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Gene SUMF1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
307 supporting clones for gene SUMF1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB448737   .a -8 to 2122 1 to 2127 exact     2127/2127
(100 %)
9 diff
(99.6 %id)
BC110862 Colon, Kidney, Stomach, adult, whole pooled .a -8 to 2122 1 to 2131 exact tiling clone, AAA   2131/2131
(100 %)
3 diff
(99.9 %id)
AY208752   .a 1 to 1124 2 to 1125 exact     1125/1125
(100 %)
1 diff
(100.0 %id)
AY323910   .a 1 to 1124 2 to 1125 exact     1125/1125
(100 %)
1 diff
(100.0 %id)
AK075459 placenta .a 270 to 2114 290 to 2130 F123L E263D     2130/2130
(100 %)
12 diff
(99.5 %id)
BC121122 PCR rescued clones .a 270 to 1159 300 to 1189 exact     1189/1189
(100 %)
6 diff
(99.5 %id)
NM_182760.3   .a 270 to 2123 308 to 2161 exact RefSeq, AAA   2161/2161
(100 %)
0 diff
(100 %id)
BG823861 adenocarcinoma cell line, colon .a 389 to 1270 1 to 873       873/876
(99 %)
29 diff
(96.7 %id)
CR615481 Placenta Cot 25-normalized .a 457 to 2105 1 to 1649   tiling clone,   1649/1649
(100 %)
0 diff
(100 %id)
BX381448 Placenta Cot 25-normalized .a 457 to 1280 1 to 814   fully sequenced,   814/814
(100 %)
4 diff
(99.6 %id)
BX381447 Placenta Cot 25-normalized .a 1250 to 2105 842 to 1   fully sequenced,   842/842
(100 %)
0 diff
(100 %id)
BX354501 Neuroblastoma Cot 25-normalized .b -8 to 876 1 to 880       880/880
(100 %)
13 diff
(98.6 %id)
DC298512 adrenal gland .b 1 to 544 8 to 551   tiling clone,   551/551
(100 %)
0 diff
(100 %id)
AK302018 testis .b 1 to 1427 7 to 1433 G111E tiling clone,   1433/1433
(100 %)
6 diff
(99.6 %id)
DC396806 testis .b 1 to 571 7 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC411863 kidney, tumor tissue .b 1 to 570 7 to 576       576/576
(100 %)
2 diff
(99.7 %id)
BE745592 adenocarcinoma cell line, ovary .b 9 to 655 1 to 666       664/801
(82 %)
27 diff
(96.7 %id)
DC355700   .b 83 to 649 1 to 567       567/568
(99 %)
0 diff
(100 %id)
NM_001164674.1   .b 270 to 2048 308 to 2086 exact RefSeq, AAA   2086/2086
(100 %)
0 diff
(100 %id)
DC387909 small intestine .b 270 to 542 290 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC389635 Spleen .b 270 to 580 291 to 601       601/601
(100 %)
3 diff
(99.6 %id)
BU839183 melanotic melanoma, cell line, skin .b 355 to 721 1 to 374       374/782
(47 %)
7 diff
(99.2 %id)
BQ683180 melanotic melanoma, cell line, skin .b 355 to 1200 1 to 858   tiling clone,   858/863
(99 %)
27 diff
(96.9 %id)
BG180689 adenocarcinoma, cell line, Prostate .b 648 to 1200 25 to 606   available from MGC,   582/1111
(52 %)
42 diff
(96.3 %id)
BC017005 Prostate, adenocarcinoma. .b 649 to 2047 1 to 1399   tiling clone, available from MGC, AAA   1399/1399
(100 %)
3 diff
(99.8 %id)
BF883899 lung_tumor .b 664 to 1128 463 to 1     Submitted on the opposite strand 463/463
(100 %)
3 diff
(99.4 %id)
BU526499 epidermoid carcinoma, cell line, lung .b 791 to 1689 1 to 905       905/942
(96 %)
14 diff
(98.6 %id)
FN141942 breast carcinoma .b 870 to 982 113 to 1     Submitted on the opposite strand 113/113
(100 %)
0 diff
(100 %id)
BX354500 Neuroblastoma Cot 25-normalized .b 985 to 2025 1031 to 1   tiling clone,   1031/1031
(100 %)
56 diff
(94.6 %id)
BM924237 pooled colon, kidney, stomach .c -8 to 958 9 to 987       979/1068
(91 %)
37 diff
(96.6 %id)
BX379410 Placenta Cot 25-normalized .c 1 to 953 9 to 957   tiling clone,   957/957
(100 %)
4 diff
(99.6 %id)
DA589238 lung .c 1 to 448 8 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DN998678 bone marrow .c 1 to 678 5 to 682       682/682
(100 %)
3 diff
(99.6 %id)
BX394738 Neuroblastoma Cot 25-normalized .c 1 to 841 2 to 842       842/842
(100 %)
3 diff
(99.7 %id)
BG766444 melanotic melanoma, high MDR (cell line), skin .c 15 to 875 1 to 855       855/855
(100 %)
14 diff
(98.4 %id)
DA476531   .c 24 to 590 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
DA905025   .c 25 to 588 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BX342031   .c 29 to 444 1 to 417       417/417
(100 %)
7 diff
(98.4 %id)
BE271837 adenocarcinoma cell line, ovary .c 29 to 745 1 to 721       721/743
(97 %)
13 diff
(98.3 %id)
DB260747 uterus .c 29 to 574 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA049780   .c 31 to 574 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BM807001 duodenal adenocarcinoma, cell line, small intestine .c 33 to 928 30 to 936       907/1059
(85 %)
27 diff
(97.5 %id)
BI769971 pooled lung and spleen .c 38 to 191 1 to 153       153/153
(100 %)
1 diff
(99.4 %id)
TI_57183395   .c 38 to 736 39 to 733       695/733
(94 %)
9 diff
(98.8 %id)
AV721846 hypothalamus .c 213 to 825 1 to 610       610/610
(100 %)
5 diff
(99.2 %id)
AY358092   .c 270 to 3133 288 to 3151 D328H tiling clone,   3151/3151
(100 %)
5 diff
(99.9 %id)
DB249731 uterus .c 270 to 448 288 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
BX349149   .c 302 to 953 1 to 654       654/654
(100 %)
3 diff
(99.6 %id)
BM505710 insulinoma, Pancreas .c 341 to 796 95 to 550       456/551
(82 %)
13 diff
(97.7 %id)
DA663366   .c 380 to 943 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
EC466091 Prostate .c 399 to 493 1 to 95       95/95
(100 %)
8 diff
(91.6 %id)
BF759917 colon .c 2218 to 2563 350 to 9   tiling clone, Submitted on the opposite strand 342/350
(97 %)
0 diff
(100 %id)
BX338013 Placenta Cot 25-normalized .d -11 to 841 1 to 852       852/852
(100 %)
3 diff
(99.7 %id)
DA049748   .d -9 to 520 2 to 531   capped   530/534
(99 %)
3 diff
(99.5 %id)
DA052647   .d -9 to 552 2 to 565   capped   564/564
(100 %)
6 diff
(99.0 %id)
BM471268 melanotic melanoma, skin .d -8 to 840 1 to 848       848/1025
(82 %)
14 diff
(98.7 %id)
DA302278 hippocampus .d 1 to 579 10 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
BX403255 Placenta Cot 25-normalized .d 1 to 841 9 to 852       852/852
(100 %)
16 diff
(98.2 %id)
DA561611 heart .d 1 to 571 10 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA207648 brain .d 1 to 555 9 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA562241 heart .d 1 to 564 9 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA972715 synovial membrane tissue from rheumatioidarthritis .d 1 to 566 9 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA074103 cerebellum .d 1 to 564 8 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA450499 tongue, tumor tissue .d 1 to 519 8 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA475513   .d 1 to 548 8 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA549646   .d 1 to 520 8 to 527   capped   526/565
(93 %)
2 diff
(99.7 %id)
DA566483 heart .d 1 to 553 8 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA566490 heart .d 1 to 550 8 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA702722   .d 1 to 462 8 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DA707660   .d 1 to 581 8 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA736366   .d 1 to 665 8 to 673   tiling clone, capped   672/677
(99 %)
2 diff
(99.8 %id)
DA999217 breast, tumor tissue .d 1 to 548 8 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DB000262 breast, tumor tissue .d 1 to 536 8 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DB111501 thymus .d 1 to 571 8 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB252017 uterus .d 1 to 572 8 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA051954   .d 1 to 545 7 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA428535 colon .d 1 to 562 7 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA633572 Kidney .d 1 to 566 7 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA657715   .d 1 to 514 7 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA663285   .d 1 to 215 7 to 221   capped   220/220
(100 %)
0 diff
(100 %id)
DA711918   .d 1 to 558 7 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA908522   .d 1 to 543 7 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA918551 small intestine .d 1 to 551 7 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA979928 synovial membrane tissue from rheumatioidarthritis .d 1 to 559 7 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA983967 synovial membrane tissue from rheumatioidarthritis .d 1 to 325 7 to 331   capped   330/330
(100 %)
0 diff
(100 %id)
DA462341 cord Blood .d 1 to 843 6 to 845   capped   844/847
(99 %)
15 diff
(98.3 %id)
DA018044 adrenal gland .d 1 to 566 5 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA200319 brain .d 1 to 572 5 to 580   capped   579/579
(100 %)
6 diff
(99.0 %id)
DA344836 substantia nigra .d 1 to 556 5 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA471641   .d 1 to 519 5 to 526   capped   525/525
(100 %)
5 diff
(99.1 %id)
DA628867 Kidney .d 1 to 576 5 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA679385   .d 1 to 546 5 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA696002   .d 1 to 565 5 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA697813   .d 1 to 566 5 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA713974   .d 1 to 565 5 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA877807 Prostate .d 1 to 561 5 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA937843 Spleen .d 1 to 570 5 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA946276 Spleen .d 1 to 541 5 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA962054 Spleen .d 1 to 552 5 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB034334 testis .d 1 to 571 5 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB110184 thymus .d 1 to 570 5 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB185228 liver, tumor tissue .d 1 to 575 5 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BX403295 Neuroblastoma Cot 25-normalized .d 1 to 522 2 to 524       522/535
(97 %)
17 diff
(96.9 %id)
DA010034 adrenal gland .d 1 to 553 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BF725507 eye, Iris .d 2 to 527 1 to 526       526/526
(100 %)
0 diff
(100 %id)
BX354887 Neuroblastoma Cot 25-normalized .d 2 to 946 1 to 941       941/945
(99 %)
11 diff
(98.9 %id)
CN289475 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 9 to 147 1 to 139       139/142
(97 %)
1 diff
(99.3 %id)
DA005565   .d 270 to 544 293 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA022432   .d 270 to 543 290 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA033729   .d 270 to 548 306 to 584   capped   565/583
(96 %)
6 diff
(99.0 %id)
BC121123 PCR rescued clones .d 270 to 1099 300 to 1129 V29A tiling clone,   1129/1129
(100 %)
7 diff
(99.4 %id)
DA155028 amygdala .d 270 to 443 296 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DA178172 amygdala .d 270 to 495 290 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA275571 corpus callosum .d 270 to 444 291 to 465   capped   464/474
(97 %)
5 diff
(99.0 %id)
DA287089 corpus callosum .d 270 to 536 290 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA298256 hippocampus .d 270 to 547 295 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA308569 hippocampus .d 270 to 525 293 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA358702 subthalamic nucleus .d 270 to 545 288 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BX403708 placenta .d 270 to 951 285 to 963       963/963
(100 %)
11 diff
(98.9 %id)
DA466389   .d 270 to 547 290 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA476710   .d 270 to 553 290 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB472654 hippocampus .d 270 to 468 295 to 493       493/493
(100 %)
3 diff
(99.4 %id)
DA542649   .d 270 to 749 290 to 765   capped   764/765
(99 %)
9 diff
(98.9 %id)
DA543951   .d 270 to 328 290 to 348   capped   347/347
(100 %)
1 diff
(99.8 %id)
DA550258   .d 270 to 533 307 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA566964 heart .d 270 to 444 290 to 464   capped   463/471
(98 %)
2 diff
(99.6 %id)
DA573760   .d 270 to 468 290 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DA574046   .d 270 to 519 307 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA574377   .d 270 to 528 293 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA578103   .d 270 to 556 290 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA580895   .d 270 to 538 290 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA599065   .d 270 to 534 288 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA600970   .d 270 to 548 289 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BG705404 brain, hippocampus .d 270 to 757 301 to 786       786/787
(99 %)
12 diff
(98.5 %id)
BG705133.
matches multiple genes
brain, Brain, hippocampus, hippocampus .d 270 to 786 302 to 813   available from MGC, also hits gene toysworbu 813/827
(98 %)
32 diff
(96.2 %id)
DA621513 Kidney .d 270 to 535 290 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA624936 Kidney .d 270 to 519 295 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA628294 Kidney .d 270 to 522 290 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA637397 Liver .d 270 to 523 295 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA650307   .d 270 to 521 299 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA655117   .d 270 to 540 299 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
NM_001164675.1   .d 270 to 2063 308 to 2101   RefSeq, AAA   2101/2101
(100 %)
0 diff
(100 %id)
DA681510 ovary .d 270 to 501 297 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DA688205   .d 270 to 524 290 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA700571   .d 270 to 416 296 to 442   capped   441/443
(99 %)
1 diff
(99.8 %id)
DA705753   .d 270 to 443 290 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA708291   .d 270 to 560 296 to 586   capped   585/585
(100 %)
7 diff
(98.9 %id)
DA709984   .d 270 to 516 290 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA713026   .d 270 to 531 292 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA760799 tongue .d 270 to 572 290 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA813954   .d 270 to 530 290 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA831827 placenta .d 270 to 667 290 to 691   capped   688/693
(99 %)
9 diff
(98.8 %id)
DA844846 placenta .d 270 to 515 308 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA845986 placenta .d 270 to 530 299 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA883801   .d 270 to 540 291 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA909737   .d 270 to 560 292 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA911561   .d 270 to 462 290 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
DA911619   .d 270 to 541 290 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA914928   .d 270 to 514 290 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA920284 small intestine .d 270 to 550 289 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA922103 small intestine .d 270 to 528 290 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA946313 Spleen .d 270 to 530 291 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA965797 stomach .d 270 to 545 290 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA984180 synovial membrane tissue from rheumatioidarthritis .d 270 to 536 291 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB011356 colon, tumor tissue .d 270 to 514 292 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
DB033331 testis .d 270 to 555 290 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB053466 testis .d 270 to 556 290 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB103212 thymus .d 270 to 528 290 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DB110227 thymus .d 270 to 555 290 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB169371 kidney, tumor tissue .d 270 to 530 296 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DB177623 kidney, tumor tissue .d 270 to 528 297 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB202740 trachea .d 270 to 558 295 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB255409 uterus .d 270 to 575 288 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DB259658 uterus .d 270 to 556 290 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
BX354886 Neuroblastoma Cot 25-normalized .d 1081 to 1446 380 to 17   tiling clone,   364/430
(84 %)
0 diff
(100 %id)
BX453904 placenta .d 1149 to 2060 914 to 1   tiling clone,   914/915
(99 %)
27 diff
(97.1 %id)
DB368833   .d 1473 to 2062 584 to 1   tiling clone,   584/590
(98 %)
12 diff
(98.0 %id)
DB377686 placenta .d 1640 to 2054 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
BX338012 Placenta Cot 25-normalized .d 1930 to 2030 102 to 1       1007/1036
(97 %)
27 diff
(97.4 %id)
AK295240 caudate nucleus .e 270 to 1077 295 to 1102 V148A tiling clone,   1102/1102
(100 %)
2 diff
(99.9 %id)
DC326310 caudate nucleus .e 270 to 557 296 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BX376010 Neuroblastoma Cot 25-normalized .e 660 to 1694 1029 to 1       1029/1064
(96 %)
20 diff
(98.2 %id)
FN048622 breast carcinoma .e 662 to 761 1 to 100       100/100
(100 %)
3 diff
(97.0 %id)
W02363 melanocyte .e 676 to 969 1 to 294       294/294
(100 %)
6 diff
(98.0 %id)
BX379409 Placenta Cot 25-normalized .e 687 to 1673 988 to 1       988/988
(100 %)
25 diff
(97.5 %id)
BQ307481 breast .e 841 to 1187 10 to 353       344/358
(96 %)
6 diff
(98.4 %id)
N80298 multiple sclerosis lesions .e 846 to 1323 1 to 482   fully sequenced,   482/482
(100 %)
17 diff
(96.5 %id)
AA304486 aorta .e 863 to 1127 1 to 265       265/265
(100 %)
1 diff
(99.7 %id)
AW954799   .e 864 to 1537 1 to 672   tiling clone,   672/672
(100 %)
15 diff
(97.8 %id)
EC535868 Prostate .e 888 to 990 101 to 1       101/101
(100 %)
2 diff
(98.1 %id)
TI_154037073   .e 934 to 1707 30 to 783   tiling clone, Submitted on the opposite strand 754/855
(88 %)
22 diff
(97.5 %id)
TI_149302128   .e 960 to 1723 839 to 84   AAA   756/948
(79 %)
14 diff
(98.6 %id)
TI_154126727   .e 960 to 1722 865 to 112   AAA   754/912
(82 %)
24 diff
(97.4 %id)
TI_154129237   .e 976 to 1725 831 to 88   AAA   744/979
(75 %)
13 diff
(98.7 %id)
BU633627 cell lines, Chondrosarcoma .e 995 to 1726 747 to 19   AAA   729/729
(100 %)
7 diff
(99.1 %id)
CA425710 cell lines, Chondrosarcoma .e 1000 to 1726 741 to 19   AAA   723/726
(99 %)
9 diff
(98.8 %id)
TI_154050062   .e 1003 to 1727 811 to 92   AAA   720/953
(75 %)
7 diff
(99.3 %id)
TI_154039502   .e 1013 to 1726 798 to 95   AAA   704/922
(76 %)
12 diff
(98.7 %id)
CA413741 Chondrosarcoma Grade II, Left Pelvis .e 1042 to 1727 703 to 19   tiling clone, AAA   685/689
(99 %)
3 diff
(99.6 %id)
DB541410 hippocampus .e 1064 to 1725 1 to 659     Submitted on the opposite strand 659/659
(100 %)
9 diff
(98.7 %id)
CA417842 Chondrosarcoma Cell line .e 1080 to 1725 663 to 17   AAA   647/647
(100 %)
3 diff
(99.6 %id)
BM991284 lung, Lung Focal Fibrosis .e 1088 to 1723 650 to 19   AAA   632/634
(99 %)
3 diff
(99.6 %id)
BQ005985 Chondrosarcoma, Left Pelvis .e 1089 to 1726 655 to 19   AAA   637/637
(100 %)
3 diff
(99.6 %id)
BM980384 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1089 to 1723 652 to 19   AAA   634/634
(100 %)
3 diff
(99.6 %id)
BQ446521 Knee, Osteoarthritic Cartilage .e 1089 to 1726 655 to 19   AAA   637/637
(100 %)
3 diff
(99.6 %id)
AW805136 uterus .e 1097 to 1401 303 to 1       303/303
(100 %)
9 diff
(97.1 %id)
BU628423 cell lines, Chondrosarcoma .e 1097 to 1726 648 to 19   AAA   630/630
(100 %)
2 diff
(99.7 %id)
BG285862 bladder, transitional cell papilloma, cell line .e 1110 to 1724 1 to 626       626/640
(97 %)
11 diff
(98.3 %id)
AW373398 breast .e 1125 to 1396 272 to 1       272/272
(100 %)
2 diff
(99.3 %id)
AW875459 pnet .e 1136 to 1396 2 to 261       260/261
(99 %)
6 diff
(97.8 %id)
BQ007449 placenta .e 1185 to 1726 559 to 18   AAA   542/542
(100 %)
3 diff
(99.5 %id)
CF123140 CNCAP(3)T-225 cell line, Prostate .e 1190 to 1725 45 to 580   AAA   536/580
(92 %)
7 diff
(98.8 %id)
TI_154182958   .e 1190 to 1725 107 to 642   AAA   536/573
(93 %)
6 diff
(99.0 %id)
TI_157599357   .e 1201 to 1723 618 to 96   AAA   523/552
(94 %)
7 diff
(98.8 %id)
AA136805 uterus .e 1213 to 1509 1 to 303   fully sequenced,   303/303
(100 %)
6 diff
(98.1 %id)
AA683501 uterus .e 1214 to 1726 513 to 1       513/513
(100 %)
1 diff
(99.9 %id)
FN089112 breast carcinoma .e 1216 to 1322 1 to 105       105/105
(100 %)
6 diff
(94.3 %id)
N73299 melanocyte .e 1221 to 1726 508 to 1       508/508
(100 %)
11 diff
(97.9 %id)
AW341082 carcinoid, lung .e 1223 to 1682 1 to 460     Submitted on the opposite strand 460/460
(100 %)
8 diff
(98.3 %id)
BE645976 Prostate .e 1224 to 1726 504 to 2       503/504
(99 %)
0 diff
(100 %id)
FN116962 breast carcinoma .e 1225 to 1335 111 to 1     Submitted on the opposite strand 111/111
(100 %)
2 diff
(98.2 %id)
AI632954 carcinoid, lung .e 1228 to 1680 1 to 453     Submitted on the opposite strand 453/453
(100 %)
2 diff
(99.6 %id)
AA493369 colon .e 1238 to 1721 487 to 4       484/487
(99 %)
0 diff
(100 %id)
BF001820 colon, colon tumor, RER+ .e 1238 to 1725 505 to 18   AAA   488/488
(100 %)
3 diff
(99.4 %id)
AI478433 Kidney .e 1239 to 1723 486 to 2       485/486
(99 %)
0 diff
(100 %id)
AI037911   .e 1240 to 1687 448 to 1       448/448
(100 %)
2 diff
(99.6 %id)
AW272169 Kidney .e 1242 to 1723 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
AW043832 pooled .e 1248 to 1726 482 to 4       479/482
(99 %)
0 diff
(100 %id)
BF361367 pnet .e 1250 to 1396 126 to 272       147/272
(54 %)
6 diff
(97.8 %id)
BU618943 Cell Line, Chondrosarcoma .e 1253 to 1725 489 to 17   AAA   473/562
(84 %)
2 diff
(99.7 %id)
AW629090 pooled .e 1269 to 1725 466 to 10       457/466
(98 %)
0 diff
(100 %id)
AW970817   .e 1271 to 1725 455 to 1     Submitted on the opposite strand 455/608
(74 %)
0 diff
(100 %id)
AW183622 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1288 to 1726 439 to 1       439/439
(100 %)
1 diff
(99.8 %id)
BG149229 carcinoid, lung .e 1295 to 1721 428 to 2       427/428
(99 %)
0 diff
(100 %id)
N64510 multiple sclerosis lesions .e 1308 to 1726 427 to 2   fully sequenced,   426/427
(99 %)
0 diff
(100 %id)
BG899091 cartilage .e 1309 to 1725 92 to 508   AAA   417/434
(96 %)
0 diff
(100 %id)
FN108763 breast carcinoma .e 1310 to 1411 101 to 1     Submitted on the opposite strand 101/102
(99 %)
2 diff
(98.1 %id)
AW079953 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 1313 to 1721 414 to 6       409/414
(98 %)
0 diff
(100 %id)
AI554533 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1314 to 1721 411 to 4       408/411
(99 %)
0 diff
(100 %id)
AA563670 colon .e 1315 to 1706 392 to 1       392/392
(100 %)
3 diff
(99.3 %id)
AA010682 heart .e 1317 to 1721 1 to 406       406/411
(98 %)
3 diff
(99.3 %id)
AW237610 Kidney .e 1319 to 1719 401 to 1       401/401
(100 %)
2 diff
(99.6 %id)
BP396835 pancreatic islet .e 1324 to 1724 1 to 401     Submitted on the opposite strand 401/405
(99 %)
2 diff
(99.6 %id)
AW419057 2 pooled tumors (clear cell type), Kidney .e 1325 to 1721 400 to 4       397/400
(99 %)
0 diff
(100 %id)
AI470926 Kidney .e 1329 to 1726 401 to 4       398/401
(99 %)
0 diff
(100 %id)
AI627833 Kidney .e 1330 to 1726 397 to 1       397/397
(100 %)
3 diff
(99.3 %id)
AA195179 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1336 to 1726 1 to 392   fully sequenced, AAA   392/392
(100 %)
2 diff
(99.5 %id)
AI471443 colon, moderately-differentiated adenocarcinoma .e 1338 to 1723 384 to 1       384/384
(100 %)
2 diff
(99.5 %id)
CF529064 placenta .e 1341 to 1723 400 to 18   AAA   383/383
(100 %)
2 diff
(99.5 %id)
AW590266 pooled germ cell tumors .e 1343 to 1726 390 to 7       384/390
(98 %)
0 diff
(100 %id)
CR740007   .e 1344 to 1718 1 to 375   AAA   375/375
(100 %)
0 diff
(100 %id)
AI168477 pooled .e 1355 to 1725 388 to 18   AAA   371/371
(100 %)
2 diff
(99.5 %id)
AW771214 Kidney .e 1356 to 1726 383 to 13       371/383
(96 %)
0 diff
(100 %id)
AI767341 Kidney .e 1361 to 1726 366 to 1       366/366
(100 %)
1 diff
(99.8 %id)
AW340086 pooled .e 1363 to 1723 374 to 14       361/374
(96 %)
0 diff
(100 %id)
BE859026 Prostate .e 1374 to 1726 361 to 9       353/361
(97 %)
0 diff
(100 %id)
AI126937 heart .e 1375 to 1604 63 to 292     Submitted on the opposite strand 230/292
(78 %)
6 diff
(98.0 %id)
AI127082 heart .e 1375 to 1604 68 to 297     Submitted on the opposite strand 230/297
(77 %)
6 diff
(98.0 %id)
AI280079 brain, tumor, 5 pooled (see description) .e 1375 to 1726 360 to 9       352/360
(97 %)
0 diff
(100 %id)
BE673297 Prostate .e 1375 to 1725 354 to 4       351/354
(99 %)
0 diff
(100 %id)
AI244821 Kidney .e 1378 to 1726 357 to 9       349/357
(97 %)
0 diff
(100 %id)
AI381283   .e 1379 to 1725 347 to 1       347/347
(100 %)
1 diff
(99.8 %id)
AW300130 Kidney .e 1386 to 1725 347 to 8       340/347
(97 %)
0 diff
(100 %id)
AW183374 pooled .e 1391 to 1725 354 to 18   AAA   337/337
(100 %)
6 diff
(98.3 %id)
AW748455 breast .e 1401 to 1690 23 to 319       297/319
(93 %)
6 diff
(98.2 %id)
AW195397 Kidney .e 1401 to 1726 329 to 1       329/329
(100 %)
6 diff
(98.2 %id)
BF111830 pooled .e 1401 to 1726 334 to 8       327/334
(97 %)
0 diff
(100 %id)
BI005932 kidney_tumor .e 1411 to 1685 1 to 275       275/275
(100 %)
1 diff
(99.7 %id)
BQ030453 lung, Metastatic Chondrosarcoma .e 1426 to 1726 320 to 20   AAA   301/301
(100 %)
4 diff
(98.7 %id)
AI824598 Prostate .e 1457 to 1725 268 to 1       268/268
(100 %)
1 diff
(99.7 %id)
AW573004 pooled .e 1474 to 1724 253 to 3       251/253
(99 %)
0 diff
(100 %id)
AA136706 uterus .e 1479 to 1726 253 to 1   fully sequenced,   253/253
(100 %)
1 diff
(99.7 %id)
Z98448 ovary, thymus .e 1526 to 1721 199 to 4       196/199
(98 %)
0 diff
(100 %id)
AA195080 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1534 to 1726 193 to 1   fully sequenced,   193/193
(100 %)
0 diff
(100 %id)
AA905255 pooled .e 1540 to 1721 182 to 1       182/182
(100 %)
0 diff
(100 %id)
FN146321 breast carcinoma .e 1547 to 1616 1 to 68       68/69
(98 %)
3 diff
(95.7 %id)
FN169951 breast carcinoma .e 1556 to 1663 1 to 107       107/115
(93 %)
9 diff
(92.2 %id)
AI497883 pooled .e 1575 to 1723 174 to 26   AAA   149/151
(98 %)
3 diff
(98.1 %id)
FN134410 breast carcinoma .e 1606 to 1707 1 to 100       100/102
(98 %)
3 diff
(97.1 %id)
AW497639   .e 1632 to 1697 1 to 66     Submitted on the opposite strand 66/66
(100 %)
0 diff
(100 %id)
DB245785 uterus, tumor tissue .f 270 to 557 297 to 584 A42R G43W S44G L45P A46L ... tiling clone, capped   583/583
(100 %)
2 diff
(99.7 %id)
TI_157610447   .g 1 to 592 677 to 81 F2Y G12V W19C Q20K P38R ... tiling clone, AAA   595/981
(60 %)
15 diff
(98.5 %id)
BC128230 PCR rescued clones .h 1 to 601 1 to 601 P3T tiling clone,   601/610
(98 %)
8 diff
(98.7 %id)
BC141932 PCR rescued clones .h 1 to 601 1 to 601 P3T     601/611
(98 %)
8 diff
(98.7 %id)
AI347010 adenocarcinoma, colon .i 1 to 431 441 to 11 exact tiling clone, AAA   431/461
(93 %)
0 diff
(100 %id)
AK095224 colon .j 1 to 2343 2 to 2344 A19T W29R tiling clone, available from FLJ,   2344/2344
(100 %)
9 diff
(99.7 %id)
DA427931 colon .j 1 to 527 2 to 529 A19T W29R capped   528/528
(100 %)
6 diff
(98.9 %id)
DB313007 colon .j 1827 to 2343 518 to 1       518/518
(100 %)
3 diff
(99.5 %id)
AK094111 adrenal gland .k-u 1 to 1838 2 to 1839 exact tiling clone, available from FLJ,   1839/1839
(100 %)
6 diff
(99.7 %id)
DA013082 adrenal gland .k-u 1 to 589 2 to 590 exact capped   589/589
(100 %)
0 diff
(100 %id)
BX508211   .k-u 474 to 1234 1 to 760   tiling clone,   760/760
(100 %)
9 diff
(98.9 %id)
DB295320 adrenal gland .k-u 1298 to 1838 541 to 1       541/541
(100 %)
4 diff
(99.3 %id)
DA351897 substantia nigra .l 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
2 diff
(99.7 %id)
AI809215 pooled .m 1 to 504 509 to 5 exact tiling clone,   505/509
(99 %)
1 diff
(99.9 %id)
BF827234 head_normal .n-u 1 to 466 1 to 464 W7G F33L tiling clone,   464/464
(100 %)
28 diff
(94.0 %id)
AI038485 parathyroid gland, parathyroid tumor .o 1 to 345 1 to 345 exact tiling clone, Submitted on the opposite strand 345/345
(100 %)
1 diff
(99.8 %id)
AI873170 Prostate .p 1 to 232 232 to 1 exact tiling clone,   232/232
(100 %)
0 diff
(100 %id)
AK057983 stomach mucosa Gene SUMF1, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK093354 testis Gene SUMF1, variant not shown       available from FLJ,      
DA044938 bladder Gene SUMF1, variant not shown       capped This clone was ignored    
DA050046   Gene SUMF1, variant not shown       capped      
DB297237 cerebellum Gene SUMF1, variant not shown         Suspected internal deletion, this clone was ignored    
DA065246 cerebellum Gene SUMF1, variant not shown       capped Suspected internal deletion, this clone was ignored    
BX091432 whole brain Gene SUMF1, variant not shown         Submitted on the opposite strand    
BX096481 pooled Gene SUMF1, variant not shown              
DA481383   Gene SUMF1, variant not shown       capped This clone was ignored    
R11696 whole brain Gene SUMF1, variant not shown              
R13966 whole brain Gene SUMF1, variant not shown              
R40026 whole brain Gene SUMF1, variant not shown       AAA      
R25257 whole brain Gene SUMF1, variant not shown              
R46610 whole brain Gene SUMF1, variant not shown       AAA      
H95231 placenta Gene SUMF1, variant not shown         This clone was ignored    
AI359930 anaplastic oligodendroglioma, brain Gene SUMF1, variant not shown         Submitted on the opposite strand    
AI374871   Gene SUMF1, variant not shown              
AI589851 anaplastic oligodendroglioma, brain Gene SUMF1, variant not shown         Submitted on the opposite strand    
AI741578 pooled Gene SUMF1, variant not shown         Submitted on the opposite strand    
AI742528 pooled Gene SUMF1, variant not shown         Submitted on the opposite strand    
AI820062 pooled Gene SUMF1, variant not shown         Submitted on the opposite strand    
DB323066   Gene SUMF1, variant not shown         This clone was ignored    
DA689007   Gene SUMF1, variant not shown       capped This clone was ignored    
DA764135 tongue Gene SUMF1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB325811 brain Gene SUMF1, variant not shown              
DA772597 brain Gene SUMF1, variant not shown       capped      
DA777933 brain Gene SUMF1, variant not shown       capped This clone was ignored    
DB032628 testis Gene SUMF1, variant not shown       capped      
DB337165 testis Gene SUMF1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m, .n-u, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC