To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ZNF280CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
70 supporting clones for gene ZNF280C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_017666.4   ZNF280C.a 1 to 4695 1 to 4695 exact RefSeq,   4695/4695
(100 %)
0 diff
(100 %id)
DR003059 fetal brain ZNF280C.a 1 to 521 1 to 520   tiling clone,   520/520
(100 %)
2 diff
(99.7 %id)
BG566123 Liver ZNF280C.a 25 to 826 1 to 815       782/1089
(71 %)
32 diff
(97.1 %id)
BF979357 testis ZNF280C.a 45 to 701 1 to 654       654/914
(71 %)
18 diff
(98.1 %id)
BG718445 testis ZNF280C.a 45 to 787 1 to 745       745/745
(100 %)
11 diff
(98.6 %id)
BG719141 testis ZNF280C.a 45 to 787 1 to 742       742/742
(100 %)
18 diff
(97.6 %id)
BX952878   ZNF280C.a 49 to 459 1 to 411       411/411
(100 %)
5 diff
(98.8 %id)
AK290373 tongue, tumor tissue ZNF280C.a 50 to 2651 1 to 2602 exact tiling clone,   2602/2602
(100 %)
2 diff
(100.0 %id)
BC051728 testis ZNF280C.a 50 to 4679 1 to 4631 exact tiling clone, available from MGC, AAA   4631/4631
(100 %)
5 diff
(99.9 %id)
BP280797   ZNF280C.a 50 to 632 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA455883 tongue, tumor tissue ZNF280C.a 51 to 582 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA459468 tongue, tumor tissue ZNF280C.a 51 to 617 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA756208   ZNF280C.a 51 to 549 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA799024 brain ZNF280C.a 51 to 594 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB048071 testis ZNF280C.a 51 to 598 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB082423 testis ZNF280C.a 51 to 625 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BX474223   ZNF280C.a 52 to 702 1 to 651       651/651
(100 %)
0 diff
(100 %id)
AL834333 testis ZNF280C.a 70 to 4650 1 to 4582 exact available from DKFZ, AAA   4582/4582
(100 %)
5 diff
(99.9 %id)
AK000102 colon ZNF280C.a 78 to 2090 1 to 2013   available from FLJ, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2013/2021
(99 %)
7 diff
(99.7 %id)
BP229247 brain ZNF280C.a 133 to 714 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BX481708   ZNF280C.a 164 to 847 1 to 684       684/684
(100 %)
5 diff
(99.3 %id)
DN995004 brain, whole brain ZNF280C.a 167 to 751 9 to 593       585/593
(98 %)
6 diff
(99.0 %id)
CN424002 embryonic stem cells, cell lines H1, H7, andH9 ZNF280C.a 168 to 898 1 to 731       731/731
(100 %)
2 diff
(99.8 %id)
CN424000 embryonic stem cells, DMSO-treated H9 cellline ZNF280C.a 170 to 916 3 to 749       747/749
(99 %)
7 diff
(99.1 %id)
AI264182 Kidney ZNF280C.a 227 to 679 468 to 16       453/479
(94 %)
20 diff
(95.9 %id)
CN424001 embryonic stem cells, cell lines H1, H7, andH9 ZNF280C.a 254 to 856 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
DB071333 testis ZNF280C.a 532 to 1079 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA186888 amygdala ZNF280C.a 675 to 1235 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AW873569 pooled ZNF280C.a 825 to 1341 546 to 30       517/546
(94 %)
1 diff
(99.9 %id)
CR746835 embryonal carcinoma, cell line, testis ZNF280C.a 1320 to 1818 12 to 510       499/510
(97 %)
6 diff
(98.9 %id)
BM456831 embryonal carcinoma, cell line, testis ZNF280C.a 1323 to 1990 1 to 672       672/1413
(47 %)
5 diff
(99.7 %id)
AL600988   ZNF280C.a 1626 to 2380 1 to 758       758/758
(100 %)
6 diff
(99.3 %id)
DA441065 tongue, tumor tissue ZNF280C.a 1978 to 2535 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DR158134 human embryonic stem cells differentiated toan early endodermal cell type ZNF280C.a 2178 to 2937 1 to 760       760/760
(100 %)
0 diff
(100 %id)
DR156523 human embryonic stem cells differentiated toan early endodermal cell type ZNF280C.a 2230 to 3001 1 to 772       772/772
(100 %)
0 diff
(100 %id)
BE004385 breast_normal ZNF280C.a 2621 to 2970 357 to 8     Submitted on the opposite strand 350/385
(90 %)
0 diff
(100 %id)
BP338485 Spleen ZNF280C.a 2958 to 3533 1 to 576       576/577
(99 %)
15 diff
(97.5 %id)
AW408489 lymph ZNF280C.a 3456 to 3960 8 to 512       505/513
(98 %)
4 diff
(99.3 %id)
TI_154148133   ZNF280C.a 3456 to 4109 87 to 739       653/658
(99 %)
18 diff
(97.3 %id)
CR603297 fetal brain ZNF280C.a 3774 to 4645 1 to 872   tiling clone,   872/872
(100 %)
0 diff
(100 %id)
BX413265 brain, fetal brain ZNF280C.a 3774 to 4635 862 to 1       862/862
(100 %)
9 diff
(99.0 %id)
BX441545 brain, fetal brain ZNF280C.a 3774 to 4645 1 to 872       872/872
(100 %)
3 diff
(99.7 %id)
BF242753 bone marrow, from acute myelogenous leukemia ZNF280C.a 3841 to 4499 1 to 665       665/693
(95 %)
28 diff
(96.0 %id)
CA306758 Alveolar Macrophage, lung ZNF280C.a 4002 to 4642 659 to 19   AAA   641/641
(100 %)
1 diff
(99.9 %id)
CN424003 embryonic stem cells, DMSO-treated H9 cellline ZNF280C.a 4077 to 4559 1 to 483       483/483
(100 %)
0 diff
(100 %id)
DB313707 tongue, tumor tissue ZNF280C.a 4078 to 4604 527 to 1       527/527
(100 %)
0 diff
(100 %id)
AI681269 carcinoid, lung ZNF280C.a 4097 to 4641 545 to 1       545/545
(100 %)
0 diff
(100 %id)
DB350438.
matches multiple genes
trachea ZNF280C.a 4102 to 4648 547 to 1     also hits gene ZFP161 547/547
(100 %)
0 diff
(100 %id)
BX441544 brain, fetal brain ZNF280C.a 4112 to 4541 432 to 1       432/544
(79 %)
14 diff
(97.5 %id)
AA773325 lung, lung carcinoma ZNF280C.a 4113 to 4640 528 to 1       528/528
(100 %)
0 diff
(100 %id)
BF448336 carcinoid, lung ZNF280C.a 4113 to 4645 535 to 1       535/535
(100 %)
6 diff
(98.9 %id)
BE501625 malignant melanoma, metastatic to lymphnode, skin ZNF280C.a 4134 to 4642 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AI923562 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors ZNF280C.a 4170 to 4642 485 to 13   AAA   473/473
(100 %)
0 diff
(100 %id)
DB521595 testis ZNF280C.a 4181 to 4647 1 to 467     Submitted on the opposite strand 467/469
(99 %)
1 diff
(99.8 %id)
AW611940 Kidney ZNF280C.a 4208 to 4649 445 to 4       442/445
(99 %)
0 diff
(100 %id)
BX092851 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors ZNF280C.a 4209 to 4642 448 to 15   AAA   434/434
(100 %)
0 diff
(100 %id)
AA805654 germinal center B cell ZNF280C.a 4261 to 4686 440 to 15   AAA   426/426
(100 %)
0 diff
(100 %id)
FN131863 breast carcinoma ZNF280C.a 4279 to 4380 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
GD153349   ZNF280C.a 4306 to 4642 1 to 334   AAA   334/334
(100 %)
6 diff
(98.3 %id)
BE139550 serous papillary carcinoma, high grade, 2pooled tumors, uterus ZNF280C.a 4361 to 4693 343 to 11   AAA   333/333
(100 %)
0 diff
(100 %id)
D62741   ZNF280C.a 4394 to 4686 10 to 302       293/302
(97 %)
6 diff
(98.1 %id)
AL133204   ZNF280C.b 1 to 1970 1 to 1970 exact tiling clone,   1970/1970
(100 %)
0 diff
(100 %id)
AW810957 stomach ZNF280C.c-u 1 to 597 1 to 598 F11I K30R T50P tiling clone,   598/598
(100 %)
30 diff
(95.0 %id)
AW810972 stomach ZNF280C.c-u 4 to 543 9 to 545 L45W tiling clone,   537/545
(98 %)
6 diff
(98.9 %id)
AW810807 stomach ZNF280C.c-u 12 to 578 1 to 573 M8L H22P M24H K25E V26R ... tiling clone,   573/578
(99 %)
50 diff
(91.4 %id)
AW810922 stomach ZNF280C.c-u 21 to 596 1 to 574 L7F T18N tiling clone,   574/574
(100 %)
14 diff
(97.6 %id)
AW810809 stomach ZNF280C.c-u 103 to 605 96 to 600 L45W tiling clone,   505/600
(84 %)
6 diff
(99.0 %id)
AA757633 pineal gland ZNF280C.d-u 1 to 494 494 to 1 N16Y S21A tiling clone,   494/494
(100 %)
6 diff
(98.8 %id)
CN414211 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 ZNF280C.e 1 to 479 1 to 479 exact tiling clone,   479/479
(100 %)
0 diff
(100 %id)
CN264586 embryonic stem cells, cell lines H1, H7, andH9 ZNF280C.f-u 1 to 243 9 to 251 exact tiling clone,   243/251
(96 %)
6 diff
(97.7 %id)
AV711538 adrenal cortico adenoma for Cushing'ssyndrome Gene ZNF280C, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C