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Gene TACR1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene TACR1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA779249 brain .a 1 to 531 2 to 532   tiling clone, capped   531/531
(100 %)
1 diff
(99.9 %id)
NM_001058.3   .a 181 to 4958 1 to 4778 exact RefSeq, AAA   4778/4778
(100 %)
0 diff
(100 %id)
DB214601 trachea .a 181 to 722 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB285356 uterus .a 181 to 726 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB203452 trachea .a 182 to 754 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB249618 uterus .a 182 to 660 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
AK289765 brain .a 212 to 2105 1 to 1894 exact tiling clone,   1894/1894
(100 %)
0 diff
(100 %id)
DA223331 brain .a 213 to 773 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
M74290   .a 553 to 2318 1 to 1766 exact     1766/1766
(100 %)
9 diff
(99.5 %id)
M84425 brain .a 643 to 2317 1 to 1674 exact tiling clone,   1674/1674
(100 %)
4 diff
(99.8 %id)
S62045 lung .a 717 to 2188 16 to 1486 exact     1471/1486
(98 %)
8 diff
(99.5 %id)
M81797 lung .a 722 to 2188 1 to 1466 exact     1466/1466
(100 %)
4 diff
(99.8 %id)
BC074911 Pooled tissue, PCR rescued clones .a 743 to 2038 1 to 1295 exact available from MGC,   1295/1295
(100 %)
2 diff
(99.9 %id)
BC074912 Pooled tissue, PCR rescued clones .a 743 to 2038 1 to 1295 exact available from MGC,   1295/1295
(100 %)
2 diff
(99.9 %id)
CO959525 mixed .a 765 to 1351 1 to 587       587/694
(84 %)
4 diff
(99.5 %id)
AY462098 brain .a 766 to 1989 1 to 1224 exact     1224/1224
(100 %)
0 diff
(100 %id)
CD246198 mixed .a 766 to 1503 9 to 747       739/825
(89 %)
11 diff
(98.7 %id)
M76675 lymphocyte .a 766 to 1990 1 to 1225 V116C V218I     1225/1230
(99 %)
6 diff
(99.6 %id)
BC095528 G-protein coupled receptors obtained byPCR-directed strategy .a 769 to 1988 1 to 1220       1220/1220
(100 %)
4 diff
(99.7 %id)
BE765394 nervous_tumor .a 907 to 1130 242 to 19       224/242
(92 %)
0 diff
(100 %id)
CO959540 mixed .a 1362 to 1983 646 to 29       618/761
(81 %)
7 diff
(99.1 %id)
AL120339 amygdala .a 2125 to 2601 1 to 475   tiling clone,   475/475
(100 %)
4 diff
(99.2 %id)
CA405425 adipose .a 2683 to 3343 1 to 661   tiling clone,   661/661
(100 %)
1 diff
(99.9 %id)
DA309061 hippocampus .a 2719 to 3298 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA275993 corpus callosum .a 2892 to 3441 2 to 551   tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DB273716 uterus .a 2894 to 3441 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
F13416 brain, total brain .a 3247 to 3599 1 to 352   tiling clone,   352/356
(98 %)
5 diff
(98.6 %id)
F11493 brain, total brain .a 3247 to 3557 1 to 310       310/310
(100 %)
1 diff
(99.7 %id)
AA461490   .a 4484 to 4963 481 to 2   tiling clone, fully sequenced,   480/481
(99 %)
5 diff
(99.0 %id)
AI376900   .a 4504 to 4958 462 to 8       455/462
(98 %)
0 diff
(100 %id)
AW206679   .a 4522 to 4958 454 to 18   AAA   437/437
(100 %)
1 diff
(99.8 %id)
AW262948 adenocarcinoma, Pancreas .a 4552 to 4958 408 to 2       407/408
(99 %)
0 diff
(100 %id)
AI129589 uterus .a 4559 to 4958 414 to 15   AAA   400/400
(100 %)
1 diff
(99.8 %id)
AI139402 uterus .a 4613 to 4958 360 to 15   AAA   346/346
(100 %)
0 diff
(100 %id)
AA460135   .a 4630 to 4962 1 to 331   fully sequenced,   331/331
(100 %)
9 diff
(97.3 %id)
F11001 brain, total brain .a 4634 to 4960 326 to 1       326/326
(100 %)
1 diff
(99.7 %id)
F09154 brain, total brain .a 4635 to 4960 325 to 1   tiling clone,   325/325
(100 %)
1 diff
(99.7 %id)
AI393632 pooled .a 4706 to 4954 282 to 34       249/282
(88 %)
0 diff
(100 %id)
NM_015727.2   .b 1 to 1732 1 to 1732 exact RefSeq,   1732/1732
(100 %)
0 diff
(100 %id)
M84426 brain .b 463 to 1732 1 to 1268 exact tiling clone,   1268/1268
(100 %)
6 diff
(99.6 %id)
DB275477 uterus .c 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
BG218794   .d 1 to 327 338 to 12 L11V L28F L30V tiling clone, Submitted on the opposite strand 327/338
(96 %)
8 diff
(97.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI