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Gene SUCLA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
352 supporting clones for gene SUCLA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC383015 Prostate .a 1 to 542 1 to 542   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
CB987951 Human Placenta, placenta .a 2 to 746 20 to 767       748/773
(96 %)
11 diff
(98.6 %id)
DC314148 amygdala .a 5 to 591 1 to 590       586/590
(99 %)
6 diff
(99.0 %id)
AB035863   .a 29 to 2191 1 to 2163 exact tiling clone, AAA   2163/2163
(100 %)
1 diff
(100.0 %id)
NM_003850.2   .a 29 to 2191 1 to 2163 exact RefSeq, AAA   2163/2163
(100 %)
0 diff
(100 %id)
DA178744 amygdala .a 36 to 571 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA308573 hippocampus .a 36 to 572 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB457005 testis .a 41 to 534 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
DB486948 hypothalamus .a 41 to 484 1 to 444       444/444
(100 %)
0 diff
(100 %id)
AK001847 placenta .a 42 to 2191 1 to 2150 N40D S199T I203V available from FLJ,   2150/2150
(100 %)
5 diff
(99.8 %id)
AK225452 small intestine .a 42 to 1794 1 to 1753 N18S Q65R V95A S199T     1753/1753
(100 %)
6 diff
(99.7 %id)
DC375677 brain .a 42 to 620 1 to 583       580/584
(99 %)
10 diff
(98.3 %id)
BP360975 thalamus .a 42 to 627 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DA060692 cerebellum .a 43 to 605 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA063211 cerebellum .a 43 to 611 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA071638 cerebellum .a 43 to 624 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA077401 cerebellum .a 43 to 610 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA130054 alzheimer cortex .a 43 to 671 2 to 630   capped   629/629
(100 %)
0 diff
(100 %id)
DA154549 amygdala .a 43 to 616 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA156926 amygdala .a 43 to 571 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA161523 amygdala .a 43 to 571 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA176638 amygdala .a 43 to 533 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA256455 caudate nucleus .a 43 to 604 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA263825 caudate nucleus .a 43 to 571 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA277422 corpus callosum .a 43 to 619 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA286506 corpus callosum .a 43 to 620 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA288139 corpus callosum .a 43 to 615 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA355764 subthalamic nucleus .a 43 to 604 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA368353 subthalamic nucleus .a 43 to 620 2 to 579   capped   578/589
(98 %)
1 diff
(99.9 %id)
DA484269 brain .a 43 to 575 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA562333 heart .a 43 to 620 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA622733 Kidney .a 43 to 584 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA627204 Kidney .a 43 to 597 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA631887 Kidney .a 43 to 607 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA661539   .a 43 to 620 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA666357   .a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB026122 testis .a 43 to 614 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB114984 thymus .a 43 to 600 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA011431 adrenal gland .a 45 to 590 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA182457 amygdala .a 45 to 633 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA752631   .a 45 to 613 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA825715 pericardium .a 47 to 606 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB495521 hypothalamus .a 49 to 553 1 to 505       505/505
(100 %)
0 diff
(100 %id)
DA644866   .a 49 to 641 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
AL598961   .a 50 to 549 1 to 500       500/500
(100 %)
0 diff
(100 %id)
DA271601 caudate nucleus .a 51 to 590 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA647544   .a 51 to 835 2 to 786   capped   785/785
(100 %)
8 diff
(99.0 %id)
AF087890   .a 56 to 1899 38 to 1881 T15P L16F R17G N18T H19T ...     1844/1881
(98 %)
13 diff
(99.4 %id)
BX640602 human endometrium carcinoma cell line .a 58 to 2191 1 to 2134 N231Y available from DKFZ, AAA   2134/2134
(100 %)
4 diff
(99.9 %id)
DB449045 testis .a 59 to 493 1 to 435       435/435
(100 %)
0 diff
(100 %id)
DB472527 hippocampus .a 62 to 550 1 to 489       489/489
(100 %)
1 diff
(99.8 %id)
DA016559 adrenal gland .a 63 to 610 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA273791 corpus callosum .a 63 to 628 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA485718 brain .a 63 to 643 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB472895 hippocampus .a 63 to 522 1 to 460       460/460
(100 %)
2 diff
(99.6 %id)
DB479305 hippocampus .a 63 to 520 1 to 458       458/458
(100 %)
2 diff
(99.6 %id)
DA885754   .a 63 to 610 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA935477 Spleen .a 63 to 659 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
CR625494 neuroblastoma .a 65 to 2177 1 to 2113 exact tiling clone,   2113/2113
(100 %)
0 diff
(100 %id)
TI_57243245   .a 65 to 805 64 to 808       745/808
(92 %)
10 diff
(98.8 %id)
DA198674 brain .a 66 to 639 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB179677 kidney, tumor tissue .a 66 to 614 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AK315513 tongue .a 67 to 1477 1 to 1411 S199T     1411/1411
(100 %)
1 diff
(100.0 %id)
DC306252 cerebellum .a 67 to 620 1 to 555       555/559
(99 %)
2 diff
(99.7 %id)
AU280000   .a 67 to 633 1 to 567       567/567
(100 %)
0 diff
(100 %id)
AL711058 human skeletal muscle .a 67 to 627 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA996417   .a 67 to 594 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA058862 cerebellum .a 68 to 610 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA071404 cerebellum .a 68 to 644 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA072272 cerebellum .a 68 to 641 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA086320 cerebellum .a 68 to 627 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA274047 corpus callosum .a 68 to 633 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA280952 corpus callosum .a 68 to 627 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA424719   .a 68 to 620 2 to 554   capped   553/564
(98 %)
1 diff
(99.9 %id)
DA567321 heart .a 68 to 620 2 to 554   capped   553/562
(98 %)
1 diff
(99.9 %id)
DA678529   .a 68 to 615 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA699106   .a 68 to 575 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DA705581   .a 68 to 575 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DA712359   .a 68 to 622 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA765533 tongue .a 68 to 644 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA837751 placenta .a 68 to 617 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA880488 Prostate .a 68 to 636 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA919575 small intestine .a 68 to 647 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA948724 Spleen .a 68 to 621 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CF552312 Pooled muscle (cardiac and skeletal) .a 69 to 894 1 to 828       828/899
(92 %)
8 diff
(99.2 %id)
DA820399 pericardium .a 69 to 575 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DB180074 kidney, tumor tissue .a 69 to 608 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB252751 uterus .a 69 to 646 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BX439412 placenta .a 73 to 1045 1 to 968       968/971
(99 %)
10 diff
(99.0 %id)
DA175101 amygdala .a 74 to 624 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA274124 corpus callosum .a 74 to 622 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA277552 corpus callosum .a 74 to 642 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA306812 hippocampus .a 74 to 655 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA580658   .a 74 to 625 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA010353 adrenal gland .a 77 to 640 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA041030 bladder .a 78 to 627 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA059395 cerebellum .a 78 to 620 2 to 544   capped   543/553
(98 %)
1 diff
(99.9 %id)
DA159741 amygdala .a 78 to 633 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA164332 amygdala .a 78 to 575 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA171648 amygdala .a 78 to 644 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA283118 corpus callosum .a 78 to 650 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA286515 corpus callosum .a 78 to 627 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA288432 corpus callosum .a 78 to 637 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA346148 substantia nigra .a 78 to 665 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA364594 subthalamic nucleus .a 78 to 626 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA423231   .a 78 to 597 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA548467   .a 78 to 575 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA594930 lung .a 78 to 655 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA627521 Kidney .a 78 to 611 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA702011   .a 78 to 627 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA704709   .a 78 to 575 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DB020316 testis .a 78 to 575 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DB274824 uterus .a 78 to 620 2 to 544   capped   543/553
(98 %)
1 diff
(99.9 %id)
DA057622 cerebellum .a 79 to 644 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_57238758   .a 79 to 861 90 to 879       790/879
(89 %)
15 diff
(98.3 %id)
BQ226852 melanotic melanoma, skin .a 80 to 976 1 to 897       897/900
(99 %)
4 diff
(99.6 %id)
DA056667 cerebellum .a 81 to 687 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
DN949320.
matches multiple genes
Islets of Langerhans, Pancreas .a 81 to 580 1 to 500   fully sequenced, also hits gene SEMA7A 500/500
(100 %)
0 diff
(100 %id)
AL599012   .a 82 to 626 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DB499039 hypothalamus .a 82 to 591 1 to 510       510/510
(100 %)
0 diff
(100 %id)
BP262402 small intestine .a 82 to 664 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_45208970   .a 82 to 686 94 to 698       605/698
(86 %)
9 diff
(98.8 %id)
TI_45210732   .a 82 to 801 154 to 872       719/872
(82 %)
13 diff
(98.6 %id)
TI_45213695   .a 82 to 789 91 to 807       717/988
(72 %)
22 diff
(97.8 %id)
TI_45213778   .a 82 to 723 86 to 728       643/728
(88 %)
7 diff
(99.1 %id)
TI_45214867   .a 82 to 887 95 to 905       812/990
(82 %)
33 diff
(96.7 %id)
TI_44342919   .a 82 to 857 92 to 859       768/862
(89 %)
28 diff
(96.8 %id)
DA842848 placenta .a 82 to 665 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA057704 cerebellum .a 83 to 658 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA057728 cerebellum .a 83 to 671 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA078377 cerebellum .a 83 to 664 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA091295 cerebellum .a 83 to 639 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA123685 cerebellum .a 83 to 620 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA154146 amygdala .a 83 to 639 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA161252 amygdala .a 83 to 650 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA181137 amygdala .a 83 to 649 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA181551 amygdala .a 83 to 577 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA204942 brain .a 83 to 676 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA209435 brain .a 83 to 650 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA262177 caudate nucleus .a 83 to 641 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA268758 caudate nucleus .a 83 to 643 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA276193 corpus callosum .a 83 to 661 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA277665 corpus callosum .a 83 to 647 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA397140 thalamus .a 83 to 663 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA469582   .a 83 to 635 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA552251   .a 83 to 601 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA559738 heart .a 83 to 642 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA566045 heart .a 83 to 670 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA567344 heart .a 83 to 649 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA623128 Kidney .a 83 to 636 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA636858 Kidney .a 83 to 678 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA691284   .a 83 to 657 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA700451   .a 83 to 604 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA701159   .a 83 to 604 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA715958   .a 83 to 651 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA761885 tongue .a 83 to 611 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA767496 tongue .a 83 to 675 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA771525 brain .a 83 to 663 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA878683 Prostate .a 83 to 646 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA879261 Prostate .a 83 to 663 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA900585 skeletal muscle .a 83 to 575 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
DA923899 small intestine .a 83 to 653 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA937709 Spleen .a 83 to 677 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB014714 esophageal, tumor tissue .a 83 to 652 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB022835 testis .a 83 to 635 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB176049 kidney, tumor tissue .a 83 to 656 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB206321 trachea .a 83 to 669 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA151022 amygdala .a 84 to 654 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
TI_1948130783   .a 86 to 1052 131 to 1103       973/1255
(77 %)
24 diff
(98.1 %id)
TI_1948131109   .a 86 to 517 125 to 556       432/1082
(39 %)
15 diff
(98.7 %id)
TI_1948131110   .a 86 to 1144 129 to 1189       1061/1251
(84 %)
41 diff
(96.8 %id)
TI_1948131442   .a 86 to 744 130 to 791       662/1153
(57 %)
33 diff
(97.2 %id)
TI_1948131443   .a 86 to 1049 127 to 1090       964/1239
(77 %)
23 diff
(98.2 %id)
TI_1948131766   .a 86 to 620 123 to 658       536/1177
(45 %)
16 diff
(98.7 %id)
TI_1948131767   .a 86 to 887 126 to 929       804/1303
(61 %)
14 diff
(99.0 %id)
DB125397 thymus .a 87 to 659 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BU950419 Pancreas, Purified pancreatic islet .a 88 to 748 13 to 673       661/679
(97 %)
9 diff
(98.7 %id)
TI_159678028   .a 91 to 991 42 to 929       888/1046
(84 %)
27 diff
(97.5 %id)
F08123 brain, total brain .a 96 to 417 1 to 320       320/320
(100 %)
2 diff
(99.4 %id)
DA769585 brain .a 99 to 674 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA075148 cerebellum .a 101 to 671 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB042394 testis .a 106 to 647 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB462608 testis .a 135 to 620 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
AF058953 Liver .a 197 to 2191 1 to 1995   AAA   1995/1995
(100 %)
1 diff
(100.0 %id)
BU178753 leiomyosarcoma, uterus .a 775 to 1618 1 to 855       855/902
(94 %)
21 diff
(97.7 %id)
BG743711 skin .a 810 to 1580 1 to 770       770/770
(100 %)
4 diff
(99.5 %id)
AL080096 brain .a 840 to 2191 1 to 1352   available from DKFZ, AAA   1352/1352
(100 %)
0 diff
(100 %id)
CA950107 Pancreas, Purified pancreatic islet .a 867 to 1370 1 to 503       503/503
(100 %)
1 diff
(99.9 %id)
BM702681 eye, Retina Foveal and Macular .a 868 to 1535 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
BX093580 uterus .a 945 to 1525 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BI762348 pooled colon, kidney, stomach .a 979 to 1768 1 to 790       790/790
(100 %)
3 diff
(99.7 %id)
TI_57151182   .a 979 to 1768 33 to 822       790/822
(96 %)
9 diff
(99.0 %id)
BM722575 eye, fetal eye .a 1130 to 1681 1 to 552   fully sequenced,   552/552
(100 %)
0 diff
(100 %id)
TI_149299010   .a 1193 to 1982 869 to 84   AAA   786/950
(82 %)
5 diff
(99.5 %id)
BU684890 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1226 to 1982 772 to 17   AAA   756/756
(100 %)
2 diff
(99.8 %id)
TI_57147094   .a 1232 to 1997 39 to 813       773/813
(95 %)
26 diff
(96.9 %id)
AL565771 brain, fetal brain .a 1263 to 2136 903 to 29       852/881
(96 %)
12 diff
(98.7 %id)
AW812912 stomach .a 1288 to 1981 694 to 4       691/694
(99 %)
2 diff
(99.8 %id)
AW582017 stomach .a 1308 to 1937 623 to 1       623/642
(97 %)
23 diff
(96.5 %id)
BQ325251 colon_ins .a 1308 to 1524 220 to 3       218/257
(84 %)
3 diff
(98.9 %id)
AW390458 stomach .a 1336 to 1783 448 to 1       448/448
(100 %)
12 diff
(97.4 %id)
TI_149300262   .a 1362 to 2189 885 to 61   AAA   825/970
(85 %)
19 diff
(98.1 %id)
BG195995   .a 1401 to 2127 733 to 10     Submitted on the opposite strand 724/954
(75 %)
0 diff
(100 %id)
TI_43961120   .a 1412 to 2128 742 to 18       725/859
(84 %)
0 diff
(100 %id)
BU740366 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1418 to 2191 793 to 19   AAA   775/775
(100 %)
4 diff
(99.5 %id)
BM679226 eye, fetal eye .a 1651 to 2191 559 to 19   fully sequenced, AAA   541/541
(100 %)
4 diff
(99.3 %id)
BU950137 Pancreas, Purified pancreatic islet .a 1721 to 2190 470 to 1       470/470
(100 %)
0 diff
(100 %id)
CA943893 Pancreas, Purified pancreatic islet .a 1724 to 2189 466 to 1       466/471
(98 %)
0 diff
(100 %id)
DN949531.
matches multiple genes
Islets of Langerhans, Pancreas .a 1842 to 1976 161 to 27   fully sequenced, AAA also hits gene SEMA7A 135/135
(100 %)
0 diff
(100 %id)
Z41196 brain, total brain .a 1894 to 2191 298 to 1       298/298
(100 %)
0 diff
(100 %id)
DC346083 tongue, tumor tissue .b -10 to 573 1 to 584   tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
DC371517   .b 1 to 588 2 to 590       590/590
(100 %)
1 diff
(99.9 %id)
DC353109 brain .b 17 to 589 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DB491175 hypothalamus .b 36 to 420 1 to 384       384/384
(100 %)
6 diff
(98.5 %id)
DB496575 hypothalamus .b 36 to 528 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DC319491 brain .b 72 to 659 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
AA017533 eye, retina .b 322 to 785 1 to 468   tiling clone, Submitted on the opposite strand 468/470
(99 %)
10 diff
(97.9 %id)
AA021538 eye, retina .b 322 to 639 1 to 326     Submitted on the opposite strand 326/396
(82 %)
10 diff
(97.5 %id)
AA243602 germinal center B cell .b 322 to 638 1 to 317     Submitted on the opposite strand 317/317
(100 %)
9 diff
(97.2 %id)
AA282208 germinal center B cell .b 322 to 657 1 to 336     Submitted on the opposite strand 336/336
(100 %)
2 diff
(99.5 %id)
H87276 eye, retina .b 341 to 647 1 to 308     Submitted on the opposite strand 308/312
(98 %)
5 diff
(98.4 %id)
H85861 eye, retina .b 348 to 669 1 to 324     Submitted on the opposite strand 324/324
(100 %)
3 diff
(99.1 %id)
H85836 eye, retina .b 387 to 676 1 to 290   tiling clone, Submitted on the opposite strand 290/290
(100 %)
0 diff
(100 %id)
DC425869 brain .b 1863 to 2377 515 to 1   tiling clone,   515/515
(100 %)
2 diff
(99.7 %id)
DC328772 corpus callosum .c 1 to 578 1 to 579   tiling clone,   579/579
(100 %)
4 diff
(99.4 %id)
DC362069 Kidney .c 56 to 628 1 to 574       574/574
(100 %)
3 diff
(99.5 %id)
AK299437 tongue .c 103 to 1573 1 to 1471 H129R S141T tiling clone,   1471/1471
(100 %)
3 diff
(99.8 %id)
DC373586 tongue .c 103 to 684 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP430952   .d -9 to 279 8 to 297       290/297
(97 %)
0 diff
(100 %id)
DC313689 amygdala .d -8 to 363 1 to 372       372/375
(99 %)
2 diff
(99.5 %id)
DW415737 Liver .d -8 to 295 8 to 312       305/312
(97 %)
6 diff
(98.1 %id)
DC376518 brain .d 1 to 553 2 to 554   tiling clone,   554/554
(100 %)
0 diff
(100 %id)
BM723719 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1 to 279 1 to 279       279/279
(100 %)
0 diff
(100 %id)
AW242661 Kidney .d 35 to 278 244 to 1       244/244
(100 %)
4 diff
(98.4 %id)
AW195511 Kidney .d 36 to 287 252 to 1       252/252
(100 %)
0 diff
(100 %id)
AA515210 colon .d 37 to 257 213 to 1       213/213
(100 %)
7 diff
(96.8 %id)
AI863703 colon, colon tumor, RER+ .d 41 to 287 247 to 1       247/247
(100 %)
1 diff
(99.6 %id)
AI431768 Kidney .d 54 to 269 216 to 1       216/216
(100 %)
0 diff
(100 %id)
AK316271 brain .d 362 to 1778 385 to 1801 S141T tiling clone,   1801/1801
(100 %)
1 diff
(100.0 %id)
DC375881 brain .d 362 to 567 385 to 590       590/590
(100 %)
0 diff
(100 %id)
BP196521 adrenal gland .d 649 to 1229 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CX869818 embryonic stem .d 680 to 1434 1 to 755       755/755
(100 %)
0 diff
(100 %id)
TI_57145829   .d 720 to 1284 39 to 612       573/874
(65 %)
40 diff
(95.5 %id)
DW423975 Liver .d 744 to 1000 17 to 273   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 257/290
(88 %)
11 diff
(96.3 %id)
DA894947 skeletal muscle .d 819 to 1360 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BM720442 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 843 to 1008 1 to 166       166/166
(100 %)
1 diff
(99.4 %id)
TI_1948130784   .d 877 to 1740 990 to 121       870/1247
(69 %)
16 diff
(98.8 %id)
TI_1948131111   .d 877 to 1740 998 to 123       876/1267
(69 %)
19 diff
(98.6 %id)
TI_1948131444   .d 881 to 1740 985 to 124       862/1258
(68 %)
10 diff
(99.3 %id)
TI_1948130785   .d 885 to 1740 985 to 129       857/1197
(71 %)
14 diff
(98.9 %id)
TI_1948131112   .d 891 to 1740 971 to 129       843/1178
(71 %)
26 diff
(97.8 %id)
BQ338022 nervous_normal .d 902 to 1240 338 to 1       338/344
(98 %)
7 diff
(98.0 %id)
BQ338535 nervous_normal .d 909 to 1187 316 to 41       276/316
(87 %)
4 diff
(98.8 %id)
TI_1948131445   .d 925 to 1740 931 to 123       809/1158
(69 %)
8 diff
(99.4 %id)
DR157164 human embryonic stem cells differentiated toan early endodermal cell type .d 936 to 1729 1 to 794   tiling clone,   794/794
(100 %)
0 diff
(100 %id)
BQ716382 sympathetic trunk .d 950 to 1668 1 to 721       721/908
(79 %)
5 diff
(99.5 %id)
CU450350 epidermis .d 951 to 1647 702 to 5     Submitted on the opposite strand 698/702
(99 %)
3 diff
(99.6 %id)
BP251322 hippocampus .d 951 to 1543 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BQ315880 colon .d 954 to 1313 363 to 5       359/364
(98 %)
3 diff
(99.2 %id)
TI_1948131769   .d 977 to 1738 889 to 129       761/1165
(65 %)
6 diff
(99.5 %id)
BQ350319 head_neck .d 979 to 1654 705 to 35       671/707
(94 %)
5 diff
(99.3 %id)
AA261777 germinal center B cell .d 1061 to 1450 393 to 4     Submitted on the opposite strand 390/428
(91 %)
6 diff
(98.6 %id)
AA282159 germinal center B cell .d 1151 to 1450 302 to 4     Submitted on the opposite strand 299/317
(94 %)
1 diff
(99.7 %id)
AA122089 Pancreas .d 1339 to 1718 1 to 381       381/385
(98 %)
35 diff
(91.0 %id)
BQ310660 breast_normal .d 1381 to 1751 375 to 9       367/375
(97 %)
2 diff
(99.5 %id)
EC553263 Prostate .d 1455 to 1544 11 to 99       89/99
(89 %)
6 diff
(94.0 %id)
FN131413 breast carcinoma .d 1554 to 1613 60 to 1     Submitted on the opposite strand 60/65
(92 %)
0 diff
(100 %id)
BG181446   .d 1702 to 2442 752 to 15     Submitted on the opposite strand 738/876
(84 %)
0 diff
(100 %id)
FN051515 breast carcinoma .d 1773 to 1874 105 to 1   tiling clone, Submitted on the opposite strand 105/106
(99 %)
3 diff
(97.2 %id)
TI_149304295   .d 1800 to 2400 685 to 85   tiling clone, AAA   601/974
(61 %)
0 diff
(100 %id)
BM931976 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1809 to 2455 665 to 18   AAA Submitted on the opposite strand 648/648
(100 %)
8 diff
(98.8 %id)
BM685016 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1813 to 2455 1 to 643   AAA Submitted on the opposite strand 643/643
(100 %)
6 diff
(99.1 %id)
CK903184 Pancreas, Purified pancreatic islet .d 1832 to 2456 631 to 7     Submitted on the opposite strand 625/631
(99 %)
0 diff
(100 %id)
TI_153988445   .d 1843 to 2455 707 to 95   AAA   613/616
(99 %)
6 diff
(99.1 %id)
DB570142 hypothalamus .d 1952 to 2455 1 to 504     Submitted on the opposite strand 504/504
(100 %)
3 diff
(99.5 %id)
DB547992 hippocampus .d 1980 to 2455 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
DB528034 testis .d 1981 to 2455 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
BU739897 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1985 to 2455 489 to 19   AAA   471/471
(100 %)
0 diff
(100 %id)
DB522443 testis .d 1986 to 2449 1 to 464     Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
DB567598 hypothalamus .d 1988 to 2461 1 to 474   tiling clone, Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
DB541289 hippocampus .d 1990 to 2455 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
DB541639 hippocampus .d 1991 to 2455 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
DB556263 hypothalamus .d 2007 to 2455 1 to 452     Submitted on the opposite strand 452/452
(100 %)
4 diff
(99.2 %id)
DB566581 hypothalamus .d 2008 to 2455 1 to 448     Submitted on the opposite strand 448/448
(100 %)
1 diff
(99.8 %id)
BU733764 eye, Retina Foveal and Macular .d 2024 to 2455 450 to 19   AAA   432/432
(100 %)
1 diff
(99.8 %id)
DB516206 testis .d 2025 to 2455 1 to 431     Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
AI424015 brain, glioblastoma (pooled) .d 2027 to 2449 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AI017705 Kidney .d 2033 to 2448 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AA889021 parathyroid gland, parathyroid tumor .d 2042 to 2455 424 to 11   AAA   414/414
(100 %)
0 diff
(100 %id)
DB561598 hypothalamus .d 2050 to 2461 1 to 412     Submitted on the opposite strand 412/412
(100 %)
0 diff
(100 %id)
H85935 eye, retina .d 2053 to 2426 386 to 2     Submitted on the opposite strand 385/406
(94 %)
0 diff
(100 %id)
AA229035   .d 2065 to 2405 346 to 6       341/346
(98 %)
0 diff
(100 %id)
H85902 eye, retina .d 2093 to 2426 334 to 1     Submitted on the opposite strand 334/334
(100 %)
0 diff
(100 %id)
AA057088 eye, retina .d 2100 to 2377 281 to 1     Submitted on the opposite strand 281/291
(96 %)
6 diff
(98.0 %id)
DN912668   .d 2116 to 2449 334 to 1       334/334
(100 %)
5 diff
(98.6 %id)
BU729608 eye, Retina Foveal and Macular .d 2117 to 2455 357 to 19   AAA   339/339
(100 %)
0 diff
(100 %id)
AA017627 eye, retina .d 2203 to 2426 224 to 1     Submitted on the opposite strand 224/224
(100 %)
0 diff
(100 %id)
AA021537 eye, retina .d 2234 to 2426 193 to 1     Submitted on the opposite strand 193/194
(99 %)
0 diff
(100 %id)
FN125170 breast carcinoma .d 2300 to 2365 66 to 1     Submitted on the opposite strand 66/67
(98 %)
2 diff
(97.1 %id)
FN115480 breast carcinoma .d 2304 to 2396 1 to 98       98/99
(98 %)
6 diff
(94.0 %id)
DC366356   .e 240 to 657 157 to 574   tiling clone, Suspected internal deletion 574/574
(100 %)
0 diff
(100 %id)
DC366666   .e 240 to 642 157 to 560     Suspected internal deletion 560/560
(100 %)
1 diff
(99.9 %id)
BM967013 Islets of Langerhans, Pancreas .e 566 to 1152 1 to 587   tiling clone,   587/587
(100 %)
1 diff
(99.9 %id)
BM893738 Islets of Langerhans, Pancreas .e 1240 to 1795 559 to 4   tiling clone,   556/559
(99 %)
0 diff
(100 %id)
DB209434 trachea .f 1 to 454 6 to 459   tiling clone, capped   458/458
(100 %)
2 diff
(99.6 %id)
AK302311 testis .f 21 to 1910 1 to 1890 S65T tiling clone,   1890/1890
(100 %)
3 diff
(99.9 %id)
DC399336 testis .f 21 to 581 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
AL533435 adult brain, brain .f 34 to 944 1 to 913       913/913
(100 %)
7 diff
(99.3 %id)
DC385721 skeletal muscle .f 36 to 586 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC398531 testis .g 1 to 551 3 to 554   tiling clone,   554/554
(100 %)
3 diff
(99.5 %id)
TI_44344438   .g 23 to 817 131 to 931       801/1046
(76 %)
25 diff
(97.7 %id)
BI667748 brain, hypothalamus .g 27 to 817 1 to 797   tiling clone,   797/912
(87 %)
23 diff
(97.5 %id)
BI463025 testis .h 1 to 721 8 to 727 exact     727/727
(100 %)
8 diff
(98.9 %id)
CR596143 T cells (Jurkat cell line) Cot10-normalized .h 1 to 1409 6 to 1414 exact tiling clone,   1414/1414
(100 %)
0 diff
(100 %id)
AL558175 T cells from T cell leukemia .h 1 to 829 6 to 821 N39X fully sequenced,   821/821
(100 %)
3 diff
(99.7 %id)
AW978389   .h 728 to 1278 553 to 1     Submitted on the opposite strand 553/554
(99 %)
15 diff
(97.3 %id)
AL580066 T cells from T cell leukemia .h 799 to 1409 602 to 1   fully sequenced,   602/602
(100 %)
8 diff
(98.7 %id)
AI948746 Kidney .h 1035 to 1438 405 to 2       404/405
(99 %)
0 diff
(100 %id)
AA825731 germinal center B cell .h 1110 to 1442 361 to 29   AAA   333/333
(100 %)
2 diff
(99.4 %id)
AA828470 germinal center B cell .h 1227 to 1442 244 to 29   tiling clone, AAA   216/216
(100 %)
2 diff
(99.1 %id)
CR598689 adult brain .i 1 to 1457 5 to 1461   tiling clone,   1461/1461
(100 %)
0 diff
(100 %id)
BX433479 adult brain, brain .i 637 to 1455 818 to 1       818/830
(98 %)
22 diff
(97.4 %id)
BX410328 adult brain, brain .i 720 to 1458 1 to 739       739/739
(100 %)
2 diff
(99.8 %id)
AL565121 adult brain, brain .i 1244 to 1643 400 to 1   tiling clone,   400/400
(100 %)
1 diff
(99.8 %id)
DC313726 amygdala .j 1 to 584 1 to 584 F34L tiling clone,   584/585
(99 %)
3 diff
(99.5 %id)
DC314439 amygdala .j 1 to 580 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BF185198 bone marrow, from chronic myelogenous leukemia .k 1 to 465 3 to 463 P82L N83I I84L V85W E86N ... tiling clone,   461/836
(55 %)
16 diff
(98.1 %id)
CB161146 Liver .l 1 to 593 9 to 601 exact tiling clone,   601/601
(100 %)
0 diff
(100 %id)
AI369369 anaplastic oligodendroglioma, brain .l 280 to 536 1 to 257     Submitted on the opposite strand 257/258
(99 %)
1 diff
(99.7 %id)
AK093506 testis .m 1 to 1910 2 to 1911 exact tiling clone, available from FLJ,   1911/1911
(100 %)
3 diff
(99.9 %id)
DB040373 testis .m 1 to 550 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
BG571667 placenta .m 1062 to 1772 1 to 712 F131I Q132S L133V P134D I135N tiling clone,   712/715
(99 %)
4 diff
(99.5 %id)
DB337782 testis .m 1567 to 1910 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
DC331525 hippocampus .n 1 to 575 1 to 575 exact tiling clone,   575/575
(100 %)
0 diff
(100 %id)
AA159375 Pancreas .o 1 to 347 1 to 347   tiling clone, fully sequenced,   347/347
(100 %)
18 diff
(94.9 %id)
BQ045000 Knee, Osteoarthritic Cartilage .o 112 to 709 613 to 17   tiling clone, AAA   597/599
(99 %)
3 diff
(99.5 %id)
BX113471 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .o 272 to 706 1 to 435       435/439
(99 %)
2 diff
(99.6 %id)
AI700160 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .o 291 to 609 1 to 319     Submitted on the opposite strand 319/319
(100 %)
1 diff
(99.7 %id)
AI301811 carcinoid, lung .o 306 to 576 1 to 271   tiling clone, Submitted on the opposite strand 271/282
(96 %)
3 diff
(99.0 %id)
AA159263 Pancreas .o 315 to 708 397 to 2   fully sequenced,   396/397
(99 %)
1 diff
(99.8 %id)
DB180632 kidney, tumor tissue .p 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
CX787327 human embryonic stem cells .q 1 to 738 1 to 738 exact tiling clone,   738/738
(100 %)
0 diff
(100 %id)
AI241368 Kidney .r 1 to 290 1 to 290   tiling clone, Submitted on the opposite strand 290/290
(100 %)
1 diff
(99.7 %id)
W56484 parathyroid gland, parathyroid tumor .r 6 to 315 321 to 12   tiling clone, AAA Submitted on the opposite strand 310/310
(100 %)
5 diff
(98.4 %id)
AA627379 colon, colon tumor RER+ .s 1 to 467 1 to 464 A5L P6L R7G P8L L9S ... tiling clone, Submitted on the opposite strand 464/464
(100 %)
14 diff
(97.0 %id)
BX646990 Liver .t-u 1 to 532 1 to 531   tiling clone,   531/531
(100 %)
4 diff
(99.3 %id)
AV696795.
matches multiple genes
hepatocellular carcinoma .t-u 449 to 810 18 to 372 exact tiling clone, also hits gene cheyspey 355/379
(93 %)
4 diff
(99.0 %id)
DA852601 placenta .u-u 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BF897253 marrow .va 1 to 271 273 to 2 Q41P F42V K43* tiling clone, Submitted on the opposite strand 272/273
(99 %)
0 diff
(100 %id)
AI341094 pooled germ cell tumors .va 70 to 535 468 to 3 exact tiling clone,   466/468
(99 %)
1 diff
(99.8 %id)
CR742374   .vb 1 to 478 1 to 478 exact tiling clone,   478/478
(100 %)
1 diff
(99.8 %id)
BG207394   .vc 1 to 414 426 to 13 exact   Submitted on the opposite strand 414/426
(97 %)
0 diff
(100 %id)
BG220465   .vc 1 to 414 1 to 414 exact tiling clone,   414/416
(99 %)
3 diff
(99.3 %id)
AI285951 pooled .vd 1 to 372 375 to 5 K13N K16N P17H T18F L19S ... tiling clone,   371/375
(98 %)
8 diff
(97.9 %id)
BE875888 large cell carcinoma, undifferentiated, lung .ve-u 1 to 354 1 to 354 exact tiling clone,   354/358
(98 %)
2 diff
(99.5 %id)
AA778950   .vf-u 1 to 332 1 to 329 L22W G23V A24P L25C Q26K ... tiling clone,   329/329
(100 %)
8 diff
(97.6 %id)
DC328597 corpus callosum Gene SUCLA2, variant not shown         Suspected internal deletion, this clone was ignored    
BP429784   Gene SUCLA2, variant not shown              
AK316041 corpus callosum Gene SUCLA2, variant not shown         Suspected internal deletion, this clone was ignored    
AK001458   Gene SUCLA2, variant not shown       available from FLJ, AAA Suspected internal deletion, this clone was ignored    
AW449784   Gene SUCLA2, variant not shown              
TI_1948131768   Gene SUCLA2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u-u, .va, .vb, .vc, .vd, .ve-u, .vf-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI