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Gene SUPT6HTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
545 supporting clones for gene SUPT6H back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP365322 lung .a 1 to 581 1 to 581   tiling clone,   581/581
(100 %)
0 diff
(100 %id)
BP218583 caudate nucleus .a 40 to 622 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP249070 Kidney .a 46 to 628 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BQ439142 embryonal carcinoma, cell line, testis .a 46 to 692 36 to 688       653/987
(66 %)
45 diff
(95.5 %id)
BP201970 amygdala .a 56 to 638 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DR156128 human embryonic stem cells differentiated toan early endodermal cell type .a 59 to 798 1 to 740       740/740
(100 %)
1 diff
(99.9 %id)
BC150268 Clones donated by Kazusa DNA Research Inst. .a 69 to 5944 1 to 5876 exact tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 5876/5876
(100 %)
0 diff
(100 %id)
D79984   .a 69 to 5944 1 to 5876 exact available from KIAA,   5876/5876
(100 %)
1 diff
(100.0 %id)
NM_003170.3   .a 69 to 5944 1 to 5876 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 5876/5876
(100 %)
0 diff
(100 %id)
BC136522 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 71 to 5851 1 to 5781 exact     5781/5781
(100 %)
1 diff
(100.0 %id)
BC136524 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 71 to 5851 1 to 5781 exact     5781/5781
(100 %)
1 diff
(100.0 %id)
TI_1959502821   .a 71 to 1053 88 to 1065       978/1165
(83 %)
54 diff
(95.4 %id)
BF875921 lung_tumor .a 178 to 583 17 to 422       406/422
(96 %)
7 diff
(98.4 %id)
AI908281 breast .a 223 to 587 30 to 399       370/415
(89 %)
16 diff
(96.2 %id)
BX641484   .a 284 to 641 358 to 1     Submitted on the opposite strand 358/358
(100 %)
1 diff
(99.8 %id)
CR981851 T-Lymphocytes .a 300 to 1138 1 to 839       839/847
(99 %)
3 diff
(99.7 %id)
CV570197 cornea, eye .a 302 to 920 1 to 619       619/619
(100 %)
0 diff
(100 %id)
CV337285 head_neck .a 405 to 600 1 to 196       196/210
(93 %)
12 diff
(94.3 %id)
CN302997 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 548 to 867 1 to 320       320/320
(100 %)
1 diff
(99.7 %id)
CN302992 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 594 to 1172 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DA800622 brain .a 646 to 1202 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB083572 testis .a 646 to 1213 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA323360 hippocampus .a 647 to 1133 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
CN302994 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 699 to 1161 1 to 463       463/463
(100 %)
0 diff
(100 %id)
BM801194 embryonal carcinoma, cell line, testis .a 720 to 1271 30 to 583       554/1234
(44 %)
12 diff
(99.1 %id)
DB232693 trachea .a 763 to 1316 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AW893449 nervous_normal .a 776 to 1167 4 to 395       392/395
(99 %)
5 diff
(98.8 %id)
AU140872 placenta .a 826 to 1658 2 to 832   capped   831/844
(98 %)
11 diff
(98.7 %id)
AU140825 placenta .a 846 to 1504 2 to 661   capped   660/747
(88 %)
4 diff
(99.5 %id)
DA460351 tongue, tumor tissue .a 848 to 1097 2 to 252   capped   251/251
(100 %)
1 diff
(99.7 %id)
AL135573 melanoma (MeWo cell line) .a 859 to 1596 1 to 738       738/738
(100 %)
0 diff
(100 %id)
CF136810 lymph .a 879 to 1444 1 to 566       566/566
(100 %)
5 diff
(99.2 %id)
BQ329201 lung_normal .a 884 to 1340 1 to 459       459/459
(100 %)
28 diff
(93.9 %id)
TI_154166098   .a 885 to 1636 77 to 828       752/752
(100 %)
19 diff
(97.5 %id)
BF095715 uterus_tumor .a 912 to 1390 1 to 479       479/479
(100 %)
2 diff
(99.6 %id)
TI_154105517   .a 1050 to 1831 904 to 131       774/1029
(75 %)
18 diff
(98.3 %id)
DB063018 testis .a 1103 to 1660 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CA446683 Chondrosarcoma, Left Pubic Bone .a 1183 to 1831 671 to 23   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 649/671
(96 %)
9 diff
(98.7 %id)
R41149   .a 1212 to 1558 1 to 345       345/345
(100 %)
6 diff
(98.3 %id)
DB073289 testis .a 1293 to 1821 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BU167325 eye, retinoblastoma .a 1315 to 2194 1 to 884       884/944
(93 %)
33 diff
(96.6 %id)
BF982948 duodenal adenocarcinoma, cell line, small intestine .a 1326 to 1961 30 to 657       628/912
(68 %)
21 diff
(97.7 %id)
DA221618 brain .a 1337 to 1879 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA185924 amygdala .a 1395 to 1929 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB224096 trachea .a 1406 to 1976 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB293709   .a 1433 to 2267 2 to 827   capped   826/827
(99 %)
18 diff
(97.9 %id)
BM750671 Ascites, stomach .a 1468 to 1999 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
BE813921 breast_normal .a 1522 to 2080 1 to 557       557/557
(100 %)
8 diff
(98.6 %id)
BM801808 eye, retinoblastoma .a 1524 to 2388 36 to 908       873/1151
(75 %)
27 diff
(97.7 %id)
DA246165 brain .a 1528 to 2114 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
TI_1959499131   .a 1530 to 2671 1142 to 8       1135/1291
(87 %)
8 diff
(99.4 %id)
DB096090 testis .a 1551 to 2108 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CN303000 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1584 to 2311 1 to 728       728/728
(100 %)
1 diff
(99.9 %id)
DA992353 synovial membrane tissue from rheumatioidarthritis .a 1622 to 2176 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BQ069650 brain, neuroblastoma, cell line .a 1646 to 2525 1 to 887       887/1073
(82 %)
19 diff
(98.3 %id)
CN302996 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1793 to 2450 1 to 658       658/658
(100 %)
2 diff
(99.7 %id)
DA216315 brain .a 1796 to 2253 2 to 461   capped   460/460
(100 %)
2 diff
(99.6 %id)
BQ304426 breast .a 1810 to 2001 1 to 193       193/198
(97 %)
8 diff
(96.0 %id)
CR979287 T-Lymphocytes .a 1833 to 2407 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DA404776 thalamus .a 1858 to 2409 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
TI_1959499145   .a 1893 to 3005 1125 to 17       1113/1267
(87 %)
21 diff
(98.4 %id)
TI_1959500413   .a 1893 to 3094 1198 to 10       1189/1287
(92 %)
16 diff
(98.8 %id)
BP288542 lung .a 1913 to 2494 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA450773 tongue, tumor tissue .a 1914 to 2484 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BU431394 lymph .a 1950 to 2516 8 to 574       567/574
(98 %)
2 diff
(99.7 %id)
TI_154153287   .a 1950 to 2560 80 to 690       611/612
(99 %)
4 diff
(99.4 %id)
DA773889 brain .a 1967 to 2541 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BM452036 eye, retinoblastoma .a 1974 to 2842 1 to 873       873/882
(98 %)
5 diff
(99.5 %id)
DA228097 brain .a 1991 to 2552 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BG385888 adenocarcinoma cell line, colon .a 2015 to 2644 1 to 630       630/849
(74 %)
8 diff
(99.1 %id)
CN302998 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2022 to 2726 1 to 705       705/705
(100 %)
2 diff
(99.8 %id)
BU429978 lymph .a 2037 to 2448 1 to 412       412/412
(100 %)
3 diff
(99.3 %id)
TI_154151102   .a 2042 to 2646 78 to 677       600/652
(92 %)
19 diff
(97.1 %id)
U38623   .a 2043 to 2428 1 to 386       386/386
(100 %)
0 diff
(100 %id)
DB230457 trachea .a 2057 to 2642 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA229032 brain .a 2075 to 2641 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA510463 brain .a 2081 to 2663 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
CB139586 Liver .a 2084 to 2475 1 to 393       393/393
(100 %)
1 diff
(99.8 %id)
BP281598 bone marrow .a 2085 to 2672 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DB094226 testis .a 2086 to 2655 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP345025 synovial membrane .a 2088 to 2636 1 to 549       549/554
(99 %)
1 diff
(99.9 %id)
DA755998   .a 2095 to 2671 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BP284920 lung .a 2106 to 2689 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB292812   .a 2107 to 2873 2 to 768   capped   767/767
(100 %)
4 diff
(99.5 %id)
DB292828   .a 2107 to 2849 2 to 743   capped   742/742
(100 %)
8 diff
(99.0 %id)
BC003696 Cervix, carcinoma .a 2108 to 5944 1 to 3837   available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3837/3837
(100 %)
0 diff
(100 %id)
BF795108 lymph, lymphoma, cell line .a 2139 to 2927 1 to 791       789/916
(86 %)
14 diff
(98.5 %id)
BE895879 melanotic melanoma, skin .a 2173 to 2736 1 to 566       566/566
(100 %)
5 diff
(99.2 %id)
AL134298 brain .a 2174 to 2633 1 to 460       460/460
(100 %)
3 diff
(99.4 %id)
BE544225 cervical carcinoma cell line, cervix .a 2191 to 2802 68 to 697   available from MGC,   630/884
(71 %)
41 diff
(95.4 %id)
CN302995 embryonic stem cells, cell lines H1, H7, andH9 .a 2210 to 2886 1 to 677       677/677
(100 %)
2 diff
(99.8 %id)
DA311360 hippocampus .a 2281 to 2845 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA323029 hippocampus .a 2300 to 2858 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA217704 brain .a 2344 to 2878 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA217712 brain .a 2344 to 2867 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
CN302993 embryonic stem cells, cell lines H1, H7, andH9 .a 2356 to 3111 1 to 756       756/756
(100 %)
2 diff
(99.8 %id)
CF136108 lymph .a 2357 to 2761 8 to 412       405/413
(98 %)
12 diff
(97.1 %id)
TI_154164953   .a 2357 to 2991 72 to 706       635/891
(71 %)
38 diff
(95.8 %id)
DA724878   .a 2380 to 2943 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_1959500411   .a 2388 to 3530 1148 to 14       1135/1285
(88 %)
9 diff
(99.3 %id)
BP240010 Liver .a 2399 to 2962 1 to 564       564/564
(100 %)
6 diff
(99.0 %id)
DA722357   .a 2410 to 2988 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB158722 thymus .a 2410 to 3008 2 to 600   capped   599/599
(100 %)
1 diff
(99.9 %id)
BF350027 head_neck .a 2413 to 3050 12 to 648       637/694
(91 %)
10 diff
(98.6 %id)
BF350028 head_neck .a 2413 to 2941 35 to 563       529/590
(89 %)
8 diff
(98.7 %id)
BG117184 adenocarcinoma, cell line, Liver .a 2429 to 3161 1 to 746       746/880
(84 %)
29 diff
(96.8 %id)
AW379337 head_neck .a 2434 to 2948 1 to 516       516/516
(100 %)
10 diff
(98.1 %id)
BF902890 marrow .a 2436 to 2858 11 to 433       423/440
(96 %)
14 diff
(96.9 %id)
DA852771 placenta .a 2455 to 3012 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA441383 tongue, tumor tissue .a 2462 to 3033 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BF895965 marrow .a 2470 to 2701 1 to 233       233/233
(100 %)
10 diff
(95.8 %id)
BE708771 head_neck .a 2492 to 2723 243 to 14       231/247
(93 %)
1 diff
(99.6 %id)
BP285276 lung .a 2493 to 3072 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
DA877759 Prostate .a 2543 to 3110 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BF853685 lung_normal .a 2554 to 2919 371 to 9     Submitted on the opposite strand 363/525
(69 %)
3 diff
(99.5 %id)
BF853696 lung_normal .a 2554 to 2924 374 to 6     Submitted on the opposite strand 369/523
(70 %)
1 diff
(99.9 %id)
AL047013 uterus .a 2563 to 2925 1 to 361       361/363
(99 %)
8 diff
(97.8 %id)
CR988352 T-Lymphocytes .a 2565 to 3118 1 to 555       555/560
(99 %)
2 diff
(99.7 %id)
BF797463 lymph, lymphoma, cell line .a 2567 to 3303 1 to 741       741/1126
(65 %)
18 diff
(98.5 %id)
DB127110 thymus .a 2580 to 3130 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
AU140622 placenta .a 2612 to 3428 2 to 817   capped   816/816
(100 %)
17 diff
(98.0 %id)
BU187558 eye, retinoblastoma .a 2629 to 3288 1 to 667       667/821
(81 %)
9 diff
(99.0 %id)
DB132919 thymus .a 2639 to 3202 4 to 567   capped   564/566
(99 %)
6 diff
(99.0 %id)
DB165547 thymus .a 2639 to 3232 4 to 597   capped   594/596
(99 %)
6 diff
(99.0 %id)
DA808042 brain .a 2656 to 3214 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA929219 small intestine .a 2657 to 3222 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA304027 hippocampus .a 2667 to 3233 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA996602   .a 2672 to 3175 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
CN302991 embryonic stem cells, cell lines H1, H7, andH9 .a 2714 to 3315 9 to 611       603/611
(98 %)
8 diff
(98.7 %id)
CU444562 epidermis .a 2723 to 3184 8 to 469       462/481
(96 %)
7 diff
(98.6 %id)
BP221440 colon .a 2734 to 3306 1 to 573       573/573
(100 %)
5 diff
(99.2 %id)
BP286958 lung .a 2761 to 3342 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP315442 mammary gland .a 2764 to 3311 1 to 547       547/582
(93 %)
31 diff
(94.7 %id)
BP315478 mammary gland .a 2764 to 3346 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA805550 brain .a 2770 to 3332 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
TI_1959499137   .a 2778 to 3938 1163 to 3       1172/1265
(92 %)
83 diff
(93.5 %id)
CO245384 Chondrosarcoma Lung Metastasis cell lines, lung .a 2783 to 3457 8 to 675       668/815
(81 %)
15 diff
(98.2 %id)
U38658   .a 2787 to 3140 1 to 355       355/355
(100 %)
1 diff
(99.8 %id)
CX758150 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2792 to 3582 1 to 790     Submitted on the opposite strand 790/792
(99 %)
4 diff
(99.5 %id)
DA801714 brain .a 2793 to 3362 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA719867   .a 2799 to 3365 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BC017105 Lung, small cell carcinoma .a 2840 to 5035 1 to 2196   available from MGC, AAA   2196/2204
(99 %)
2 diff
(100.0 %id)
BE267480 lung, small cell carcinoma .a 2842 to 3510 1 to 694   available from MGC,   694/728
(95 %)
38 diff
(94.8 %id)
AW238409 carcinoma in situ from retromolar trigone .a 2857 to 3234 413 to 36       378/423
(89 %)
11 diff
(97.4 %id)
BF685611 leiomyosarcoma cell line, uterus .a 2869 to 3653 1 to 795       795/980
(81 %)
24 diff
(97.6 %id)
BF916296 uterus_tumor .a 2892 to 3272 380 to 3     Submitted on the opposite strand 378/380
(99 %)
0 diff
(100 %id)
FN072523 breast carcinoma .a 2903 to 3000 1 to 98       98/98
(100 %)
0 diff
(100 %id)
BF081754 amnion_normal .a 2951 to 3176 1 to 227       227/233
(97 %)
11 diff
(95.3 %id)
BP343917 synovial membrane .a 2969 to 3550 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB162798 thymus .a 2980 to 3567 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
CN302999 embryonic stem cells, cell lines H1, H7, andH9 .a 3001 to 3780 1 to 780       780/780
(100 %)
2 diff
(99.8 %id)
AL135310 melanoma (MeWo cell line) .a 3010 to 3788 1 to 779       779/779
(100 %)
3 diff
(99.7 %id)
BP346352 synovial membrane .a 3010 to 3589 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA114860 cerebellum .a 3038 to 3607 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB293057   .a 3041 to 3851 2 to 815   capped   814/816
(99 %)
10 diff
(98.8 %id)
DB261145 uterus .a 3044 to 3612 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA006678   .a 3058 to 3568 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
BU528708 epidermoid carcinoma, cell line, lung .a 3058 to 3999 1 to 957       957/957
(100 %)
20 diff
(98.0 %id)
DB164919 thymus .a 3070 to 3649 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA527078 brain .a 3106 to 3661 2 to 557   capped   556/557
(99 %)
1 diff
(99.9 %id)
DA503034 brain .a 3108 to 3679 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA506226 brain .a 3121 to 3682 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA787946 brain .a 3122 to 3709 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB249129 uterus .a 3122 to 3587 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA030888   .a 3124 to 3675 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA051603   .a 3124 to 3679 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA585536 lung .a 3125 to 3718 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
CN303001 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3130 to 3783 1 to 654       654/654
(100 %)
0 diff
(100 %id)
CK431168 eye, lacrimal gland .a 3149 to 3731 1 to 583       583/583
(100 %)
7 diff
(98.8 %id)
DA303438 hippocampus .a 3178 to 3764 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
AU116846 whole embryo, mainly head .a 3178 to 3924 2 to 753   capped   752/752
(100 %)
9 diff
(98.9 %id)
DA047381   .a 3217 to 3769 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CN302990 embryonic stem cells, cell lines H1, H7, andH9 .a 3236 to 3964 1 to 729       729/729
(100 %)
2 diff
(99.8 %id)
BP332238 renal proximal tubule .a 3244 to 3824 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BI255281 cervical carcinoma cell line, cervix .a 3261 to 3914 1 to 654       654/656
(99 %)
2 diff
(99.7 %id)
BG768631 melanotic melanoma, high MDR (cell line), skin .a 3262 to 3854 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
AA158651 Pancreas .a 3273 to 3728 1 to 456       456/461
(98 %)
6 diff
(98.7 %id)
W27078 eye, retina .a 3290 to 3694 420 to 12       409/462
(88 %)
6 diff
(98.8 %id)
BQ326846 colon_normal .a 3293 to 3594 41 to 344       304/345
(88 %)
16 diff
(95.4 %id)
BF755000 colon .a 3297 to 3733 440 to 9     Submitted on the opposite strand 432/440
(98 %)
3 diff
(99.4 %id)
BI009682 kidney_tumor .a 3299 to 3727 472 to 40       433/472
(91 %)
20 diff
(95.8 %id)
DA160794 amygdala .a 3308 to 3877 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
CD672204 eye, Iris .a 3321 to 3851 1 to 531       531/531
(100 %)
0 diff
(100 %id)
BQ319106 colon .a 3322 to 3781 489 to 30       460/489
(94 %)
1 diff
(99.8 %id)
CR990533 T-Lymphocytes .a 3323 to 3822 1 to 501       501/501
(100 %)
3 diff
(99.5 %id)
BF801185 colon_ins .a 3338 to 3819 1 to 482       482/482
(100 %)
6 diff
(98.8 %id)
BP249010 Kidney .a 3369 to 3966 1 to 598       598/598
(100 %)
0 diff
(100 %id)
AW374905 colon .a 3393 to 3979 7 to 596       590/596
(98 %)
15 diff
(97.5 %id)
AW374859 colon .a 3400 to 3908 13 to 520       508/525
(96 %)
11 diff
(98.0 %id)
DA494879 brain .a 3400 to 3900 2 to 504   capped   503/503
(100 %)
2 diff
(99.7 %id)
FN046219 breast carcinoma .a 3426 to 3493 1 to 68       68/69
(98 %)
1 diff
(98.6 %id)
BE796345 lung, small cell carcinoma .a 3426 to 4204 1 to 777       777/803
(96 %)
4 diff
(99.6 %id)
BF376204 testis_normal .a 3433 to 3825 1 to 394       394/394
(100 %)
8 diff
(98.0 %id)
BP250168 hippocampus .a 3434 to 4025 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
DA786809 brain .a 3434 to 4000 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BG107054 lymph, lymphoma, cell line .a 3440 to 4093 1 to 657       655/1230
(53 %)
17 diff
(98.7 %id)
BQ941693 large cell carcinoma, lung .a 3446 to 4378 1 to 933       933/933
(100 %)
5 diff
(99.5 %id)
DA933533 Spleen .a 3467 to 4033 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
BG385661 adenocarcinoma cell line, colon .a 3475 to 4228 1 to 746       748/771
(97 %)
10 diff
(98.8 %id)
BG386200 adenocarcinoma cell line, colon .a 3475 to 4292 1 to 816       816/828
(98 %)
17 diff
(98.0 %id)
BG386203 adenocarcinoma cell line, colon .a 3475 to 4070 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
BG746577 adenocarcinoma cell line, colon .a 3475 to 4317 1 to 840       840/841
(99 %)
16 diff
(98.1 %id)
BG747202 adenocarcinoma cell line, colon .a 3475 to 4204 1 to 730       730/730
(100 %)
1 diff
(99.9 %id)
BE513084 adenocarcinoma cell line, colon .a 3476 to 4341 42 to 900       859/905
(94 %)
34 diff
(96.3 %id)
BE512671 adenocarcinoma cell line, colon .a 3495 to 4128 1 to 634       634/962
(65 %)
7 diff
(99.3 %id)
DA698362   .a 3514 to 4043 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
BE548027 cervical carcinoma cell line, cervix .a 3530 to 4253 1 to 719       719/763
(94 %)
10 diff
(98.7 %id)
BI029085 marrow .a 3544 to 3997 454 to 1       454/454
(100 %)
4 diff
(99.2 %id)
DA768732 brain .a 3614 to 4143 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
AU125788   .a 3617 to 4368 2 to 752   capped   751/759
(98 %)
5 diff
(99.4 %id)
DA051864   .a 3630 to 4196 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CR976689 T-Lymphocytes .a 3631 to 4580 1 to 951       951/951
(100 %)
2 diff
(99.8 %id)
BM792062 Ascites, stomach .a 3634 to 4305 1 to 672       672/672
(100 %)
0 diff
(100 %id)
DA875751 Prostate .a 3642 to 4198 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BE798081 lung, small cell carcinoma .a 3652 to 4484 14 to 838       825/1010
(81 %)
26 diff
(97.5 %id)
BE794094 lung, small cell carcinoma .a 3676 to 4480 1 to 806       806/931
(86 %)
19 diff
(98.0 %id)
AA337050 endometrium .a 3717 to 4003 1 to 287       287/287
(100 %)
0 diff
(100 %id)
BP243777 Liver .a 3739 to 4307 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
BG425466 Kidney, renal cell adenocarcinoma .a 3742 to 4341 1 to 617       613/993
(61 %)
17 diff
(98.3 %id)
BP345100 synovial membrane .a 3749 to 4331 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BF898377 marrow .a 3751 to 4311 563 to 3     Submitted on the opposite strand 561/563
(99 %)
1 diff
(99.9 %id)
BM474758 eye, retinoblastoma .a 3752 to 4688 1 to 941       941/1066
(88 %)
30 diff
(97.2 %id)
BC073963 Testis, embryonal carcinoma .a 3790 to 5944 107 to 2261   available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2155/2261
(95 %)
6 diff
(99.8 %id)
BM469052 embryonal carcinoma, cell line, testis .a 3790 to 4462 108 to 785   available from MGC,   676/1012
(66 %)
18 diff
(98.3 %id)
BP205002 coronary artery .a 3805 to 4372 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
AI521801 Kidney .a 3810 to 4095 286 to 1       286/286
(100 %)
1 diff
(99.7 %id)
DA212143 brain .a 3818 to 4349 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA248865 brain .a 3818 to 4401 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BP199328 brain .a 3830 to 4418 1 to 589       589/589
(100 %)
0 diff
(100 %id)
AW375029 colon .a 3831 to 4411 572 to 1       572/577
(99 %)
19 diff
(96.8 %id)
AW375038 colon .a 3831 to 4422 593 to 1       593/595
(99 %)
8 diff
(98.7 %id)
BF753926 colon .a 3856 to 4279 429 to 7     Submitted on the opposite strand 423/429
(98 %)
0 diff
(100 %id)
AA305063 colon .a 3869 to 4391 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BI756347 brain .a 3877 to 4717 1 to 846       846/1013
(83 %)
11 diff
(99.0 %id)
TI_57221130   .a 3879 to 4717 87 to 930       844/1097
(76 %)
15 diff
(98.7 %id)
TI_1959499143   .a 3883 to 4968 1104 to 21       1088/1269
(85 %)
6 diff
(99.6 %id)
BI756246 brain .a 3883 to 4170 3 to 295       291/295
(98 %)
18 diff
(93.9 %id)
TI_57216619   .a 3883 to 4170 55 to 347       291/347
(83 %)
18 diff
(94.9 %id)
CX788934 human embryonic stem cells .a 3885 to 4701 1 to 817       817/817
(100 %)
1 diff
(99.9 %id)
BF983723 duodenal adenocarcinoma, cell line, small intestine .a 3887 to 4671 1 to 778       780/937
(83 %)
13 diff
(98.7 %id)
AW375036 colon .a 3890 to 4406 523 to 10       514/523
(98 %)
3 diff
(99.5 %id)
CT004004 T-Lymphocytes .a 3896 to 4794 12 to 911       900/911
(98 %)
6 diff
(99.4 %id)
DA814412   .a 3899 to 4463 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BG748927 eye, normal pigmented retinal epithelium .a 3913 to 4719 1 to 806       806/814
(99 %)
6 diff
(99.3 %id)
DB058099 testis .a 3920 to 4458 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA144897 amygdala .a 3978 to 4456 2 to 481   capped   480/480
(100 %)
3 diff
(99.4 %id)
BF989611 placenta_normal .a 3980 to 4516 539 to 4       536/550
(97 %)
10 diff
(98.2 %id)
BC003692 Placenta, choriocarcinoma .a 3991 to 5944 1 to 1954   available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1954/1954
(100 %)
0 diff
(100 %id)
BI008033 kidney_tumor .a 4013 to 4185 10 to 182       173/182
(95 %)
7 diff
(96.2 %id)
AW374999 colon .a 4017 to 4406 397 to 8       390/397
(98 %)
2 diff
(99.5 %id)
BI008154 kidney_tumor .a 4017 to 4533 526 to 10       517/526
(98 %)
4 diff
(99.3 %id)
BP256570 Kidney .a 4024 to 4595 1 to 572       572/584
(97 %)
1 diff
(99.9 %id)
BP256600 Kidney .a 4024 to 4630 1 to 607       607/607
(100 %)
0 diff
(100 %id)
BP256603 Kidney .a 4024 to 4590 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DA130913 alzheimer cortex .a 4030 to 4580 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA289932 hippocampus .a 4030 to 4626 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
BE767173 nervous_tumor .a 4035 to 4236 200 to 1       200/200
(100 %)
9 diff
(95.5 %id)
DA342725 substantia nigra .a 4056 to 4635 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DB230627 trachea .a 4061 to 4312 2 to 248   capped   247/252
(98 %)
9 diff
(96.5 %id)
BE767272 nervous_tumor .a 4067 to 4240 1 to 174       174/174
(100 %)
4 diff
(97.8 %id)
DA358299 subthalamic nucleus .a 4078 to 4627 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
BF877999 lung_tumor .a 4084 to 4475 37 to 428       392/428
(91 %)
7 diff
(98.4 %id)
BE078054 breast .a 4085 to 4368 1 to 284       284/295
(96 %)
2 diff
(99.4 %id)
BE077852 breast .a 4087 to 4364 297 to 19     Submitted on the opposite strand 278/299
(92 %)
1 diff
(99.7 %id)
BE078082 breast .a 4088 to 4368 4 to 290       287/297
(96 %)
20 diff
(93.3 %id)
AU121122 whole embryo, mainly body .a 4088 to 4885 2 to 798   capped   797/797
(100 %)
4 diff
(99.5 %id)
AW607589 head_neck .a 4096 to 4655 33 to 593       561/593
(94 %)
27 diff
(95.5 %id)
EH312094   .a 4100 to 4165 9 to 73       65/73
(89 %)
6 diff
(91.8 %id)
BI015051 lung_tumor .a 4129 to 4664 554 to 21       534/610
(87 %)
10 diff
(98.4 %id)
BQ331459 lung_tumor .a 4129 to 4343 214 to 1       214/243
(88 %)
3 diff
(98.8 %id)
BQ331496 lung_tumor .a 4129 to 4344 226 to 8       219/255
(85 %)
0 diff
(100 %id)
BQ331513 lung_tumor .a 4129 to 4700 44 to 614       571/614
(92 %)
7 diff
(98.9 %id)
BQ331594 lung_tumor .a 4129 to 4696 39 to 606       568/606
(93 %)
8 diff
(98.7 %id)
BQ359596 head_normal .a 4129 to 4304 9 to 184       176/184
(95 %)
6 diff
(96.8 %id)
BE792995 lung, small cell carcinoma .a 4135 to 4939 1 to 804       804/807
(99 %)
18 diff
(97.8 %id)
CF552061 Pooled muscle (cardiac and skeletal) .a 4145 to 5045 25 to 925       901/925
(97 %)
8 diff
(99.2 %id)
CD616485   .a 4158 to 4727 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BE734143 choriocarcinoma, placenta .a 4162 to 4968 1 to 805       805/916
(87 %)
21 diff
(97.8 %id)
AW602051 breast .a 4167 to 4715 552 to 1       552/552
(100 %)
7 diff
(98.8 %id)
BE889274 leiomyosarcoma, uterus .a 4171 to 4902 1 to 727       728/748
(97 %)
17 diff
(97.8 %id)
BQ354852 head_neck .a 4173 to 4583 418 to 2       417/418
(99 %)
7 diff
(98.4 %id)
TI_1959500409   .a 4174 to 5341 1168 to 12       1157/1297
(89 %)
10 diff
(99.3 %id)
BP256808 Kidney .a 4180 to 4764 1 to 585       585/585
(100 %)
12 diff
(98.0 %id)
DA542396 lung .a 4184 to 4758 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
BP252035 Kidney .a 4190 to 4773 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BP252107 Kidney .a 4190 to 4772 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
CF140272 CNCAP(3)T-225 cell line, Prostate .a 4193 to 4773 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BG122856 adenocarcinoma, cell line, Liver .a 4199 to 4876 22 to 691       670/969
(69 %)
31 diff
(96.9 %id)
BG680352 skin, squamous cell carcinoma .a 4199 to 4918 1 to 719       719/719
(100 %)
3 diff
(99.6 %id)
TI_154170669   .a 4199 to 4921 79 to 805       727/881
(82 %)
12 diff
(98.7 %id)
DA366146 subthalamic nucleus .a 4207 to 4775 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AW935170 denis_drash .a 4211 to 4884 1 to 673       673/694
(96 %)
14 diff
(98.0 %id)
BM920099 pooled pancreas and spleen .a 4218 to 5259 16 to 1060       1045/1066
(98 %)
30 diff
(97.2 %id)
AW576999 breast .a 4234 to 4394 16 to 175       160/175
(91 %)
6 diff
(96.6 %id)
AW372516 breast .a 4242 to 4398 182 to 25       158/182
(86 %)
2 diff
(99.0 %id)
AW577037 breast .a 4242 to 4398 162 to 8       155/162
(95 %)
2 diff
(98.8 %id)
BP255867 Kidney .a 4242 to 4810 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
BM925173 pooled lung and spleen .a 4245 to 5288 4 to 1049       1046/1054
(99 %)
21 diff
(98.1 %id)
CF243042 Brain glioblastoma .a 4248 to 5088 1 to 842       842/849
(99 %)
4 diff
(99.6 %id)
AW385535 leiomios .a 4254 to 4398 1 to 145       145/155
(93 %)
2 diff
(98.8 %id)
TI_1959500415   .a 4257 to 5403 1147 to 10       1138/1302
(87 %)
8 diff
(99.4 %id)
BM453236 melanotic melanoma, skin .a 4277 to 5154 1 to 886       886/910
(97 %)
17 diff
(98.2 %id)
BF849784 lung_normal .a 4295 to 4791 495 to 4     Submitted on the opposite strand 492/495
(99 %)
9 diff
(98.2 %id)
BF742414 breast .a 4311 to 4762 19 to 468       450/468
(96 %)
11 diff
(97.7 %id)
CD616486   .a 4341 to 4988 662 to 15       648/662
(97 %)
0 diff
(100 %id)
AA375134 lung .a 4358 to 4650 1 to 294       294/294
(100 %)
2 diff
(99.4 %id)
BQ331899 lung_tumor .a 4364 to 4743 1 to 380       380/380
(100 %)
20 diff
(94.8 %id)
BI087722 cervix .a 4374 to 5087 1 to 714       714/714
(100 %)
1 diff
(99.9 %id)
BF849648 lung_normal .a 4384 to 4668 296 to 12     Submitted on the opposite strand 285/296
(96 %)
1 diff
(99.7 %id)
BE792533 lung, small cell carcinoma .a 4387 to 5154 1 to 762       762/842
(90 %)
8 diff
(99.1 %id)
AI940650 stomach .a 4391 to 4896 25 to 529       505/529
(95 %)
8 diff
(98.5 %id)
CV571984 cornea, eye .a 4400 to 4970 1 to 571       571/571
(100 %)
0 diff
(100 %id)
AW372240 breast .a 4407 to 4968 5 to 564       560/583
(96 %)
11 diff
(98.2 %id)
BU170900 eye, retinoblastoma .a 4418 to 5322 1 to 913       913/934
(97 %)
18 diff
(98.1 %id)
AA312222   .a 4420 to 4744 1 to 325       325/325
(100 %)
0 diff
(100 %id)
CO405528 Chondrosarcoma Lung Metastasis cell lines, lung .a 4443 to 5154 1 to 699       699/747
(93 %)
15 diff
(98.0 %id)
AW605525 denis_drash .a 4444 to 4786 378 to 36       343/378
(90 %)
1 diff
(99.8 %id)
AW605539 denis_drash .a 4444 to 4777 337 to 5       333/337
(98 %)
1 diff
(99.8 %id)
AW939131 denis_drash .a 4444 to 4786 367 to 25     Submitted on the opposite strand 343/367
(93 %)
1 diff
(99.8 %id)
AW939181 denis_drash .a 4444 to 4786 367 to 25     Submitted on the opposite strand 343/367
(93 %)
1 diff
(99.8 %id)
AW939182 denis_drash .a 4444 to 4783 345 to 7     Submitted on the opposite strand 339/345
(98 %)
2 diff
(99.5 %id)
AW939934 denis_drash .a 4444 to 4783 345 to 7     Submitted on the opposite strand 339/345
(98 %)
2 diff
(99.5 %id)
DA266028 caudate nucleus .a 4444 to 5002 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BM728457 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4450 to 5111 1 to 663       663/665
(99 %)
3 diff
(99.6 %id)
BP242429 Liver .a 4453 to 5035 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BF769211 epid_tumor .a 4455 to 5016 576 to 17     Submitted on the opposite strand 560/576
(97 %)
7 diff
(98.8 %id)
BF871078 lung_tumor .a 4456 to 4670 229 to 10     Submitted on the opposite strand 220/239
(92 %)
8 diff
(96.7 %id)
BE873418 adenocarcinoma, colon .a 4476 to 5099 1 to 623       623/626
(99 %)
4 diff
(99.4 %id)
AW996523 breast_normal .a 4483 to 5038 559 to 7     Submitted on the opposite strand 553/559
(98 %)
0 diff
(100 %id)
BF847772 lung_normal .a 4484 to 4776 312 to 16     Submitted on the opposite strand 297/312
(95 %)
8 diff
(97.5 %id)
BE263978 lung, small cell carcinoma .a 4491 to 5148 1 to 654       654/683
(95 %)
8 diff
(98.9 %id)
BE939815 uterus_tumor .a 4499 to 4877 1 to 379       379/383
(98 %)
4 diff
(99.0 %id)
BX480448   .a 4502 to 5071 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BF768497 epid_tumor .a 4512 to 5074 557 to 5     Submitted on the opposite strand 553/558
(99 %)
11 diff
(98.1 %id)
BM793491 Ascites, stomach .a 4522 to 5154 1 to 634       634/638
(99 %)
18 diff
(97.2 %id)
AF070532 brain .a 4534 to 5944 1 to 1411   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1411/1411
(100 %)
0 diff
(100 %id)
BE409942 choriocarcinoma, placenta .a 4534 to 5021 69 to 577       505/826
(61 %)
37 diff
(95.6 %id)
T80488 whole brain .a 4535 to 4912 1 to 384       384/426
(90 %)
16 diff
(96.3 %id)
BQ315123 epid_tumor .a 4547 to 5006 541 to 90       452/541
(83 %)
8 diff
(98.6 %id)
BM700200 eye, lens .a 4549 to 5029 1 to 481     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 481/481
(100 %)
0 diff
(100 %id)
BE710632 head_neck .a 4556 to 5038 11 to 486       479/490
(97 %)
7 diff
(98.6 %id)
BF734470 amnion_normal .a 4559 to 4720 1 to 163       163/184
(88 %)
11 diff
(94.1 %id)
CX868910 embryonic stem .a 4563 to 5323 1 to 761     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 761/761
(100 %)
0 diff
(100 %id)
CD251055 brain, Pituitary .a 4578 to 5441 29 to 899       871/904
(96 %)
21 diff
(97.7 %id)
BF764250 colon_est .a 4597 to 4946 1 to 350       350/350
(100 %)
10 diff
(97.2 %id)
TI_154129204   .a 4601 to 5446 922 to 88   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 835/944
(88 %)
23 diff
(97.6 %id)
DA635343 Kidney .a 4614 to 5189 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
W31805 parathyroid gland, parathyroid tumor .a 4620 to 5049 1 to 437       437/438
(99 %)
13 diff
(97.1 %id)
BF878176 lung_tumor .a 4629 to 4909 281 to 1     Submitted on the opposite strand 281/281
(100 %)
7 diff
(97.6 %id)
F13418 brain, total brain .a 4630 to 4968 1 to 338       338/348
(97 %)
2 diff
(99.5 %id)
BI001081 head_normal .a 4631 to 5053 18 to 439       422/439
(96 %)
9 diff
(98.0 %id)
CA391108 eye, RPE/choroid .a 4644 to 5187 1 to 544       544/544
(100 %)
0 diff
(100 %id)
BF850046 lung_normal .a 4645 to 5032 388 to 1     Submitted on the opposite strand 388/391
(99 %)
1 diff
(99.8 %id)
T85605 liver and spleen .a 4654 to 4914 1 to 262       262/432
(60 %)
3 diff
(99.4 %id)
BQ308992 breast .a 4655 to 4968 1 to 314       314/321
(97 %)
12 diff
(96.3 %id)
R23555 whole brain .a 4657 to 5069 1 to 419     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 417/423
(98 %)
14 diff
(96.7 %id)
T75176 whole brain .a 4659 to 5045 1 to 388     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 388/388
(100 %)
22 diff
(94.4 %id)
BQ014638 Chondrosarcoma, Left Pubic Bone .a 4715 to 5446 750 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 732/732
(100 %)
1 diff
(99.9 %id)
TI_159686232   .a 4717 to 5056 1178 to 829       350/1296
(27 %)
6 diff
(99.6 %id)
BM691272 eye, RPE and Choroid .a 4717 to 5326 15 to 620     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 606/620
(97 %)
8 diff
(98.8 %id)
BM544777 brain, hippocampus .a 4729 to 5803 20 to 1100       1081/1100
(98 %)
38 diff
(96.6 %id)
TI_154106571   .a 4744 to 5446 793 to 93   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 701/702
(99 %)
2 diff
(99.8 %id)
CX786437 human embryonic stem cells .a 4749 to 5570 1 to 822       822/822
(100 %)
0 diff
(100 %id)
CA446850 Chondrosarcoma, Left Pubic Bone .a 4764 to 5446 699 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 681/681
(100 %)
2 diff
(99.8 %id)
CA417814 Chondrosarcoma Cell line .a 4775 to 5446 689 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 671/671
(100 %)
1 diff
(99.9 %id)
BU633126 cell lines, Chondrosarcoma .a 4775 to 5446 688 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 670/670
(100 %)
2 diff
(99.8 %id)
AU134709 placenta .a 4777 to 5463 2 to 694   fully sequenced, capped   693/693
(100 %)
1 diff
(99.9 %id)
BG420015 Kidney, renal cell adenocarcinoma .a 4778 to 5414 1 to 635       635/636
(99 %)
6 diff
(99.1 %id)
BU742236 eye, fetal eye .a 4781 to 5446 683 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 665/665
(100 %)
3 diff
(99.6 %id)
AA310587   .a 4787 to 5195 1 to 411       411/414
(99 %)
4 diff
(99.1 %id)
AA868314   .a 4795 to 5446 666 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 652/665
(98 %)
24 diff
(96.4 %id)
CA305953 Alveolar Macrophage, lung .a 4802 to 5446 663 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 645/645
(100 %)
1 diff
(99.9 %id)
BQ446910 Knee, Osteoarthritic Cartilage .a 4812 to 5446 652 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 634/634
(100 %)
2 diff
(99.7 %id)
BQ448644 Knee, Osteoarthritic Cartilage .a 4821 to 5446 643 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 625/625
(100 %)
3 diff
(99.6 %id)
BU630714 cell lines, Chondrosarcoma .a 4822 to 5446 642 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 624/624
(100 %)
2 diff
(99.7 %id)
CN392115 embryonic stem cells, DMSO-treated H9 cellline .a 4827 to 5433 1 to 607       607/607
(100 %)
2 diff
(99.7 %id)
BF929139 nervous_tumor .a 4849 to 5031 1 to 183       183/183
(100 %)
4 diff
(97.9 %id)
BF932267 nervous_tumor .a 4849 to 5031 1 to 183       183/183
(100 %)
1 diff
(99.5 %id)
AI828649 Prostate .a 4855 to 5446 607 to 16   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 592/593
(99 %)
5 diff
(99.2 %id)
BF873909 lung_tumor .a 4874 to 5052 1 to 179       179/179
(100 %)
0 diff
(100 %id)
BG236436 blood, lymphocyte .a 4875 to 5445 571 to 1       571/571
(100 %)
4 diff
(99.3 %id)
TI_57186405   .a 4886 to 5548 51 to 718       668/668
(100 %)
13 diff
(98.1 %id)
BI855929 breast, mammary adenocarcinoma, cell line .a 4887 to 5548 1 to 667       667/667
(100 %)
13 diff
(98.1 %id)
T27282   .a 4894 to 5098 1 to 207       207/207
(100 %)
4 diff
(98.1 %id)
BE391996 endometrium, adenocarcinoma cell line, uterus .a 4894 to 5490 1 to 599       599/599
(100 %)
4 diff
(99.4 %id)
DB382749   .a 4894 to 5446 550 to 1       550/550
(100 %)
13 diff
(97.7 %id)
AI494567 B-cell, chronic lymphotic leukemia .a 4898 to 5447 543 to 3       541/612
(88 %)
14 diff
(97.8 %id)
AA972981 pooled .a 4926 to 5446 532 to 13   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 520/520
(100 %)
20 diff
(96.2 %id)
CO405718 Chondrosarcoma Lung Metastasis cell lines, lung .a 4932 to 5644 14 to 720       707/753
(93 %)
40 diff
(94.7 %id)
BE931294 head_neck .a 4936 to 5077 35 to 176       142/176
(80 %)
10 diff
(94.4 %id)
AI127150 heart .a 4956 to 5276 321 to 1       321/321
(100 %)
0 diff
(100 %id)
AU143825 whole embryo, mainly head .a 5032 to 5446 414 to 1       414/414
(100 %)
7 diff
(98.4 %id)
AA159061 Pancreas .a 5079 to 5447 370 to 4       367/370
(99 %)
1 diff
(99.8 %id)
BU737921 eye, lens .a 5085 to 5446 381 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 363/363
(100 %)
5 diff
(98.7 %id)
CX868846 embryonic stem .a 5326 to 5942 643 to 27   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 617/617
(100 %)
2 diff
(99.7 %id)
AU149383   .a 5378 to 5944 563 to 1       563/580
(97 %)
10 diff
(98.3 %id)
AU158604 placenta .a 5388 to 5944 557 to 1       557/560
(99 %)
8 diff
(98.6 %id)
BU726457 eye, RPE and Choroid .a 5390 to 5951 580 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 562/562
(100 %)
0 diff
(100 %id)
AU158698 placenta .a 5391 to 5944 553 to 1       553/562
(98 %)
7 diff
(98.8 %id)
DB383650   .a 5394 to 5944 546 to 1       546/549
(99 %)
22 diff
(96.0 %id)
DB382996   .a 5400 to 5951 552 to 1       552/557
(99 %)
6 diff
(99.0 %id)
DB382762   .a 5402 to 5951 561 to 2       560/561
(99 %)
0 diff
(100 %id)
DB372442 placenta .a 5433 to 5944 505 to 1   fully sequenced,   505/505
(100 %)
16 diff
(96.9 %id)
AU158720 placenta .a 5450 to 5944 495 to 1       495/495
(100 %)
1 diff
(99.8 %id)
AU147008 whole embryo, mainly body .a 5477 to 5943 467 to 1       467/467
(100 %)
0 diff
(100 %id)
R44306 whole brain .a 5571 to 5944 392 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 375/428
(87 %)
2 diff
(99.6 %id)
R38625 whole brain .a 5602 to 5944 354 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 338/338
(100 %)
12 diff
(96.5 %id)
T83581 liver and spleen .a 5625 to 5943 321 to 1       321/323
(99 %)
5 diff
(98.5 %id)
R38847 whole brain .a 5645 to 5945 308 to 8       301/308
(97 %)
0 diff
(100 %id)
F08860 brain, total brain .a 5656 to 5944 289 to 1       289/289
(100 %)
0 diff
(100 %id)
W04703 parathyroid gland, parathyroid tumor .a 5740 to 5945 213 to 7       207/213
(97 %)
0 diff
(100 %id)
U46691   .b 1 to 5901 684 to 6581 P2G G3H L4P G5K E6L ... tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 5898/6581
(89 %)
14 diff
(99.8 %id)
AW148762 brain, tumor, 5 pooled (see description) .b 5105 to 5403 322 to 23   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 300/363
(82 %)
12 diff
(96.7 %id)
TI_154110365   .b 5106 to 5908 876 to 83   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 794/934
(85 %)
15 diff
(98.4 %id)
AI699158 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 5110 to 5403 330 to 38   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 293/308
(95 %)
21 diff
(93.2 %id)
AI824442 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 5125 to 5404 282 to 3       280/382
(73 %)
0 diff
(100 %id)
BG420331 Kidney, renal cell adenocarcinoma .b 5125 to 5851 1 to 720   AAA   720/765
(94 %)
19 diff
(97.6 %id)
CA314254 Human Lung Epithelial cells, lung .b 5147 to 5901 772 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 754/754
(100 %)
4 diff
(99.5 %id)
CA448105 Chondrosarcoma, Left Pubic Bone .b 5147 to 5908 775 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 757/759
(99 %)
6 diff
(99.3 %id)
BF530528 anaplastic oligodendroglioma with 1p/19qloss, brain .b 5230 to 5888 1 to 651       651/674
(96 %)
17 diff
(97.5 %id)
C20795   .b 5288 to 5403 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
CB160981 Liver .b 5297 to 5817 1 to 521       521/521
(100 %)
0 diff
(100 %id)
BU857632 adenocarcinoma, cell line, breast .b 5310 to 5901 1 to 592   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 592/592
(100 %)
0 diff
(100 %id)
T73040 Liver .b 5316 to 5623 1 to 314       314/319
(98 %)
9 diff
(97.2 %id)
TI_1959498224   .b 5321 to 5601 605 to 325       281/281
(100 %)
1 diff
(99.7 %id)
TI_154072797   .b 5327 to 5901 639 to 64   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 576/656
(87 %)
38 diff
(94.3 %id)
AI392835 B-cell, chronic lymphotic leukemia .b 5377 to 5901 525 to 1       525/525
(100 %)
0 diff
(100 %id)
AI571787 anaplastic oligodendroglioma, brain .b 5378 to 5901 524 to 1       524/524
(100 %)
3 diff
(99.5 %id)
BU783508 insulinoma, Pancreas .b 5381 to 5893 515 to 3     Submitted on the opposite strand 513/515
(99 %)
0 diff
(100 %id)
CA430519 Cell Line, Chondrosarcoma .b 5383 to 5901 537 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 519/519
(100 %)
6 diff
(98.9 %id)
BF055076 pooled .b 5400 to 5902 508 to 5       504/508
(99 %)
0 diff
(100 %id)
BP391917 pancreatic islet .b 5402 to 5901 1 to 500     Submitted on the opposite strand 500/500
(100 %)
0 diff
(100 %id)
AI693188 carcinoid, lung .b 5412 to 5900 489 to 1       489/489
(100 %)
0 diff
(100 %id)
AW131486 brain, medulloblastoma .b 5414 to 5895 504 to 23   AAA   482/488
(98 %)
0 diff
(100 %id)
AA836688 germinal center B cell .b 5417 to 5902 499 to 14       486/499
(97 %)
0 diff
(100 %id)
AI766647 B-cell, chronic lymphotic leukemia .b 5418 to 5902 485 to 1       485/485
(100 %)
0 diff
(100 %id)
BQ680896 melanotic melanoma, cell line, skin .b 5420 to 5901 4 to 485   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 482/485
(99 %)
6 diff
(98.8 %id)
BQ015805 lung, Metastatic Chondrosarcoma .b 5422 to 5901 498 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 480/480
(100 %)
1 diff
(99.8 %id)
AA022518 heart .b 5424 to 5901 486 to 1       486/489
(99 %)
8 diff
(98.4 %id)
BM042010 melanotic melanoma, cell line, skin .b 5427 to 5901 1 to 473   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 473/473
(100 %)
3 diff
(99.4 %id)
BQ877713 melanotic melanoma, cell line, skin .b 5430 to 5901 1 to 472   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
BU174003 melanotic melanoma, cell line, skin .b 5430 to 5901 1 to 472   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
BU838994 melanotic melanoma, cell line, skin .b 5430 to 5901 1 to 472       472/960
(49 %)
6 diff
(99.4 %id)
BQ682210 melanotic melanoma, cell line, skin .b 5430 to 5901 1 to 472   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
BQ676248 melanotic melanoma, cell line, skin .b 5430 to 5901 1 to 472   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
BU191417 melanotic melanoma, cell line, skin .b 5434 to 5902 1 to 469       469/486
(96 %)
6 diff
(98.8 %id)
BE671671 carcinoid, lung .b 5435 to 5899 469 to 5       465/469
(99 %)
0 diff
(100 %id)
T94629 lung .b 5436 to 5781 1 to 357       357/371
(96 %)
14 diff
(96.3 %id)
AA617887 lung, lung tumor .b 5436 to 5902 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
BE042947 carcinoid, lung .b 5440 to 5900 461 to 1       461/461
(100 %)
0 diff
(100 %id)
N57547 multiple sclerosis lesions .b 5442 to 5901 461 to 1       461/465
(99 %)
2 diff
(99.6 %id)
BM696118 eye, human retina .b 5456 to 5522 1 to 67   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 67/67
(100 %)
0 diff
(100 %id)
N47006 multiple sclerosis lesions .b 5467 to 5901 441 to 1       441/441
(100 %)
6 diff
(98.7 %id)
BI000907 head_normal .b 5491 to 5646 173 to 19       155/182
(85 %)
0 diff
(100 %id)
AI298230 carcinoid, lung .b 5491 to 5902 413 to 2       412/413
(99 %)
0 diff
(100 %id)
AI478297 Kidney .b 5492 to 5902 418 to 8       411/418
(98 %)
0 diff
(100 %id)
BM664403 eye, human retina .b 5492 to 5901 428 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 410/410
(100 %)
1 diff
(99.8 %id)
AA373676 lung .b 5497 to 5781 1 to 285       285/285
(100 %)
0 diff
(100 %id)
AW954360   .b 5498 to 5866 1 to 369       369/416
(88 %)
25 diff
(94.0 %id)
AW338170 brain, three pooled meningiomas .b 5502 to 5901 400 to 1       400/400
(100 %)
0 diff
(100 %id)
BF880903 lung_tumor .b 5510 to 5659 32 to 182       151/182
(82 %)
6 diff
(96.8 %id)
BM727344 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 5510 to 5901 1 to 392       392/392
(100 %)
0 diff
(100 %id)
BM727345 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 5510 to 5724 1 to 215   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 215/215
(100 %)
0 diff
(100 %id)
BX094633 whole brain .b 5517 to 5900 400 to 16   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 385/387
(99 %)
1 diff
(99.8 %id)
BG055850 anaplastic oligodendroglioma, brain .b 5523 to 5902 385 to 6       380/385
(98 %)
0 diff
(100 %id)
AA651625 normal prostate, Prostate .b 5524 to 5914 392 to 2       391/392
(99 %)
0 diff
(100 %id)
AW028556 fibrotheoma, ovary .b 5525 to 5901 389 to 13   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 377/379
(99 %)
3 diff
(99.3 %id)
AI089571 uterus .b 5526 to 5901 396 to 21   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 376/376
(100 %)
0 diff
(100 %id)
AI434110 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 5529 to 5901 387 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 373/373
(100 %)
0 diff
(100 %id)
AI440151 lymph node, lymphoma, follicular mixed small and largecell .b 5535 to 5902 368 to 1       368/368
(100 %)
5 diff
(98.7 %id)
AA569944 breast .b 5544 to 5902 361 to 3       359/361
(99 %)
0 diff
(100 %id)
BM992472 Bone, Subchondral Bone .b 5551 to 5901 369 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 351/356
(98 %)
0 diff
(100 %id)
BM687100 eye, optic nerve .b 5557 to 5900 1 to 344       344/344
(100 %)
5 diff
(98.6 %id)
AW088653 ovary, tumor, 5 pooled (see description) .b 5566 to 5911 346 to 1       346/346
(100 %)
0 diff
(100 %id)
R85545 brain .b 5568 to 5902 335 to 1       335/335
(100 %)
2 diff
(99.5 %id)
AI719029 colon .b 5568 to 5900 333 to 1       333/333
(100 %)
3 diff
(99.1 %id)
TI_154072769   .b 5572 to 5901 390 to 61   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 330/656
(50 %)
2 diff
(99.7 %id)
AI167732 senescent fibroblast .b 5600 to 5901 319 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 302/302
(100 %)
2 diff
(99.4 %id)
AI813841 normal prostate, Prostate .b 5609 to 5901 293 to 1       293/293
(100 %)
0 diff
(100 %id)
AW291902   .b 5618 to 5901 301 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 284/298
(95 %)
0 diff
(100 %id)
AI863605 Kidney .b 5642 to 5901 271 to 12   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 260/261
(99 %)
1 diff
(99.7 %id)
AA535419 colon .b 5645 to 5902 262 to 6       257/262
(98 %)
0 diff
(100 %id)
BF337841 brain, glioblastoma with EGFR amplification .b 5652 to 5901 1 to 253   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 253/253
(100 %)
3 diff
(98.9 %id)
AI928478 Kidney .b 5658 to 5901 244 to 1       244/244
(100 %)
0 diff
(100 %id)
AI204422   .b 5686 to 5902 220 to 4       217/220
(98 %)
0 diff
(100 %id)
BM681723 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 5694 to 5901 226 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 208/208
(100 %)
2 diff
(99.1 %id)
BE301140 Kidney, renal cell adenocarcinoma .b 5815 to 5902 91 to 4       88/92
(95 %)
0 diff
(100 %id)
BF838920 head_neck .c -8 to 446 1 to 455   tiling clone,   455/455
(100 %)
8 diff
(98.3 %id)
BQ361602 ovary .c 1 to 108 21 to 128       110/128
(85 %)
6 diff
(95.4 %id)
CU442816 epidermis .c 27 to 681 20 to 674   tiling clone,   655/674
(97 %)
11 diff
(98.4 %id)
CB123617 Liver .c 571 to 1202 1 to 632   tiling clone,   632/632
(100 %)
0 diff
(100 %id)
TI_227713644   .c 910 to 1893 1062 to 87   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 976/1013
(96 %)
28 diff
(97.3 %id)
TI_1959503203   .c 914 to 1800 1003 to 116       888/1275
(69 %)
23 diff
(98.2 %id)
AW874264 tumor, uterus .c 914 to 1395 516 to 35   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 482/494
(97 %)
18 diff
(96.4 %id)
AI682072 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 920 to 1396 477 to 1       477/477
(100 %)
5 diff
(99.0 %id)
AW512275 lymph node, lymphoma, follicular mixed small and largecell .c 920 to 1396 479 to 3       477/479
(99 %)
4 diff
(99.2 %id)
CD387774 embryonic trophoblasts, made from WA01 stemcells .c 953 to 1799 23 to 873       851/879
(96 %)
18 diff
(98.0 %id)
BM987452 mixed .c 990 to 1395 424 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 406/406
(100 %)
3 diff
(99.3 %id)
AW373496 breast .c 994 to 1289 297 to 7       291/297
(97 %)
0 diff
(100 %id)
BG117380 adenocarcinoma, cell line, Liver .c 1029 to 1703 1 to 681       681/1063
(64 %)
22 diff
(98.0 %id)
BU502432 mixed (pool of 40 RNAs) .c 1038 to 1850 1 to 816       816/817
(99 %)
30 diff
(96.4 %id)
TI_1959498226   .c 1041 to 1592 886 to 327       560/565
(99 %)
30 diff
(94.7 %id)
BM988386 lung, Metastatic Chondrosarcoma .c 1041 to 1395 373 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 355/355
(100 %)
0 diff
(100 %id)
CD742657 Alveolar Macrophage, lung .c 1084 to 1893 828 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 810/810
(100 %)
7 diff
(99.2 %id)
AW375017 colon .d 1 to 534 25 to 557 A2P N3I P4L A5Q G6D ... tiling clone,   540/557
(96 %)
12 diff
(97.9 %id)
DA126310 cerebellum .e 1 to 599 2 to 601   tiling clone, capped   600/600
(100 %)
1 diff
(99.9 %id)
DA337988 hippocampus .e 104 to 675 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
AK126585 cerebellum .e 163 to 2131 1 to 1969 exact tiling clone, available from FLJ,   1969/1969
(100 %)
1 diff
(100.0 %id)
DA067460 cerebellum .e 164 to 736 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
TI_44384877   .e 255 to 917 43 to 704       662/665
(99 %)
7 diff
(99.0 %id)
BI554192 anaplastic oligodendroglioma with 1p/19qloss, brain .e 257 to 917 1 to 660       660/663
(99 %)
7 diff
(99.0 %id)
BP332934 salivary gland .e 574 to 1155 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BP292370 lung .e 759 to 1340 1 to 582       582/582
(100 %)
17 diff
(97.1 %id)
BI009653 kidney_tumor .e 812 to 1313 546 to 45       502/546
(91 %)
1 diff
(99.9 %id)
DB297345 cerebellum .e 1582 to 2131 550 to 1       550/550
(100 %)
1 diff
(99.9 %id)
AA587256 larynx .e 1743 to 2202 1 to 460   tiling clone, Submitted on the opposite strand 460/460
(100 %)
2 diff
(99.6 %id)
BG474291 eye, retinoblastoma .f 1 to 680 1 to 691   tiling clone,   690/691
(99 %)
40 diff
(94.3 %id)
BG472062 eye, retinoblastoma .f 2 to 691 1 to 679 A20E Y22V C23V E24* tiling clone,   679/680
(99 %)
31 diff
(95.5 %id)
BP251078 hippocampus .g 1 to 578 1 to 578   tiling clone,   578/581
(99 %)
4 diff
(99.4 %id)
DA165529 amygdala .g 321 to 724 184 to 587 E54K tiling clone, capped   404/587
(68 %)
7 diff
(98.9 %id)
BI013339 lung_tumor .h-u 1 to 466 466 to 2 F8C I42V V54C S55E R56P ... tiling clone,   465/466
(99 %)
0 diff
(100 %id)
CN483243 eye .h-u 53 to 574 1 to 522   tiling clone,   522/522
(100 %)
3 diff
(99.5 %id)
BG315487   .h-u 258 to 525 1 to 268       268/268
(100 %)
2 diff
(99.3 %id)
CV416841 head_normal .h-u 279 to 626 355 to 8   tiling clone, Submitted on the opposite strand 348/358
(97 %)
0 diff
(100 %id)
BP334596 salivary gland .i 1 to 583 1 to 583 T2P tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
BQ319323 colon .j 1 to 446 458 to 14 S79V Q80R I81Y L82* tiling clone,   445/469
(94 %)
1 diff
(99.8 %id)
AA987766 carcinoid, lung .k 1 to 222 1 to 222   tiling clone, Submitted on the opposite strand 222/223
(99 %)
2 diff
(99.2 %id)
AA927897 pooled .k 162 to 643 480 to 1       480/480
(100 %)
2 diff
(99.6 %id)
AA769268 germinal center B cell .k 195 to 644 457 to 9 exact tiling clone,   449/457
(98 %)
1 diff
(99.8 %id)
BF981314 duodenal adenocarcinoma, cell line, small intestine .l 1 to 548 1 to 555 exact tiling clone,   555/1075
(51 %)
32 diff
(97.1 %id)
CN281936 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 449 to 955 1 to 507   tiling clone,   507/507
(100 %)
3 diff
(99.5 %id)
DA947947 Spleen .m-u 1 to 552 2 to 555   tiling clone, capped   554/554
(100 %)
2 diff
(99.7 %id)
DB107608 thymus .m-u 336 to 900 2 to 566 exact tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
BP214870 corpus callosum .n 1 to 581 1 to 581 exact tiling clone,   581/581
(100 %)
0 diff
(100 %id)
DA186677 amygdala .o 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
AW361078 colon .p-u 1 to 426 426 to 1 exact tiling clone,   426/426
(100 %)
2 diff
(99.6 %id)
AI940635 stomach Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
AL833607 human endometrium carcinoma cell line Gene SUPT6H, variant not shown       available from DKFZ, AAA This clone was ignored    
BF804746 colon_ins Gene SUPT6H, variant not shown         This clone was ignored    
BF985448 placenta_normal Gene SUPT6H, variant not shown              
BQ310438 breast Gene SUPT6H, variant not shown         This clone was ignored    
BQ326847 colon_normal Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
BQ326862 colon_normal Gene SUPT6H, variant not shown         This clone was ignored    
DB304383 brain Gene SUPT6H, variant not shown              
DA210905 brain Gene SUPT6H, variant not shown       capped      
CR743089 B-cell, chronic lymphotic leukemia Gene SUPT6H, variant not shown         This clone was ignored    
BX491848   Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
GD160468   Gene SUPT6H, variant not shown         Submitted on the opposite strand    
GD160498   Gene SUPT6H, variant not shown         Submitted on the opposite strand    
DB318397   Gene SUPT6H, variant not shown              
DA552414   Gene SUPT6H, variant not shown       capped      
AA085805 colon, tumor Gene SUPT6H, variant not shown       fully sequenced,      
AA085902 colon, tumor Gene SUPT6H, variant not shown       fully sequenced,      
AW207445   Gene SUPT6H, variant not shown         This clone was ignored    
BG054762 brain, glioblastoma (pooled) Gene SUPT6H, variant not shown         This clone was ignored    
BE901816 choriocarcinoma, placenta Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
BF689459 melanotic melanoma, high MDR (cell line), skin Gene SUPT6H, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BF690397 melanotic melanoma, high MDR (cell line), skin Gene SUPT6H, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BG421033 Kidney, renal cell adenocarcinoma Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
BG468427 adenocarcinoma cell line, colon Gene SUPT6H, variant not shown         This clone was ignored    
BG766964 melanotic melanoma, high MDR (cell line), skin Gene SUPT6H, variant not shown         This clone was ignored    
BC033074 Skin, melanotic melanoma, high MDR. Gene SUPT6H, variant not shown       available from MGC, AAA Suspected internal deletion, suspected internal deletion, this clone was ignored    
BG768092 melanotic melanoma, high MDR (cell line), skin Gene SUPT6H, variant not shown       available from MGC, This clone was ignored    
BM994048 lung, Metastatic Chondrosarcoma Gene SUPT6H, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CA943585 Pancreas, Purified pancreatic islet Gene SUPT6H, variant not shown              
BU929357 placenta Gene SUPT6H, variant not shown       AAA      
AU152133   Gene SUPT6H, variant not shown         Suspected internal deletion, this clone was ignored    
AU130111   Gene SUPT6H, variant not shown       capped Suspected internal deletion, this clone was ignored    
BM792576 Ascites, stomach Gene SUPT6H, variant not shown              
DA943451 Spleen Gene SUPT6H, variant not shown       capped      
TI_149304171   Gene SUPT6H, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_227714014   Gene SUPT6H, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB851127 lung, Primary Lung Cystic Fibrosis EpithelialCells Gene SUPT6H, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CD364746 Alveolar Macrophage, lung Gene SUPT6H, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l, .m-u, .n, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI