To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene TARDBPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
327 representative clones for gene TARDBP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC404209 testis .a 54 to 655 1 to 602   tiling clone,   602/602
(100 %)
3 diff
(99.6 %id)
NM_007375.3   .a 278 to 4493 1 to 4216 exact RefSeq, AAA   4216/4216
(100 %)
0 diff
(100 %id)
DB041955 testis .a 299 to 871 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA791303 brain .a 305 to 936 2 to 633   capped   632/632
(100 %)
0 diff
(100 %id)
AK312416 brain .a 310 to 1656 1 to 1347 G278V     1347/1347
(100 %)
1 diff
(100.0 %id)
AU118831.
matches multiple genes
whole embryo, mainly head .a 310 to 1161 2 to 855   capped also hits gene gukley 854/854
(100 %)
4 diff
(99.6 %id)
BJ996356 hepatoblastoma .a 310 to 721 1 to 412       412/412
(100 %)
0 diff
(100 %id)
DA746940   .a 310 to 879 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB162037 thymus .a 310 to 899 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BP377163 uterus .a 310 to 896 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA109084 cerebellum .a 311 to 901 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA160415 amygdala .a 311 to 894 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA166782 amygdala .a 311 to 882 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA234844 brain .a 311 to 898 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA241945 brain .a 311 to 883 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA300187 hippocampus .a 311 to 890 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA314315 hippocampus .a 311 to 889 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA334436 hippocampus .a 311 to 899 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA378792 thalamus .a 311 to 941 2 to 632   capped   631/631
(100 %)
0 diff
(100 %id)
DA440495 tongue, tumor tissue .a 311 to 909 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA477570   .a 311 to 893 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA483003 brain .a 311 to 1098 2 to 793   capped   792/794
(99 %)
8 diff
(99.0 %id)
DA503190 brain .a 311 to 880 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA509092 brain .a 311 to 896 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA530536 brain .a 311 to 923 2 to 614   capped   613/613
(100 %)
0 diff
(100 %id)
DA531213 brain .a 311 to 925 2 to 616   capped   615/615
(100 %)
1 diff
(99.9 %id)
DA536538 heart .a 311 to 908 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA548794   .a 311 to 887 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA583659 lung .a 311 to 901 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA643047 Liver .a 311 to 910 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA644086   .a 311 to 884 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA644280   .a 311 to 881 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA645283   .a 311 to 903 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA661667   .a 311 to 882 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA752949   .a 311 to 883 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA768123 brain .a 311 to 888 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA779758 brain .a 311 to 880 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA782857 brain .a 311 to 901 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA795082 brain .a 311 to 883 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA814816   .a 311 to 886 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA817126   .a 311 to 893 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA817786   .a 311 to 882 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA864611 placenta .a 311 to 912 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA909212   .a 311 to 882 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA913564   .a 311 to 889 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA918852 small intestine .a 311 to 882 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA926649 small intestine .a 311 to 892 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB031038 testis .a 311 to 898 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB108895 thymus .a 311 to 888 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB126998 thymus .a 311 to 944 2 to 635   capped   634/634
(100 %)
0 diff
(100 %id)
DB200436 trachea .a 311 to 884 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB222813 trachea .a 311 to 899 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB257714 uterus .a 311 to 892 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB258786 uterus .a 311 to 883 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB265946 uterus .a 311 to 888 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB290719 uterus .a 311 to 903 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA332376 hippocampus .a 312 to 908 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA782426 brain .a 313 to 900 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA205469 brain .a 314 to 902 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA390579 thalamus .a 314 to 892 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
CV810842 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 315 to 1113 17 to 819       803/874
(91 %)
19 diff
(97.9 %id)
DA165993 amygdala .a 316 to 885 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA193173 amygdala .a 316 to 915 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA309576 hippocampus .a 316 to 906 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA384465 thalamus .a 316 to 949 2 to 635   capped   634/634
(100 %)
0 diff
(100 %id)
DA690426   .a 316 to 891 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB238737 trachea .a 316 to 900 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA441372 tongue, tumor tissue .a 318 to 899 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA336937 hippocampus .a 319 to 889 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CD624137   .a 319 to 1018 699 to 5       697/706
(98 %)
3 diff
(99.6 %id)
BM463573 leiomyosarcoma, uterus .a 320 to 1197 1 to 877       877/1044
(84 %)
15 diff
(98.6 %id)
DR156481 human embryonic stem cells differentiated toan early endodermal cell type .a 320 to 1052 1 to 733       733/733
(100 %)
0 diff
(100 %id)
BQ224751 embryonal carcinoma, cell line, testis .a 321 to 1185 1 to 866       866/866
(100 %)
4 diff
(99.6 %id)
DB242265 stomach, tumor tissue .a 321 to 900 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
CN356028 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 322 to 960 1 to 639       639/639
(100 %)
0 diff
(100 %id)
CX787399 human embryonic stem cells .a 322 to 1041 1 to 720       720/720
(100 %)
1 diff
(99.9 %id)
CD624143   .a 323 to 1018 697 to 5       693/704
(98 %)
1 diff
(99.9 %id)
AL050265 brain .a 324 to 3039 1 to 2716 exact available from DKFZ, AAA   2716/2716
(100 %)
6 diff
(99.8 %id)
BM468014 leiomyosarcoma, uterus .a 324 to 1390 1 to 1067       1067/1110
(96 %)
34 diff
(97.0 %id)
BC001487 Kidney, renal cell adenocarcinoma .a 325 to 3039 1 to 2715 E261* available from MGC, AAA   2715/2715
(100 %)
1 diff
(100.0 %id)
BQ942175 large cell carcinoma, lung .a 325 to 1253 1 to 931       931/932
(99 %)
8 diff
(99.2 %id)
BC095435 testis .a 326 to 3039 1 to 2714 exact AAA   2714/2714
(100 %)
0 diff
(100 %id)
CN355996 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 326 to 1043 1 to 720       720/720
(100 %)
2 diff
(99.8 %id)
AA227003 brain, neuroepithelial cells .a 326 to 636 1 to 312       312/312
(100 %)
7 diff
(97.8 %id)
BU159840 eye, retinoblastoma .a 326 to 1179 1 to 854       854/928
(92 %)
8 diff
(99.2 %id)
BQ722271 sympathetic trunk .a 326 to 1208 1 to 899       836/899
(92 %)
21 diff
(97.7 %id)
BU521437 leiomyosarcoma, uterus .a 326 to 1122 1 to 799       799/914
(87 %)
6 diff
(99.4 %id)
CV575656 cornea, eye .a 326 to 944 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BC071657 Lymph, lymphoma .a 327 to 3045 1 to 2719 exact tiling clone, available from MGC, AAA   2719/2821
(96 %)
1 diff
(100.0 %id)
CX782809 human embryonic stem cells .a 327 to 635 1 to 309       309/309
(100 %)
0 diff
(100 %id)
BM150172 leukopheresis .a 328 to 618 1 to 291       291/291
(100 %)
19 diff
(93.5 %id)
BM194620 leukopheresis .a 328 to 743 1 to 415       415/416
(99 %)
8 diff
(98.1 %id)
BU517316 leiomyosarcoma, uterus .a 329 to 1192 1 to 868       868/871
(99 %)
9 diff
(99.0 %id)
BU845531 ovary, teratocarcinoma, cell line .a 329 to 1244 1 to 922       922/936
(98 %)
11 diff
(98.9 %id)
CN356026 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 331 to 994 1 to 664       664/664
(100 %)
0 diff
(100 %id)
BX447691 T cells (Jurkat cell line) .a 332 to 1406 1 to 1063       1063/1076
(98 %)
32 diff
(97.1 %id)
BX457662 neuroblastoma .a 333 to 1382 1 to 1043       1043/1053
(99 %)
11 diff
(99.0 %id)
BX417865 placenta .a 333 to 1202 1 to 870       870/870
(100 %)
0 diff
(100 %id)
BQ049674 lymph, lymphoma, cell line .a 333 to 1239 1 to 917       917/997
(91 %)
19 diff
(98.1 %id)
BQ690953 ductal carcinoma, cell line, Pancreas .a 335 to 1125 1 to 794       794/898
(88 %)
4 diff
(99.6 %id)
BU845664 ovary, teratocarcinoma, cell line .a 337 to 1207 1 to 877       877/932
(94 %)
19 diff
(98.0 %id)
CX762417 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 337 to 1123 1 to 783     Submitted on the opposite strand 783/784
(99 %)
7 diff
(99.2 %id)
AA580830 bulk germ cell seminoma .a 338 to 645 1 to 309       309/309
(100 %)
1 diff
(99.7 %id)
AA130324 colon, tumor .a 339 to 746 1 to 408       408/408
(100 %)
0 diff
(100 %id)
AK222754 Liver .a 340 to 2067 1 to 1728 E200G     1728/1728
(100 %)
3 diff
(99.9 %id)
BP237387 Liver .a 340 to 966 1 to 627       627/627
(100 %)
0 diff
(100 %id)
DA022538   .a 341 to 912 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BX461118 brain, fetal brain .a 343 to 1296 1 to 942       942/949
(99 %)
22 diff
(97.7 %id)
CD624139   .a 344 to 1018 674 to 4       671/674
(99 %)
2 diff
(99.8 %id)
BU183051 melanotic melanoma, skin .a 346 to 1171 1 to 832       832/833
(99 %)
10 diff
(98.8 %id)
CD359197 testis .a 355 to 1209 1 to 864       864/869
(99 %)
17 diff
(98.1 %id)
CD624133   .a 356 to 1066 716 to 13       704/716
(98 %)
9 diff
(98.8 %id)
AU127433   .a 403 to 1005 2 to 604   capped   603/606
(99 %)
1 diff
(99.9 %id)
CR533534   .a 412 to 1679 1 to 1268 exact     1268/1268
(100 %)
0 diff
(100 %id)
CV027648 mixed .a 412 to 1021 1 to 610       610/610
(100 %)
0 diff
(100 %id)
EF434181   .a 412 to 1653 1 to 1242       1242/1251
(99 %)
1 diff
(100.0 %id)
EF434182   .a 412 to 1656 1 to 1245 exact     1245/1245
(100 %)
0 diff
(100 %id)
EL736985 mixed .a 412 to 1034 1 to 623       623/623
(100 %)
0 diff
(100 %id)
U23731   .a 412 to 1656 1 to 1245 exact     1245/1245
(100 %)
0 diff
(100 %id)
CD624135   .a 444 to 1018 578 to 5       574/585
(98 %)
0 diff
(100 %id)
BE717390 head_neck .a 484 to 954 520 to 50       471/520
(90 %)
6 diff
(98.9 %id)
CD624141   .a 533 to 1018 487 to 5       483/487
(99 %)
1 diff
(99.8 %id)
BQ945505 carcinoma, cell line, Prostate .a 534 to 1425 1 to 892       892/895
(99 %)
9 diff
(99.0 %id)
BU541296 carcinoma, cell line, Prostate .a 534 to 1410 1 to 883       883/884
(99 %)
13 diff
(98.6 %id)
BU552536 carcinoma, cell line, Prostate .a 534 to 1445 1 to 918       918/920
(99 %)
13 diff
(98.6 %id)
DA153016 amygdala .a 577 to 1166 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BQ130298 insulinoma, Pancreas .a 600 to 1176 8 to 584       577/584
(98 %)
9 diff
(98.5 %id)
DA630976 Kidney .a 723 to 1297 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA485984 brain .a 727 to 1297 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CN356006 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 866 to 1568 1 to 703       703/705
(99 %)
1 diff
(99.9 %id)
AL555909 placenta .a 875 to 1812 1 to 938       938/938
(100 %)
0 diff
(100 %id)
CN356014 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 877 to 1549 1 to 673       673/673
(100 %)
0 diff
(100 %id)
DA783624 brain .a 923 to 1497 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CU444595 epidermis .a 926 to 1408 491 to 8     Submitted on the opposite strand 484/500
(96 %)
1 diff
(99.8 %id)
BU619075 Cell Line, Chondrosarcoma .a 1008 to 1756 765 to 18   AAA   748/748
(100 %)
1 diff
(99.9 %id)
BQ689284 ductal carcinoma, cell line, Pancreas .a 1026 to 1826 1 to 805       805/924
(87 %)
20 diff
(97.9 %id)
BF801344 colon_ins .a 1054 to 1330 290 to 14     Submitted on the opposite strand 277/290
(95 %)
0 diff
(100 %id)
BM765019 Ascites, stomach .a 1067 to 1653 1 to 587       587/587
(100 %)
0 diff
(100 %id)
CX756784 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1113 to 1823 1 to 711     Submitted on the opposite strand 711/713
(99 %)
3 diff
(99.6 %id)
BE782716 eye, retinoblastoma .a 1141 to 1775 1 to 634       634/965
(65 %)
5 diff
(99.5 %id)
BU675715 lung, Primary Lung Epithelial Cells .a 1153 to 1682 14 to 543     Submitted on the opposite strand 530/543
(97 %)
0 diff
(100 %id)
BQ229966 large cell carcinoma, lung .a 1155 to 2003 1 to 857       857/894
(95 %)
15 diff
(98.4 %id)
AI908887 breast .a 1195 to 1664 492 to 22       471/515
(91 %)
7 diff
(98.7 %id)
CD359990 testis .a 1243 to 1962 1 to 723       723/924
(78 %)
5 diff
(99.5 %id)
AW605519.
matches multiple genes
denis_drash .a 1268 to 1609 352 to 5   tiling clone, also hits gene karweyby 348/352
(98 %)
0 diff
(100 %id)
AW605540 denis_drash .a 1268 to 1646 380 to 4       377/380
(99 %)
0 diff
(100 %id)
DB014658 esophageal, tumor tissue .a 1283 to 1857 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
W26804 eye, retina .a 1292 to 1692 427 to 24       404/492
(82 %)
0 diff
(100 %id)
AI908931 breast .a 1327 to 1678 353 to 1       353/354
(99 %)
9 diff
(97.5 %id)
BQ649067 hepatocellular carcinoma, cell line, Liver .a 1337 to 2115 1 to 784       784/948
(82 %)
13 diff
(98.7 %id)
BF379179 uterus_tumor .a 1344 to 1664 328 to 6       323/328
(98 %)
0 diff
(100 %id)
DB203244 trachea .a 1357 to 1942 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BY996708   .a 1376 to 2012 1 to 637       637/637
(100 %)
0 diff
(100 %id)
F06229 brain, total brain .a 1481 to 1748 1 to 268       268/268
(100 %)
0 diff
(100 %id)
BG288568 bladder, transitional cell papilloma, cell line .a 1496 to 2231 1 to 733       733/815
(89 %)
12 diff
(98.6 %id)
BM799724 eye, retinoblastoma .a 1572 to 2563 1 to 1004       1004/1107
(90 %)
33 diff
(97.1 %id)
BF849252 lung_normal .a 1652 to 2109 466 to 11     Submitted on the opposite strand 456/466
(97 %)
0 diff
(100 %id)
BP360056 thalamus .a 1737 to 2318 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU070046 insulinoma, Pancreas .a 1742 to 2259 1 to 518       518/518
(100 %)
3 diff
(99.5 %id)
BF332135 breast .a 1755 to 2265 513 to 2       512/514
(99 %)
0 diff
(100 %id)
BE122752 skin .a 1885 to 2163 279 to 1     Submitted on the opposite strand 279/520
(53 %)
3 diff
(99.5 %id)
BE122751 skin .a 1885 to 2163 279 to 1     Submitted on the opposite strand 279/556
(50 %)
3 diff
(99.5 %id)
AW387717 stomach .a 1919 to 2107 190 to 1       190/190
(100 %)
7 diff
(96.4 %id)
BX426441 T cells (Jurkat cell line) .a 1991 to 3032 1040 to 1       1040/1040
(100 %)
8 diff
(99.3 %id)
AL578288 placenta .a 2056 to 3029 975 to 1       975/975
(100 %)
2 diff
(99.8 %id)
BF762103 colon_est .a 2058 to 2314 253 to 1     Submitted on the opposite strand 253/253
(100 %)
9 diff
(96.5 %id)
TI_227715240   .a 2129 to 3043 996 to 103   AAA   894/976
(91 %)
24 diff
(97.6 %id)
BQ331880 lung_tumor .a 2153 to 2752 622 to 25       598/623
(95 %)
0 diff
(100 %id)
BX455403 brain, fetal brain .a 2175 to 2980 818 to 1       818/818
(100 %)
31 diff
(96.3 %id)
BQ064518 lymph, lymphoma, cell line .a 2202 to 3043 1 to 848   AAA   848/848
(100 %)
9 diff
(99.0 %id)
BQ645508 hepatocellular carcinoma, cell line, Liver .a 2202 to 2975 1 to 773       773/935
(82 %)
10 diff
(99.0 %id)
BQ331883 lung_tumor .a 2210 to 2755 549 to 4       546/550
(99 %)
0 diff
(100 %id)
BE901760 choriocarcinoma, placenta .a 2220 to 2965 1 to 741       741/897
(82 %)
15 diff
(98.4 %id)
TI_154105522   .a 2221 to 3043 896 to 83   AAA   814/936
(86 %)
15 diff
(98.4 %id)
BQ332520 lung_tumor .a 2222 to 2751 555 to 26       530/555
(95 %)
0 diff
(100 %id)
TI_149270899   .a 2237 to 3046 888 to 85   AAA   804/992
(81 %)
15 diff
(98.5 %id)
TI_149291337   .a 2237 to 3043 883 to 83   AAA   801/936
(85 %)
9 diff
(99.1 %id)
FN088519 breast carcinoma .a 2256 to 2323 68 to 1     Submitted on the opposite strand 68/68
(100 %)
2 diff
(97.1 %id)
TI_154107182   .a 2264 to 3043 878 to 98   AAA   781/1002
(77 %)
21 diff
(98.0 %id)
TI_149298856   .a 2293 to 3043 840 to 90   AAA   751/967
(77 %)
1 diff
(99.9 %id)
BM973889 lung .a 2297 to 3043 760 to 15   AAA   746/746
(100 %)
2 diff
(99.8 %id)
CA446688 Chondrosarcoma, Left Pubic Bone .a 2298 to 3043 759 to 15   AAA   745/746
(99 %)
3 diff
(99.6 %id)
BQ182463 Knee, Osteoarthritic Cartilage .a 2299 to 3043 758 to 15   AAA   744/744
(100 %)
1 diff
(99.9 %id)
BQ771730 Chondrosarcoma Grade II, Left Pelvis .a 2299 to 3043 760 to 19   AAA   742/742
(100 %)
5 diff
(99.4 %id)
CA420100 Bone, Human Chondrosarcoma Cell Line .a 2299 to 3043 759 to 15   AAA   745/745
(100 %)
2 diff
(99.8 %id)
BU684769 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2300 to 3043 758 to 15   AAA   744/744
(100 %)
0 diff
(100 %id)
BM841839 lymph node, stomach .a 2302 to 2900 1 to 599       599/599
(100 %)
0 diff
(100 %id)
CX782727 human embryonic stem cells .a 2335 to 3043 736 to 27   AAA   710/710
(100 %)
1 diff
(99.9 %id)
TI_149296390   .a 2346 to 3043 764 to 80   AAA   685/875
(78 %)
14 diff
(98.4 %id)
CA310147 Alveolar Macrophage, lung .a 2350 to 3043 708 to 15   AAA   694/694
(100 %)
0 diff
(100 %id)
BI492726.
matches multiple genes
cochlea, ear .a 2368 to 3046 697 to 19   AAA also hits gene SPTBN1 679/679
(100 %)
0 diff
(100 %id)
BQ359205 head_normal .a 2376 to 2722 348 to 1       348/348
(100 %)
17 diff
(95.2 %id)
CX164540 human embryonic stem cells differentiated toan early endodermal cell type .a 2378 to 3224 1 to 847       847/847
(100 %)
0 diff
(100 %id)
DB126305 thymus .a 2388 to 2962 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CA429367 Cell Line, Chondrosarcoma .a 2388 to 3043 671 to 15   AAA   657/657
(100 %)
1 diff
(99.9 %id)
BQ951654 epidermoid carcinoma, cell line, lung .a 2394 to 3039 1 to 646   AAA   646/646
(100 %)
0 diff
(100 %id)
BU627284 Bone, Enchondroma cell line .a 2400 to 3043 662 to 19   AAA   644/644
(100 %)
1 diff
(99.9 %id)
BQ774597 Bone, Human Chondrosarcoma Cell Line .a 2400 to 3043 658 to 15   AAA   644/644
(100 %)
1 diff
(99.9 %id)
CD365721 Alveolar Macrophage, lung .a 2400 to 3043 662 to 19   AAA   644/644
(100 %)
0 diff
(100 %id)
BE439774 Trabecular meshwork .a 2412 to 3039 649 to 29   AAA   621/621
(100 %)
7 diff
(98.9 %id)
BQ130046 insulinoma, Pancreas .a 2424 to 3043 638 to 19   AAA   620/620
(100 %)
0 diff
(100 %id)
BQ016375 lung, Metastatic Chondrosarcoma .a 2433 to 3043 625 to 15   AAA   611/611
(100 %)
0 diff
(100 %id)
CA312218 Human Lung Epithelial cells, lung .a 2439 to 3043 619 to 15   AAA   605/605
(100 %)
0 diff
(100 %id)
BF449066 Prostate .a 2441 to 3043 603 to 1       603/603
(100 %)
0 diff
(100 %id)
BU069815 insulinoma, Pancreas .a 2441 to 3043 619 to 17   AAA   603/603
(100 %)
0 diff
(100 %id)
BQ446424 Knee, Osteoarthritic Cartilage .a 2441 to 3046 621 to 16   AAA   606/606
(100 %)
0 diff
(100 %id)
AI935691 Kidney .a 2442 to 3043 602 to 1       602/602
(100 %)
0 diff
(100 %id)
BM996696 lung, Metastatic Chondrosarcoma .a 2442 to 3043 616 to 15   AAA   602/602
(100 %)
0 diff
(100 %id)
BU674061 lung, Primary Lung Epithelial Cells .a 2442 to 3046 620 to 16   AAA   605/605
(100 %)
0 diff
(100 %id)
BM091399 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 2445 to 3042 598 to 1       598/598
(100 %)
0 diff
(100 %id)
DA507146 brain .a 2447 to 3020 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
TI_149282115   .a 2447 to 3043 658 to 62   AAA   597/1157
(51 %)
4 diff
(99.7 %id)
BU629121 cell lines, Chondrosarcoma .a 2449 to 3043 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
BU631375 cell lines, Chondrosarcoma .a 2449 to 3043 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
BM983673 lung, Primary Lung Epithelial Cells .a 2452 to 3043 606 to 15   AAA   592/596
(99 %)
1 diff
(99.9 %id)
AA125745 uterus .a 2491 to 2796 1 to 308   fully sequenced,   308/308
(100 %)
1 diff
(99.7 %id)
BJ996357 hepatoblastoma .a 2496 to 3009 514 to 1       514/514
(100 %)
0 diff
(100 %id)
FN104925 breast carcinoma .a 2527 to 2612 95 to 10     Submitted on the opposite strand 86/95
(90 %)
0 diff
(100 %id)
BQ354472 head_neck .a 2542 to 2945 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AW999316 breast_normal .a 2549 to 2670 14 to 139       126/139
(90 %)
9 diff
(93.6 %id)
BE710929 head_neck .a 2552 to 2735 187 to 4       184/187
(98 %)
0 diff
(100 %id)
BQ331657 lung_tumor .a 2561 to 2771 230 to 18       213/234
(91 %)
0 diff
(100 %id)
BQ353132.
matches multiple genes
head_neck .a 2567 to 2789 229 to 2     also hits gene LOC643387 228/231
(98 %)
0 diff
(100 %id)
BE707833 head_neck .a 2579 to 2727 24 to 174       151/174
(86 %)
6 diff
(96.6 %id)
N94103 liver and spleen .a 2600 to 3044 448 to 1     Submitted on the opposite strand 448/448
(100 %)
5 diff
(98.9 %id)
AA130325 colon, tumor .a 2603 to 3043 443 to 2       442/443
(99 %)
0 diff
(100 %id)
AA688174 germinal center B cell .a 2631 to 2861 231 to 1       231/231
(100 %)
1 diff
(99.6 %id)
BE708156 head_neck .a 2652 to 2802 1 to 151       151/151
(100 %)
2 diff
(98.7 %id)
DR423168 eye, Pterygium .a 2670 to 3043 386 to 13   AAA Submitted on the opposite strand 374/388
(96 %)
10 diff
(97.5 %id)
C74980   .a 2675 to 3039 380 to 16   AAA   365/365
(100 %)
1 diff
(99.8 %id)
AA541312 metastatic prostate bone lesion .a 2691 to 2884 194 to 1       194/195
(99 %)
0 diff
(100 %id)
EB361912 eye, lens .a 2699 to 3043 345 to 1       345/345
(100 %)
0 diff
(100 %id)
AU150016   .a 2731 to 3043 313 to 1       313/313
(100 %)
3 diff
(99.1 %id)
Z39137 brain, total brain .a 2740 to 3043 304 to 1       304/304
(100 %)
0 diff
(100 %id)
H62313 liver and spleen .a 2746 to 3044 303 to 1     Submitted on the opposite strand 303/312
(97 %)
6 diff
(98.1 %id)
EC502544.
matches multiple genes
Prostate .a 2756 to 2830 9 to 85     also hits gene LOC643387 77/86
(89 %)
8 diff
(90.7 %id)
AA125866 uterus .a 2766 to 3043 279 to 1   fully sequenced,   279/279
(100 %)
0 diff
(100 %id)
AL045296 testis .a 2787 to 3276 1 to 490   tiling clone,   490/490
(100 %)
0 diff
(100 %id)
AW879462 ovary .a 2804 to 2982 179 to 1       179/179
(100 %)
0 diff
(100 %id)
AW879467 ovary .a 2804 to 2989 192 to 9       184/192
(95 %)
0 diff
(100 %id)
BE832647 ovary .a 2804 to 2982 179 to 1       179/179
(100 %)
7 diff
(96.1 %id)
BF360477 ovary .a 2804 to 2967 180 to 17       164/180
(91 %)
0 diff
(100 %id)
AW879514 ovary .a 2875 to 2982 108 to 1       108/108
(100 %)
0 diff
(100 %id)
EC455672.
matches multiple genes
Prostate .a 2941 to 3042 104 to 4   tiling clone, also hits gene LOC643387 101/105
(96 %)
0 diff
(100 %id)
FN153322 breast carcinoma .a 3065 to 3181 117 to 1     Submitted on the opposite strand 117/117
(100 %)
0 diff
(100 %id)
BC059955 Bone, osteosarcoma .a 3190 to 3754 1 to 565   available from MGC, AAA   565/565
(100 %)
0 diff
(100 %id)
CX786101 human embryonic stem cells .a 3239 to 3939 1 to 701   tiling clone,   701/701
(100 %)
0 diff
(100 %id)
AF311304   .a 3388 to 4493 9 to 1118   AAA   1110/1118
(99 %)
6 diff
(99.5 %id)
BE929275 placenta_normal .a 3545 to 3950 467 to 62       406/477
(85 %)
0 diff
(100 %id)
BE929279 placenta_normal .a 3545 to 3950 474 to 70       405/484
(83 %)
0 diff
(100 %id)
BE929282 placenta_normal .a 3545 to 3950 460 to 55       406/470
(86 %)
0 diff
(100 %id)
BE929322 placenta_normal .a 3545 to 3986 454 to 11       444/464
(95 %)
0 diff
(100 %id)
BE929327 placenta_normal .a 3545 to 3950 458 to 53       406/468
(86 %)
0 diff
(100 %id)
BE929331 placenta_normal .a 3545 to 3950 454 to 47       408/464
(87 %)
0 diff
(100 %id)
DR421944 eye, Pterygium .a 3580 to 4279 1 to 700   tiling clone,   700/700
(100 %)
1 diff
(99.9 %id)
AI884399 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3603 to 3950 435 to 88   AAA   348/389
(89 %)
0 diff
(100 %id)
AW844408 colon_normal .a 3700 to 4100 406 to 1       406/412
(98 %)
13 diff
(96.9 %id)
FN132506 breast carcinoma .a 3734 to 3833 95 to 1     Submitted on the opposite strand 95/99
(95 %)
6 diff
(94.0 %id)
AW889877 nervous_tumor .a 3844 to 4186 361 to 15       347/361
(96 %)
0 diff
(100 %id)
AW970411   .a 3861 to 4492 643 to 1     Submitted on the opposite strand 643/643
(100 %)
19 diff
(97.1 %id)
AW901776 nervous_normal .a 3900 to 4255 384 to 26       359/384
(93 %)
0 diff
(100 %id)
BM715998 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4026 to 4233 1 to 208   fully sequenced,   208/208
(100 %)
0 diff
(100 %id)
AW975412   .a 4035 to 4494 580 to 121     Submitted on the opposite strand 460/580
(79 %)
0 diff
(100 %id)
CR611899 Placenta Cot 25-normalized .a 4092 to 4494 1 to 403       403/403
(100 %)
0 diff
(100 %id)
AA580794 bulk germ cell seminoma .a 4100 to 4494 395 to 1       395/395
(100 %)
0 diff
(100 %id)
AA917940 Kidney .a 4151 to 4590 440 to 1       440/440
(100 %)
0 diff
(100 %id)
BU739750 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4203 to 4585 402 to 20   fully sequenced, AAA   383/383
(100 %)
0 diff
(100 %id)
CB163965 Liver .a 4209 to 4692 484 to 1   tiling clone, Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
FN099346 breast carcinoma .a 4228 to 4339 111 to 1     Submitted on the opposite strand 111/111
(100 %)
3 diff
(97.3 %id)
BX509845   .b 1 to 703 3 to 705   tiling clone,   705/705
(100 %)
7 diff
(99.1 %id)
DA037444   .b 2 to 538 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA371953 thalamus .b 2 to 535 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB055095 testis .b 2 to 569 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB244228 uterus, tumor tissue .b 2 to 564 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
CX754805 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 25 to 787 1 to 763   tiling clone, Submitted on the opposite strand 763/763
(100 %)
0 diff
(100 %id)
BM558331 duodenal adenocarcinoma, cell line, small intestine .b 47 to 769 1 to 723       723/1044
(69 %)
10 diff
(99.1 %id)
BU620881 Cell Line, Chondrosarcoma .b 675 to 1378 718 to 15   tiling clone, AAA   704/704
(100 %)
0 diff
(100 %id)
DA740376   .c 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
BI547516 brain, hippocampus .c 13 to 640 1 to 636       636/777
(81 %)
15 diff
(98.1 %id)
BI550396 brain, hippocampus .c 13 to 700 1 to 687   tiling clone,   687/687
(100 %)
9 diff
(98.7 %id)
DB036734 testis .c 14 to 586 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
TI_44168305   .c 17 to 764 85 to 857   tiling clone,   699/857
(81 %)
29 diff
(96.7 %id)
TI_44169520   .c 17 to 700 88 to 770       683/770
(88 %)
11 diff
(98.6 %id)
AW665815 pooled .c 751 to 1203 468 to 16   tiling clone, AAA   453/453
(100 %)
7 diff
(98.5 %id)
DC353333 brain .d 1 to 560 2 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC308167 cerebellum .d 1 to 543 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
DC308946 cerebellum .d 1 to 591 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DC374133 brain .d 1 to 566 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC391269 Spleen .d 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DC405884 thymus .d 1 to 556 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
AK295920 substantia nigra .d 31 to 1387 1 to 1357 exact tiling clone,   1357/1357
(100 %)
0 diff
(100 %id)
DC336679 substantia nigra .d 31 to 595 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
DA494366 brain .e 1 to 561 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
CD364512 Alveolar Macrophage, lung .e 503 to 1185 701 to 19   tiling clone, AAA   683/683
(100 %)
0 diff
(100 %id)
BU155758 melanotic melanoma, skin .f 1 to 629 24 to 652 C187X E189R D190G I192D I193P ... tiling clone,   779/877
(88 %)
32 diff
(96.4 %id)
DA797727 brain .g -9 to 552 2 to 566   tiling clone, capped   565/565
(100 %)
5 diff
(99.2 %id)
BG484362 lung .g 8 to 798 1 to 786       786/787
(99 %)
20 diff
(97.5 %id)
DA243685 brain .g 10 to 585 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
CN355994 embryonic stem cells, cell lines H1, H7, andH9 .g 38 to 395 13 to 372   tiling clone,   360/372
(96 %)
7 diff
(98.2 %id)
BG480879 choriocarcinoma, placenta .g 106 to 833 1 to 727   tiling clone,   727/900
(80 %)
16 diff
(98.3 %id)
BE901725 choriocarcinoma, placenta .g 123 to 869 1 to 740       740/975
(75 %)
31 diff
(96.9 %id)
TI_227713541   .g 494 to 1312 872 to 63   tiling clone, AAA   810/983
(82 %)
11 diff
(98.9 %id)
BP292857 lung .g 624 to 1209 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
TI_57197738   .g 699 to 1309 37 to 645       609/645
(94 %)
8 diff
(98.8 %id)
BI820429 pooled brain, lung, testis .g 700 to 1309 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
AI446283 adenocarcinoma, Pancreas .g 1186 to 1312 142 to 16   AAA   127/127
(100 %)
0 diff
(100 %id)
DA167367 amygdala .h 1 to 560 2 to 561   tiling clone, capped   560/560
(100 %)
3 diff
(99.5 %id)
DA031330   .h 5 to 587 2 to 584 D13G tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
BP326527 prostata .i 1 to 584 1 to 584 exact tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
W88884 liver and spleen .j 1 to 252 4 to 255 A2L D3H tiling clone,   252/255
(98 %)
7 diff
(97.3 %id)
AW439536 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j 410 to 900 491 to 1   tiling clone,   491/491
(100 %)
0 diff
(100 %id)
DB535374 hippocampus .j 475 to 898 1 to 423     Submitted on the opposite strand 423/423
(100 %)
1 diff
(99.8 %id)
W88792 liver and spleen .j 483 to 898 416 to 1       416/416
(100 %)
0 diff
(100 %id)
BQ356232 head_neck .k 1 to 409 422 to 0 K10E tiling clone,   416/422
(98 %)
5 diff
(98.9 %id)
AL048311 uterus .k 6 to 667 1 to 664   tiling clone,   664/702
(94 %)
13 diff
(98.2 %id)
AA782650 parathyroid gland, parathyroid tumor .k 368 to 596 1 to 229   tiling clone, Submitted on the opposite strand 229/229
(100 %)
0 diff
(100 %id)
BP382811 ilea mucosa .l -9 to 332 1 to 342 Q21H S25X R30X     342/499
(68 %)
8 diff
(98.4 %id)
BU963619 mixed (pool of 40 RNAs) .l 1 to 321 8 to 328 exact tiling clone,   328/835
(39 %)
3 diff
(99.7 %id)
BM146544 leukopheresis .l 1 to 324 8 to 330 S20P Q21R Q22C R23G P24L ...     330/370
(89 %)
13 diff
(96.5 %id)
BM153808 leukopheresis .l 1 to 329 8 to 336 exact     336/351
(95 %)
6 diff
(98.3 %id)
BF675487 Prostate .l 8 to 326 1 to 318   AAA   318/318
(100 %)
7 diff
(97.8 %id)
CN355998 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 13 to 312 1 to 300       300/300
(100 %)
0 diff
(100 %id)
AI480321 Kidney .l 92 to 642 555 to 5   tiling clone,   551/555
(99 %)
0 diff
(100 %id)
DB089451 testis .m 1 to 483 2 to 485 L27H L28A S29L T30H V31G ... tiling clone, capped   484/484
(100 %)
3 diff
(99.4 %id)
DA807782 brain .m 2 to 545 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DB138262 thymus .m 2 to 513 2 to 513 exact capped   512/512
(100 %)
0 diff
(100 %id)
CA336310 anterior rhombomeres 1-4 (4 pooled) .m 6 to 477 34 to 505 exact tiling clone, AAA   472/505
(93 %)
6 diff
(98.9 %id)
DB144590 thymus .m 6 to 541 8 to 543 exact capped   536/536
(100 %)
0 diff
(100 %id)
DB511723 testis .n 1 to 429 1 to 429 exact tiling clone, Submitted on the opposite strand 429/429
(100 %)
2 diff
(99.6 %id)
AK299454 tongue Gene TARDBP, variant not shown         Suspected internal deletion, this clone was ignored    
BI023269 marrow Gene TARDBP, variant not shown              
BX955897   Gene TARDBP, variant not shown              
EF434183   Gene TARDBP, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
T79036 liver and spleen Gene TARDBP, variant not shown         Submitted on the opposite strand    
AF086222   Gene TARDBP, variant not shown       AAA      
W01870 heart Gene TARDBP, variant not shown              
W32361 heart Gene TARDBP, variant not shown              
AA989060 carcinoid, lung Gene TARDBP, variant not shown              
BM990413 lung, Metastatic Chondrosarcoma Gene TARDBP, variant not shown       AAA      
DB146346 thymus Gene TARDBP, variant not shown       capped      
DB345763 thymus Gene TARDBP, variant not shown              
BM674777 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene TARDBP, variant not shown       fully sequenced,      
BM717415 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene TARDBP, variant not shown       fully sequenced, AAA      
1275 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI