)
BP252685 Kidney .e 3740 to 4322 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
EH345534   .e 3742 to 3837 1 to 94       94/94
(100 %)
2 diff
(97.9 %id)
DB250288 uterus .e 3745 to 4207 2 to 464   capped   463/466
(99 %)
1 diff
(99.8 %id)
BQ778425 Pancreas, Purified pancreatic islet .e 4082 to 4674 593 to 1   tiling clone,   593/593
(100 %)
0 diff
(100 %id)
N93195 parathyroid gland, parathyroid tumor .e 4153 to 4644 488 to 6       483/512
(94 %)
0 diff
(100 %id)
AW576157 lymph .e 4259 to 4714 456 to 1       456/456
(100 %)
3 diff
(99.4 %id)
AA280646 germinal center B cell .e 4365 to 4649 285 to 1       285/285
(100 %)
1 diff
(99.7 %id)
BJ990916 hepatoblastoma .e 4704 to 5243 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
DB377666 placenta .e 4782 to 5260 477 to 1   tiling clone,   477/480
(99 %)
14 diff
(97.1 %id)
AA459445 germinal center B cell .f 1 to 447 1 to 447   tiling clone,   447/447
(100 %)
5 diff
(98.9 %id)
AA465669 germinal center B cell .f 1439 to 1658 220 to 1   tiling clone,   220/220
(100 %)
2 diff
(99.1 %id)
AW968730   .g 1 to 402 1 to 402   tiling clone,   402/413
(97 %)
17 diff
(95.9 %id)
BF349735 head_neck .g 378 to 888 56 to 564   tiling clone,   509/571
(89 %)
6 diff
(99.0 %id)
BP373537 umbilical cord .h 1 to 553 29 to 581 exact tiling clone,   553/581
(95 %)
6 diff
(99.0 %id)
DB077642 testis .i 1 to 567 2 to 568 A113V tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA305993 hippocampus .i 62 to 547 107 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
BX280951 embryonal carcinoma, cell line, testis .j 1 to 496 1 to 496 exact tiling clone,   496/496
(100 %)
0 diff
(100 %id)
AK126050 testis .k-u 1 to 5131 2 to 5133 exact tiling clone, available from FLJ,   5133/5133
(100 %)
14 diff
(99.8 %id)
DB087636 testis .k-u 1 to 568 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BQ711071 Spleen .k-u 3001 to 3840 1 to 846 exact     846/887
(95 %)
10 diff
(98.9 %id)
BU146701 Spleen .k-u 3001 to 3855 1 to 857 exact     857/857
(100 %)
2 diff
(99.8 %id)
CV349496 marrow .k-u 3490 to 3942 1 to 454   tiling clone,   454/461
(98 %)
10 diff
(97.9 %id)
DW450147 Liver .k-u 3532 to 3713 17 to 200       184/200
(92 %)
11 diff
(94.5 %id)
BF873661 lung_tumor .k-u 3595 to 3749 330 to 481       391/482
(81 %)
14 diff
(97.1 %id)
BE142252 head_neck .k-u 4337 to 4586 252 to 3   tiling clone, Submitted on the opposite strand 250/252
(99 %)
0 diff
(100 %id)
DW463220 Liver .k-u 4609 to 4962 10 to 363       354/363
(97 %)
6 diff
(98.4 %id)
DW467311 Liver .k-u 4609 to 4946 10 to 347   tiling clone,   338/347
(97 %)
6 diff
(98.3 %id)
DB341216 testis .k-u 4610 to 5131 522 to 1       522/522
(100 %)
3 diff
(99.5 %id)
FN085950 breast carcinoma .k-u 4877 to 4973 1 to 94       94/94
(100 %)
6 diff
(93.7 %id)
BP378326 uterus .l 1 to 580 1 to 581 exact tiling clone,   581/581
(100 %)
2 diff
(99.7 %id)
AI683357 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .l 135 to 709 572 to 1   tiling clone,   572/572
(100 %)
6 diff
(99.0 %id)
BM040763 Kidney, Wilms' tumor, cell line .l 258 to 700 1 to 444   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 444/444
(100 %)
4 diff
(99.1 %id)
BE084388 breast .l 286 to 452 13 to 176       164/181
(90 %)
5 diff
(97.3 %id)
BG429092 Kidney .m 1 to 620 1 to 622 exact tiling clone, available from MGC,   622/622
(100 %)
7 diff
(98.9 %id)
BC029394 Kidney .m 2 to 923 1 to 922 exact tiling clone, available from MGC, AAA   922/922
(100 %)
0 diff
(100 %id)
DW427134 Liver .n-u 1 to 264 17 to 280 V4A tiling clone,   264/280
(94 %)
6 diff
(97.9 %id)
DW408653 Liver .n-u 167 to 492 17 to 342   tiling clone,   326/342
(95 %)
6 diff
(98.3 %id)
DW429438 Liver .o-u 1 to 386 17 to 402 exact tiling clone,   386/402
(96 %)
6 diff
(98.6 %id)
BE930755 placenta_normal .p-u 1 to 294 29 to 321 L31P R74K S77A tiling clone,   293/321
(91 %)
6 diff
(98.2 %id)
BM666968 eye, human retina Gene TBL1X, variant not shown       AAA This clone was ignored    
BM695891 eye, human retina Gene TBL1X, variant not shown         This clone was ignored    
BF092684 testis_normal Gene TBL1X, variant not shown         This clone was ignored    
CD675107 eye, lens Gene TBL1X, variant not shown              
BF888611 testis_normal Gene TBL1X, variant not shown         This clone was ignored    
DB275894 uterus Gene TBL1X, variant not shown       capped      
DB352169 uterus Gene TBL1X, variant not shown              
AU153117   Gene TBL1X, variant not shown         Suspected internal deletion, this clone was ignored    
AU131374   Gene TBL1X, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB361091 mammary gland Gene TBL1X, variant not shown              
DA646412 mammary gland Gene TBL1X, variant not shown       capped      
T86560 liver and spleen Gene TBL1X, variant not shown         Suspected internal deletion, this clone was ignored    
T86738 liver and spleen Gene TBL1X, variant not shown         Suspected internal deletion, this clone was ignored    
AA495941 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene TBL1X, variant not shown       fully sequenced, This clone was ignored    
AA495942 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene TBL1X, variant not shown       fully sequenced, This clone was ignored    
AW246911 lung, small cell carcinoma Gene TBL1X, variant not shown         Suspected internal deletion, this clone was ignored    
BI912551 leukocyte Gene TBL1X, variant not shown              
BQ708175 Spleen Gene TBL1X, variant not shown              
BQ712462 Spleen Gene TBL1X, variant not shown              
BU854759 ovary, teratocarcinoma, cell line Gene TBL1X, variant not shown              
CD643458 Embryonic Stem cells Gene TBL1X, variant not shown              
TI_57247343   Gene TBL1X, variant not shown              
DB055254 testis Gene TBL1X, variant not shown       capped Suspected internal deletion, this clone was ignored    
TI_154151540   Gene TBL1X, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m, .n-u, .o-u, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI