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Gene ABI3BPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
320 supporting clones for gene ABI3BP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA559018   .a 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
2 diff
(99.7 %id)
DA986252 synovial membrane tissue from rheumatioidarthritis .a 1 to 365 2 to 367   tiling clone, capped   366/366
(100 %)
1 diff
(99.8 %id)
BX648726 human salivary gland .a 321 to 6055 1 to 4639   tiling clone, available from DKFZ, AAA Suspected internal deletion, possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4639/4639
(100 %)
6 diff
(99.9 %id)
AK299938 brain .b 1 to 3650 1 to 3650 T61A tiling clone,   3650/3650
(100 %)
2 diff
(100.0 %id)
DC377978 brain .b 1 to 541 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
DC417734 trachea .b 1033 to 1542 1 to 511       511/511
(100 %)
2 diff
(99.7 %id)
DC372886   .b 1115 to 1565 1 to 451       451/451
(100 %)
0 diff
(100 %id)
DA603170   .b 1268 to 1844 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA976383 synovial membrane tissue from rheumatioidarthritis .b 1427 to 1984 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB319983   .b 2886 to 3434 549 to 1   tiling clone,   549/549
(100 %)
1 diff
(99.9 %id)
BX284017 skin .b 3280 to 3768 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BG741740 skin .b 3280 to 4061 1 to 782   tiling clone,   782/782
(100 %)
0 diff
(100 %id)
BG938930 Bone, Hip .b 3323 to 4001 1 to 679       679/679
(100 %)
7 diff
(99.0 %id)
BG539673 lung .b 3422 to 4115 2 to 691       690/979
(70 %)
31 diff
(96.9 %id)
BP228387   .b 3505 to 4088 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP227482   .b 3541 to 4120 1 to 580       580/580
(100 %)
5 diff
(99.2 %id)
FN095569 breast carcinoma .b 3556 to 3668 1 to 107       107/107
(100 %)
8 diff
(92.6 %id)
CR745060 heart .b 3608 to 4407 1 to 808       808/810
(99 %)
21 diff
(97.5 %id)
W81545 heart .b 3608 to 3709 1 to 102       102/102
(100 %)
0 diff
(100 %id)
FN048930 breast carcinoma .b 3618 to 3728 1 to 111       111/111
(100 %)
0 diff
(100 %id)
FN176840 breast carcinoma .b 3622 to 3728 1 to 104       104/104
(100 %)
5 diff
(95.2 %id)
AA345718 gall bladder .b 3631 to 3855 1 to 225       225/225
(100 %)
0 diff
(100 %id)
BX434066 placenta .b 3661 to 4550 896 to 1       896/897
(99 %)
28 diff
(96.9 %id)
BG679490 skin, squamous cell carcinoma .b 3662 to 4508 1 to 866       866/1111
(77 %)
16 diff
(98.6 %id)
BG925889 cartilage .b 3692 to 4087 86 to 481       396/413
(95 %)
10 diff
(97.6 %id)
AA256582 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3695 to 4114 1 to 420       420/420
(100 %)
0 diff
(100 %id)
CB269247 adipose .b 3708 to 4363 665 to 7     Submitted on the opposite strand 659/665
(99 %)
0 diff
(100 %id)
TI_154102380   .b 3757 to 4553 876 to 90   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 787/789
(99 %)
20 diff
(97.5 %id)
BQ640202 eye, retina .b 3825 to 4307 1 to 484       484/484
(100 %)
1 diff
(99.8 %id)
D45547 lung .b 3829 to 4066 1 to 238     Submitted on the opposite strand 238/238
(100 %)
0 diff
(100 %id)
TI_154017065   .b 3862 to 4552 805 to 111   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 695/697
(99 %)
6 diff
(99.2 %id)
BP275583 Kidney .b 3888 to 4460 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
AI800234 Kidney .b 3903 to 4366 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
H28492 breast .b 3915 to 4292 1 to 381       381/417
(91 %)
5 diff
(98.9 %id)
CA413954 Chondrosarcoma Grade II, Left Pelvis .b 3919 to 4553 654 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 636/636
(100 %)
1 diff
(99.9 %id)
BQ773861 Chondrosarcoma Grade II, Left Pelvis .b 3919 to 4553 653 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 635/635
(100 %)
3 diff
(99.6 %id)
BM995120 Chondrosarcoma, Left Pubic Bone .b 3922 to 4552 653 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 635/635
(100 %)
3 diff
(99.6 %id)
TI_154034508   .b 3924 to 4732 884 to 83   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 802/818
(98 %)
28 diff
(96.6 %id)
BQ027114 Chondrosarcoma, Left Pubic Bone .b 3925 to 4553 651 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 633/633
(100 %)
2 diff
(99.7 %id)
CA445477 Chondrosarcoma, Left Pubic Bone .b 3928 to 4553 648 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 630/630
(100 %)
4 diff
(99.4 %id)
BF361753 nervous_normal .b 3953 to 4468 2 to 525       524/525
(99 %)
8 diff
(98.5 %id)
AW893859 nervous_normal .b 3956 to 4468 1 to 516       516/516
(100 %)
8 diff
(98.5 %id)
DB513922 testis .b 3958 to 4361 1 to 404     Submitted on the opposite strand 404/405
(99 %)
2 diff
(99.6 %id)
BQ008799 Chondrosarcoma, Left Pelvis .b 3958 to 4553 618 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 600/600
(100 %)
3 diff
(99.5 %id)
CA414591 Chondrosarcoma Grade II, Left Pelvis .b 3968 to 4553 602 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 584/584
(100 %)
5 diff
(99.2 %id)
CA437474 lung, Metastatic Chondrosarcoma .b 3974 to 4552 599 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 581/581
(100 %)
3 diff
(99.5 %id)
BP396596 pancreatic islet .b 3979 to 4352 1 to 378     Submitted on the opposite strand 378/378
(100 %)
6 diff
(98.5 %id)
AI827458 pooled .b 3992 to 4553 581 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 566/566
(100 %)
8 diff
(98.6 %id)
D62975   .b 3996 to 4416 1 to 417       417/417
(100 %)
4 diff
(99.1 %id)
AA405577   .b 4007 to 4450 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
AA405578   .b 4007 to 4439 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
BU753210 placenta .b 4007 to 4552 559 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 542/542
(100 %)
6 diff
(98.9 %id)
AI627268 Kidney .b 4018 to 4553 551 to 12       540/551
(98 %)
0 diff
(100 %id)
DB319928   .b 4022 to 4553 539 to 1       539/539
(100 %)
9 diff
(98.4 %id)
AA143272 Pancreas .b 4022 to 4554 533 to 1     Submitted on the opposite strand 533/534
(99 %)
5 diff
(99.1 %id)
AA852344 Bone, Hip .b 4032 to 4328 304 to 4       301/304
(99 %)
0 diff
(100 %id)
AI819602 lymph node, lymphoma, follicular mixed small and largecell .b 4033 to 4555 528 to 6       523/528
(99 %)
0 diff
(100 %id)
AI654812 pooled germ cell tumors .b 4035 to 4553 523 to 1       523/523
(100 %)
4 diff
(99.3 %id)
AI143558 heart .b 4061 to 4555 497 to 3   tiling clone,   495/497
(99 %)
0 diff
(100 %id)
AI378667 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4078 to 4553 488 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 476/476
(100 %)
0 diff
(100 %id)
AI419376 brain, glioblastoma (pooled) .b 4094 to 4553 464 to 1       464/464
(100 %)
3 diff
(99.4 %id)
AI399783 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4100 to 4555 464 to 5       460/464
(99 %)
0 diff
(100 %id)
AI093158 heart .b 4105 to 4553 464 to 12   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 453/453
(100 %)
2 diff
(99.6 %id)
AI421066 Prostate .b 4110 to 4555 453 to 8       446/453
(98 %)
0 diff
(100 %id)
AI338834 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4113 to 4553 445 to 1       445/445
(100 %)
2 diff
(99.6 %id)
AW022777 cochlea, ear .b 4113 to 4697 1 to 590       590/590
(100 %)
7 diff
(98.9 %id)
AI082388 breast .b 4120 to 4555 442 to 3       440/442
(99 %)
0 diff
(100 %id)
AI675002 Prostate .b 4130 to 4545 428 to 10       419/428
(97 %)
0 diff
(100 %id)
FN125986 breast carcinoma .b 4142 to 4233 90 to 1     Submitted on the opposite strand 90/90
(100 %)
2 diff
(97.8 %id)
AI308129 2 pooled tumors (clear cell type), Kidney .b 4142 to 4553 434 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 416/416
(100 %)
3 diff
(99.3 %id)
AI962653 pooled germ cell tumors .b 4152 to 4553 406 to 1       406/406
(100 %)
2 diff
(99.6 %id)
AI751916 Bone, Hip .b 4157 to 4542 397 to 8       390/397
(98 %)
0 diff
(100 %id)
CA443594 lung, Metastatic Chondrosarcoma .b 4160 to 4732 594 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 576/582
(98 %)
2 diff
(99.7 %id)
BF434567 Kidney .b 4161 to 4553 406 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 393/393
(100 %)
9 diff
(97.8 %id)
AI088303 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4171 to 4555 387 to 3       385/387
(99 %)
0 diff
(100 %id)
AW015280   .b 4173 to 4553 402 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 385/385
(100 %)
2 diff
(99.5 %id)
AI247176 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 4176 to 4732 560 to 1       560/560
(100 %)
8 diff
(98.6 %id)
AA318231 retina .b 4193 to 4523 1 to 336       336/350
(96 %)
4 diff
(98.9 %id)
AA636051 normal prostate, Prostate .b 4196 to 4553 364 to 1       364/364
(100 %)
8 diff
(97.9 %id)
EL946014 eyeball .b 4205 to 4542 1 to 342       342/342
(100 %)
6 diff
(98.3 %id)
AI141051 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4212 to 4734 530 to 3   tiling clone,   528/530
(99 %)
0 diff
(100 %id)
AW006261 pooled germ cell tumors .b 4220 to 4543 335 to 11       325/335
(97 %)
0 diff
(100 %id)
AW665897 pooled .b 4223 to 4726 515 to 8       508/515
(98 %)
0 diff
(100 %id)
AW964383   .b 4225 to 4732 1 to 512   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 512/512
(100 %)
2 diff
(99.7 %id)
CB051917 leiomyosarcoma, soft tissue .b 4230 to 4496 1 to 267       267/267
(100 %)
2 diff
(99.3 %id)
AI633550 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4235 to 4630 544 to 145       400/544
(73 %)
0 diff
(100 %id)
BP421984 small intestine .b 4251 to 4555 2 to 305     Submitted on the opposite strand 304/307
(99 %)
5 diff
(98.4 %id)
AI081761 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4255 to 4732 482 to 1       482/482
(100 %)
3 diff
(99.4 %id)
FN069030 breast carcinoma .b 4279 to 4339 63 to 4     Submitted on the opposite strand 60/64
(93 %)
0 diff
(100 %id)
AI379282 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4279 to 4630 525 to 170   AAA   356/504
(70 %)
0 diff
(100 %id)
AA770096   .b 4288 to 4553 269 to 1       269/269
(100 %)
3 diff
(98.9 %id)
D79724 aorta .b 4288 to 4497 1 to 212       212/213
(99 %)
9 diff
(95.8 %id)
AA625818 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4288 to 4555 272 to 1       272/272
(100 %)
2 diff
(99.3 %id)
W81546 heart .b 4295 to 4555 265 to 1       265/265
(100 %)
2 diff
(99.3 %id)
AI867823 pooled germ cell tumors .b 4295 to 4555 271 to 8       264/271
(97 %)
0 diff
(100 %id)
AA897387 pooled .b 4322 to 4553 232 to 1       232/239
(97 %)
0 diff
(100 %id)
AA938549 2 pooled tumors (clear cell type), Kidney .b 4322 to 4734 414 to 2       413/427
(96 %)
0 diff
(100 %id)
AI219502 pooled .b 4322 to 4552 231 to 1       231/238
(97 %)
0 diff
(100 %id)
AI925096 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 4324 to 4555 237 to 6       232/237
(97 %)
0 diff
(100 %id)
AI886278 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 4341 to 4552 242 to 31   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 212/212
(100 %)
5 diff
(97.7 %id)
CF596481 Stomach, adenocarcinoma .b 4359 to 4553 1 to 195       195/196
(99 %)
3 diff
(98.5 %id)
AW471460 adenocarcinoma, Pancreas .b 4361 to 4554 194 to 1       194/194
(100 %)
0 diff
(100 %id)
BG938931 Bone, Hip .b 4366 to 4555 198 to 8       191/198
(96 %)
0 diff
(100 %id)
AA628653   .b 4369 to 4630 269 to 8       262/269
(97 %)
0 diff
(100 %id)
AA328200   .b 4391 to 4553 1 to 163       163/163
(100 %)
0 diff
(100 %id)
AW952419   .b 4392 to 4553 1 to 162   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 162/162
(100 %)
0 diff
(100 %id)
CD356360 Blood vessels - aorta, basilar and artery .b 4396 to 4553 1 to 158       158/197
(80 %)
2 diff
(99.0 %id)
BI003480 head_normal .b 4413 to 4578 1 to 161       161/165
(97 %)
6 diff
(96.4 %id)
BQ359727 head_normal .b 4416 to 4578 9 to 163       155/169
(91 %)
10 diff
(94.1 %id)
BI003522 head_normal .b 4421 to 4578 11 to 166       156/185
(84 %)
6 diff
(96.8 %id)
BE501280 pooled germ cell tumors .b 4436 to 4553 118 to 1       118/118
(100 %)
0 diff
(100 %id)
BI003525 head_normal .b 4437 to 4578 1 to 137       137/164
(83 %)
9 diff
(94.6 %id)
FN052487 breast carcinoma .b 4608 to 4732 1 to 133       133/133
(100 %)
6 diff
(95.5 %id)
AA366226 Pancreas .b 4619 to 4884 270 to 1   tiling clone, Submitted on the opposite strand 270/346
(78 %)
7 diff
(98.0 %id)
BP326550 prostata .c 1 to 581 1 to 581   tiling clone,   581/582
(99 %)
13 diff
(97.8 %id)
BP335920 coronary artery .c 18 to 599 1 to 582       582/582
(100 %)
0 diff
(100 %id)
NM_015429.3   .c 26 to 4496 1 to 4471 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4471/4471
(100 %)
0 diff
(100 %id)
DA342832 substantia nigra .c 27 to 600 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BX471996   .c 27 to 589 1 to 564       564/564
(100 %)
6 diff
(99.0 %id)
DA158209 amygdala .c 29 to 580 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
TI_57180364   .c 39 to 914 23 to 904       885/905
(97 %)
32 diff
(96.5 %id)
CD692960 normal nasopharynx .c 43 to 390 23 to 369       347/391
(88 %)
8 diff
(98.0 %id)
BC030221 Lung, Spleen, fetal, pooled .c 46 to 4496 1 to 4455 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4455/4455
(100 %)
5 diff
(99.9 %id)
BI770363 pooled lung and spleen .c 46 to 914 1 to 875       878/876
(100 %)
34 diff
(96.2 %id)
DA751596   .c 48 to 599 2 to 552   capped   551/557
(98 %)
6 diff
(99.0 %id)
DB223784 trachea .c 48 to 599 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
AL597809   .c 51 to 658 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
AL701288 human skeletal muscle .c 51 to 654 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
DB068757 testis .c 53 to 599 2 to 548   capped   547/548
(99 %)
5 diff
(99.1 %id)
BP337448 coronary artery .c 54 to 636 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB277386 uterus .c 54 to 583 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DB220796 trachea .c 56 to 622 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA552902   .c 58 to 599 2 to 543   capped   542/546
(99 %)
6 diff
(99.0 %id)
DA553195   .c 58 to 629 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA856723 placenta .c 58 to 599 2 to 543   capped   542/548
(98 %)
6 diff
(99.0 %id)
DB227633 trachea .c 58 to 612 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CD694602 normal nasopharynx .c 60 to 454 23 to 417       395/417
(94 %)
7 diff
(98.4 %id)
DA560269 heart .c 60 to 625 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AL709618 human skeletal muscle .c 61 to 590 1 to 530       530/530
(100 %)
9 diff
(98.4 %id)
DA579772   .c 63 to 610 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
CN481685 eye .c 63 to 666 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
DA920093 small intestine .c 63 to 618 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA934736 Spleen .c 63 to 659 2 to 597   capped   596/596
(100 %)
3 diff
(99.5 %id)
DA983218 synovial membrane tissue from rheumatioidarthritis .c 63 to 599 2 to 538   capped   537/547
(98 %)
6 diff
(99.0 %id)
DR005279 Prostate .c 63 to 799 7 to 743       737/743
(99 %)
9 diff
(98.8 %id)
BP218176 caudate nucleus .c 66 to 648 1 to 583       583/583
(100 %)
13 diff
(97.8 %id)
DA787662 brain .c 67 to 654 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA961550 Spleen .c 67 to 641 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
R81588 placenta .c 70 to 460 1 to 398       396/423
(93 %)
11 diff
(97.4 %id)
DA994460 synovial membrane tissue from rheumatioidarthritis .c 73 to 624 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
BX357045 Placenta Cot 25-normalized .c 88 to 1232 1 to 1142       1142/1142
(100 %)
7 diff
(99.4 %id)
DA850635 placenta .c 92 to 619 2 to 529   capped   528/528
(100 %)
2 diff
(99.7 %id)
DA995667 synovial membrane tissue from rheumatioidarthritis .c 92 to 672 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
AL706242 human skeletal muscle .c 93 to 845 1 to 753       753/753
(100 %)
4 diff
(99.5 %id)
AL706230 human skeletal muscle .c 94 to 845 1 to 753       753/753
(100 %)
5 diff
(99.4 %id)
BP336495 coronary artery .c 94 to 674 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
AU279455   .c 95 to 662 1 to 568       568/568
(100 %)
6 diff
(99.0 %id)
DA852014 placenta .c 95 to 644 2 to 551   capped   550/550
(100 %)
4 diff
(99.3 %id)
BP335539 coronary artery .c 95 to 677 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP335730 coronary artery .c 95 to 677 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP336402 coronary artery .c 95 to 677 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP336658 coronary artery .c 95 to 687 1 to 593   tiling clone,   593/593
(100 %)
0 diff
(100 %id)
BP336761 coronary artery .c 95 to 688 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
BP364195 lung .c 95 to 676 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA551503   .c 96 to 617 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
DA559166   .c 96 to 648 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA579061   .c 96 to 649 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA580153   .c 96 to 663 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA591415 lung .c 96 to 660 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA597900   .c 96 to 654 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA598630   .c 96 to 649 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DA662813   .c 96 to 636 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA858562 placenta .c 96 to 589 2 to 495   capped   494/494
(100 %)
2 diff
(99.6 %id)
DA992053 synovial membrane tissue from rheumatioidarthritis .c 96 to 660 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA862365 placenta .c 98 to 655 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DA581927 lung .c 102 to 559 2 to 459   capped   458/483
(94 %)
2 diff
(99.6 %id)
DB223935 trachea .c 102 to 662 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BX474416   .c 106 to 454 9 to 355       341/355
(96 %)
9 diff
(97.5 %id)
TI_1948149601   .c 110 to 946 130 to 961       834/1417
(58 %)
22 diff
(98.5 %id)
TI_1948149602   .c 110 to 1045 122 to 1056       935/1347
(69 %)
22 diff
(98.4 %id)
TI_1948149889   .c 110 to 948 136 to 969       834/1356
(61 %)
22 diff
(98.4 %id)
TI_1948149890   .c 110 to 1052 126 to 1066       941/1330
(70 %)
28 diff
(97.9 %id)
TI_1948150187   .c 110 to 1064 130 to 1087       958/1428
(67 %)
37 diff
(97.5 %id)
TI_1948150188   .c 110 to 950 120 to 960       841/1340
(62 %)
11 diff
(99.2 %id)
TI_1948150504   .c 110 to 1052 128 to 1066       939/1386
(67 %)
37 diff
(97.4 %id)
TI_1948150505   .c 110 to 1154 125 to 1158       1034/1382
(74 %)
23 diff
(98.4 %id)
CV029515 mixed .c 111 to 778 1 to 668       668/732
(91 %)
10 diff
(98.7 %id)
AA742544 pooled germ cell tumors .c 119 to 615 495 to 1       495/495
(100 %)
4 diff
(99.2 %id)
AA009827 heart .c 120 to 220 1 to 101   fully sequenced,   101/101
(100 %)
5 diff
(95.1 %id)
BX103382 heart .c 121 to 626 1 to 506   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 506/508
(99 %)
6 diff
(98.9 %id)
CV572829 cornea, eye .c 142 to 729 1 to 588       588/588
(100 %)
0 diff
(100 %id)
AA009717 heart .c 188 to 613 426 to 1   fully sequenced,   426/426
(100 %)
1 diff
(99.8 %id)
AL709454 human skeletal muscle .c 209 to 444 109 to 344       236/344
(68 %)
6 diff
(98.3 %id)
DA559128   .c 300 to 848 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA852265 placenta .c 384 to 944 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA988256 synovial membrane tissue from rheumatioidarthritis .c 387 to 951 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB227499 trachea .c 660 to 1194 2 to 536   capped   535/544
(98 %)
0 diff
(100 %id)
BQ369177 placenta_normal .c 1111 to 1555 19 to 463       449/463
(96 %)
10 diff
(97.9 %id)
DA554794   .c 1284 to 1820 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DN996187 breast cancer, Mammary gland (cancer tissue) .c 1299 to 1865 3 to 569       567/569
(99 %)
6 diff
(99.0 %id)
DA550560   .c 1305 to 1784 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
BE142443 head_neck .c 1430 to 1555 126 to 1     Submitted on the opposite strand 126/129
(97 %)
3 diff
(97.7 %id)
BF822240 kidney_tumor .c 1485 to 1696 212 to 3     Submitted on the opposite strand 210/214
(98 %)
1 diff
(99.6 %id)
DA577124   .c 2045 to 2626 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DR422893 eye, Pterygium .c 2076 to 2696 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
BF933302 nervous_tumor .c 2152 to 2553 1 to 402       402/412
(97 %)
2 diff
(99.6 %id)
AL117664 uterus .c 2224 to 4496 9 to 2281   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2273/2281
(99 %)
7 diff
(99.7 %id)
DA601051   .c 2250 to 2822 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BP332429 renal proximal tubule .c 2288 to 2857 1 to 570       570/573
(99 %)
2 diff
(99.7 %id)
BQ008643 Chondrosarcoma, Left Pubic Bone .c 2361 to 3035 686 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 676/686
(98 %)
4 diff
(99.5 %id)
ES311550 frontal balding hair, skin .c 2363 to 2463 1 to 98       98/98
(100 %)
3 diff
(97.0 %id)
TI_1948149891   .c 2392 to 3337 1069 to 127       941/1252
(75 %)
27 diff
(97.9 %id)
DA600939   .c 2406 to 2964 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA662780   .c 2431 to 2960 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
TI_1948150190   .c 2435 to 3337 1034 to 131       904/1275
(70 %)
10 diff
(99.3 %id)
TI_1948150506   .c 2435 to 3337 1031 to 129       901/1263
(71 %)
8 diff
(99.4 %id)
TI_1948150507   .c 2435 to 3337 1047 to 137       909/1273
(71 %)
24 diff
(98.2 %id)
TI_1948150189   .c 2440 to 3337 1025 to 125       899/1279
(70 %)
12 diff
(99.1 %id)
BP293833 lung .c 2502 to 3076 1 to 576       576/576
(100 %)
10 diff
(98.3 %id)
BP294010 lung .c 2502 to 3084 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
TI_1948149604   .c 2503 to 3337 989 to 140       850/1357
(62 %)
21 diff
(98.5 %id)
DA596681   .c 2506 to 3053 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_1948149603   .c 2507 to 3337 966 to 128       839/1355
(61 %)
13 diff
(99.1 %id)
TI_1948149892   .c 2554 to 3337 924 to 136       789/1428
(55 %)
16 diff
(98.9 %id)
BG779990 adenocarcinoma, Prostate .c 2603 to 3335 1 to 738       738/738
(100 %)
10 diff
(98.7 %id)
BI771238 pooled lung and spleen .c 2609 to 3224 1 to 632       575/861
(66 %)
16 diff
(98.2 %id)
TI_57182683   .c 2609 to 3224 32 to 663       598/892
(67 %)
26 diff
(97.1 %id)
BF592382 breast, lobullar carcinoma in situ .c 2622 to 2879 22 to 278     Submitted on the opposite strand 257/307
(83 %)
9 diff
(97.1 %id)
EB387564 eye, optic nerve .c 2791 to 3644 1 to 854       854/854
(100 %)
2 diff
(99.8 %id)
AL162038 testis .c 2814 to 4496 1 to 1686   available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1686/1686
(100 %)
6 diff
(99.7 %id)
BP325873 prostata .c 2826 to 3395 9 to 580       574/580
(98 %)
9 diff
(98.5 %id)
BG530056 embryonal carcinoma, testis .c 2829 to 3554 1 to 735       735/741
(99 %)
48 diff
(93.6 %id)
AA343597 gall bladder .c 2849 to 3134 10 to 296       287/299
(95 %)
12 diff
(96.0 %id)
AA304549 aorta .c 2888 to 3100 1 to 213       213/213
(100 %)
0 diff
(100 %id)
AI123952 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2897 to 3373 477 to 1       477/477
(100 %)
0 diff
(100 %id)
BE166246 head_neck .c 2972 to 3575 614 to 13     Submitted on the opposite strand 602/614
(98 %)
6 diff
(99.1 %id)
AI751915 Bone, Hip .c 2978 to 3400 9 to 431       423/431
(98 %)
6 diff
(98.7 %id)
BP378811 uterus .c 3058 to 3637 1 to 580       580/580
(100 %)
14 diff
(97.6 %id)
BX335864 Placenta Cot 25-normalized .c 3096 to 4294 1197 to 1       1197/1201
(99 %)
11 diff
(99.1 %id)
TI_57181210   .c 3099 to 4004 30 to 935       907/937
(96 %)
48 diff
(94.9 %id)
BI767498 pooled lung and spleen .c 3104 to 4004 1 to 901       901/903
(99 %)
43 diff
(95.3 %id)
EL948932 eyeball .c 3169 to 3753 1 to 585       585/585
(100 %)
5 diff
(99.2 %id)
W79144 heart .c 3172 to 3576 1 to 417       417/417
(100 %)
14 diff
(96.7 %id)
W78050 heart .c 4064 to 4498 444 to 3       442/446
(99 %)
0 diff
(100 %id)
DA597162   .d 1 to 549 8 to 556   tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
DB319901   .d 1592 to 2103 512 to 1   tiling clone,   512/512
(100 %)
0 diff
(100 %id)
BX417183 placenta .d 2048 to 3044 1 to 995   tiling clone,   995/1011
(98 %)
16 diff
(98.5 %id)
AL833204 lymph node .e 1 to 3714 1 to 3714 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3714/3715
(99 %)
2 diff
(100.0 %id)
BP337567 coronary artery .e 895 to 1360 1 to 469       469/477
(98 %)
8 diff
(98.4 %id)
BP336746 coronary artery .e 911 to 1498 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
DA550507   .e 1172 to 1735 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BM888508 eye .e 1302 to 1858 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DA018465   .e 1389 to 1935 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AI032560 liver and spleen .e 2007 to 2447 452 to 12       441/452
(97 %)
3 diff
(99.4 %id)
AI040579 liver and spleen .e 2082 to 2447 377 to 12       366/377
(97 %)
0 diff
(100 %id)
AI040370 liver and spleen .e 2104 to 2447 355 to 12       344/355
(96 %)
0 diff
(100 %id)
AA702902 liver and spleen .e 2108 to 2438 331 to 1       331/331
(100 %)
1 diff
(99.7 %id)
AL701598 human skeletal muscle .e 2506 to 3025 1 to 520       520/520
(100 %)
4 diff
(99.3 %id)
BP380959   .f 1 to 755 1 to 758   tiling clone,   758/1011
(74 %)
15 diff
(98.6 %id)
BP380727   .f 2 to 444 1 to 446   tiling clone,   446/566
(78 %)
10 diff
(98.3 %id)
BX369925 Placenta Cot 25-normalized .f 710 to 1619 1 to 910   tiling clone,   870/914
(95 %)
27 diff
(97.1 %id)
DA664256   .f 1424 to 1985 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
BF991456 placenta_normal .f 1712 to 2017 308 to 7       302/309
(97 %)
3 diff
(99.1 %id)
DA991465 synovial membrane tissue from rheumatioidarthritis .f 1876 to 2423 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
AK123737   .g 1 to 2453 2 to 2454 E128G tiling clone, available from FLJ,   2454/2454
(100 %)
3 diff
(99.9 %id)
DA600392   .g 1 to 569 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
AK093861 trachea .g 768 to 3571 1 to 2809   tiling clone, available from FLJ,   2809/2809
(100 %)
5 diff
(99.9 %id)
AX748342   .g 768 to 3571 1 to 2809       2809/2809
(100 %)
5 diff
(99.9 %id)
DB198120 trachea .g 769 to 1352 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA165527 amygdala .g 848 to 1440 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DB319950   .g 1910 to 2453 544 to 1       544/544
(100 %)
0 diff
(100 %id)
DB348205 trachea .g 3025 to 3571 552 to 1   tiling clone,   552/552
(100 %)
4 diff
(99.3 %id)
AK123748   .h 1 to 2242 2 to 2243 Q83L tiling clone, available from FLJ,   2243/2243
(100 %)
2 diff
(100.0 %id)
DA602894   .i 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
AL598441   .i 1533 to 2352 1 to 822   tiling clone,   822/823
(99 %)
5 diff
(99.4 %id)
DB319982   .i 1609 to 2139 531 to 1       531/531
(100 %)
1 diff
(99.9 %id)
AB056106 placenta .j 1 to 2981 1 to 2981 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2981/2981
(100 %)
1 diff
(100.0 %id)
DA523067 brain .j 277 to 841 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA382487 thalamus .j 361 to 855 40 to 534   capped   495/533
(92 %)
6 diff
(98.9 %id)
BX431396 placenta .j 429 to 1203 10 to 784       775/853
(90 %)
32 diff
(96.3 %id)
BP258490 heart .j 442 to 1003 1 to 563       563/563
(100 %)
11 diff
(98.1 %id)
AU280309   .j 442 to 1012 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BF352860 head_neck .k 1 to 632 630 to 1   tiling clone,   630/632
(99 %)
3 diff
(99.6 %id)
BF352910 head_neck .k 174 to 632 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
CA390839 eye, RPE/choroid .k 284 to 983 1 to 700   tiling clone,   700/700
(100 %)
0 diff
(100 %id)
CD674023 eye, lens .k 296 to 862 1 to 567     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 567/567
(100 %)
0 diff
(100 %id)
CD674022 eye, lens .k 2224 to 2905 698 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 682/682
(100 %)
0 diff
(100 %id)
DB278198 uterus .l 1 to 540 2 to 541   tiling clone, capped   540/540
(100 %)
1 diff
(99.9 %id)
DA553224   .l 453 to 1014 2 to 564   tiling clone, to resequence, capped   563/563
(100 %)
2 diff
(99.7 %id)
DB318414   .l 1679 to 2251 573 to 1   tiling clone, to resequence,   573/573
(100 %)
2 diff
(99.7 %id)
DB061203 testis .m 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DB448766 testis .m 14 to 452 1 to 439       439/439
(100 %)
6 diff
(98.7 %id)
BG718865 testis .m 16 to 766 8 to 771       762/840
(90 %)
39 diff
(95.4 %id)
BI459909 testis .m 16 to 650 8 to 648   tiling clone,   638/649
(98 %)
24 diff
(96.4 %id)
DB082996 testis .m 432 to 992 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BG541576 lung .m 758 to 1456 697 to 2   tiling clone, Submitted on the opposite strand 696/698
(99 %)
7 diff
(99.0 %id)
DA599093   .m 1374 to 1890 2 to 518   tiling clone, capped   517/517
(100 %)
1 diff
(99.9 %id)
AK025204 colon .n 1 to 3530 1 to 3529 F370S tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3529/3529
(100 %)
3 diff
(100.0 %id)
BQ014316 Chondrosarcoma, Left Pubic Bone .o 1 to 564 589 to 16   tiling clone,   569/621
(91 %)
1 diff
(99.9 %id)
DA598827   .o 377 to 945 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DB281808 uterus .p 1 to 545 2 to 547   tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
BF196662 brain, glioblastoma (pooled) .p 209 to 735 525 to 1       525/525
(100 %)
1 diff
(99.9 %id)
DB141605 thymus .p 270 to 765 2 to 499   capped   498/498
(100 %)
2 diff
(99.6 %id)
AI150884 brain, glioblastoma (pooled) .p 281 to 735 453 to 1       453/453
(100 %)
2 diff
(99.6 %id)
DA252872 caudate nucleus .p 309 to 794 2 to 487   tiling clone, capped   486/486
(100 %)
0 diff
(100 %id)
AI199019 anaplastic oligodendroglioma, brain .p 395 to 735 341 to 1       341/341
(100 %)
1 diff
(99.8 %id)
BP231369 muscle .q 1 to 579 4 to 582 M29V tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AW862154 colon .r 1 to 491 496 to 4 I9M E17G T18D T19H L20T ... tiling clone,   493/498
(98 %)
10 diff
(98.0 %id)
BY796689 eye .s 1 to 488 1 to 488 exact tiling clone,   490/490
(100 %)
0 diff
(100 %id)
BX476658   .t 1 to 618 1 to 618 S12P T13Q V14* tiling clone,   618/618
(100 %)
2 diff
(99.7 %id)
BX476672   .t 1 to 615 1 to 615 S12P T13Q V14*     615/615
(100 %)
3 diff
(99.6 %id)
DA549926   .u 1 to 585 2 to 587 I15N tiling clone, capped   586/588
(99 %)
3 diff
(99.5 %id)
BG995465 head_neck .va 1 to 268 279 to 12 exact tiling clone,   268/300
(89 %)
5 diff
(98.4 %id)
CK299045 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .vb 1 to 247 19 to 265 exact tiling clone, Submitted on the opposite strand 247/262
(94 %)
1 diff
(99.7 %id)
CA392647 eye, RPE/choroid .vc 1 to 385 4 to 389 I14N P15T T16I Q17T Q18C ... tiling clone,   389/389
(100 %)
22 diff
(94.4 %id)
BU656818 blood .vc 72 to 563 9 to 499   tiling clone,   491/499
(98 %)
6 diff
(98.8 %id)
BU656977 blood .vc 72 to 609 10 to 546   tiling clone,   537/546
(98 %)
6 diff
(99.0 %id)
BX345305 Placenta Cot 25-normalized .vd-u 1 to 1156 1 to 1144       1144/1144
(100 %)
17 diff
(98.6 %id)
BX385808 Placenta Cot 25-normalized .vd-u 1 to 998 1 to 984   tiling clone,   984/1044
(94 %)
22 diff
(97.9 %id)
BX345304 Placenta Cot 25-normalized .vd-u 732 to 1712 977 to 1 K16P N17P N20D W22R S42P tiling clone,   977/1051
(92 %)
77 diff
(92.7 %id)
DA992823 synovial membrane tissue from rheumatioidarthritis .ve 1 to 575 2 to 579   tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DA597823   .vf 1 to 557 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BP345070 synovial membrane .vg 1 to 547 1 to 547 T2G tiling clone,   550/550
(100 %)
5 diff
(99.1 %id)
AL603605 human skeletal muscle .vh-u 1 to 527 1 to 531 I7L tiling clone,   531/531
(100 %)
6 diff
(98.9 %id)
AW515723 pooled germ cell tumors .vi-u 1 to 482 482 to 1 exact tiling clone,   482/482
(100 %)
2 diff
(99.6 %id)
AA779815   .vj-u 1 to 423 422 to 1 exact tiling clone,   422/422
(100 %)
2 diff
(99.6 %id)
AI374634   .vj-u 148 to 422 276 to 1   tiling clone,   276/276
(100 %)
1 diff
(99.7 %id)
BM172296 testis Gene ABI3BP, variant not shown         This clone was ignored    
DA989818 synovial membrane tissue from rheumatioidarthritis Gene ABI3BP, variant not shown       capped This clone was ignored    
DB334959 synovial membrane tissue from rheumatioidarthritis Gene ABI3BP, variant not shown         This clone was ignored    
BM714164 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene ABI3BP, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd-u, .ve, .vf, .vg, .vh-u, .vi-u, .vj-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI