To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene TBC1D1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
263 representative clones for gene TBC1D1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK295746 hippocampus .a 1 to 3944 2 to 3945 S74P L1146H tiling clone, AAA   3945/3945
(100 %)
4 diff
(99.9 %id)
DA181914 amygdala .a 1732 to 2289 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BF951177 nervous_normal .a 1977 to 2496 518 to 1       518/518
(100 %)
20 diff
(96.2 %id)
BF951166 nervous_normal .a 2067 to 2357 286 to 1       286/286
(100 %)
22 diff
(92.4 %id)
BF954799 nervous_normal .a 2193 to 2449 1 to 257       257/263
(97 %)
17 diff
(93.6 %id)
DA135214 alzheimer cortex .a 2287 to 2833 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
Z41904 brain, total brain .a 2308 to 2577 1 to 270       270/270
(100 %)
0 diff
(100 %id)
H24270 whole brain .a 2308 to 2698 1 to 391       391/495
(78 %)
6 diff
(98.8 %id)
CF552178 Pooled muscle (cardiac and skeletal) .a 2308 to 3196 29 to 921       893/921
(96 %)
16 diff
(98.3 %id)
CD742572 Alveolar Macrophage, lung .a 3260 to 3944 704 to 19   AAA   686/686
(100 %)
1 diff
(99.9 %id)
CF135981 lymph .a 3261 to 3951 720 to 30   tiling clone, AAA Submitted on the opposite strand 691/691
(100 %)
0 diff
(100 %id)
CA415781 Chondrosarcoma Cell line .a 3262 to 3944 701 to 19   AAA   683/683
(100 %)
2 diff
(99.8 %id)
Z38201 brain, total brain .a 3750 to 3950 204 to 1       204/204
(100 %)
3 diff
(98.6 %id)
DB036208 testis .b 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
BC050321 Brain, hippocampus .b 3 to 4148 1 to 4146 Q730K tiling clone, available from MGC, AAA   4146/4146
(100 %)
3 diff
(100.0 %id)
NM_015173.2   .b 15 to 5702 1 to 5688 exact RefSeq,   5688/5688
(100 %)
0 diff
(100 %id)
DR006959 Spleen .b 32 to 713 1 to 682       682/682
(100 %)
6 diff
(99.2 %id)
BC029950 Brain, Lung, Testis, adult, pooled whole .b 56 to 897 1 to 842   available from MGC,   842/842
(100 %)
1 diff
(99.9 %id)
DA326983 hippocampus .b 178 to 785 2 to 609   capped   608/616
(98 %)
5 diff
(99.2 %id)
DA340021 hippocampus .b 202 to 801 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
BX097378 colon, colon tumor, RER+ .b 227 to 734 1 to 508       508/508
(100 %)
0 diff
(100 %id)
AI739029 colon, colon tumor, RER+ .b 355 to 866 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AB449881 brain .b 358 to 3864 1 to 3507 exact     3507/3507
(100 %)
1 diff
(100.0 %id)
DA322022 hippocampus .b 359 to 902 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
AA279523 germinal center B cell .b 433 to 866 434 to 1       434/434
(100 %)
0 diff
(100 %id)
AI218311 pooled .b 890 to 1306 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
BE675153 B-cell, chronic lymphotic leukemia .b 907 to 1568 1 to 662     Submitted on the opposite strand 662/672
(98 %)
7 diff
(99.0 %id)
AI433664 Kidney .b 915 to 1262 1 to 348     Submitted on the opposite strand 348/348
(100 %)
0 diff
(100 %id)
AW772402 Kidney .b 925 to 1551 1 to 627     Submitted on the opposite strand 627/627
(100 %)
1 diff
(99.9 %id)
AW043925 pooled .b 926 to 1568 1 to 643     Submitted on the opposite strand 643/806
(79 %)
11 diff
(98.7 %id)
AW173375 pooled .b 926 to 1568 1 to 643     Submitted on the opposite strand 643/665
(96 %)
3 diff
(99.6 %id)
AA083436   .b 1008 to 1335 1 to 324       324/324
(100 %)
4 diff
(98.8 %id)
BU180676 eye, retinoblastoma .b 1019 to 1886 1 to 872       872/873
(99 %)
11 diff
(98.8 %id)
BM803165 duodenal adenocarcinoma, cell line, small intestine .b 1119 to 2122 1 to 1016       1016/1033
(98 %)
22 diff
(97.9 %id)
BM466841 eye, retinoblastoma .b 1158 to 1885 34 to 771       738/1161
(63 %)
29 diff
(97.6 %id)
BC014529 Placenta, choriocarcinoma .b 1162 to 4148 1 to 2987   tiling clone, available from MGC, AAA   2987/2987
(100 %)
0 diff
(100 %id)
DA792044 brain .b 1166 to 1464 2 to 300   capped   299/299
(100 %)
0 diff
(100 %id)
BE279997 choriocarcinoma, placenta .b 1181 to 1855 1 to 666       666/714
(93 %)
17 diff
(97.7 %id)
BQ929438 epidermoid carcinoma, cell line, lung .b 1184 to 2059 17 to 893       877/894
(98 %)
9 diff
(99.0 %id)
BC053648 Lymph, lymphoma .b 1187 to 4147 1 to 2961   available from MGC, AAA   2961/2961
(100 %)
0 diff
(100 %id)
BM476629 lymph, lymphoma, cell line .b 1187 to 2052 31 to 911   available from MGC,   881/1121
(78 %)
33 diff
(97.1 %id)
CN335379 embryonic stem cells, DMSO-treated H9 cellline .b 1224 to 1726 1 to 503       503/503
(100 %)
0 diff
(100 %id)
BQ062431 lymph, lymphoma, cell line .b 1249 to 2277 1 to 1033       1033/1055
(97 %)
37 diff
(96.5 %id)
BQ055838 lymph, lymphoma, cell line .b 1252 to 2236 1 to 1001       1001/1057
(94 %)
34 diff
(96.8 %id)
BQ670019 epidermoid carcinoma, cell line, salivary gland .b 1256 to 2106 1 to 862       862/864
(99 %)
20 diff
(97.7 %id)
BQ672157 epidermoid carcinoma, cell line, salivary gland .b 1256 to 2191 1 to 936       936/936
(100 %)
15 diff
(98.4 %id)
BQ670421 epidermoid carcinoma, cell line, salivary gland .b 1256 to 2146 1 to 906       906/907
(99 %)
28 diff
(97.0 %id)
BE884440 leiomyosarcoma, uterus .b 1365 to 1988 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
BE513375 Burkitt lymphoma, lymph .b 1390 to 2043 1 to 649       649/649
(100 %)
6 diff
(99.1 %id)
BE560392 Burkitt lymphoma, lymph .b 1390 to 2115 1 to 721       721/722
(99 %)
14 diff
(98.1 %id)
BE560184 Burkitt lymphoma, lymph .b 1408 to 2169 1 to 759       759/795
(95 %)
21 diff
(97.4 %id)
BG424359 Kidney, renal cell adenocarcinoma .b 1434 to 2098 8 to 671       664/748
(88 %)
17 diff
(97.8 %id)
CN335384 embryonic stem cells, cell lines H1, H7, andH9 .b 1481 to 2191 1 to 712       712/712
(100 %)
3 diff
(99.6 %id)
AW239183 lung, cell line .b 1511 to 2136 1 to 626       626/626
(100 %)
3 diff
(99.6 %id)
BQ711782 Spleen .b 1512 to 2407 1 to 899       899/915
(98 %)
8 diff
(99.2 %id)
AB029031 brain .b 1573 to 4148 1 to 2576   available from KIAA,   2576/2576
(100 %)
0 diff
(100 %id)
AW732976 Burkitt lymphoma, lymph .b 1617 to 2221 1 to 605       605/605
(100 %)
5 diff
(99.2 %id)
BX489540   .b 1651 to 2349 1 to 697       697/697
(100 %)
2 diff
(99.8 %id)
DA941400 Spleen .b 1690 to 2284 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
BM460573 leiomyosarcoma, uterus .b 1697 to 2416 13 to 732   AAA   720/1103
(65 %)
15 diff
(98.7 %id)
DN996725 breast cancer, Mammary gland (cancer tissue) .b 1698 to 2304 9 to 615       607/615
(98 %)
6 diff
(99.1 %id)
BU538402 adenocarcinoma, cell line, breast .b 1703 to 2633 1 to 933       933/934
(99 %)
11 diff
(98.9 %id)
BU538403 adenocarcinoma, cell line, breast .b 1703 to 2593 1 to 894       894/959
(93 %)
11 diff
(98.9 %id)
DA439588 tongue, tumor tissue .b 1705 to 2292 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BX462183 B cells (Ramos cell line) .b 1737 to 2756 1 to 1015       1015/1016
(99 %)
11 diff
(99.0 %id)
BM802671 embryonal carcinoma, cell line, testis .b 1737 to 2593 1 to 863       863/1156
(74 %)
35 diff
(97.0 %id)
AK027355 whole embryo, mainly body .b 1801 to 4162 1 to 2362   available from FLJ,   2362/2362
(100 %)
1 diff
(100.0 %id)
DA572695 whole embryo, mainly body .b 1802 to 2593 2 to 794   capped   793/882
(89 %)
6 diff
(99.4 %id)
DB284239 uterus .b 1809 to 2351 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA859787 placenta .b 1830 to 2393 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP204909 coronary artery .b 1832 to 2416 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
DB027566 testis .b 1847 to 2425 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BG746377 adenocarcinoma cell line, colon .b 1858 to 2652 1 to 799       799/800
(99 %)
13 diff
(98.4 %id)
BG258116 embryonal carcinoma, cell line, testis .b 1869 to 2639 1 to 765       766/948
(80 %)
25 diff
(97.4 %id)
BG029927 breast, mammary adenocarcinoma, cell line .b 1882 to 2651 1 to 767       769/978
(78 %)
21 diff
(97.9 %id)
BP376004 uterus .b 1895 to 2475 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP269115 thyroid .b 1896 to 2479 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DA652506   .b 1897 to 2471 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA652761   .b 1897 to 2481 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BG759286 B-cells, primary B-cells from tonsils (cell line) .b 1948 to 2752 1 to 811       811/835
(97 %)
22 diff
(97.4 %id)
DB127822 thymus .b 1963 to 2540 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB243603 stomach, tumor tissue .b 1974 to 2538 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BE514108 Burkitt lymphoma, lymph .b 1992 to 2593 1 to 603       603/622
(96 %)
5 diff
(99.2 %id)
DB279255 uterus .b 2165 to 2715 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BX443327 B cells (Ramos cell line) .b 2191 to 3029 1 to 839       839/839
(100 %)
0 diff
(100 %id)
DA631031 Kidney .b 2210 to 2783 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CX785425 human embryonic stem cells .b 2211 to 3009 1 to 799       799/799
(100 %)
2 diff
(99.8 %id)
BF305442 muscle, rhabdomyosarcoma .b 2216 to 2915 1 to 694       694/753
(92 %)
7 diff
(99.1 %id)
BG828092 muscle, rhabdomyosarcoma .b 2216 to 2999 1 to 784       784/784
(100 %)
1 diff
(99.9 %id)
BM549392 astrocytoma grade IV, cell line, brain .b 2216 to 3300 1 to 1086       1085/1120
(96 %)
50 diff
(95.6 %id)
BE300005 muscle, rhabdomyosarcoma .b 2235 to 2989 1 to 749       749/754
(99 %)
7 diff
(99.1 %id)
BE299948 muscle, rhabdomyosarcoma .b 2236 to 3047 1 to 808       808/952
(84 %)
18 diff
(98.2 %id)
BE296434 muscle, rhabdomyosarcoma .b 2236 to 2837 1 to 600       600/600
(100 %)
2 diff
(99.7 %id)
BE276812 melanotic melanoma, skin .b 2259 to 2915 1 to 655       655/660
(99 %)
4 diff
(99.4 %id)
DA303488 hippocampus .b 2291 to 2884 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
BG120498 adenocarcinoma, cell line, Liver .b 2349 to 3154 1 to 805       805/807
(99 %)
26 diff
(96.8 %id)
CN335382 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 2365 to 3076 1 to 712       712/712
(100 %)
6 diff
(99.2 %id)
BP377087 uterus .b 2410 to 2991 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BX342524   .b 2420 to 3207 12 to 796       785/796
(98 %)
11 diff
(98.7 %id)
BF797592 lymph, lymphoma, cell line .b 2422 to 3134 1 to 716       716/761
(94 %)
16 diff
(97.9 %id)
AA325114 brain, cerebellum .b 2428 to 2638 1 to 211       211/211
(100 %)
0 diff
(100 %id)
DA829545 placenta .b 2449 to 3151 2 to 709   capped   708/708
(100 %)
13 diff
(98.2 %id)
DA049309   .b 2459 to 3046 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
CN335385 embryonic stem cells, cell lines H1, H7, andH9 .b 2490 to 3166 36 to 712       677/712
(95 %)
6 diff
(99.2 %id)
BP305476   .b 2498 to 3062 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BP289682 lung .b 2499 to 3080 1 to 582       582/582
(100 %)
0 diff
(100 %id)
EH350578   .b 2530 to 2606 1 to 77       77/77
(100 %)
0 diff
(100 %id)
CB154838 brain .b 2552 to 3039 1 to 488       488/488
(100 %)
0 diff
(100 %id)
BQ669836 epidermoid carcinoma, cell line, salivary gland .b 2562 to 3377 1 to 824       824/943
(87 %)
17 diff
(98.2 %id)
AA305651 aorta .b 2575 to 2792 1 to 218       218/218
(100 %)
0 diff
(100 %id)
AL046787 testis .b 2579 to 3239 1 to 661       661/661
(100 %)
0 diff
(100 %id)
BI907513 leukocyte .b 2583 to 3418 9 to 838       830/838
(99 %)
14 diff
(98.4 %id)
TI_57234075   .b 2583 to 3418 33 to 862       830/862
(96 %)
14 diff
(98.4 %id)
BQ049218 lymph, lymphoma, cell line .b 2630 to 3629 1 to 1009       1009/1009
(100 %)
18 diff
(98.3 %id)
BP381887 adipose tissue .b 2638 to 3263 1 to 625       625/625
(100 %)
3 diff
(99.6 %id)
BP367389 thymus .b 2639 to 3224 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
BP296003   .b 2656 to 3238 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BM788399 stomach .b 2717 to 3362 1 to 646       646/646
(100 %)
0 diff
(100 %id)
BG769758 melanotic melanoma, high MDR (cell line), skin .b 2734 to 3419 1 to 686       686/686
(100 %)
5 diff
(99.3 %id)
BM194338 leukopheresis .b 2735 to 3176 441 to 1       441/441
(100 %)
4 diff
(99.1 %id)
CN335377 embryonic stem cells, DMSO-treated H9 cellline .b 2756 to 3318 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM014940 breast, mammary adenocarcinoma, cell line .b 2762 to 3559 29 to 832       804/832
(96 %)
17 diff
(98.0 %id)
TI_59393033   .b 2762 to 3559 116 to 919       804/832
(96 %)
17 diff
(98.0 %id)
TI_154186013   .b 2773 to 3621 110 to 951       842/971
(86 %)
17 diff
(98.3 %id)
BM479578 embryonal carcinoma, cell line, testis .b 2808 to 3788 1 to 992       990/1051
(94 %)
41 diff
(96.1 %id)
DA924834 small intestine .b 2869 to 3441 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BM016445 breast, mammary adenocarcinoma, cell line .b 2889 to 3877 1 to 992       992/1007
(98 %)
36 diff
(96.5 %id)
TI_59393376   .b 2889 to 3877 90 to 1081       992/1007
(98 %)
36 diff
(96.5 %id)
BM144221 leukopheresis .b 2981 to 3176 197 to 1       197/197
(100 %)
11 diff
(94.5 %id)
BG119339 adenocarcinoma, cell line, Liver .b 2997 to 3615 1 to 615       615/672
(91 %)
5 diff
(99.3 %id)
BQ421624 embryonal carcinoma, cell line, testis .b 2998 to 3856 1 to 861       861/861
(100 %)
6 diff
(99.4 %id)
CR593051 B cells (Ramos cell line) Cot 25-normalized .b 3009 to 4109 1 to 1101       1101/1101
(100 %)
0 diff
(100 %id)
BX401775   .b 3009 to 4098 1 to 1085   fully sequenced,   1085/1085
(100 %)
12 diff
(98.9 %id)
CB135552 Liver .b 3036 to 3431 1 to 396       396/396
(100 %)
0 diff
(100 %id)
BM729329 eye, fetal eye .b 3097 to 3667 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA557419   .b 3101 to 3669 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BQ441732 epithelioid carcinoma, Pancreas .b 3127 to 3973 1 to 851       851/851
(100 %)
8 diff
(99.1 %id)
TI_154124634   .b 3157 to 4148 1071 to 101   AAA   971/981
(98 %)
29 diff
(97.1 %id)
DB255069 uterus .b 3163 to 3739 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CR618032 Placenta Cot 25-normalized .b 3176 to 4147 1 to 972       972/972
(100 %)
0 diff
(100 %id)
AL570425 placenta, Placenta Cot 25-normalized .b 3184 to 4147 1 to 959   fully sequenced,   959/959
(100 %)
19 diff
(98.1 %id)
CN335376 embryonic stem cells, cell lines H1, H7, andH9 .b 3234 to 3552 1 to 319       319/319
(100 %)
0 diff
(100 %id)
AA180892 muscle, skeletal muscle .b 3234 to 3417 1 to 184     Submitted on the opposite strand 184/184
(100 %)
0 diff
(100 %id)
BM803611 leiomyosarcoma, uterus .b 3257 to 4148 937 to 40     Submitted on the opposite strand 898/1047
(85 %)
6 diff
(99.5 %id)
BQ055507 lymph, lymphoma, cell line .b 3257 to 4148 926 to 31   AAA Submitted on the opposite strand 896/957
(93 %)
7 diff
(99.3 %id)
EC507340 Prostate .b 3281 to 3391 111 to 1       111/111
(100 %)
0 diff
(100 %id)
BF175777 blood .b 3298 to 3538 1 to 241       241/241
(100 %)
0 diff
(100 %id)
TI_154049259   .b 3328 to 4147 901 to 85   AAA   817/947
(86 %)
26 diff
(97.3 %id)
TI_154164696   .b 3328 to 4155 917 to 100   AAA Submitted on the opposite strand 818/910
(89 %)
15 diff
(98.4 %id)
TI_153957270   .b 3331 to 3973 79 to 720       642/814
(78 %)
3 diff
(99.7 %id)
TI_227713732   .b 3340 to 4148 865 to 68   AAA   798/973
(82 %)
15 diff
(98.5 %id)
BU155109 melanotic melanoma, skin .b 3395 to 4147 821 to 62   AAA Submitted on the opposite strand 760/863
(88 %)
19 diff
(97.8 %id)
DA731188   .b 3403 to 4201 2 to 800   capped   799/801
(99 %)
7 diff
(99.2 %id)
BU517008 leiomyosarcoma, uterus .b 3406 to 4148 1 to 743   AAA   743/743
(100 %)
0 diff
(100 %id)
DR155923 human embryonic stem cells differentiated toan early endodermal cell type .b 3458 to 4157 709 to 10     Submitted on the opposite strand 700/709
(98 %)
0 diff
(100 %id)
AL544177 placenta, Placenta Cot 25-normalized .b 3459 to 4067 616 to 8   fully sequenced,   609/616
(98 %)
8 diff
(98.8 %id)
BX401774   .b 3459 to 4109 650 to 1   fully sequenced,   650/650
(100 %)
10 diff
(98.5 %id)
BX435929 B cells (Ramos cell line) .b 3487 to 4144 658 to 1       658/658
(100 %)
4 diff
(99.4 %id)
BM707167 eye, eye anterior segment .b 3537 to 4146 1 to 610       610/610
(100 %)
3 diff
(99.6 %id)
BQ773774 Chondrosarcoma Grade II, Left Pelvis .b 3563 to 4148 606 to 19   AAA   588/588
(100 %)
2 diff
(99.7 %id)
DA653795   .b 3566 to 4103 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BU630031 cell lines, Chondrosarcoma .b 3566 to 4148 601 to 19   AAA   583/583
(100 %)
1 diff
(99.9 %id)
TI_154153647   .b 3574 to 4148 687 to 114   AAA Submitted on the opposite strand 574/579
(99 %)
12 diff
(98.0 %id)
BE832079 marrow .b 3575 to 3916 1 to 342       342/342
(100 %)
0 diff
(100 %id)
DB359769 whole embryo, mainly body .b 3604 to 4163 555 to 1       555/555
(100 %)
16 diff
(97.2 %id)
AI123945 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3655 to 4148 494 to 1       494/494
(100 %)
0 diff
(100 %id)
CR996632 T-Lymphocytes .b 3683 to 4404 1 to 724       724/726
(99 %)
4 diff
(99.5 %id)
AI928062 normal prostate, Prostate .b 3685 to 4149 465 to 1       465/465
(100 %)
0 diff
(100 %id)
DB263917 uterus .b 3686 to 4270 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
EC462531 Prostate .b 3695 to 3785 91 to 1       91/91
(100 %)
0 diff
(100 %id)
AI041747 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3700 to 4148 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AW002493 pooled germ cell tumors .b 3710 to 4148 439 to 1       439/439
(100 %)
0 diff
(100 %id)
AW590550 pooled germ cell tumors .b 3710 to 4148 439 to 1       439/439
(100 %)
0 diff
(100 %id)
AW779548 Kidney .b 3713 to 4145 433 to 1       433/433
(100 %)
0 diff
(100 %id)
BM992413 Bone, Subchondral Bone .b 3714 to 4148 453 to 19   AAA   435/435
(100 %)
0 diff
(100 %id)
BU431666 lymph .b 3717 to 4148 473 to 42   AAA Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
CF137314 lymph .b 3729 to 4174 8 to 453       446/453
(98 %)
6 diff
(98.7 %id)
TI_154166766   .b 3729 to 4193 81 to 545       465/466
(99 %)
1 diff
(99.8 %id)
AW503174 lymph .b 3752 to 4148 431 to 35   AAA Submitted on the opposite strand 397/397
(100 %)
0 diff
(100 %id)
CK820046 Islets of Langerhans, Pancreas .b 3765 to 4148 1 to 384   AAA   384/384
(100 %)
0 diff
(100 %id)
AA083323   .b 3803 to 4123 322 to 1       322/322
(100 %)
3 diff
(99.1 %id)
DB374418 placenta .b 3831 to 4148 318 to 1       318/318
(100 %)
2 diff
(99.4 %id)
AI655457 pooled germ cell tumors .b 3842 to 4148 307 to 1       307/307
(100 %)
0 diff
(100 %id)
AA861351   .b 3876 to 4154 290 to 12   AAA   279/279
(100 %)
0 diff
(100 %id)
BM672400 eye, optic nerve .b 3893 to 4148 274 to 19   AAA   256/256
(100 %)
0 diff
(100 %id)
BU428951 lymph .b 3911 to 4148 265 to 28   AAA Submitted on the opposite strand 238/238
(100 %)
0 diff
(100 %id)
AA648532 germinal center B cell .b 3985 to 4148 195 to 32   AAA   164/164
(100 %)
0 diff
(100 %id)
CR609093 B cells (Ramos cell line) Cot 25-normalized .b 4119 to 5672 1 to 1554   tiling clone,   1554/1554
(100 %)
0 diff
(100 %id)
DB363285   .b 5146 to 5699 552 to 3   tiling clone,   550/552
(99 %)
0 diff
(100 %id)
R23620 placenta .c 1 to 367 372 to 1   tiling clone, Submitted on the opposite strand 372/479
(77 %)
5 diff
(99.0 %id)
H13766 placenta .c 8 to 367 364 to 1   tiling clone, Submitted on the opposite strand 364/445
(81 %)
4 diff
(99.2 %id)
CX786578 human embryonic stem cells .c 350 to 1104 1 to 756   tiling clone,   756/756
(100 %)
1 diff
(99.9 %id)
BU787818 insulinoma, Pancreas .c 1088 to 1509 7 to 428   tiling clone,   422/428
(98 %)
0 diff
(100 %id)
BE393487 endometrium, adenocarcinoma cell line, uterus .c 1192 to 1829 37 to 667   tiling clone,   631/688
(91 %)
21 diff
(97.0 %id)
BU787544 insulinoma, Pancreas .c 1553 to 2202 665 to 16   tiling clone, AAA   650/650
(100 %)
0 diff
(100 %id)
DA169593 amygdala .d 1 to 579 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
BF951175 nervous_normal .d 536 to 1150 610 to 1   tiling clone,   610/613
(99 %)
12 diff
(98.1 %id)
BQ339707 nervous_normal .d 570 to 1162 621 to 25   tiling clone,   597/621
(96 %)
10 diff
(98.4 %id)
BF952495 nervous_normal .d 615 to 1142 530 to 1   tiling clone,   530/534
(99 %)
9 diff
(98.4 %id)
BF954919 nervous_normal .d 761 to 1158 403 to 6       398/403
(98 %)
4 diff
(99.1 %id)
BF963779 nervous_normal .d 765 to 1158 401 to 7   tiling clone,   395/401
(98 %)
5 diff
(98.8 %id)
BF954920 nervous_normal .d 801 to 1158 363 to 6       358/363
(98 %)
5 diff
(98.7 %id)
DB280331 uterus .e 1 to 544 2 to 545   tiling clone, capped   544/544
(100 %)
2 diff
(99.7 %id)
AL598416   .e 212 to 877 1 to 666   tiling clone,   666/666
(100 %)
0 diff
(100 %id)
DB281281 uterus .e 237 to 789 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB163124 thymus .e 274 to 758 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
CB044076 colon, juvenile granulosa tumor .e 629 to 1269 35 to 675   tiling clone, to resequence,   641/675
(94 %)
6 diff
(99.2 %id)
CB044075 colon, juvenile granulosa tumor .e 1731 to 2380 666 to 17   tiling clone, to resequence, AAA   650/650
(100 %)
0 diff
(100 %id)
AK074954   .f 1 to 2989 2 to 2989 exact tiling clone, available from FLJ,   2989/2989
(100 %)
2 diff
(100.0 %id)
DA736064   .f 1 to 847 2 to 849   capped   848/848
(100 %)
8 diff
(99.1 %id)
Z43272 brain, total brain .f 1842 to 2141 1 to 301       301/301
(100 %)
2 diff
(99.4 %id)
TI_149285092   .f 1974 to 2986 1094 to 91   AAA   1004/1127
(89 %)
60 diff
(94.7 %id)
AA031942 uterus .f 1981 to 2165 1 to 186       186/186
(100 %)
1 diff
(99.5 %id)
BX103968 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 2023 to 2810 1 to 786       786/786
(100 %)
2 diff
(99.8 %id)
BQ021626 lung, Metastatic Chondrosarcoma .f 2274 to 2984 729 to 19   AAA   711/711
(100 %)
0 diff
(100 %id)
BQ019670 Chondrosarcoma, Left Pubic Bone .f 2327 to 2984 675 to 19   AAA   657/657
(100 %)
2 diff
(99.7 %id)
BG571851 placenta .f 2356 to 2979 1 to 621       621/898
(69 %)
8 diff
(99.2 %id)
BE882538 leiomyosarcoma, uterus .f 2448 to 2983 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DB368492   .f 2497 to 2989 495 to 1       495/495
(100 %)
6 diff
(98.8 %id)
AI346533 adenocarcinoma, colon .f 2501 to 2987 488 to 2       487/488
(99 %)
0 diff
(100 %id)
BM663310 eye, RPE and Choroid .f 2516 to 2984 489 to 21   AAA   469/469
(100 %)
0 diff
(100 %id)
AA031943 uterus .f 2544 to 2962 422 to 1       422/423
(99 %)
3 diff
(99.3 %id)
AI347336 colon, colon tumor, RER+ .f 2566 to 2986 437 to 17   AAA   421/421
(100 %)
0 diff
(100 %id)
AI383336 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 2591 to 2986 396 to 1       396/396
(100 %)
0 diff
(100 %id)
BU680736 lung .f 2621 to 2986 382 to 17   AAA   366/366
(100 %)
0 diff
(100 %id)
AA678884   .f 2645 to 2982 338 to 1       338/338
(100 %)
0 diff
(100 %id)
Z39344 brain, total brain .f 2689 to 2984 296 to 1       296/296
(100 %)
0 diff
(100 %id)
AI382740 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 2744 to 2984 241 to 1       241/241
(100 %)
0 diff
(100 %id)
AK057182 stomach .g 1 to 1787 2 to 1788 exact tiling clone, available from FLJ,   1788/1788
(100 %)
2 diff
(99.9 %id)
DA962676 stomach .g 1 to 481 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DB334456 stomach .g 1493 to 1787 296 to 1       296/296
(100 %)
1 diff
(99.7 %id)
DA709065   .h 1 to 534 2 to 535   tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
BP270400 small intestine .h 433 to 1011 14 to 592   tiling clone,   579/592
(97 %)
8 diff
(98.7 %id)
BC028196 Blood, adult leukocytes .i 1 to 1562 1 to 1562 R99G S128P tiling clone, available from MGC, AAA   1562/1562
(100 %)
5 diff
(99.7 %id)
BI023777 marrow .i 523 to 907 396 to 10       387/396
(97 %)
2 diff
(99.5 %id)
BP367908 thymus .j 1 to 590 1 to 587 E5G Q6I F7P H8P L9* tiling clone,   587/587
(100 %)
6 diff
(99.0 %id)
BP321193 placenta .k 1 to 579 1 to 583 Q128P Q129A A130G F131L R132Q ... tiling clone,   583/583
(100 %)
5 diff
(99.2 %id)
TI_57151617   .l 1 to 778 63 to 840 exact tiling clone,   778/840
(92 %)
7 diff
(99.2 %id)
BC032337 Colon, Kidney, Stomach, adult, whole pooled .l 5 to 996 1 to 992 exact tiling clone, available from MGC, AAA   992/992
(100 %)
1 diff
(99.9 %id)
BI763670 pooled colon, kidney, stomach .l 5 to 778 1 to 774 exact available from MGC,   774/774
(100 %)
1 diff
(99.9 %id)
AW299415 Kidney .m 1 to 206 206 to 1   tiling clone,   206/206
(100 %)
2 diff
(99.1 %id)
CN335383 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .m 123 to 791 10 to 677   tiling clone,   668/679
(98 %)
9 diff
(98.7 %id)
AW204569   .m 242 to 732 1 to 491     Submitted on the opposite strand 491/491
(100 %)
0 diff
(100 %id)
AI540100 B-cell, chronic lymphotic leukemia .m 259 to 726 1 to 468     Submitted on the opposite strand 468/468
(100 %)
0 diff
(100 %id)
AW074520 colon, juvenile granulosa tumor .m 263 to 704 1 to 442     Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
AI005272 pooled .m 266 to 777 1 to 512     Submitted on the opposite strand 512/512
(100 %)
0 diff
(100 %id)
AW268463 pooled .m 266 to 712 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
CN335378 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .m 323 to 728 1 to 406       406/406
(100 %)
0 diff
(100 %id)
AI953513 Kidney .m 500 to 954 457 to 1   tiling clone,   457/457
(100 %)
5 diff
(99.0 %id)
DA644181   .n 1 to 565 2 to 566 N59S E136G tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
BM706656 eye, optic nerve .o 1 to 561 9 to 570   tiling clone, fully sequenced,   562/570
(98 %)
12 diff
(97.9 %id)
BM672822 eye, optic nerve .o 531 to 989 477 to 19   tiling clone, fully sequenced, AAA   459/459
(100 %)
0 diff
(100 %id)
DB456389.
matches multiple genes
testis .p 1 to 499 1 to 499 T101K tiling clone, also hits gene snerstabu 499/499
(100 %)
3 diff
(99.4 %id)
CN335375 embryonic stem cells, cell lines H1, H7, andH9 .p 6 to 330 1 to 325       325/325
(100 %)
1 diff
(99.7 %id)
CN335388 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .p 31 to 163 1 to 133       133/133
(100 %)
0 diff
(100 %id)
DN999295   .p 77 to 730 8 to 660   tiling clone,   653/660
(98 %)
7 diff
(99.0 %id)
DC417672 trachea .p 79 to 642 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC375950 brain .p 131 to 719 1 to 591       591/591
(100 %)
4 diff
(99.4 %id)
CB988396 Human Placenta, placenta .p 134 to 724 27 to 617   tiling clone, AAA   591/617
(95 %)
6 diff
(99.1 %id)
DC380053 placenta .p 147 to 575 1 to 429       429/429
(100 %)
2 diff
(99.6 %id)
TI_151784971   .q 1 to 701 79 to 773 K17Q E41* tiling clone, fully sequenced,   695/695
(100 %)
36 diff
(94.9 %id)
TI_151729272   .q 671 to 1386 781 to 76   tiling clone, fully sequenced, AAA   706/706
(100 %)
9 diff
(98.8 %id)
BF368552 placenta_normal .q 1053 to 1371 8 to 326   tiling clone,   319/326
(97 %)
7 diff
(97.9 %id)
AA384663 thyroid gland .r 1 to 232 1 to 232 D4X tiling clone,   232/237
(97 %)
1 diff
(99.6 %id)
AW958942   .r 2 to 610 1 to 608   tiling clone,   608/609
(99 %)
6 diff
(99.1 %id)
DA243754 brain .s 1 to 587 2 to 588 exact tiling clone, capped   587/587
(100 %)
2 diff
(99.7 %id)
DA567970   .s 529 to 1079 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB318904   .s 1796 to 2327 532 to 1   tiling clone,   532/532
(100 %)
0 diff
(100 %id)
CB992868 placenta, pre-eclamptic placenta .t-u 1 to 689 28 to 725   tiling clone,   698/877
(79 %)
15 diff
(98.3 %id)
BX487508   .t-u 682 to 1217 1 to 539   tiling clone,   539/539
(100 %)
7 diff
(98.8 %id)
DA627888 Kidney .u 1 to 525 2 to 526   tiling clone, capped   525/525
(100 %)
0 diff
(100 %id)
AA864625 germinal center B cell .va-u 1 to 430 430 to 1 exact tiling clone,   430/430
(100 %)
2 diff
(99.6 %id)
AA766295 germinal center B cell .va-u 7 to 383 426 to 48   AAA   379/393
(96 %)
0 diff
(100 %id)
AI361721 B-cell, chronic lymphotic leukemia .vb-u 1 to 378 378 to 1 exact tiling clone,   378/378
(100 %)
2 diff
(99.5 %id)
BX114281 Prostate Gene TBC1D1, variant not shown       AAA      
BX097065 placenta Gene TBC1D1, variant not shown         Submitted on the opposite strand    
AI401659 Prostate Gene TBC1D1, variant not shown              
DB135654 thymus Gene TBC1D1, variant not shown       capped      
DB344973 thymus Gene TBC1D1, variant not shown              
DB153653 thymus Gene TBC1D1, variant not shown       capped      
DB213175 trachea Gene TBC1D1, variant not shown       capped      
404 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va-u, .vb-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI