To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene TBC1D13TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
302 supporting clones for gene TBC1D13 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG716911 testis .a 1 to 569 8 to 580   tiling clone,   573/580
(98 %)
17 diff
(97.1 %id)
DC325060 brain .a 28 to 553 1 to 526       526/526
(100 %)
0 diff
(100 %id)
NM_018201.3   .a 28 to 3906 1 to 3879   RefSeq,   3879/3879
(100 %)
0 diff
(100 %id)
DC317864 amygdala .a 54 to 634 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC333926 hippocampus .a 54 to 606 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC334718 hippocampus .a 54 to 693 1 to 642       642/644
(99 %)
3 diff
(99.6 %id)
DB485626.
matches multiple genes
hypothalamus .a 54 to 381 1 to 328     also hits gene versher 328/328
(100 %)
0 diff
(100 %id)
DB501750.
matches multiple genes
hypothalamus .a 54 to 526 1 to 473     also hits gene versher 473/473
(100 %)
4 diff
(99.2 %id)
DC370407   .a 54 to 610 1 to 559       559/559
(100 %)
3 diff
(99.5 %id)
DC342717 thalamus .a 55 to 560 9 to 515       507/507
(100 %)
1 diff
(99.9 %id)
DC322059 brain .a 62 to 615 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC380946 placenta .a 62 to 593 1 to 532       532/532
(100 %)
3 diff
(99.5 %id)
BX425613 neuroblastoma .a 63 to 936 1 to 875       875/875
(100 %)
4 diff
(99.6 %id)
DC309945 cerebellum .a 64 to 617 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BG912524 anaplastic oligodendroglioma with 1p/19qloss, brain .a 69 to 782 1 to 721       721/721
(100 %)
15 diff
(98.0 %id)
BI257151 cervical carcinoma cell line, cervix .a 70 to 780 31 to 740       710/740
(95 %)
16 diff
(97.9 %id)
BM449494 leiomyosarcoma, uterus .a 72 to 697 1 to 626       626/1157
(54 %)
11 diff
(99.1 %id)
DC343399 thalamus .a 89 to 649 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC392808 breast, tumor tissue .a 89 to 491 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
AK289777 brain .a 92 to 1717 1 to 1626   tiling clone,   1626/1626
(100 %)
2 diff
(99.9 %id)
DC306794 cerebellum .a 92 to 647 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC307890 cerebellum .a 92 to 626 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
DC322509 brain .a 92 to 727 1 to 636       636/636
(100 %)
0 diff
(100 %id)
DC325088 brain .a 92 to 687 1 to 596       596/596
(100 %)
0 diff
(100 %id)
DC332866 hippocampus .a 92 to 636 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
DC333118 hippocampus .a 92 to 659 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC333146 hippocampus .a 92 to 658 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC334358 hippocampus .a 92 to 644 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC334637 hippocampus .a 92 to 647 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC334757 hippocampus .a 92 to 565 1 to 475       475/475
(100 %)
2 diff
(99.6 %id)
DC345389 tongue, tumor tissue .a 92 to 666 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC423411 uterus .a 92 to 639 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BC150311 Clones donated by RIKEN .a 95 to 3898 1 to 3808   tiling clone, AAA   3808/3808
(100 %)
11 diff
(99.8 %id)
AL514312 neuroblastoma, placenta .a 95 to 1038 7 to 944       938/944
(99 %)
26 diff
(97.3 %id)
DC354013 brain .a 97 to 688 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
DB480820.
matches multiple genes
hippocampus .a 97 to 595 1 to 499     also hits gene versher 499/499
(100 %)
1 diff
(99.8 %id)
DC382061 placenta .a 97 to 639 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
DC401663 testis .a 97 to 630 1 to 534       534/534
(100 %)
0 diff
(100 %id)
BX510171   .a 100 to 641 1 to 542       542/542
(100 %)
3 diff
(99.5 %id)
DC317210 amygdala .a 101 to 625 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
BI603260 brain, hypothalamus .a 101 to 693 60 to 665       606/709
(85 %)
22 diff
(96.9 %id)
TI_45210693   .a 101 to 693 145 to 750       606/794
(76 %)
22 diff
(97.3 %id)
DN999445   .a 101 to 586 1 to 486       486/486
(100 %)
3 diff
(99.4 %id)
CN426558 embryonic stem cells, cell lines H1, H7, andH9 .a 106 to 530 1 to 425       425/425
(100 %)
1 diff
(99.8 %id)
CN426560 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 107 to 849 1 to 743       743/743
(100 %)
2 diff
(99.8 %id)
BQ956861 large cell carcinoma, lung .a 109 to 903 1 to 807       807/888
(90 %)
20 diff
(97.8 %id)
BQ927278 large cell carcinoma, lung .a 109 to 862 1 to 767       767/975
(78 %)
33 diff
(96.7 %id)
DC369756   .a 111 to 684 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC369859   .a 111 to 689 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC321827 brain .a 119 to 674 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
TI_1971553947   .a 124 to 1227 127 to 1242     Submitted on the opposite strand 1116/1314
(84 %)
39 diff
(97.1 %id)
CR989692 T-Lymphocytes .a 124 to 902 1 to 783       783/783
(100 %)
5 diff
(99.4 %id)
BC014898 Uterus, leiomyosarcoma .a 129 to 3905 1 to 3790   tiling clone, available from MGC, AAA   3790/3790
(100 %)
10 diff
(99.8 %id)
BC136509 Testicle, PCR rescued clones .a 131 to 2659 1 to 2531   tiling clone,   2531/2531
(100 %)
6 diff
(99.8 %id)
DA725555   .a 140 to 701 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA317365 hippocampus .a 141 to 713 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DC325004 brain .a 145 to 740 1 to 596       596/596
(100 %)
0 diff
(100 %id)
BX955330   .a 148 to 597 1 to 450       450/450
(100 %)
3 diff
(99.4 %id)
DC409903 thymus .a 148 to 741 1 to 594       594/594
(100 %)
1 diff
(99.9 %id)
BE886607 leiomyosarcoma, uterus .a 150 to 877 1 to 723   available from MGC,   723/736
(98 %)
19 diff
(97.5 %id)
AB449899 brain .a 151 to 1353 1 to 1203       1203/1203
(100 %)
0 diff
(100 %id)
DA803478 brain .a 157 to 701 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA118549 cerebellum .a 170 to 704 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DC329954 hippocampus .a 187 to 766 1 to 580       580/580
(100 %)
0 diff
(100 %id)
CN426553 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 187 to 896 1 to 713       713/713
(100 %)
3 diff
(99.6 %id)
DC422570 uterus .a 210 to 760 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC335394 hippocampus .a 243 to 814 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BQ369050 placenta_normal .a 264 to 823 559 to 1       559/560
(99 %)
9 diff
(98.4 %id)
BQ369204 placenta_normal .a 264 to 823 559 to 1       559/560
(99 %)
9 diff
(98.4 %id)
AB209565 brain .a 285 to 1630 1 to 1346       1346/1346
(100 %)
2 diff
(99.9 %id)
BU844653 ovary, teratocarcinoma, cell line .a 294 to 1172 1 to 879       879/879
(100 %)
1 diff
(99.9 %id)
AK295183 brain .a 301 to 1534 1 to 1234       1234/1234
(100 %)
3 diff
(99.8 %id)
DC325407 brain .a 301 to 893 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BQ440977 melanotic melanoma, skin .a 364 to 1208 1 to 854       854/894
(95 %)
25 diff
(97.3 %id)
CN426561 embryonic stem cells, DMSO-treated H9 cellline .a 368 to 906 1 to 539       539/539
(100 %)
0 diff
(100 %id)
BP288067 lung .a 385 to 968 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AK307556   .a 402 to 1643 1 to 1245       1245/1245
(100 %)
3 diff
(99.8 %id)
DC363105   .a 402 to 918 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
TI_1752770776   .a 410 to 1485 1080 to 8       1073/1298
(82 %)
4 diff
(99.7 %id)
BQ368638 placenta_normal .a 414 to 843 433 to 1       433/434
(99 %)
28 diff
(93.6 %id)
BF086218 placenta_normal .a 423 to 824 36 to 437       402/437
(91 %)
9 diff
(98.0 %id)
CR999765 T-Lymphocytes .a 433 to 1126 1 to 694       694/694
(100 %)
2 diff
(99.8 %id)
TI_1971555015   .a 452 to 1522 1075 to 9       1067/1263
(84 %)
13 diff
(99.0 %id)
T11486   .a 534 to 693 1 to 160       160/160
(100 %)
0 diff
(100 %id)
BE613720 leiomyosarcoma, uterus .a 543 to 1284 1 to 741       741/878
(84 %)
18 diff
(98.0 %id)
BQ362174 stomach .a 575 to 832 1 to 261       261/267
(97 %)
20 diff
(92.6 %id)
TI_1971554063   .a 608 to 1728 18 to 1136       1119/1248
(89 %)
21 diff
(98.4 %id)
DB150202 thymus .a 623 to 1130 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DA742324   .a 694 to 1211 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA742329   .a 694 to 1195 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DA726069   .a 695 to 1257 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
CD629049   .a 784 to 1303 7 to 522       516/522
(98 %)
12 diff
(97.8 %id)
DA785303 brain .a 802 to 1379 2 to 582   capped   581/592
(98 %)
5 diff
(99.2 %id)
CD629048   .a 873 to 1488 618 to 2       617/618
(99 %)
2 diff
(99.7 %id)
DA766311 tongue .a 875 to 1435 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
T11485   .a 905 to 1068 1 to 164       164/164
(100 %)
0 diff
(100 %id)
BQ214909 melanotic melanoma, skin .a 919 to 1708 1 to 802       802/883
(90 %)
29 diff
(96.8 %id)
DA743599   .a 927 to 1447 2 to 522   capped   521/521
(100 %)
4 diff
(99.3 %id)
DA295765 hippocampus .a 933 to 1508 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
AK027457   .a 960 to 3898 1 to 2943   available from FLJ,   2943/2943
(100 %)
16 diff
(99.5 %id)
DA728452   .a 965 to 1619 2 to 654   capped   653/655
(99 %)
7 diff
(99.0 %id)
CO247505 Chondrosarcoma Lung Metastasis cell lines, lung .a 981 to 1657 8 to 678       671/793
(84 %)
24 diff
(97.0 %id)
CN426563 embryonic stem cells, cell lines H1, H7, andH9 .a 1065 to 1601 10 to 546       537/546
(98 %)
8 diff
(98.6 %id)
DA704884   .a 1167 to 1657 2 to 493   capped   492/492
(100 %)
3 diff
(99.4 %id)
DA197577 brain .a 1172 to 1702 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
CB045470 colon, juvenile granulosa tumor .a 1177 to 1591 12 to 429       418/429
(97 %)
8 diff
(98.2 %id)
BM547187 brain, hippocampus .a 1179 to 1640 15 to 475       461/1250
(36 %)
9 diff
(99.3 %id)
CN426555 embryonic stem cells, DMSO-treated H9 cellline .a 1183 to 1846 1 to 666       666/666
(100 %)
7 diff
(99.0 %id)
DA286442 corpus callosum .a 1198 to 1760 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
TI_1971558887   .a 1201 to 2127 952 to 12       941/1183
(79 %)
4 diff
(99.7 %id)
CX755866 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1212 to 1885 1 to 674     Submitted on the opposite strand 674/695
(96 %)
9 diff
(98.8 %id)
DA071209 cerebellum .a 1218 to 1759 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
DA890758 rectum .a 1224 to 1776 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA296650 hippocampus .a 1233 to 1810 2 to 582   capped   581/581
(100 %)
3 diff
(99.5 %id)
DA740812   .a 1234 to 1742 2 to 510   capped   509/509
(100 %)
5 diff
(99.1 %id)
DA177924 amygdala .a 1237 to 1798 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
DA205457 brain .a 1240 to 1815 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
CD629050   .a 1260 to 1858 618 to 20       599/619
(96 %)
3 diff
(99.6 %id)
CD629051   .a 1266 to 1852 9 to 594       586/621
(94 %)
12 diff
(98.1 %id)
DA533098 brain .a 1274 to 1767 2 to 499   capped   498/498
(100 %)
4 diff
(99.2 %id)
TI_1971554061   .a 1285 to 2302 39 to 1071       1033/1280
(80 %)
33 diff
(97.5 %id)
DA537842 Kidney .a 1301 to 1865 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA619930   .a 1309 to 1893 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DB001131 breast, tumor tissue .a 1384 to 1897 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
BI255773 cervical carcinoma cell line, cervix .a 1434 to 1937 1 to 506       506/834
(60 %)
8 diff
(99.1 %id)
CV809258 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1451 to 1939 1 to 489       489/899
(54 %)
10 diff
(98.9 %id)
DA946087 Spleen .a 1515 to 2088 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
CN426554 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1519 to 2079 1 to 563       563/563
(100 %)
4 diff
(99.3 %id)
DA182166 amygdala .a 1745 to 2271 2 to 544   capped   543/543
(100 %)
8 diff
(98.6 %id)
AW881326 ovary .a 1767 to 2087 335 to 6       330/335
(98 %)
0 diff
(100 %id)
DA272384 caudate nucleus .a 1824 to 2260 2 to 440   capped   439/439
(100 %)
1 diff
(99.8 %id)
DA487874 brain .a 1880 to 2429 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
BG702292 brain, hippocampus .a 1889 to 2758 1 to 887       887/964
(92 %)
86 diff
(91.1 %id)
BG338819 leiomyosarcoma cell line, uterus .a 1912 to 2396 1 to 487       487/646
(75 %)
5 diff
(99.3 %id)
BM827558 stomach .a 1915 to 2405 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BQ303751 breast .a 1918 to 2128 16 to 226       211/229
(92 %)
3 diff
(98.7 %id)
BP208052 cerebellum .a 1921 to 2503 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP306728   .a 1921 to 2484 1 to 564       564/564
(100 %)
0 diff
(100 %id)
AU122437 mammary gland .a 1923 to 2647 2 to 726   capped   725/725
(100 %)
1 diff
(99.9 %id)
BF306922 muscle, rhabdomyosarcoma .a 1928 to 2654 1 to 711       711/819
(86 %)
22 diff
(97.4 %id)
BP304400   .a 1929 to 2510 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DA627731 Kidney .a 1957 to 2495 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
TI_57167880   .a 2003 to 2788 33 to 810       778/810
(96 %)
6 diff
(99.3 %id)
BI837201 pooled pancreas and spleen .a 2004 to 2788 1 to 777       777/777
(100 %)
12 diff
(98.5 %id)
TI_1971558643   .a 2012 to 2659 15 to 661       647/1220
(53 %)
2 diff
(99.9 %id)
TI_1971558765   .a 2012 to 2659 16 to 662       647/1223
(52 %)
2 diff
(99.9 %id)
DR158960 human embryonic stem cells differentiated toan early endodermal cell type .a 2012 to 2672 1 to 660       660/660
(100 %)
5 diff
(99.3 %id)
TI_154188437   .a 2021 to 2950 124 to 1047       924/935
(98 %)
52 diff
(94.5 %id)
BU956688 adenocarcinoma, cell line, breast .a 2093 to 2964 1 to 887       887/894
(99 %)
27 diff
(97.0 %id)
CN426557 embryonic stem cells, DMSO-treated H9 cellline .a 2105 to 2824 1 to 720       720/720
(100 %)
1 diff
(99.9 %id)
BU173724 hepatocellular carcinoma, cell line, Liver .a 2150 to 3096 1 to 960       960/1112
(86 %)
32 diff
(97.2 %id)
BE386978 melanotic melanoma, skin .a 2291 to 2869 36 to 614       579/614
(94 %)
6 diff
(99.1 %id)
BP330781 rectum .a 2310 to 2884 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
CD671960 eye, Iris .a 2313 to 2923 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BP381433 adipose tissue .a 2326 to 2950 1 to 625       625/627
(99 %)
5 diff
(99.3 %id)
BE546547 cervical carcinoma cell line, cervix .a 2390 to 3117 1 to 719       719/721
(99 %)
13 diff
(98.2 %id)
CN426556 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2391 to 3029 1 to 639   tiling clone,   639/639
(100 %)
1 diff
(99.9 %id)
H11907 whole brain .a 2397 to 2766 1 to 374       374/408
(91 %)
11 diff
(97.4 %id)
BQ684039 melanotic melanoma, cell line, skin .a 2419 to 3122 18 to 723       706/995
(70 %)
24 diff
(97.6 %id)
CB150924 cervix, Uterine .a 2493 to 2947 1 to 454       454/454
(100 %)
6 diff
(98.7 %id)
BE869405 adenocarcinoma, colon .a 2496 to 3239 1 to 740       740/813
(91 %)
21 diff
(97.5 %id)
BX350770   .a 2597 to 3490 879 to 4       876/924
(94 %)
0 diff
(100 %id)
BG248905 hypernephroma, cell line, Kidney .a 2601 to 3367 1 to 759       759/947
(80 %)
46 diff
(95.2 %id)
BM562196 amelanotic melanoma, cell line, skin .a 2647 to 3538 1 to 901       901/1055
(85 %)
26 diff
(97.6 %id)
DB135199 thymus .a 2665 to 3215 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
BM051437 eye, normal pigmented retinal epithelium .a 2681 to 2907 482 to 725       700/1001
(69 %)
70 diff
(93.1 %id)
BM463601 leiomyosarcoma, uterus .a 2681 to 3619 1 to 943       943/1035
(91 %)
33 diff
(96.9 %id)
BM463879 melanotic melanoma, skin .a 2713 to 3707 1 to 1008       1008/1101
(91 %)
34 diff
(97.0 %id)
T16911   .a 2766 to 3087 12 to 333       322/333
(96 %)
5 diff
(98.5 %id)
TI_57233195   .a 2777 to 3699 28 to 945   tiling clone,   918/945
(97 %)
18 diff
(98.1 %id)
BI906748 leukocyte .a 2784 to 3699 1 to 911       911/911
(100 %)
13 diff
(98.6 %id)
BQ672940 epidermoid carcinoma, cell line, salivary gland .a 2826 to 3683 1 to 859       859/860
(99 %)
4 diff
(99.6 %id)
BQ668379 epidermoid carcinoma, cell line, salivary gland .a 2826 to 3531 1 to 701       701/858
(81 %)
15 diff
(98.3 %id)
BE388207 endometrium, adenocarcinoma cell line, uterus .a 2827 to 3462 1 to 635       635/636
(99 %)
5 diff
(99.3 %id)
AA486651 lung .a 2844 to 3263 1 to 419       419/419
(100 %)
3 diff
(99.3 %id)
BG469723 adenocarcinoma cell line, colon .a 2913 to 2994 558 to 642       608/644
(94 %)
37 diff
(94.3 %id)
EL954680 eyeball .a 2922 to 3221 1 to 301       301/301
(100 %)
6 diff
(98.1 %id)
CN426562 embryonic stem cells, DMSO-treated H9 cellline .a 2944 to 3556 1 to 614       614/614
(100 %)
3 diff
(99.6 %id)
CN426559 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2959 to 3132 1 to 174       174/174
(100 %)
1 diff
(99.5 %id)
N83389   .a 2980 to 3227 1 to 243       243/243
(100 %)
12 diff
(95.1 %id)
BU527929 epidermoid carcinoma, cell line, lung .a 3009 to 3790 36 to 830       795/959
(82 %)
23 diff
(97.7 %id)
BM465683 lymph, lymphoma, cell line .a 3034 to 3904 69 to 946       878/1106
(79 %)
27 diff
(97.6 %id)
BM806189 leiomyosarcoma, uterus .a 3038 to 3861 14 to 841       828/1097
(75 %)
10 diff
(99.1 %id)
BG545512 lung .a 3065 to 3702 1 to 644       644/1141
(56 %)
21 diff
(98.2 %id)
BI004114 head_normal .a 3075 to 3440 22 to 387       366/387
(94 %)
6 diff
(98.5 %id)
CF144175 lymph .a 3080 to 3215 1 to 136       136/136
(100 %)
11 diff
(92.0 %id)
BX094346 heart .a 3087 to 3838 1 to 752       752/752
(100 %)
1 diff
(99.9 %id)
W76312 heart .a 3087 to 3488 1 to 404   fully sequenced,   404/404
(100 %)
8 diff
(98.1 %id)
AA029989 uterus .a 3126 to 3527 9 to 419   fully sequenced,   411/419
(98 %)
10 diff
(97.7 %id)
BE614605 leiomyosarcoma, uterus .a 3131 to 3867 762 to 20       743/978
(75 %)
32 diff
(96.8 %id)
AW245915 lung, small cell carcinoma .a 3174 to 3647 3 to 476   fully sequenced,   474/476
(99 %)
6 diff
(98.8 %id)
AA039649 heart .a 3181 to 3501 1 to 321   fully sequenced,   321/321
(100 %)
1 diff
(99.7 %id)
TI_149285341   .a 3213 to 3905 813 to 123   AAA   691/750
(92 %)
16 diff
(97.9 %id)
BQ005668 Chondrosarcoma, Left Pubic Bone .a 3216 to 3898 701 to 19   AAA   683/683
(100 %)
2 diff
(99.8 %id)
FN059602 breast carcinoma .a 3218 to 3292 1 to 75       75/75
(100 %)
5 diff
(93.4 %id)
TI_149284355   .a 3260 to 3898 731 to 93   AAA   639/809
(78 %)
0 diff
(100 %id)
BM553260 amelanotic melanoma, cell line, skin .a 3272 to 3904 1 to 633       633/640
(98 %)
1 diff
(99.9 %id)
BU680517 lung .a 3289 to 3898 628 to 19   AAA   610/610
(100 %)
0 diff
(100 %id)
AL582739 B cells from Burkitt lymphoma .a 3330 to 3863 541 to 1       541/1147
(47 %)
18 diff
(98.5 %id)
DC425971 tongue, tumor tissue .a 3332 to 3898 567 to 1       567/567
(100 %)
0 diff
(100 %id)
AU148017 mammary gland .a 3340 to 3898 557 to 1       557/560
(99 %)
12 diff
(97.9 %id)
BF110417 carcinoid, lung .a 3350 to 3900 554 to 4       551/554
(99 %)
0 diff
(100 %id)
AA090643   .a 3369 to 3631 1 to 252       252/264
(95 %)
10 diff
(96.3 %id)
AA915989 adenocarcinoma, colon .a 3372 to 3898 528 to 1       528/528
(100 %)
1 diff
(99.9 %id)
AI207627 Liver .a 3374 to 3898 1 to 524   AAA   524/524
(100 %)
2 diff
(99.7 %id)
BG898313 cartilage .a 3380 to 3630 136 to 386       251/320
(78 %)
1 diff
(99.7 %id)
BF792774 adrenal cortex carcinoma, cell line, adrenal gland .a 3387 to 3898 1 to 511   AAA   511/511
(100 %)
1 diff
(99.9 %id)
AI694528 carcinoid, lung .a 3390 to 3897 508 to 1       508/508
(100 %)
2 diff
(99.7 %id)
BE671211 carcinoid, lung .a 3390 to 3900 514 to 4       511/514
(99 %)
0 diff
(100 %id)
BF196192 carcinoid, lung .a 3390 to 3900 512 to 2       511/512
(99 %)
0 diff
(100 %id)
AW300458 Kidney .a 3391 to 3898 508 to 1       508/508
(100 %)
0 diff
(100 %id)
AW007576 colon .a 3392 to 3900 514 to 7       508/514
(98 %)
0 diff
(100 %id)
BM984861 lung .a 3396 to 3905 528 to 19   AAA   510/510
(100 %)
2 diff
(99.7 %id)
BE220871 carcinoid, lung .a 3402 to 3897 496 to 1       496/496
(100 %)
1 diff
(99.8 %id)
CB045469 colon, juvenile granulosa tumor .a 3405 to 3898 510 to 17   AAA   494/494
(100 %)
1 diff
(99.8 %id)
CA444413 lung, Metastatic Chondrosarcoma .a 3407 to 3898 510 to 19   AAA   492/492
(100 %)
0 diff
(100 %id)
BF115750 carcinoid, lung .a 3415 to 3900 490 to 4       487/490
(99 %)
0 diff
(100 %id)
BE046876 squamous cell carcinoma, tongue .a 3426 to 3720 295 to 1       295/295
(100 %)
0 diff
(100 %id)
AW015739   .a 3433 to 3898 483 to 18   AAA   466/467
(99 %)
0 diff
(100 %id)
AA025584 heart .a 3443 to 3906 481 to 3       479/483
(99 %)
0 diff
(100 %id)
AA011692 liver and spleen .a 3448 to 3898 453 to 1       453/453
(100 %)
2 diff
(99.6 %id)
AI025934 parathyroid gland, parathyroid tumor .a 3449 to 3900 455 to 5       451/455
(99 %)
0 diff
(100 %id)
W72286 heart .a 3458 to 3899 443 to 1   fully sequenced,   443/443
(100 %)
3 diff
(99.4 %id)
H11908 whole brain .a 3461 to 3898 460 to 12   AAA   449/453
(99 %)
12 diff
(97.4 %id)
AL514311 neuroblastoma, placenta .a 3463 to 3903 441 to 1       441/441
(100 %)
15 diff
(96.6 %id)
AA039650 heart .a 3471 to 3899 433 to 1   fully sequenced,   433/433
(100 %)
3 diff
(99.4 %id)
AI935956 normal prostate, Prostate .a 3475 to 3898 438 to 15   AAA   424/424
(100 %)
0 diff
(100 %id)
AA486554 lung .a 3476 to 3900 426 to 2       425/426
(99 %)
0 diff
(100 %id)
AA831720 germinal center B cell .a 3476 to 3905 450 to 21   tiling clone, AAA   430/430
(100 %)
0 diff
(100 %id)
AI818812 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3482 to 3904 433 to 11   AAA   423/423
(100 %)
1 diff
(99.8 %id)
AA680101 liver and spleen .a 3483 to 3898 415 to 1       415/415
(100 %)
1 diff
(99.8 %id)
AA011695 liver and spleen .a 3490 to 3898 414 to 1       414/419
(98 %)
5 diff
(98.9 %id)
H13458 placenta .a 3492 to 3896 16 to 426       411/436
(94 %)
13 diff
(97.1 %id)
BQ024503 placenta .a 3492 to 3898 425 to 19   AAA   407/421
(96 %)
0 diff
(100 %id)
CB051140 Prostate .a 3495 to 3898 435 to 32   AAA   404/409
(98 %)
2 diff
(99.6 %id)
AA029901 uterus .a 3497 to 3900 405 to 2   fully sequenced,   404/405
(99 %)
0 diff
(100 %id)
CB050282 Prostate .a 3503 to 3900 11 to 408       398/409
(97 %)
1 diff
(99.8 %id)
AW075708 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 3504 to 3720 217 to 1       217/217
(100 %)
8 diff
(96.4 %id)
AI636237 Kidney .a 3510 to 3905 421 to 26   AAA   396/396
(100 %)
1 diff
(99.8 %id)
BU754041 placenta .a 3510 to 3898 407 to 19   AAA   389/389
(100 %)
0 diff
(100 %id)
AI299469 carcinoid, lung .a 3516 to 3897 382 to 1       382/382
(100 %)
0 diff
(100 %id)
BI087470 cervix .a 3522 to 3898 1 to 378   AAA   378/378
(100 %)
1 diff
(99.8 %id)
BF435918 pooled .a 3524 to 3900 381 to 5       377/381
(98 %)
0 diff
(100 %id)
AI611076 pooled germ cell tumors .a 3532 to 3898 367 to 1       367/367
(100 %)
0 diff
(100 %id)
BQ022016 placenta .a 3532 to 3898 385 to 19   AAA   367/367
(100 %)
0 diff
(100 %id)
R36655 placenta .a 3543 to 3869 336 to 1       336/376
(89 %)
12 diff
(96.9 %id)
AA618565 normal prostate, Prostate .a 3549 to 3900 352 to 1       352/352
(100 %)
0 diff
(100 %id)
AI935396 Kidney .a 3550 to 3904 362 to 8       355/362
(98 %)
0 diff
(100 %id)
AW236760 Kidney .a 3550 to 3904 362 to 8       355/362
(98 %)
0 diff
(100 %id)
AI202127 anaplastic oligodendroglioma, brain .a 3568 to 3900 338 to 6       333/338
(98 %)
0 diff
(100 %id)
BE538962 cervix .a 3570 to 3905 1 to 340       340/348
(97 %)
8 diff
(97.8 %id)
AA969973 pooled .a 3572 to 3900 331 to 3       329/331
(99 %)
0 diff
(100 %id)
AW194641 Kidney .a 3574 to 3896 341 to 16       326/341
(95 %)
0 diff
(100 %id)
TI_151700678   .a 3582 to 3898 413 to 97   AAA   317/945
(33 %)
0 diff
(100 %id)
BM696097 eye, human retina .a 3583 to 3898 1 to 316       316/316
(100 %)
0 diff
(100 %id)
AA649831 normal prostate, Prostate .a 3593 to 3898 306 to 1       306/306
(100 %)
3 diff
(99.1 %id)
AA948173 pooled germ cell tumors .a 3605 to 3883 279 to 1       279/279
(100 %)
0 diff
(100 %id)
BE468129 carcinoid, lung .a 3612 to 3903 292 to 1       292/292
(100 %)
0 diff
(100 %id)
AW245657 lung, small cell carcinoma .a 3617 to 3898 292 to 11   fully sequenced, AAA   282/282
(100 %)
0 diff
(100 %id)
AI473233 Kidney .a 3630 to 3898 269 to 1       269/269
(100 %)
0 diff
(100 %id)
AI572852 Kidney .a 3632 to 3898 285 to 19   AAA   267/267
(100 %)
0 diff
(100 %id)
CD671959 eye, Iris .a 3641 to 3905 282 to 18   AAA   265/265
(100 %)
0 diff
(100 %id)
AI223351   .a 3642 to 3900 260 to 2       259/260
(99 %)
0 diff
(100 %id)
AI936719 anaplastic oligodendroglioma, brain .a 3645 to 3900 261 to 6       256/261
(98 %)
0 diff
(100 %id)
BF745399 breast .a 3692 to 3862 19 to 190       172/205
(83 %)
13 diff
(93.7 %id)
BF745481 breast .a 3701 to 3862 1 to 160       160/175
(91 %)
8 diff
(95.5 %id)
BE548757 cervical carcinoma cell line, cervix .a 3729 to 3894 1 to 164       164/164
(100 %)
3 diff
(98.2 %id)
D12129 Liver .a 3749 to 3905 1 to 157       157/157
(100 %)
0 diff
(100 %id)
AW242824 Kidney .a 3751 to 3905 167 to 11   AAA   157/157
(100 %)
2 diff
(98.8 %id)
FN109320 breast carcinoma .a 3810 to 3898 1 to 87       87/88
(98 %)
3 diff
(96.6 %id)
EC542268 Prostate .a 3838 to 3900 1 to 64       64/64
(100 %)
4 diff
(93.8 %id)
DC335777 hippocampus .b 1 to 577 1 to 578   tiling clone,   578/578
(100 %)
1 diff
(99.9 %id)
AK001605   .b 55 to 3432 1 to 3384   tiling clone, available from FLJ,   3384/3384
(100 %)
10 diff
(99.8 %id)
AU130903   .b 56 to 815 2 to 760   capped   759/759
(100 %)
5 diff
(99.4 %id)
AU152771   .b 2904 to 3432 531 to 1       531/531
(100 %)
16 diff
(97.0 %id)
AK123828   .c 1 to 3508 2 to 3511 exact tiling clone, available from FLJ,   3511/3511
(100 %)
7 diff
(99.9 %id)
DA720476   .c 1 to 562 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB324244   .c 2960 to 3508 549 to 1       549/549
(100 %)
0 diff
(100 %id)
DC296522 synovial membrane tissue from rheumatioidarthritis .d 12 to 564 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC403111 testis .d 12 to 562 1 to 551   tiling clone,   551/551
(100 %)
0 diff
(100 %id)
DC415764 trachea .d 12 to 552 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC415592 trachea .d 60 to 513 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
BI224625 cervical carcinoma cell line, cervix .d 94 to 488 144 to 538       509/538
(94 %)
7 diff
(98.7 %id)
DC346652 tongue, tumor tissue .d 133 to 687 1 to 555 exact tiling clone,   555/555
(100 %)
0 diff
(100 %id)
DA931190 Spleen .e 1 to 685 2 to 686   tiling clone, capped   685/693
(98 %)
4 diff
(99.5 %id)
CV377959 colon .e 276 to 459 1 to 184       184/189
(97 %)
10 diff
(94.8 %id)
BF836582 head_neck .e 373 to 574 11 to 214   tiling clone,   204/214
(95 %)
6 diff
(97.2 %id)
DB332395 Spleen .e 2961 to 3406 447 to 1   tiling clone,   447/453
(98 %)
9 diff
(98.1 %id)
DA213474 brain .f 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
22 diff
(96.0 %id)
BG706350 brain, hypothalamus .f 169 to 960 1 to 796 H26T W27G E28R V29W V30W ... tiling clone,   796/796
(100 %)
35 diff
(95.7 %id)
BI601464 brain, hypothalamus .f 169 to 939 1 to 772   tiling clone,   772/797
(96 %)
33 diff
(95.9 %id)
DB494518.
matches multiple genes
hypothalamus .f 174 to 685 1 to 512   tiling clone, also hits gene versher 512/512
(100 %)
3 diff
(99.5 %id)
DB496394.
matches multiple genes
hypothalamus .f 174 to 643 1 to 470   tiling clone, also hits gene versher 470/470
(100 %)
5 diff
(99.0 %id)
TI_45214036   .f 174 to 939 90 to 856       767/881
(87 %)
26 diff
(97.1 %id)
DA106130 cerebellum .f 182 to 736 2 to 556   tiling clone, capped   555/555
(100 %)
5 diff
(99.1 %id)
DB151751 thymus .f 437 to 944 2 to 513   tiling clone, capped   512/515
(99 %)
6 diff
(98.9 %id)
DA135273 alzheimer cortex .g 1 to 554 3 to 556 T2A P81R tiling clone, capped   555/555
(100 %)
3 diff
(99.5 %id)
DB499813 hypothalamus .h 1 to 464 1 to 464 exact tiling clone, AAA   464/464
(100 %)
0 diff
(100 %id)
DB570957 hypothalamus .h 1 to 464 1 to 464 exact   Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
CF137991 lymph .i 1 to 498 8 to 505       498/505
(98 %)
6 diff
(98.9 %id)
TI_154167749   .i 1 to 680 80 to 763 E78G R79E A80R S81L W82M ... tiling clone,   684/786
(87 %)
14 diff
(98.3 %id)
DA642271 Liver .j 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
3 diff
(99.5 %id)
BU509036 leiomyosarcoma, uterus .k 1 to 817 9 to 832 S15T E42D R63M E87* tiling clone,   824/903
(91 %)
41 diff
(95.5 %id)
CX762599 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .l-u 1 to 695 686 to 1   tiling clone,   686/738
(92 %)
11 diff
(98.6 %id)
DA798542 brain .l-u 70 to 625 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DC342722 thalamus .m 1 to 556 1 to 556 G39X L40T R41A tiling clone,   556/556
(100 %)
2 diff
(99.7 %id)
DA399452 thalamus .n 1 to 556 2 to 557 N8S S34X tiling clone, capped   556/556
(100 %)
3 diff
(99.5 %id)
DC416731 trachea .o 1 to 555 5 to 559 exact tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
DB066095 testis .p 1 to 553 2 to 555 P30S tiling clone, capped   554/554
(100 %)
3 diff
(99.5 %id)
DC334273 hippocampus .q 1 to 523 1 to 523 exact tiling clone,   523/523
(100 %)
1 diff
(99.9 %id)
BX952601   Gene TBC1D13, variant not shown         Suspected internal deletion, this clone was ignored    
BC132817 Brain, cerebellum, PCR rescued clones Gene TBC1D13, variant not shown         Suspected internal deletion, this clone was ignored    
AL561566 B cells from Burkitt lymphoma Gene TBC1D13, variant not shown         Suspected internal deletion, this clone was ignored    
AL602593 human skeletal muscle Gene TBC1D13, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1752769328   Gene TBC1D13, variant not shown         Suspected internal deletion, this clone was ignored    
R05471.
matches multiple genes
whole brain Gene TBC1D13, variant not shown         This clone was ignored, also hits gene bovawby    
R05471.
matches multiple genes
whole brain Gene bovawby, variant not shown         This clone was ignored, also hits gene bovawby    
R05578.
matches multiple genes
whole brain Gene TBC1D13, variant not shown         This clone was ignored, also hits gene bovawby    
R05578.
matches multiple genes
whole brain Gene bovawby, variant not shown         This clone was ignored, also hits gene bovawby    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o, .p, .q Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C