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Gene TAX1BP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
587 supporting clones for gene TAX1BP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_006024.5   .a 1 to 3466 1 to 3466 exact RefSeq,   3466/3466
(100 %)
0 diff
(100 %id)
AK314292 testis .a 7 to 2528 1 to 2522 exact tiling clone,   2522/2522
(100 %)
0 diff
(100 %id)
AK000098 colon .a 64 to 2563 1 to 2500 A581T available from FLJ, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2500/2500
(100 %)
2 diff
(100.0 %id)
AL136586 amygdala .a 71 to 2959 1 to 2890 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2890/2890
(100 %)
1 diff
(100.0 %id)
BC001764 Eye, retinoblastoma .a 73 to 2584 1 to 2513 L307I AAA   2513/4812
(52 %)
6 diff
(99.9 %id)
BC050358 Skin, melanotic melanoma. .a 92 to 2563 1 to 2472 L307I available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2472/2472
(100 %)
1 diff
(100.0 %id)
CR533556   .a 159 to 2528 1 to 2370 exact     2370/2370
(100 %)
0 diff
(100 %id)
AU127918   .a 326 to 1004 2 to 681   capped   680/680
(100 %)
5 diff
(99.3 %id)
AU138980 placenta .a 650 to 1415 2 to 783   capped   782/799
(97 %)
20 diff
(97.5 %id)
TI_45215688   .a 1239 to 1981 82 to 825       744/825
(90 %)
12 diff
(98.6 %id)
BI602371 brain, hypothalamus .a 1240 to 1981 1 to 743       743/743
(100 %)
9 diff
(98.8 %id)
BQ437434 melanotic melanoma, skin .a 1242 to 2068 1 to 832       832/903
(92 %)
13 diff
(98.6 %id)
BP205070 coronary artery .a 1398 to 1980 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_1948213766   .a 1429 to 2541 1216 to 112       1105/1231
(89 %)
39 diff
(96.9 %id)
BI050699 placenta_normal .a 1446 to 2006 1 to 564       564/564
(100 %)
9 diff
(98.5 %id)
TI_1948214613   .a 1447 to 2541 1191 to 114       1080/1367
(79 %)
40 diff
(97.1 %id)
BX480473   .a 1479 to 2010 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
CR622233 Placenta Cot 25-normalized .a 1490 to 2729 1 to 1240   tiling clone,   1240/1240
(100 %)
0 diff
(100 %id)
BX364953 Placenta Cot 25-normalized .a 1490 to 2537 1 to 1039   AAA   1039/1058
(98 %)
14 diff
(98.7 %id)
BX397364 Placenta Cot 25-normalized .a 1490 to 2472 1 to 966       966/977
(98 %)
17 diff
(98.3 %id)
DA469206   .a 1516 to 2087 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA152388 amygdala .a 1519 to 2106 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
BG207814   .a 1563 to 2335 1 to 770       770/1180
(65 %)
21 diff
(98.3 %id)
TI_1948214329   .a 1564 to 2541 1092 to 109       984/1244
(79 %)
40 diff
(96.8 %id)
BU167084 melanotic melanoma, skin .a 1566 to 2433 1 to 870       870/871
(99 %)
5 diff
(99.5 %id)
BG117850 adenocarcinoma, cell line, Liver .a 1576 to 2371 1 to 786       786/934
(84 %)
21 diff
(97.8 %id)
TI_1948214330   .a 1576 to 2541 1076 to 114       963/1327
(72 %)
10 diff
(99.3 %id)
CB138720 Liver .a 1577 to 2060 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BQ227560 melanotic melanoma, skin .a 1601 to 2426 12 to 850       839/928
(90 %)
26 diff
(97.2 %id)
BM788665 stomach .a 1633 to 2204 1 to 572       572/572
(100 %)
0 diff
(100 %id)
TI_1948214612   .a 1682 to 2541 967 to 107       861/1277
(67 %)
18 diff
(98.6 %id)
TI_149314864   .a 1686 to 2563 954 to 85   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 870/1015
(85 %)
15 diff
(98.6 %id)
TI_149307940   .a 1690 to 2587 952 to 59       894/1031
(86 %)
15 diff
(98.6 %id)
TI_1948214041   .a 1691 to 2541 962 to 109       854/1274
(67 %)
22 diff
(98.3 %id)
BX364952 Placenta Cot 25-normalized .a 1697 to 2723 1031 to 5       1027/1034
(99 %)
35 diff
(96.7 %id)
BX397363 Placenta Cot 25-normalized .a 1698 to 2715 1017 to 1       1017/1017
(100 %)
45 diff
(95.6 %id)
AA130975 colon, tumor .a 1733 to 2091 1 to 361   fully sequenced,   361/361
(100 %)
3 diff
(99.2 %id)
BM839717 stomach .a 1747 to 2300 1 to 553       553/553
(100 %)
3 diff
(99.5 %id)
BM833315 stomach .a 1747 to 2118 1 to 370       370/373
(99 %)
6 diff
(98.4 %id)
TI_1948214042   .a 1788 to 2541 884 to 119       766/1385
(55 %)
15 diff
(99.0 %id)
TI_159705930   .a 1789 to 2572 784 to 1       784/1000
(78 %)
4 diff
(99.6 %id)
TI_1948213767   .a 1794 to 2448 859 to 204       656/1420
(46 %)
29 diff
(98.0 %id)
CV573714 cornea, eye .a 1866 to 2482 1 to 617       617/617
(100 %)
0 diff
(100 %id)
CB306348 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1902 to 2563 680 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 662/662
(100 %)
2 diff
(99.7 %id)
AA301281 testis .a 1906 to 2068 1 to 164       164/164
(100 %)
2 diff
(98.8 %id)
BU686840 lung, Primary Lung Epithelial Cells .a 1929 to 2563 654 to 20   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 635/636
(99 %)
0 diff
(100 %id)
TI_149273958   .a 1944 to 2728 901 to 137   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 769/828
(92 %)
61 diff
(92.7 %id)
AU155685 placenta .a 2019 to 2563 545 to 1       545/545
(100 %)
10 diff
(98.2 %id)
EL952860 eyeball .a 2022 to 2563 1 to 541   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 541/541
(100 %)
5 diff
(99.1 %id)
AU157841 placenta .a 2045 to 2563 517 to 1       517/517
(100 %)
10 diff
(98.1 %id)
AU150305   .a 2046 to 2563 517 to 1       517/526
(98 %)
9 diff
(98.3 %id)
CD556812 brain, Pituitary .a 2054 to 2563 1 to 510   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 510/510
(100 %)
5 diff
(99.1 %id)
AW513002 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2055 to 2563 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AW304292 lung, two pooled squamous cell carcinomas .a 2056 to 2563 535 to 28   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 508/508
(100 %)
0 diff
(100 %id)
AW068925 bone marrow stroma .a 2061 to 2563 521 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 503/503
(100 %)
0 diff
(100 %id)
AA130980 colon, tumor .a 2064 to 2564 503 to 1   fully sequenced,   503/503
(100 %)
4 diff
(99.3 %id)
BE786612 large cell carcinoma, lung .a 2068 to 2559 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
AW471151 colon, moderately-differentiated adenocarcinoma .a 2073 to 2565 493 to 1       493/493
(100 %)
0 diff
(100 %id)
TI_149274364   .a 2075 to 2587 573 to 60       514/1122
(45 %)
6 diff
(99.5 %id)
BM968522 lung, Primary Lung Epithelial Cells .a 2075 to 2563 508 to 20   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 489/498
(98 %)
0 diff
(100 %id)
DC321567 brain .b 1 to 562 1 to 563   tiling clone,   563/563
(100 %)
4 diff
(99.3 %id)
AK299729 brain .b 43 to 2735 1 to 2695 R223G tiling clone,   2695/2695
(100 %)
3 diff
(99.9 %id)
DC376404 brain .b 43 to 541 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DC299163   .b 70 to 641 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
AF268075   .b 228 to 2471 1 to 2244 exact     2244/2244
(100 %)
1 diff
(100.0 %id)
CR457056   .b 228 to 2470 1 to 2243   tiling clone,   2243/2244
(99 %)
2 diff
(100.0 %id)
EL734571 mixed .b 228 to 847 1 to 620       620/620
(100 %)
0 diff
(100 %id)
TI_1948213765   .b 228 to 1273 130 to 1176       1047/1254
(83 %)
41 diff
(96.8 %id)
TI_1948214039   .b 228 to 658 129 to 560       432/1326
(32 %)
13 diff
(99.1 %id)
TI_1948214040   .b 228 to 1086 128 to 996       869/1338
(64 %)
35 diff
(97.4 %id)
TI_1948214327   .b 228 to 1164 124 to 1065   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 942/1274
(73 %)
32 diff
(97.5 %id)
TI_1948214328   .b 228 to 990 127 to 888       762/1301
(58 %)
13 diff
(99.1 %id)
TI_1948214610   .b 228 to 1086 124 to 984   AAA   861/1251
(68 %)
28 diff
(97.8 %id)
TI_1948214611   .b 228 to 980 124 to 881       758/1374
(55 %)
15 diff
(99.0 %id)
BQ649306 hepatocellular carcinoma, cell line, Liver .b 229 to 1156 1 to 930       930/941
(98 %)
16 diff
(98.3 %id)
AA088185 uterus .b 230 to 702 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AL520248 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 284 to 1207 1 to 924       924/924
(100 %)
0 diff
(100 %id)
EH342932   .b 286 to 371 1 to 86       86/86
(100 %)
0 diff
(100 %id)
CU452056 epidermis .b 295 to 1057 781 to 19     Submitted on the opposite strand 763/781
(97 %)
3 diff
(99.7 %id)
CN404384 embryonic stem cells, DMSO-treated H9 cellline .b 299 to 955 1 to 657       657/657
(100 %)
0 diff
(100 %id)
DA167578 amygdala .b 335 to 902 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AI459825 colon .b 345 to 683 339 to 1       339/339
(100 %)
0 diff
(100 %id)
FN099562 breast carcinoma .b 346 to 445 1 to 103       103/104
(99 %)
5 diff
(95.2 %id)
BG168046 hypernephroma, cell line, Kidney .b 403 to 1062 1 to 662       662/898
(73 %)
5 diff
(99.5 %id)
BI255057 cervical carcinoma cell line, cervix .b 442 to 1397 1 to 949       949/977
(97 %)
34 diff
(96.6 %id)
CX867714 embryonic stem .b 478 to 1306 1 to 829     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 829/829
(100 %)
0 diff
(100 %id)
AA777997 heart .b 479 to 866 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AU137856 placenta .b 486 to 1270 2 to 789   capped   788/881
(89 %)
6 diff
(99.4 %id)
FN087748 breast carcinoma .b 534 to 629 96 to 1     Submitted on the opposite strand 96/97
(98 %)
0 diff
(100 %id)
AW854758 colon .b 535 to 639 1 to 105       105/105
(100 %)
5 diff
(95.3 %id)
BP292386 lung .b 535 to 1116 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AU136288 placenta .b 538 to 1352 2 to 817   capped   816/926
(88 %)
7 diff
(99.3 %id)
DA366174 subthalamic nucleus .b 541 to 1114 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AA157932 Pancreas .b 567 to 962 1 to 396       396/396
(100 %)
0 diff
(100 %id)
DA310017 hippocampus .b 577 to 1158 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
FN112023 breast carcinoma .b 582 to 680 1 to 99       99/99
(100 %)
0 diff
(100 %id)
DA176922 amygdala .b 606 to 1148 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CD107268 brain, Pituitary .b 660 to 1484 1 to 833       833/886
(94 %)
13 diff
(98.6 %id)
BU949703 Pancreas, Purified pancreatic islet .b 675 to 1180 506 to 1       506/506
(100 %)
0 diff
(100 %id)
BM904841 melanotic melanoma, skin .b 692 to 1491 49 to 852       804/1086
(74 %)
34 diff
(96.9 %id)
DA066918 cerebellum .b 700 to 1275 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BE895609 melanotic melanoma, skin .b 700 to 1460 1 to 760       760/1190
(63 %)
26 diff
(97.9 %id)
DA114770 cerebellum .b 722 to 1314 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
CD300403 testis .b 756 to 1562 30 to 838       809/850
(95 %)
16 diff
(98.2 %id)
AL041212 testis .b 759 to 1221 1 to 463       463/463
(100 %)
0 diff
(100 %id)
CD243125 brain, Pituitary .b 771 to 1557 1 to 794       794/884
(89 %)
13 diff
(98.6 %id)
BQ892651 epidermoid carcinoma, cell line, salivary gland .b 772 to 1731 1 to 970       967/974
(99 %)
28 diff
(97.2 %id)
AU143287   .b 772 to 1582 2 to 807   capped   806/846
(95 %)
9 diff
(99.0 %id)
AI247564 liver and spleen .b 780 to 1161 382 to 1       382/382
(100 %)
0 diff
(100 %id)
DB018693 esophageal, tumor tissue .b 805 to 1360 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CB153461 brain .b 807 to 1423 1 to 617       617/617
(100 %)
0 diff
(100 %id)
CB133913 Liver .b 811 to 1414 1 to 604       604/604
(100 %)
0 diff
(100 %id)
AU120330 whole embryo, mainly body .b 812 to 1608 2 to 794   capped   793/841
(94 %)
6 diff
(99.3 %id)
DA985068 synovial membrane tissue from rheumatioidarthritis .b 827 to 1382 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BG181191   .b 836 to 1638 1 to 800       800/806
(99 %)
20 diff
(97.6 %id)
EC582808 Prostate .b 838 to 944 1 to 104       104/104
(100 %)
4 diff
(96.2 %id)
FN131002 breast carcinoma .b 850 to 954 107 to 1     Submitted on the opposite strand 107/109
(98 %)
6 diff
(94.5 %id)
BG681402 skin, squamous cell carcinoma .b 850 to 1758 1 to 923       923/1013
(91 %)
31 diff
(97.0 %id)
CR974617 T-Lymphocytes .b 858 to 1742 1 to 885       885/885
(100 %)
4 diff
(99.6 %id)
EB387007 eye, optic nerve .b 872 to 1552 1 to 681       681/681
(100 %)
0 diff
(100 %id)
CR997462 T-Lymphocytes .b 882 to 1722 1 to 841       841/841
(100 %)
0 diff
(100 %id)
BM452146 melanotic melanoma, skin .b 899 to 1956 25 to 1094       1070/1104
(96 %)
27 diff
(97.6 %id)
BP371804 umbilical cord .b 899 to 1479 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP258328 heart .b 932 to 1510 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB057826 testis .b 937 to 1464 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
BM755456 stomach .b 952 to 1273 1 to 322       322/322
(100 %)
0 diff
(100 %id)
DA118450 cerebellum .b 984 to 1523 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
CB154047 brain .b 993 to 1583 1 to 591       591/591
(100 %)
0 diff
(100 %id)
DB102504 thymus .b 993 to 1541 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BG180181 adenocarcinoma, cell line, Prostate .b 1013 to 1758 1 to 747       747/842
(88 %)
21 diff
(97.6 %id)
CB133055 Liver .b 1027 to 1422 1 to 396       396/396
(100 %)
0 diff
(100 %id)
AA099673 colon, tumor .b 1097 to 1499 1 to 403       403/403
(100 %)
0 diff
(100 %id)
BE727393 melanotic melanoma, skin .b 1105 to 1863 1 to 752       752/1026
(73 %)
15 diff
(98.6 %id)
AV714164   .b 1126 to 1866 1 to 741       741/751
(98 %)
9 diff
(98.9 %id)
AV702131 adrenal gland .b 1139 to 1579 1 to 441       441/441
(100 %)
0 diff
(100 %id)
AV711263 adrenal cortico adenoma for Cushing'ssyndrome .b 1216 to 1907 1 to 692       692/692
(100 %)
7 diff
(99.0 %id)
BX362530   .b 1223 to 2148 43 to 968       926/968
(95 %)
7 diff
(99.3 %id)
CD250472 Blood vessels - aorta, basilar and artery .b 1259 to 1999 1 to 742       742/749
(99 %)
17 diff
(97.8 %id)
AU136925 placenta .b 1267 to 2131 2 to 872   capped   869/871
(99 %)
23 diff
(97.4 %id)
BP208089 cerebellum .b 1271 to 1855 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BG677367 skin, squamous cell carcinoma .b 1313 to 2047 1 to 735       735/735
(100 %)
0 diff
(100 %id)
BG545389 lung .b 1330 to 1934 1 to 605       605/605
(100 %)
0 diff
(100 %id)
BP264267 small intestine .b 1419 to 1999 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BQ719384 sympathetic trunk .b 1426 to 2190 1 to 775       775/935
(82 %)
28 diff
(97.1 %id)
CR982904 T-Lymphocytes .b 1428 to 2267 1 to 840       840/845
(99 %)
2 diff
(99.8 %id)
DA023309   .b 1436 to 1997 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BM464161 melanotic melanoma, skin .b 1440 to 2523 1 to 1086       1086/1088
(99 %)
28 diff
(97.5 %id)
FN143796 breast carcinoma .b 1445 to 1525 1 to 84       84/84
(100 %)
6 diff
(92.9 %id)
FN143529 breast carcinoma .b 1446 to 1527 1 to 85       85/85
(100 %)
7 diff
(91.8 %id)
FN053672 breast carcinoma .b 1489 to 1550 62 to 1     Submitted on the opposite strand 62/75
(82 %)
0 diff
(100 %id)
FN156219 breast carcinoma .b 1489 to 1587 1 to 96       96/100
(96 %)
5 diff
(95.0 %id)
CD106809 brain, Pituitary .b 1509 to 2376 1 to 873       873/875
(99 %)
13 diff
(98.6 %id)
DR762753 embryonic stem .b 1526 to 2281 1 to 756       756/756
(100 %)
0 diff
(100 %id)
EY198530 intestinal (Lauren) gastric adenocarcinoma, stomach .b 1570 to 1975 405 to 1     Submitted on the opposite strand 405/405
(100 %)
3 diff
(99.3 %id)
BM476850 leiomyosarcoma, uterus .b 1580 to 2506 1 to 927   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 927/927
(100 %)
25 diff
(97.4 %id)
DC321305 brain .b 1584 to 2138 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
TI_57168273   .b 1584 to 2328 72 to 824       748/825
(90 %)
18 diff
(97.9 %id)
CR982932 T-Lymphocytes .b 1585 to 2501 1 to 919       919/925
(99 %)
7 diff
(99.3 %id)
BU070681 insulinoma, Pancreas .b 1587 to 2273 14 to 700     Submitted on the opposite strand 687/687
(100 %)
0 diff
(100 %id)
BJ992438 hepatoblastoma .b 1588 to 1991 1 to 404       404/404
(100 %)
0 diff
(100 %id)
BY795750 eye .b 1594 to 2178 1 to 585       585/585
(100 %)
0 diff
(100 %id)
CN404372 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1602 to 1904 1 to 303       303/303
(100 %)
0 diff
(100 %id)
BG199085   .b 1635 to 2439 1 to 805       805/805
(100 %)
18 diff
(97.8 %id)
BM551908 melanotic melanoma, skin .b 1641 to 2537 1 to 912       912/1055
(86 %)
29 diff
(97.3 %id)
BP319933 pericardium .b 1647 to 2229 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CA775414 Pancreas, Purified pancreatic islet .b 1663 to 2022 19 to 375   fully sequenced,   360/378
(95 %)
6 diff
(98.5 %id)
TI_59395555   .b 1678 to 2269 62 to 656       595/674
(88 %)
15 diff
(97.8 %id)
BM788724 stomach .b 1690 to 2330 1 to 641       641/641
(100 %)
0 diff
(100 %id)
FN058929 breast carcinoma .b 1725 to 1821 97 to 1     Submitted on the opposite strand 97/97
(100 %)
0 diff
(100 %id)
TI_57178920   .b 1734 to 2438 25 to 739       715/740
(96 %)
19 diff
(97.5 %id)
CX867640 embryonic stem .b 1758 to 2506 774 to 26   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 749/749
(100 %)
1 diff
(99.9 %id)
BM312513 Pancreas, Purified pancreatic islet .b 1763 to 2299 1 to 535       535/535
(100 %)
3 diff
(99.5 %id)
FN095403 breast carcinoma .b 1764 to 1828 64 to 1     Submitted on the opposite strand 64/64
(100 %)
1 diff
(98.5 %id)
CK822085 Pancreas, Purified pancreatic islet .b 1787 to 2364 1 to 578     Submitted on the opposite strand 578/578
(100 %)
0 diff
(100 %id)
EL949710 eyeball .b 1791 to 2317 32 to 558       527/558
(94 %)
6 diff
(99.0 %id)
DC373876 tongue .b 1832 to 2409 1 to 578       578/578
(100 %)
0 diff
(100 %id)
FN170930 breast carcinoma .b 1835 to 1935 1 to 102       100/102
(98 %)
4 diff
(96.1 %id)
TI_149307659   .b 1858 to 2529 739 to 68       672/1057
(63 %)
3 diff
(99.8 %id)
BM979322 lung, Primary Lung Epithelial Cells .b 1858 to 2506 667 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 649/668
(97 %)
3 diff
(99.6 %id)
FN099077 breast carcinoma .b 1901 to 1971 1 to 71       71/72
(98 %)
1 diff
(98.7 %id)
TI_149305531   .b 1925 to 2506 674 to 93   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 582/972
(59 %)
0 diff
(100 %id)
CK822086 Pancreas, Purified pancreatic islet .b 1926 to 2512 587 to 1     Submitted on the opposite strand 587/587
(100 %)
0 diff
(100 %id)
BE301686 cervical carcinoma cell line, cervix .b 1932 to 2508 577 to 1       577/577
(100 %)
0 diff
(100 %id)
TI_149272989   .b 1937 to 2530 666 to 72       595/945
(62 %)
6 diff
(99.4 %id)
BX362529   .b 1950 to 2885 962 to 1   tiling clone,   902/962
(93 %)
47 diff
(95.2 %id)
CA775172 Pancreas, Purified pancreatic islet .b 1961 to 2506 546 to 1   fully sequenced,   546/546
(100 %)
2 diff
(99.7 %id)
FN050764 breast carcinoma .b 1982 to 2087 1 to 106       106/106
(100 %)
0 diff
(100 %id)
AI016700 Kidney .b 1989 to 2517 529 to 1       529/529
(100 %)
0 diff
(100 %id)
AA358962 lung .b 1993 to 2197 1 to 205       205/205
(100 %)
0 diff
(100 %id)
AI673719 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1995 to 2507 513 to 1       513/513
(100 %)
0 diff
(100 %id)
TI_57217777   .b 2002 to 2703 27 to 733       707/758
(93 %)
32 diff
(95.8 %id)
BF726089 eye, Iris .b 2026 to 2388 1 to 363       363/363
(100 %)
0 diff
(100 %id)
FN050235 breast carcinoma .b 2076 to 2162 1 to 87       87/88
(98 %)
1 diff
(98.9 %id)
AA009665 liver and spleen .b 2169 to 2315 1 to 147       147/158
(93 %)
1 diff
(99.4 %id)
FN160408 breast carcinoma .b 2293 to 2388 94 to 1     Submitted on the opposite strand 94/96
(97 %)
2 diff
(98.0 %id)
BG718884 testis .c 1 to 673 1 to 674       674/675
(99 %)
10 diff
(98.6 %id)
DC424592 placenta .c 8 to 717 1 to 714   tiling clone,   712/715
(99 %)
9 diff
(98.8 %id)
DC345803 tongue, tumor tissue .c 9 to 553 1 to 545       545/546
(99 %)
4 diff
(99.3 %id)
DC357536   .c 24 to 581 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC310880 cerebellum .c 25 to 477 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
TI_44169227   .c 27 to 661 81 to 715       635/733
(86 %)
7 diff
(99.1 %id)
BI547865 brain, hippocampus .c 28 to 661 1 to 634       634/652
(97 %)
4 diff
(99.4 %id)
DC374946 brain .c 28 to 601 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC400225 testis .c 28 to 579 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC328567 corpus callosum .c 29 to 581 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC353998 brain .c 29 to 558 1 to 530       530/530
(100 %)
0 diff
(100 %id)
NM_001079864.1   .c 29 to 3368 1 to 3340 exact RefSeq,   3340/3340
(100 %)
0 diff
(100 %id)
DC351053 brain .c 33 to 558 1 to 526       526/526
(100 %)
3 diff
(99.5 %id)
DC364002   .c 33 to 585 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
DC411613 kidney, tumor tissue .c 33 to 611 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC326278 caudate nucleus .c 35 to 591 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC334410 hippocampus .c 35 to 696 1 to 665       665/665
(100 %)
3 diff
(99.6 %id)
DC337332 substantia nigra .c 35 to 618 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC346390 tongue, tumor tissue .c 35 to 597 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
DC351622 brain .c 35 to 587 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC352978 brain .c 35 to 597 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC366530   .c 35 to 589 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC371594   .c 35 to 591 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
DC389088 Spleen .c 35 to 608 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
DC401344 testis .c 35 to 593 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC368172   .c 36 to 558 1 to 523       523/523
(100 %)
6 diff
(98.9 %id)
DC314305 amygdala .c 37 to 606 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC328592 corpus callosum .c 37 to 598 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC352888 brain .c 37 to 585 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DC353968 brain .c 37 to 639 1 to 604       604/607
(99 %)
3 diff
(99.6 %id)
DC361887 Kidney .c 37 to 561 1 to 525       525/525
(100 %)
1 diff
(99.9 %id)
DC425441   .c 37 to 591 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC394130 esophageal, tumor tissue .c 37 to 607 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC414335 trachea .c 37 to 591 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC310954 cerebellum .c 41 to 620 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC350646 brain .c 41 to 626 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC375079 brain .c 41 to 606 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC309231 cerebellum .c 42 to 600 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC309553 cerebellum .c 42 to 616 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC352590 brain .c 42 to 586 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DC363310   .c 42 to 576 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
DC304851 cerebellum .c 44 to 607 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC330135 hippocampus .c 44 to 613 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
DC336818 substantia nigra .c 44 to 558 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
DC354270 heart .c 44 to 599 1 to 556       556/556
(100 %)
3 diff
(99.5 %id)
DC360246   .c 44 to 546 1 to 504       504/506
(99 %)
5 diff
(99.1 %id)
DC365650   .c 44 to 595 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
DC424544 placenta .c 44 to 660 1 to 618       618/618
(100 %)
5 diff
(99.2 %id)
DC317353 amygdala .c 47 to 574 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC318932 brain .c 47 to 352 1 to 307       307/307
(100 %)
1 diff
(99.7 %id)
DC343984 thalamus .c 47 to 605 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BP274986 Kidney .c 47 to 630 1 to 584       584/584
(100 %)
0 diff
(100 %id)
CB130288 Liver .c 47 to 416 1 to 370       370/370
(100 %)
0 diff
(100 %id)
DC414317 trachea .c 47 to 618 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DR761571 embryonic stem .c 48 to 889 1 to 842       842/842
(100 %)
1 diff
(99.9 %id)
BM546394 ovary (pool of 3) .c 50 to 1003 21 to 979       959/1054
(90 %)
17 diff
(98.4 %id)
DC371112   .c 50 to 626 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
DC373678 tongue .c 50 to 626 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
DC366305   .c 53 to 639 1 to 587       587/588
(99 %)
3 diff
(99.5 %id)
DC424232   .c 55 to 769 1 to 714       714/714
(100 %)
18 diff
(97.5 %id)
DC331561 hippocampus .c 56 to 641 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC343897 thalamus .c 56 to 614 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC413925 trachea .c 56 to 591 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DC298569 adrenal gland .c 57 to 606 1 to 551       551/551
(100 %)
5 diff
(99.1 %id)
DC328745 corpus callosum .c 57 to 608 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
AW162087 brain, frontal lobe .c 58 to 459 1 to 402       402/402
(100 %)
0 diff
(100 %id)
BM464741 lymph, lymphoma, cell line .c 59 to 805 1 to 753       753/1018
(73 %)
12 diff
(98.9 %id)
BC024600 Lymph, lymphoma .c 61 to 2861 1 to 2800 F678L D679I S680P S681A F682L ... tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2800/2800
(100 %)
1 diff
(100.0 %id)
DC424633 placenta .c 61 to 789 1 to 730       730/730
(100 %)
1 diff
(99.9 %id)
DC346361 tongue, tumor tissue .c 62 to 651 1 to 591       591/591
(100 %)
3 diff
(99.5 %id)
DC362251 Kidney .c 62 to 659 1 to 599       599/599
(100 %)
5 diff
(99.2 %id)
DC371076   .c 62 to 631 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC388400 small intestine .c 62 to 639 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC425492   .c 62 to 593 1 to 532       532/532
(100 %)
0 diff
(100 %id)
DC399288 testis .c 62 to 639 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC355315   .c 64 to 633 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC371037   .c 64 to 636 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC414306 trachea .c 64 to 657 1 to 595       595/595
(100 %)
4 diff
(99.4 %id)
DC297654   .c 66 to 629 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC315501 amygdala .c 66 to 521 1 to 457       457/457
(100 %)
2 diff
(99.6 %id)
DC320131 brain .c 66 to 619 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC370608   .c 66 to 577 1 to 512       512/512
(100 %)
0 diff
(100 %id)
DC379577 pericardium .c 66 to 639 1 to 575       575/578
(99 %)
3 diff
(99.5 %id)
DC406655 thymus .c 66 to 617 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC414551 trachea .c 66 to 648 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC428872   .c 68 to 667 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DC421720 uterus .c 68 to 623 1 to 556       556/556
(100 %)
0 diff
(100 %id)
CN404382 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 69 to 791 1 to 723       723/723
(100 %)
0 diff
(100 %id)
DC301657   .c 70 to 646 1 to 577       577/578
(99 %)
4 diff
(99.4 %id)
CN404376 embryonic stem cells, DMSO-treated H9 cellline .c 70 to 705 1 to 636       636/636
(100 %)
0 diff
(100 %id)
BX460024 brain, fetal brain .c 70 to 1114 1 to 1043       1043/1046
(99 %)
14 diff
(98.7 %id)
DC313457 amygdala .c 72 to 657 1 to 586       586/587
(99 %)
2 diff
(99.7 %id)
DC354032 brain .c 72 to 677 1 to 606       606/606
(100 %)
3 diff
(99.6 %id)
DC359665   .c 72 to 631 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC361572 Kidney .c 72 to 615 1 to 545       545/545
(100 %)
6 diff
(98.9 %id)
DC373802 tongue .c 72 to 645 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC381563 placenta .c 72 to 634 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC389729 Spleen .c 72 to 674 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
DC419120 stomach, tumor tissue .c 72 to 630 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC300873 bladder .c 73 to 558 1 to 486       486/486
(100 %)
3 diff
(99.4 %id)
DC370638   .c 73 to 616 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DC405046 thymus .c 73 to 621 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
DC351259 brain .c 74 to 591 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
DC363552   .c 74 to 605 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
DC374665 brain .c 74 to 627 1 to 555       555/555
(100 %)
3 diff
(99.5 %id)
DC375383 brain .c 74 to 650 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC375742 brain .c 74 to 591 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
DC376072 brain .c 74 to 623 1 to 550       550/550
(100 %)
2 diff
(99.7 %id)
DC378636   .c 74 to 629 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC378757   .c 74 to 647 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
DC298869 adrenal gland .c 75 to 629 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
DC313249 amygdala .c 75 to 630 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC331745 hippocampus .c 75 to 637 1 to 563       563/564
(99 %)
2 diff
(99.7 %id)
DC347018 tongue, tumor tissue .c 75 to 650 1 to 576       576/577
(99 %)
3 diff
(99.5 %id)
DC348923   .c 75 to 649 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC360147   .c 75 to 585 1 to 511       511/511
(100 %)
0 diff
(100 %id)
DC373685 tongue .c 75 to 649 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
DC398823 testis .c 75 to 631 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC404701 thymus .c 75 to 632 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC411348 kidney, tumor tissue .c 75 to 639 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC302114   .c 76 to 664 9 to 598       590/598
(98 %)
8 diff
(98.7 %id)
DC319781 brain .c 76 to 652 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC344364 thalamus .c 76 to 641 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
CD250825 Blood vessels - aorta, basilar and artery .c 76 to 804 1 to 744       744/745
(99 %)
24 diff
(96.8 %id)
CD693218 normal nasopharynx .c 79 to 177 23 to 122       100/122
(81 %)
6 diff
(95.1 %id)
DB442980 testis .c 79 to 503 1 to 425       425/425
(100 %)
0 diff
(100 %id)
BG564922 Liver .c 79 to 899 1 to 825       825/826
(99 %)
41 diff
(95.1 %id)
DC387264   .c 79 to 648 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC414849 trachea .c 79 to 622 8 to 551       544/544
(100 %)
0 diff
(100 %id)
DC361864 Kidney .c 81 to 627 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
DC295715 synovial membrane tissue from rheumatioidarthritis .c 81 to 642 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC425286   .c 82 to 644 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
DC329219 corpus callosum .c 83 to 639 1 to 557       557/558
(99 %)
2 diff
(99.7 %id)
DC344832 colon .c 83 to 627 1 to 545       545/545
(100 %)
0 diff
(100 %id)
CD109439 Human Placenta, placenta .c 83 to 827 18 to 774       757/774
(97 %)
21 diff
(97.3 %id)
DC428733   .c 83 to 670 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC365725   .c 83 to 627 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC383503 Prostate .c 83 to 652 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC385448 rectum .c 83 to 646 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC387945 small intestine .c 83 to 656 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC393138 breast, tumor tissue .c 83 to 607 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
DC406948 thymus .c 83 to 639 1 to 557       557/558
(99 %)
0 diff
(100 %id)
DC412899 liver, tumor tissue .c 83 to 650 1 to 568       568/569
(99 %)
1 diff
(99.9 %id)
DC413343 liver, tumor tissue .c 83 to 639 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC414888 trachea .c 83 to 610 1 to 529       529/529
(100 %)
2 diff
(99.7 %id)
DC419139 stomach, tumor tissue .c 83 to 636 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC420978 uterus .c 83 to 665 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DC421105 uterus .c 83 to 675 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DC310830 cerebellum .c 85 to 670 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DC319702 brain .c 85 to 683 1 to 599       599/599
(100 %)
1 diff
(99.9 %id)
DC347335 tongue, tumor tissue .c 85 to 661 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
DC355373   .c 85 to 676 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BG547462 lung .c 85 to 780 1 to 695       695/697
(99 %)
4 diff
(99.5 %id)
BQ938054 leiomyosarcoma, uterus .c 85 to 952 1 to 870       870/887
(98 %)
22 diff
(97.6 %id)
BQ946319 leiomyosarcoma, uterus .c 85 to 936 1 to 861       861/892
(96 %)
13 diff
(98.6 %id)
CB989321 Human Placenta, placenta .c 85 to 851 28 to 816       789/861
(91 %)
26 diff
(97.0 %id)
DC373515 tongue .c 85 to 649 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
BM837149 Ascites, stomach .c 85 to 625 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC402292 testis .c 85 to 649 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC412268 kidney, tumor tissue .c 85 to 622 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC415154 trachea .c 85 to 639 1 to 555       555/562
(98 %)
1 diff
(99.9 %id)
DC423195 uterus .c 85 to 624 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
BG258129 embryonal carcinoma, cell line, testis .c 86 to 808 1 to 724       724/816
(88 %)
16 diff
(98.1 %id)
AF090891 Liver .c 87 to 2861 1 to 2778 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2778/2778
(100 %)
3 diff
(99.9 %id)
AI110675 Liver .c 87 to 726 1 to 640       640/644
(99 %)
3 diff
(99.6 %id)
AF063549   .c 87 to 726 1 to 640       640/644
(99 %)
3 diff
(99.6 %id)
CN404388 embryonic stem cells, DMSO-treated H9 cellline .c 88 to 460 1 to 373       373/373
(100 %)
0 diff
(100 %id)
DR158275 human embryonic stem cells differentiated toan early endodermal cell type .c 88 to 887 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BQ430083 large cell carcinoma, lung .c 90 to 965 7 to 884       878/886
(99 %)
11 diff
(98.8 %id)
BQ220183 melanotic melanoma, skin .c 90 to 947 7 to 867       861/912
(94 %)
11 diff
(98.8 %id)
TI_57232928   .c 90 to 854 19 to 790       772/790
(97 %)
19 diff
(97.6 %id)
DB458055 testis .c 92 to 588 1 to 497       497/497
(100 %)
0 diff
(100 %id)
DA543129   .c 92 to 648 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA233590 brain, neuroepithelial cells .c 92 to 431 1 to 340       340/340
(100 %)
0 diff
(100 %id)
BP274640 Kidney .c 92 to 673 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP375402 uterus .c 92 to 642 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DA289756 hippocampus .c 93 to 659 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CN404389 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 93 to 789 8 to 704       697/704
(99 %)
6 diff
(99.2 %id)
DA467642 cord Blood .c 93 to 667 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA623871 Kidney .c 93 to 637 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA657462   .c 93 to 649 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA707571   .c 93 to 664 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA714457   .c 93 to 639 2 to 548   capped   547/548
(99 %)
0 diff
(100 %id)
DA817401   .c 93 to 660 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA832792 placenta .c 93 to 881 2 to 792   capped   791/795
(99 %)
10 diff
(98.8 %id)
DA959329 Spleen .c 93 to 639 2 to 548   capped   547/548
(99 %)
0 diff
(100 %id)
DB012416 esophageal, tumor tissue .c 93 to 558 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DB091264 testis .c 93 to 662 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB102682 thymus .c 93 to 645 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB199619 trachea .c 93 to 662 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB249567 uterus .c 93 to 660 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB291249 uterus .c 93 to 684 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
ES311036 scalp interfollicular dermis, skin .c 94 to 521 1 to 429       429/430
(99 %)
7 diff
(98.4 %id)
AU103625   .c 94 to 143 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
DA655351   .c 94 to 645 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
ES313554 beard hair, skin .c 95 to 586 1 to 493       493/493
(100 %)
14 diff
(97.2 %id)
BX426667 T cells (Jurkat cell line) .c 96 to 904 1 to 809       809/809
(100 %)
2 diff
(99.8 %id)
AA383721 thymus .c 97 to 399 1 to 303       303/303
(100 %)
0 diff
(100 %id)
CN404387 embryonic stem cells, cell lines H1, H7, andH9 .c 98 to 824 1 to 727       727/727
(100 %)
0 diff
(100 %id)
BG772887 testis .c 100 to 896 1 to 795       795/795
(100 %)
16 diff
(98.0 %id)
DA368889 subthalamic nucleus .c 102 to 642 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BP418764 small intestine .c 102 to 606 1 to 505     Submitted on the opposite strand 505/505
(100 %)
0 diff
(100 %id)
DA733054   .c 102 to 797 2 to 700   capped   699/725
(96 %)
10 diff
(98.7 %id)
U33821   .c 104 to 2470 1 to 2367 Q233H L234V     2367/2367
(100 %)
3 diff
(99.9 %id)
ES313040 beard hair, skin .c 112 to 267 1 to 154       154/154
(100 %)
2 diff
(98.8 %id)
ES313338 beard hair, skin .c 112 to 704 1 to 594       594/594
(100 %)
4 diff
(99.4 %id)
CN404374 embryonic stem cells, cell lines H1, H7, andH9 .c 116 to 521 1 to 406       406/406
(100 %)
0 diff
(100 %id)
ES308795 beard hair, skin .c 120 to 280 1 to 162       162/162
(100 %)
1 diff
(99.4 %id)
BU167279 eye, retinoblastoma .c 131 to 1016 1 to 887       885/899
(98 %)
12 diff
(98.7 %id)
DN601778 human embryonic stem cells .c 138 to 788 1 to 651       651/651
(100 %)
0 diff
(100 %id)
ES312601 frontal balding hair, skin .c 145 to 326 1 to 182       182/185
(98 %)
1 diff
(99.5 %id)
DA964781 stomach .c 163 to 723 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AI148087 uterus .c 168 to 661 494 to 1       494/494
(100 %)
0 diff
(100 %id)
DN989352 brain, whole brain .c 171 to 888 8 to 725       718/725
(99 %)
1 diff
(99.9 %id)
CR618618 HeLa cells Cot 25-normalized .c 1137 to 2854 1 to 1718       1718/1718
(100 %)
0 diff
(100 %id)
AW080447 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1713 to 2470 751 to 1       751/772
(97 %)
18 diff
(97.7 %id)
AI813764 adenocarcinoma, Pancreas .c 1714 to 2467 748 to 1       746/748
(99 %)
22 diff
(97.1 %id)
TI_154090885   .c 1718 to 2465 826 to 84   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 743/889
(83 %)
5 diff
(99.5 %id)
CA434211 lung, Metastatic Chondrosarcoma .c 1718 to 2465 761 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 743/744
(99 %)
5 diff
(99.4 %id)
AK309757 tongue .c 1791 to 3075 1 to 1285   tiling clone,   1285/1285
(100 %)
2 diff
(99.9 %id)
BM476920 leiomyosarcoma, uterus .c 1794 to 2788 1 to 1001       1001/1077
(92 %)
39 diff
(96.4 %id)
DC427331 placenta .c 1944 to 2465 518 to 1       518/529
(97 %)
16 diff
(97.0 %id)
AI078833 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1996 to 2465 470 to 1       470/470
(100 %)
0 diff
(100 %id)
TI_149275974   .c 1997 to 2858 944 to 85   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 860/996
(86 %)
16 diff
(98.4 %id)
CR602905 Placenta Cot 25-normalized .c 1999 to 2465 1 to 467   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 467/467
(100 %)
0 diff
(100 %id)
DB549633 hippocampus .c 2018 to 2464 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
DC427408 placenta .c 2018 to 2465 448 to 1       448/448
(100 %)
7 diff
(98.5 %id)
TI_151732961   .c 2041 to 2465 503 to 79   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 425/997
(42 %)
0 diff
(100 %id)
AI288812 2 pooled tumors (clear cell type), Kidney .c 2046 to 2470 425 to 1       425/425
(100 %)
0 diff
(100 %id)
TI_149273248   .c 2053 to 2861 894 to 88   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 807/808
(99 %)
9 diff
(98.9 %id)
TI_154131606   .c 2068 to 2858 890 to 98   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 793/991
(80 %)
15 diff
(98.5 %id)
TI_154131874   .c 2068 to 2861 881 to 88   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 794/989
(80 %)
9 diff
(99.1 %id)
AA256923 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2087 to 2427 1 to 341       341/341
(100 %)
0 diff
(100 %id)
BM851125 stomach .c 2089 to 2433 1 to 345       345/345
(100 %)
0 diff
(100 %id)
AA872943 2 pooled tumors (clear cell type), Kidney .c 2101 to 2427 1 to 327     Submitted on the opposite strand 327/327
(100 %)
0 diff
(100 %id)
H89626 liver and spleen .c 2128 to 2457 1 to 330       330/330
(100 %)
0 diff
(100 %id)
BG211055   .c 2140 to 3080 1 to 931   tiling clone,   931/1256
(74 %)
35 diff
(97.3 %id)
AA130437 colon, tumor .c 2165 to 2466 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AI686635 Prostate .c 2165 to 2476 312 to 1       312/312
(100 %)
0 diff
(100 %id)
DC427372 placenta .c 2185 to 2645 463 to 1       463/463
(100 %)
7 diff
(98.5 %id)
AI263840 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2196 to 2636 441 to 1       441/441
(100 %)
0 diff
(100 %id)
AI954229 malignant melanoma, metastatic to lymphnode, skin .c 2215 to 2466 252 to 1       252/252
(100 %)
0 diff
(100 %id)
BM968850 lung, Primary Lung Epithelial Cells .c 2221 to 2858 654 to 17   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 638/638
(100 %)
0 diff
(100 %id)
W46171 senescent fibroblast .c 2236 to 2463 1 to 228       228/228
(100 %)
0 diff
(100 %id)
AA394224   .c 2295 to 2466 1 to 172       172/172
(100 %)
0 diff
(100 %id)
TI_159713932   .c 2317 to 2642 60 to 386     Submitted on the opposite strand 327/1057
(30 %)
6 diff
(99.5 %id)
AI826585 lymph node, lymphoma, follicular mixed small and largecell .c 2336 to 2473 138 to 1       138/138
(100 %)
0 diff
(100 %id)
EC535972 Prostate .c 2361 to 2474 114 to 1       114/114
(100 %)
0 diff
(100 %id)
FN061148 breast carcinoma .c 2368 to 2443 1 to 76       76/76
(100 %)
2 diff
(97.4 %id)
CN404386 embryonic stem cells, cell lines H1, H7, andH9 .c 2370 to 2465 1 to 96   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 96/96
(100 %)
0 diff
(100 %id)
TI_149272526   .c 2373 to 2858 574 to 89   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 486/1000
(48 %)
2 diff
(99.8 %id)
TI_154059738   .c 2428 to 2861 524 to 90   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 609/948
(64 %)
20 diff
(97.9 %id)
BJ996983 hepatoblastoma .d 1 to 468 1 to 468   tiling clone,   468/468
(100 %)
0 diff
(100 %id)
AA315460 colon .d 1507 to 1889 1 to 383   tiling clone,   383/383
(100 %)
0 diff
(100 %id)
DB373842 placenta .d 1654 to 2199 546 to 1       546/575
(94 %)
15 diff
(97.4 %id)
T57109 lung .d 1670 to 2199 542 to 1       542/544
(99 %)
16 diff
(97.1 %id)
AA100874   .d 1723 to 2199 479 to 1       479/480
(99 %)
2 diff
(99.6 %id)
BG925756 cartilage .d 1768 to 2145 86 to 463       378/395
(95 %)
6 diff
(98.5 %id)
T33607 brain .d 1796 to 2199 404 to 1       404/404
(100 %)
0 diff
(100 %id)
DB374672 placenta .d 1812 to 2199 390 to 1       390/390
(100 %)
5 diff
(98.8 %id)
BJ996984 hepatoblastoma .d 1819 to 2164 346 to 1       346/346
(100 %)
0 diff
(100 %id)
BQ774825 Bone, Human Chondrosarcoma Cell Line .d 1872 to 2571 40 to 739   tiling clone, Submitted on the opposite strand 700/721
(97 %)
2 diff
(99.8 %id)
CA429466 Cell Line, Chondrosarcoma .d 1872 to 2512 40 to 681     Submitted on the opposite strand 642/663
(96 %)
1 diff
(99.9 %id)
AK296720 tongue, tumor tissue .e 1 to 2222 1 to 2222 L42P tiling clone,   2222/2222
(100 %)
4 diff
(99.9 %id)
DC345737 tongue, tumor tissue .e 1 to 552 1 to 552       552/553
(99 %)
5 diff
(99.1 %id)
AU137916 placenta .f 1 to 796 2 to 799   tiling clone, capped   798/799
(99 %)
11 diff
(98.7 %id)
AJ712499 bone marrow .f 589 to 1071 1 to 483   tiling clone,   483/483
(100 %)
0 diff
(100 %id)
DB377426 placenta .f 929 to 1489 558 to 1   tiling clone,   560/559
(100 %)
14 diff
(97.5 %id)
DC348830   .g 1 to 570 1 to 570   tiling clone,   570/570
(100 %)
2 diff
(99.7 %id)
BF382556 brain, primitive neuroectoderm .g 205 to 773 1 to 567   tiling clone,   567/867
(65 %)
17 diff
(98.1 %id)
BF382816 brain, primitive neuroectoderm .g 205 to 887 1 to 680   tiling clone,   680/715
(95 %)
23 diff
(96.8 %id)
BG611918 adenocarcinoma, Prostate .g 730 to 886 1 to 157   tiling clone,   785/785
(100 %)
33 diff
(95.8 %id)
T93041.
matches multiple genes
lung .h 1 to 274 1 to 276   tiling clone, also hits gene pokee 276/278
(99 %)
10 diff
(96.5 %id)
AI580161 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h 127 to 610 484 to 1   tiling clone,   484/484
(100 %)
0 diff
(100 %id)
BP260987 small intestine .i 1 to 575 6 to 580 V4G G120R tiling clone,   580/580
(100 %)
3 diff
(99.5 %id)
AI833003 colon .j 1 to 775 774 to 1 H11T K12R K13S C14V L16S ... tiling clone,   774/774
(100 %)
8 diff
(99.0 %id)
BM843214 lymph node, stomach .k 1 to 523 1 to 523 exact tiling clone,   523/523
(100 %)
0 diff
(100 %id)
F35679 pectoral muscle (after mastectomy) .k 125 to 357 1 to 233       233/233
(100 %)
1 diff
(99.6 %id)
F23284 pectoral muscle (after mastectomy) .k 139 to 273 1 to 135       135/135
(100 %)
0 diff
(100 %id)
DB159146 thymus .l-u 1 to 546 2 to 548   tiling clone, to resequence, capped   547/547
(100 %)
1 diff
(99.9 %id)
R86892 liver and spleen .l-u 1263 to 1658 1 to 406   tiling clone,   406/467
(86 %)
14 diff
(97.1 %id)
AW975764   .l-u 1310 to 2048 739 to 1 exact   Submitted on the opposite strand 739/739
(100 %)
5 diff
(99.4 %id)
AI744430 colon .l-u 1503 to 2050 549 to 1 exact     549/549
(100 %)
1 diff
(99.9 %id)
DB346716 thymus .l-u 1517 to 2049 535 to 1 F29V P31S D32* to resequence,   535/535
(100 %)
2 diff
(99.7 %id)
AA777668 liver and spleen .l-u 1529 to 2049 521 to 1 exact tiling clone,   521/521
(100 %)
0 diff
(100 %id)
AA731542 germinal center B cell .l-u 1619 to 2058 440 to 1 exact     440/440
(100 %)
2 diff
(99.6 %id)
R86972 liver and spleen .l-u 1670 to 2040 376 to 1 D7X H41X D47X     376/376
(100 %)
5 diff
(98.7 %id)
BG563239 Liver .l-u 1693 to 2372 1 to 681 exact     681/681
(100 %)
39 diff
(94.3 %id)
AA887638 colon, colon tumor RER+ .l-u 1802 to 2048 247 to 1 exact     247/247
(100 %)
0 diff
(100 %id)
AI208724   .l-u 1802 to 2051 250 to 1 exact     250/250
(100 %)
0 diff
(100 %id)
GD146660   .l-u 1969 to 2049 1 to 81   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 81/81
(100 %)
3 diff
(96.3 %id)
GD149952   .l-u 1974 to 2064 3 to 93       91/93
(97 %)
6 diff
(93.6 %id)
GD155389   .l-u 1978 to 2065 8 to 95       88/95
(92 %)
6 diff
(93.7 %id)
DR979338 placenta .l-u 1978 to 2059 8 to 88     Submitted on the opposite strand 81/88
(92 %)
6 diff
(93.2 %id)
CA419842 Bone, Human Chondrosarcoma Cell Line .l-u 2020 to 2445 441 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 426/426
(100 %)
0 diff
(100 %id)
DB546521 hippocampus .l-u 2022 to 2445 1 to 424     Submitted on the opposite strand 424/424
(100 %)
0 diff
(100 %id)
DB546470 hippocampus .l-u 2024 to 2445 1 to 422     Submitted on the opposite strand 422/422
(100 %)
0 diff
(100 %id)
AI735382 aorta .l-u 2044 to 2117 1 to 74     Submitted on the opposite strand 74/74
(100 %)
0 diff
(100 %id)
FN077928 breast carcinoma .l-u 2064 to 2119 55 to 1     Submitted on the opposite strand 55/56
(98 %)
1 diff
(98.3 %id)
GD139711   .l-u 2113 to 2237 1 to 125       125/129
(96 %)
2 diff
(98.5 %id)
AA282072 germinal center B cell .l-u 2143 to 2445 303 to 1       303/303
(100 %)
0 diff
(100 %id)
AI492939 Kidney .l-u 2159 to 2445 287 to 1       287/287
(100 %)
0 diff
(100 %id)
FN045914 breast carcinoma .l-u 2194 to 2311 1 to 118       118/122
(96 %)
7 diff
(94.3 %id)
AI362373 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .l-u 2236 to 2443 208 to 1       208/208
(100 %)
0 diff
(100 %id)
BE832897 ovary .l-u 2240 to 2399 1 to 156       156/156
(100 %)
7 diff
(95.6 %id)
CB853610 Human Lung Epithelial cells, lung .l-u 2245 to 2950 724 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 706/708
(99 %)
2 diff
(99.8 %id)
TI_149280579   .l-u 2258 to 2950 773 to 81   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 693/694
(99 %)
0 diff
(100 %id)
FN162660 breast carcinoma .l-u 2265 to 2359 1 to 94       94/94
(100 %)
2 diff
(97.9 %id)
BU679319 lung, Primary Lung Epithelial Cells .l-u 2278 to 2950 691 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 673/673
(100 %)
0 diff
(100 %id)
BQ014897 Chondrosarcoma, Left Pubic Bone .l-u 2294 to 2944 666 to 16   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 651/651
(100 %)
2 diff
(99.7 %id)
AI167590 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 2330 to 2736 407 to 1       407/407
(100 %)
0 diff
(100 %id)
FN047323 breast carcinoma .l-u 2334 to 2430 1 to 97       97/99
(97 %)
1 diff
(99.0 %id)
FN090815 breast carcinoma .l-u 2372 to 2432 75 to 14     Submitted on the opposite strand 62/75
(82 %)
0 diff
(100 %id)
TI_149283159   .l-u 2378 to 2938 667 to 107   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 561/764
(73 %)
3 diff
(99.7 %id)
DB553566 hypothalamus .l-u 2428 to 2859 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
AI650286 Kidney .l-u 2431 to 2950 532 to 13   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 520/520
(100 %)
0 diff
(100 %id)
BU680065 lung, Primary Lung Epithelial Cells .l-u 2438 to 2938 519 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 501/501
(100 %)
0 diff
(100 %id)
AI499145 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .l-u 2447 to 2941 495 to 1       495/495
(100 %)
0 diff
(100 %id)
AI122566 heart .l-u 2475 to 2951 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AW903408 nervous_normal .l-u 2492 to 2581 107 to 19       89/107
(83 %)
0 diff
(100 %id)
AI669086 Prostate .l-u 2555 to 2950 396 to 1       396/396
(100 %)
0 diff
(100 %id)
FN056589 breast carcinoma .l-u 2571 to 2678 120 to 12     Submitted on the opposite strand 109/120
(90 %)
0 diff
(100 %id)
FN061434 breast carcinoma .l-u 2571 to 2687 117 to 1     Submitted on the opposite strand 117/117
(100 %)
0 diff
(100 %id)
BF247550 hypernephroma, Kidney .l-u 2581 to 3246 1 to 663       663/880
(75 %)
26 diff
(97.1 %id)
BM769055 stomach .l-u 2612 to 2892 1 to 281       281/281
(100 %)
0 diff
(100 %id)
BM465239 eye, retinoblastoma .l-u 2644 to 3339 1 to 702   tiling clone,   702/1005
(69 %)
17 diff
(98.4 %id)
N80399 multiple sclerosis lesions .l-u 2648 to 3012 1 to 365       365/365
(100 %)
0 diff
(100 %id)
N48922 multiple sclerosis lesions .l-u 2660 to 3134 1 to 481       481/483
(99 %)
10 diff
(98.0 %id)
N48746 multiple sclerosis lesions .l-u 2701 to 3116 1 to 423       423/423
(100 %)
12 diff
(97.2 %id)
AA481381 ovarian tumor, ovary .l-u 2799 to 3039 1 to 241       241/241
(100 %)
0 diff
(100 %id)
R22858 placenta .l-u 2803 to 3121 1 to 331       331/361
(91 %)
15 diff
(95.9 %id)
H13912 placenta .l-u 2803 to 3233 1 to 437       437/438
(99 %)
13 diff
(97.1 %id)
AA725361 parathyroid gland, parathyroid tumor .l-u 2814 to 2941 142 to 15   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 128/128
(100 %)
0 diff
(100 %id)
FN119929 breast carcinoma .l-u 2825 to 2931 1 to 110       110/110
(100 %)
6 diff
(94.6 %id)
FN123898 breast carcinoma .l-u 2880 to 2934 56 to 2     Submitted on the opposite strand 55/63
(87 %)
0 diff
(100 %id)
BF363948 nervous_normal .l-u 2909 to 3283 393 to 19   tiling clone,   375/404
(92 %)
0 diff
(100 %id)
N46418 multiple sclerosis lesions .l-u 3213 to 3760 552 to 1       552/552
(100 %)
9 diff
(98.4 %id)
TI_151777752   .l-u 3265 to 3864 75 to 674   tiling clone,   600/1425
(42 %)
5 diff
(99.7 %id)
BF510070   .l-u 3290 to 3760 488 to 18   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 471/471
(100 %)
1 diff
(99.8 %id)
AI419381 brain, glioblastoma (pooled) .l-u 3298 to 3760 462 to 1       462/466
(99 %)
1 diff
(99.8 %id)
N56890 multiple sclerosis lesions .l-u 3348 to 3761 417 to 1       417/417
(100 %)
3 diff
(99.3 %id)
N67978 multiple sclerosis lesions .l-u 3365 to 3760 398 to 1       398/398
(100 %)
4 diff
(99.0 %id)
AI393430 pooled .l-u 3407 to 3864 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AA632571 thyroid .l-u 3416 to 3760 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
AA565928 adrenal adenoma, adrenal gland .l-u 3428 to 3859 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AA436438 ovarian tumor, ovary .l-u 3439 to 3760 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AW468864 pooled .l-u 3449 to 3865 417 to 1       417/417
(100 %)
0 diff
(100 %id)
AA904477 pooled .l-u 3450 to 3767 322 to 5       318/322
(98 %)
0 diff
(100 %id)
TI_151752206   .l-u 3711 to 3858 170 to 24   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 147/147
(100 %)
1 diff
(99.4 %id)
EB362568 eye, lens .l-u 3756 to 4194 1 to 439       439/439
(100 %)
6 diff
(98.7 %id)
AL047908 uterus .l-u 3758 to 4253 26 to 521   tiling clone,   496/521
(95 %)
0 diff
(100 %id)
DB542402.
matches multiple genes
hippocampus .l-u 3767 to 4222 456 to 1     also hits gene JAZF1 456/456
(100 %)
0 diff
(100 %id)
DB542972.
matches multiple genes
hippocampus .l-u 3767 to 4252 486 to 1     also hits gene JAZF1 486/486
(100 %)
0 diff
(100 %id)
DB547337.
matches multiple genes
hippocampus .l-u 3767 to 4199 433 to 1     also hits gene JAZF1 433/433
(100 %)
0 diff
(100 %id)
DB553015.
matches multiple genes
hippocampus .l-u 3767 to 4210 454 to 3     also hits gene JAZF1 452/454
(99 %)
0 diff
(100 %id)
BP418506 small intestine .l-u 4100 to 4488 394 to 4   tiling clone,   391/394
(99 %)
0 diff
(100 %id)
H56381 pineal gland .l-u 4217 to 4529 5 to 323   tiling clone, fully sequenced,   319/323
(98 %)
7 diff
(97.9 %id)
H56165 pineal gland .l-u 4499 to 4868 379 to 1   tiling clone, fully sequenced,   379/379
(100 %)
11 diff
(97.1 %id)
DB251028 uterus .m 1 to 501 2 to 503   tiling clone, capped   502/502
(100 %)
2 diff
(99.7 %id)
CN256561 embryonic stem cells, DMSO-treated H9 cellline .m 361 to 1033 9 to 681   tiling clone,   673/681
(98 %)
6 diff
(99.2 %id)
DB233734 trachea .m 366 to 931 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
AW268570 pooled .m 439 to 908 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AA995115 pooled .m 441 to 798 1 to 358     Submitted on the opposite strand 358/358
(100 %)
0 diff
(100 %id)
DA393263 thalamus .m 1018 to 1615 2 to 598   tiling clone, capped   597/597
(100 %)
3 diff
(99.5 %id)
BX480069   .m 1072 to 1392 1 to 321       321/321
(100 %)
11 diff
(96.6 %id)
DA544354   .m 1091 to 1642 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA812143 ovary, tumor tissue .m 1111 to 1864 2 to 757   capped   756/756
(100 %)
8 diff
(99.0 %id)
Z44834 brain, total brain .m 1207 to 1540 1 to 334       334/334
(100 %)
1 diff
(99.8 %id)
R51767 whole brain .m 1208 to 1693 1 to 490       490/503
(97 %)
16 diff
(96.9 %id)
H23397 whole brain .m 1252 to 1685 1 to 444       444/456
(97 %)
12 diff
(97.4 %id)
BE152515 head_neck .m 1277 to 1587 329 to 14     Submitted on the opposite strand 316/339
(93 %)
0 diff
(100 %id)
DA420341 cervix .m 1429 to 1993 2 to 566   tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
DA418297 thalamus .m 1566 to 2128 2 to 565   tiling clone, capped   564/564
(100 %)
4 diff
(99.3 %id)
BY797270 eye .m 1860 to 2266 1 to 407       407/407
(100 %)
0 diff
(100 %id)
CB267598 adipose .m 1869 to 2436 1 to 568   tiling clone,   568/568
(100 %)
0 diff
(100 %id)
DB371457 ovary, tumor tissue .m 1982 to 2544 565 to 1       565/565
(100 %)
6 diff
(99.0 %id)
DB351099 uterus .m 2001 to 2544 544 to 1       544/544
(100 %)
0 diff
(100 %id)
AW129955 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .m 2090 to 2551 462 to 1       462/462
(100 %)
1 diff
(99.8 %id)
R51768 whole brain .m 2098 to 2552 463 to 1       463/466
(99 %)
12 diff
(97.5 %id)
H23286 whole brain .m 2163 to 2552 395 to 1   tiling clone,   395/395
(100 %)
11 diff
(97.3 %id)
AI886010 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .m 2191 to 2544 348 to 1       348/348
(100 %)
7 diff
(98.0 %id)
F03805 brain, total brain .m 2277 to 2544 268 to 1       268/268
(100 %)
4 diff
(98.6 %id)
CB993165 placenta, pre-eclamptic placenta .m 2516 to 2819 510 to 819   tiling clone,   310/819
(37 %)
6 diff
(99.3 %id)
DB312891 cervix .m 2691 to 3248 560 to 1 S33R V34C S36L V37C S38E tiling clone,   560/560
(100 %)
2 diff
(99.7 %id)
AA928912 carcinoid, lung .m 2736 to 3177 1 to 442 exact tiling clone, Submitted on the opposite strand 442/442
(100 %)
6 diff
(98.7 %id)
AV729653 hypothalamus .n-u 1 to 713 1 to 704 I9V R50Q K75Q G77F L79R ... tiling clone,   704/708
(99 %)
18 diff
(97.5 %id)
BF352115 head_neck .n-u 56 to 161 106 to 1       106/106
(100 %)
2 diff
(98.2 %id)
DB136671 thymus .o-u 1 to 547 2 to 548 exact tiling clone, capped   547/547
(100 %)
3 diff
(99.5 %id)
BF061257 follicular carcinoma, thyroid .o-u 359 to 670 7 to 318   tiling clone, Submitted on the opposite strand 312/318
(98 %)
6 diff
(98.2 %id)
CB116582 Liver .p 1 to 527 1 to 527 L3S tiling clone,   527/527
(100 %)
10 diff
(98.2 %id)
AI857769 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .p 498 to 649 152 to 1   tiling clone,   152/152
(100 %)
0 diff
(100 %id)
BX954752   .q-u 1 to 618 1 to 618 exact tiling clone,   618/618
(100 %)
0 diff
(100 %id)
BU665472 blood .r 1 to 598 1 to 598 exact tiling clone,   598/598
(100 %)
6 diff
(99.0 %id)
DB108807 thymus .s 1 to 578 2 to 580 S16V E17R Q18A N19K G20W ... tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
AW959407   .s 41 to 502 1 to 475 S26A V31G tiling clone,   475/486
(97 %)
34 diff
(93.1 %id)
BX491104   .t-u 1 to 539 1 to 538 R47G tiling clone,   538/538
(100 %)
6 diff
(98.9 %id)
BG929350 cartilage .u-u 1 to 385 86 to 473 exact tiling clone, AAA   388/492
(78 %)
6 diff
(98.8 %id)
BX500115 Liver Gene TAX1BP1, variant not shown              
DA857477 placenta Gene TAX1BP1, variant not shown       capped      
BX646562   Gene TAX1BP1, variant not shown              
AA384605 thyroid gland Gene TAX1BP1, variant not shown              
BF874567 lung_tumor Gene TAX1BP1, variant not shown              
DB355316 whole embryo, mainly head Gene TAX1BP1, variant not shown              
DA568759 whole embryo, mainly head Gene TAX1BP1, variant not shown       capped      
AK301064 Spleen Gene TAX1BP1, variant not shown         Suspected internal deletion, this clone was ignored    
CV352020 placenta_normal Gene TAX1BP1, variant not shown         Submitted on the opposite strand    
BI058958 placenta_normal Gene TAX1BP1, variant not shown              
AA532517 normal prostatic epithelial cells, Prostate Gene TAX1BP1, variant not shown              
AI791630 normal prostatic epithelial cells, Prostate Gene TAX1BP1, variant not shown       AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS    
AI821484 normal prostatic epithelial cells, Prostate Gene TAX1BP1, variant not shown       AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS    
AA714381 germinal center B-cells, tonsil Gene TAX1BP1, variant not shown              
TI_57187489   Gene TAX1BP1, variant not shown         This clone was ignored    
DC389316 Spleen Gene TAX1BP1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_158435015   Gene TAX1BP1, variant not shown       AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS    
DB227521 trachea Gene TAX1BP1, variant not shown       capped      
DB349793 trachea Gene TAX1BP1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n-u, .o-u, .p, .q-u, .r, .s, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI