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Gene STIM2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
242 supporting clones for gene STIM2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001169118.1   STIM2.a 1 to 5178 1 to 5178 exact RefSeq,   5178/5178
(100 %)
1 diff
(100.0 %id)
DB456881 testis STIM2.a 14 to 502 1 to 487       487/491
(99 %)
12 diff
(97.6 %id)
DB456915 testis STIM2.a 14 to 396 1 to 383   tiling clone,   383/390
(98 %)
4 diff
(99.0 %id)
BX343313   STIM2.a 52 to 808 1 to 754       754/754
(100 %)
7 diff
(99.1 %id)
DB452484 testis STIM2.a 128 to 596 1 to 471   tiling clone,   471/472
(99 %)
2 diff
(99.6 %id)
CA392621 eye, RPE/choroid STIM2.a 141 to 740 1 to 599       599/599
(100 %)
4 diff
(99.4 %id)
AK096846   STIM2.a 151 to 2745 1 to 2596   tiling clone, available from FLJ,   2596/2596
(100 %)
2 diff
(100.0 %id)
DA883406   STIM2.a 152 to 646 2 to 497   capped   496/496
(100 %)
2 diff
(99.6 %id)
BC136449 Testicle, PCR rescued clones STIM2.a 202 to 3651 1 to 3451 H59Y P68R tiling clone,   3451/3451
(100 %)
4 diff
(99.9 %id)
BC171766 Brain, cerebellum, PCR rescued clones STIM2.a 202 to 3651 1 to 3451 H59Y P68R     3451/3451
(100 %)
5 diff
(99.9 %id)
TI_1971559485   STIM2.a 202 to 1038 67 to 904     Submitted on the opposite strand 838/926
(90 %)
11 diff
(98.9 %id)
TI_2194645360   STIM2.a 202 to 1254 48 to 1102       1053/1301
(80 %)
38 diff
(97.1 %id)
TI_2194646298   STIM2.a 202 to 1147 57 to 1004       948/1009
(93 %)
21 diff
(98.0 %id)
BM673951 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 235 to 448 1 to 214     Submitted on the opposite strand 214/214
(100 %)
3 diff
(98.6 %id)
AI040372 liver and spleen STIM2.a 253 to 585 1 to 333     Submitted on the opposite strand 333/333
(100 %)
2 diff
(99.4 %id)
CR996991 T-Lymphocytes STIM2.a 607 to 1473 1 to 867       867/867
(100 %)
1 diff
(99.9 %id)
BX370810   STIM2.a 677 to 1539 1 to 863       863/868
(99 %)
7 diff
(99.2 %id)
TI_2194647107   STIM2.a 721 to 1807 1 to 1078       1078/1211
(89 %)
32 diff
(97.4 %id)
TI_1971559945   STIM2.a 722 to 1781 1 to 1061       1061/1061
(100 %)
15 diff
(98.6 %id)
CN429214 embryonic stem cells, cell lines H1, H7, andH9 STIM2.a 726 to 1441 1 to 716       716/716
(100 %)
3 diff
(99.6 %id)
W40569 Pancreas, pancreatic islet STIM2.a 766 to 1131 1 to 367     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 367/367
(100 %)
1 diff
(99.8 %id)
BP311787 brain STIM2.a 766 to 1347 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA774655 brain STIM2.a 851 to 1422 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BE158914 head_neck STIM2.a 860 to 1510 5 to 654       650/673
(96 %)
15 diff
(97.8 %id)
DA672470   STIM2.a 861 to 1431 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BE158910 head_neck STIM2.a 867 to 1441 20 to 594       575/594
(96 %)
10 diff
(98.4 %id)
BP201177 amygdala STIM2.a 899 to 1480 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
D63226   STIM2.a 996 to 1279 1 to 280       280/280
(100 %)
9 diff
(96.8 %id)
DB220879 trachea STIM2.a 998 to 1561 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
TI_2194647109   STIM2.a 1083 to 2050 1 to 972       972/1357
(71 %)
28 diff
(98.0 %id)
TI_1971559947   STIM2.a 1091 to 2125 10 to 1046       1037/1049
(98 %)
27 diff
(97.5 %id)
AA334307   STIM2.a 1410 to 1636 1 to 227       227/231
(98 %)
1 diff
(99.6 %id)
BF850441 lung_normal STIM2.a 1451 to 1651 1 to 202       202/202
(100 %)
6 diff
(97.1 %id)
TI_1971559949   STIM2.a 1501 to 2553 17 to 1056       1040/1056
(98 %)
42 diff
(96.1 %id)
TI_2194647095   STIM2.a 1508 to 2558 21 to 1058       1041/1333
(78 %)
45 diff
(96.7 %id)
BF993984 placenta_normal STIM2.a 1553 to 1951 8 to 408       399/408
(97 %)
9 diff
(97.8 %id)
BI002319 head_normal STIM2.a 1643 to 1888 13 to 257       247/257
(96 %)
9 diff
(96.5 %id)
AA210942   STIM2.a 1707 to 2130 1 to 424     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 424/424
(100 %)
0 diff
(100 %id)
AA211707.
matches multiple genes
  STIM2.a 1710 to 1767 1 to 58     also hits gene RCAN2 58/58
(100 %)
0 diff
(100 %id)
DA581643 lung STIM2.a 1714 to 2007 2 to 295   capped   294/294
(100 %)
2 diff
(99.4 %id)
AW805322 uterus STIM2.a 1762 to 2105 349 to 1       349/349
(100 %)
11 diff
(96.9 %id)
AW753212 colon STIM2.a 1766 to 2303 541 to 1       541/550
(98 %)
6 diff
(99.0 %id)
BG536659 lung STIM2.a 1771 to 2323 1 to 552       552/986
(55 %)
32 diff
(96.8 %id)
BE158911 head_neck STIM2.a 1839 to 2016 1 to 177       177/177
(100 %)
2 diff
(98.9 %id)
TI_1971559935   STIM2.a 1902 to 2922 1 to 1024       1024/1092
(93 %)
26 diff
(97.7 %id)
TI_2194647097   STIM2.a 1903 to 3167 1 to 1256       1256/1333
(94 %)
36 diff
(97.3 %id)
CR980705 T-Lymphocytes STIM2.a 2062 to 2814 1 to 752       752/752
(100 %)
1 diff
(99.9 %id)
BM926093 brain STIM2.a 2079 to 3045 16 to 999       984/1060
(92 %)
53 diff
(95.0 %id)
AI366036 brain, meningioma STIM2.a 2129 to 2469 95 to 435     Submitted on the opposite strand 341/435
(78 %)
6 diff
(98.7 %id)
BE158909 head_neck STIM2.a 2186 to 2308 127 to 5     Submitted on the opposite strand 123/127
(96 %)
0 diff
(100 %id)
DB330395   STIM2.a 2205 to 2745 544 to 1       544/544
(100 %)
3 diff
(99.5 %id)
AW891225 nervous_tumor STIM2.a 2220 to 2417 1 to 196       196/196
(100 %)
12 diff
(93.9 %id)
FN056401 breast carcinoma STIM2.a 2244 to 2315 78 to 8     Submitted on the opposite strand 71/78
(91 %)
1 diff
(98.8 %id)
TI_2194647099   STIM2.a 2259 to 3458 8 to 1201       1194/1292
(92 %)
47 diff
(96.4 %id)
BP422840 small intestine STIM2.a 2371 to 2874 1 to 506     Submitted on the opposite strand 506/506
(100 %)
3 diff
(99.5 %id)
T99965 liver and spleen STIM2.a 2394 to 2782 1 to 402       402/404
(99 %)
21 diff
(94.9 %id)
W01976 liver and spleen STIM2.a 2394 to 2808 1 to 410   fully sequenced,   410/410
(100 %)
7 diff
(98.3 %id)
TI_149311693   STIM2.a 2400 to 3267 940 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 856/955
(89 %)
22 diff
(97.7 %id)
AW891177 nervous_tumor STIM2.a 2444 to 2670 240 to 8       233/241
(96 %)
0 diff
(100 %id)
T97433 liver and spleen STIM2.a 2463 to 2723 1 to 251       251/251
(100 %)
19 diff
(92.5 %id)
TI_2194645739   STIM2.a 2490 to 3658 1230 to 67       1164/1289
(90 %)
0 diff
(100 %id)
BI850323 muscle (skeletal) STIM2.a 2496 to 3149 1 to 654       654/654
(100 %)
11 diff
(98.4 %id)
TI_1971555187   STIM2.a 2505 to 3651 1194 to 58     Submitted on the opposite strand 1137/1295
(87 %)
0 diff
(100 %id)
BM977475 lung, Primary Lung Cystic Fibrosis EpithelialCells STIM2.a 2520 to 3267 766 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 748/750
(99 %)
4 diff
(99.5 %id)
BG533712 Liver STIM2.a 2525 to 3068 1 to 554       554/709
(78 %)
23 diff
(96.8 %id)
C15571   STIM2.a 2541 to 2914 1 to 376       376/376
(100 %)
8 diff
(97.9 %id)
AA346850 heart STIM2.a 2581 to 2760 1 to 181       181/181
(100 %)
1 diff
(99.5 %id)
BM271818 Pancreas, Purified pancreatic islet STIM2.a 2591 to 3190 10 to 609       600/609
(98 %)
6 diff
(99.1 %id)
AA504293 germinal center B cell STIM2.a 2626 to 3012 1 to 387       387/387
(100 %)
0 diff
(100 %id)
CK824816 Pancreas, Purified pancreatic islet STIM2.a 2639 to 3186 1 to 549     Submitted on the opposite strand 549/549
(100 %)
3 diff
(99.5 %id)
CK430048 eye, lacrimal gland STIM2.a 2661 to 3266 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BM729292 eye, fetal eye STIM2.a 2673 to 3299 1 to 626   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 626/626
(100 %)
0 diff
(100 %id)
TI_149315635   STIM2.a 2745 to 3763 1079 to 83   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 997/1018
(97 %)
39 diff
(96.2 %id)
TI_1971559939   STIM2.a 2757 to 3546 15 to 808       794/812
(97 %)
16 diff
(98.1 %id)
W07500 lung STIM2.a 2760 to 3021 1 to 265       265/267
(99 %)
9 diff
(96.7 %id)
AI694503 carcinoid, lung STIM2.a 2777 to 3266 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AA489216.
matches multiple genes
germinal center B cell STIM2.a 2778 to 3276 499 to 1     also hits gene BLK 499/499
(100 %)
2 diff
(99.6 %id)
AA327725   STIM2.a 2779 to 3087 1 to 313       313/313
(100 %)
4 diff
(98.8 %id)
AW959917   STIM2.a 2780 to 3417 1 to 638       638/639
(99 %)
5 diff
(99.3 %id)
AA694146 liver and spleen STIM2.a 2785 to 3267 483 to 1       483/483
(100 %)
1 diff
(99.8 %id)
N68514 liver and spleen STIM2.a 2802 to 3268 466 to 1   fully sequenced,   466/466
(100 %)
6 diff
(98.8 %id)
AI076285 liver and spleen STIM2.a 2819 to 3267 449 to 1       449/449
(100 %)
1 diff
(99.8 %id)
AW016246   STIM2.a 2849 to 3267 436 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 419/419
(100 %)
1 diff
(99.8 %id)
BG501934 embryonal carcinoma, testis STIM2.a 2857 to 3718 1 to 851       851/871
(97 %)
42 diff
(95.2 %id)
CA311079 Human Lung Epithelial cells, lung STIM2.a 2866 to 3498 10 to 642     Submitted on the opposite strand 633/642
(98 %)
6 diff
(99.1 %id)
T07783   STIM2.a 2876 to 3258 386 to 1       386/388
(99 %)
4 diff
(99.0 %id)
AA642400 germinal center B cell STIM2.a 2885 to 3276 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AA805332 germinal center B cell STIM2.a 2887 to 3276 388 to 1       388/388
(100 %)
2 diff
(99.5 %id)
AA716133 heart STIM2.a 2888 to 3267 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
R00312 liver and spleen STIM2.a 2910 to 3260 363 to 9       355/377
(94 %)
0 diff
(100 %id)
AA705021 liver and spleen STIM2.a 2938 to 3267 330 to 1       330/330
(100 %)
0 diff
(100 %id)
T97323 liver and spleen STIM2.a 2962 to 3258 302 to 1       302/532
(56 %)
5 diff
(99.1 %id)
AW498605 brain STIM2.a 2976 to 3258 285 to 1       285/288
(98 %)
7 diff
(97.6 %id)
AW891906 nervous_tumor STIM2.a 2986 to 3347 12 to 370       359/370
(97 %)
6 diff
(98.4 %id)
AW891723 nervous_tumor STIM2.a 2989 to 3405 15 to 430       416/430
(96 %)
6 diff
(98.7 %id)
BQ343948 nervous_tumor STIM2.a 3025 to 3260 50 to 284       235/284
(82 %)
6 diff
(97.9 %id)
AA808025 germinal center B cell STIM2.a 3030 to 3276 247 to 1       247/247
(100 %)
0 diff
(100 %id)
AW994862 breast_normal STIM2.a 3039 to 3692 664 to 14     Submitted on the opposite strand 651/664
(98 %)
0 diff
(100 %id)
DA387408 thalamus STIM2.a 3041 to 3613 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
TI_1971559941   STIM2.a 3045 to 3651 1 to 610       610/1163
(52 %)
7 diff
(99.4 %id)
TI_2194647103   STIM2.a 3047 to 3658 3 to 616       614/1304
(47 %)
9 diff
(99.4 %id)
N29039 melanocyte STIM2.a 3095 to 3348 1 to 258   fully sequenced,   258/258
(100 %)
6 diff
(97.7 %id)
DB636696 testis STIM2.a 3121 to 3763 1 to 642     Submitted on the opposite strand 642/644
(99 %)
2 diff
(99.7 %id)
N74897 lung STIM2.a 3123 to 3267 145 to 1       145/145
(100 %)
0 diff
(100 %id)
BQ002514 Chondrosarcoma, Left Pelvis STIM2.a 3130 to 3757 642 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 627/627
(100 %)
1 diff
(99.9 %id)
CB306429 lung, Primary Lung Cystic Fibrosis EpithelialCells STIM2.a 3131 to 3763 652 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 634/634
(100 %)
2 diff
(99.7 %id)
BJ991202 hepatoblastoma STIM2.a 3162 to 3745 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
W60393 heart STIM2.a 3171 to 3636 1 to 468   fully sequenced,   468/468
(100 %)
2 diff
(99.6 %id)
CA431369 cell lines, Enchondroma STIM2.a 3233 to 3981 767 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 749/749
(100 %)
2 diff
(99.8 %id)
CK824817 Pancreas, Purified pancreatic islet STIM2.a 3256 to 3758 526 to 23     Submitted on the opposite strand 504/526
(95 %)
0 diff
(100 %id)
DB522351 testis STIM2.a 3257 to 3977 1 to 718     Submitted on the opposite strand 718/718
(100 %)
12 diff
(98.4 %id)
AA810184 germinal center B cell STIM2.a 3260 to 3757 509 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 498/498
(100 %)
0 diff
(100 %id)
BU741823 eye, fetal eye STIM2.a 3269 to 3983 731 to 17   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 715/715
(100 %)
1 diff
(99.9 %id)
AI627460 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus STIM2.a 3274 to 3763 490 to 1       490/490
(100 %)
0 diff
(100 %id)
BM264458 Pancreas, Purified pancreatic islet STIM2.a 3284 to 3757 490 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 474/474
(100 %)
1 diff
(99.8 %id)
AW057516 pooled STIM2.a 3294 to 3763 475 to 6       470/475
(98 %)
0 diff
(100 %id)
AA807436 germinal center B cell STIM2.a 3303 to 3757 468 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 455/455
(100 %)
1 diff
(99.8 %id)
AA760966 pooled germ cell tumors STIM2.a 3304 to 3758 463 to 9       455/463
(98 %)
0 diff
(100 %id)
AI359295 brain, glioblastoma (pooled) STIM2.a 3313 to 3757 461 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 445/445
(100 %)
11 diff
(97.6 %id)
N20662 melanocyte STIM2.a 3318 to 3757 440 to 1   fully sequenced,   440/440
(100 %)
0 diff
(100 %id)
N78642 lung STIM2.a 3319 to 3767 452 to 1       452/452
(100 %)
4 diff
(99.2 %id)
BQ018016 Fibrosarcoma STIM2.a 3325 to 3983 674 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 658/658
(100 %)
2 diff
(99.7 %id)
AA830300 germinal center B cell STIM2.a 3326 to 3758 442 to 10       433/442
(97 %)
0 diff
(100 %id)
AI359748 brain, glioblastoma (pooled) STIM2.a 3371 to 3757 417 to 31   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 387/387
(100 %)
11 diff
(97.2 %id)
AA832258 germinal center B cell STIM2.a 3372 to 3757 397 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 386/386
(100 %)
0 diff
(100 %id)
AA805451 germinal center B cell STIM2.a 3379 to 3765 417 to 31   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 387/388
(99 %)
1 diff
(99.8 %id)
R40086 whole brain STIM2.a 3388 to 3757 404 to 24   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 381/386
(98 %)
16 diff
(95.9 %id)
W81240 heart STIM2.a 3396 to 3759 1 to 367   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 367/367
(100 %)
4 diff
(99.0 %id)
BM930032 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3396 to 3981 1 to 586   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BM930121 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3396 to 3981 1 to 586   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BQ188056 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3396 to 3981 1 to 586   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BU928217 mixed (pool of 40 RNAs) STIM2.a 3397 to 3748 1 to 355       355/799
(44 %)
7 diff
(99.2 %id)
BE974015 Prostate STIM2.a 3417 to 3979 1 to 562       562/619
(90 %)
9 diff
(98.6 %id)
AW891718 nervous_tumor STIM2.a 3419 to 3660 9 to 259       251/259
(96 %)
6 diff
(97.7 %id)
AW891714 nervous_tumor STIM2.a 3423 to 3827 1 to 414       414/414
(100 %)
14 diff
(96.7 %id)
AI811796 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors STIM2.a 3423 to 3757 345 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 335/335
(100 %)
0 diff
(100 %id)
AW891721 nervous_tumor STIM2.a 3430 to 3837 27 to 433       407/433
(93 %)
6 diff
(98.7 %id)
AA620393 lung, lung carcinoma STIM2.a 3446 to 3728 283 to 1       283/470
(60 %)
0 diff
(100 %id)
AW515523 lymph node, lymphoma, follicular mixed small and largecell STIM2.a 3449 to 3763 319 to 5       315/319
(98 %)
0 diff
(100 %id)
AI684539 pooled STIM2.a 3463 to 3982 522 to 3       520/522
(99 %)
0 diff
(100 %id)
BG236631 normal head/neck tissue STIM2.a 3471 to 3757 352 to 62   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 291/303
(96 %)
10 diff
(96.7 %id)
AW891896 nervous_tumor STIM2.a 3473 to 3878 408 to 3       406/408
(99 %)
0 diff
(100 %id)
AW071701 anaplastic oligodendroglioma, brain STIM2.a 3503 to 3982 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AI890916 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus STIM2.a 3504 to 3978 477 to 3       475/477
(99 %)
0 diff
(100 %id)
AI924994 poorly differentiated adenocarcinoma withsignet ring cell features, stomach STIM2.a 3505 to 3982 479 to 2       478/479
(99 %)
0 diff
(100 %id)
DB522314 testis STIM2.a 3507 to 3977 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
AA449978   STIM2.a 3507 to 3763 263 to 7       257/263
(97 %)
0 diff
(100 %id)
BF361015 ovary STIM2.a 3511 to 3949 18 to 456       439/456
(96 %)
6 diff
(98.7 %id)
W81705 heart STIM2.a 3514 to 3757 248 to 1   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 248/248
(100 %)
1 diff
(99.6 %id)
AA879242 metastatic prostate bone lesion STIM2.a 3545 to 3791 8 to 254       247/254
(97 %)
6 diff
(97.7 %id)
AI281951 carcinoid, lung STIM2.a 3553 to 3981 443 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 429/429
(100 %)
2 diff
(99.6 %id)
AI039743   STIM2.a 3558 to 3984 432 to 6       427/432
(98 %)
0 diff
(100 %id)
AA888524 metastatic prostate bone lesion STIM2.a 3561 to 3984 1 to 424       424/426
(99 %)
5 diff
(98.9 %id)
W40570 Pancreas, pancreatic islet STIM2.a 3589 to 3977 412 to 22   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 391/391
(100 %)
2 diff
(99.5 %id)
AA244214   STIM2.a 3600 to 3939 1 to 340       340/340
(100 %)
2 diff
(99.5 %id)
W60302 heart STIM2.a 3606 to 4001 397 to 1   tiling clone, fully sequenced,   397/397
(100 %)
2 diff
(99.5 %id)
AI015736   STIM2.a 3616 to 3978 366 to 4       363/366
(99 %)
0 diff
(100 %id)
BQ185236 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3617 to 3980 383 to 20   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 364/364
(100 %)
0 diff
(100 %id)
AA243982   STIM2.a 3620 to 3982 379 to 17       363/379
(95 %)
0 diff
(100 %id)
BE048395 Kidney STIM2.a 3655 to 3977 343 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 323/323
(100 %)
0 diff
(100 %id)
AI270105 esophagus, squamous cell carcinoma STIM2.a 3656 to 3976 320 to 1       320/320
(100 %)
10 diff
(96.9 %id)
BU743230 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3673 to 3980 327 to 20   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 308/308
(100 %)
0 diff
(100 %id)
BM684750 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.a 3673 to 3980 327 to 20   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 308/308
(100 %)
0 diff
(100 %id)
AI865077 lymph node, lymphoma, follicular mixed small and largecell STIM2.a 3735 to 3982 253 to 7       247/253
(97 %)
0 diff
(100 %id)
BQ343947 nervous_tumor STIM2.a 3772 to 3884 116 to 5       112/116
(96 %)
0 diff
(100 %id)
AW891885 nervous_tumor STIM2.a 3774 to 3873 16 to 113       98/113
(86 %)
13 diff
(88.5 %id)
AA209464   STIM2.a 3853 to 3977 155 to 31   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 125/125
(100 %)
0 diff
(100 %id)
BJ991203 hepatoblastoma STIM2.a 4624 to 5163 540 to 1   tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
AF328905   STIM2.b 1 to 3955 1 to 3955 H59Y P68R tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3955/3955
(100 %)
6 diff
(99.9 %id)
NM_020860.3   STIM2.b 3 to 5156 1 to 5154 exact RefSeq,   5154/5154
(100 %)
1 diff
(100.0 %id)
AB040915   STIM2.b 315 to 5156 1 to 4841   tiling clone, available from KIAA,   4841/4841
(100 %)
2 diff
(100.0 %id)
AL136577 amygdala STIM2.b 460 to 3735 1 to 3277   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3277/3277
(100 %)
4 diff
(99.9 %id)
BC015659 Eye, normal, pigmented retinal epithelium STIM2.b 1104 to 3735 1 to 2633   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2633/2633
(100 %)
2 diff
(100.0 %id)
BC057231 Pooled, 40 cell lines STIM2.b 1453 to 3245 4 to 1796   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1793/1793
(100 %)
0 diff
(100 %id)
NM_001169117.1   STIM2.c 1 to 5222 1 to 5222 exact RefSeq,   5222/5222
(100 %)
1 diff
(100.0 %id)
BC146661 Donated clones,Novartis FGA collection STIM2.c 104 to 4027 1 to 3923 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3923/3923
(100 %)
3 diff
(100.0 %id)
BC152554 Donated clones,Novartis FGA collection STIM2.c 104 to 4027 1 to 3923 exact AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3923/3923
(100 %)
3 diff
(100.0 %id)
CX873758 embryonic stem STIM2.c 998 to 1841 1 to 844       844/844
(100 %)
1 diff
(99.9 %id)
BG749672 eye, normal pigmented retinal epithelium STIM2.c 1100 to 1777 1 to 684   available from MGC,   684/688
(99 %)
12 diff
(98.3 %id)
BG748892 eye, normal pigmented retinal epithelium STIM2.c 1101 to 1702 1 to 600       600/600
(100 %)
5 diff
(99.2 %id)
DA293159 hippocampus STIM2.c 1259 to 1824 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AW583088 Islets of Langerhans, Pancreas STIM2.c 1282 to 1899 1 to 618       618/618
(100 %)
4 diff
(99.4 %id)
BP310883 brain STIM2.c 1298 to 1881 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
CN429215 embryonic stem cells, DMSO-treated H9 cellline STIM2.c 1381 to 2115 1 to 735       735/735
(100 %)
0 diff
(100 %id)
AU134169 ovary, tumor tissue STIM2.c 1406 to 2205 2 to 796   capped   795/796
(99 %)
9 diff
(98.9 %id)
BU597495 mixed (pool of 40 RNAs) STIM2.c 1449 to 1973 1 to 532   available from MGC,   532/957
(55 %)
15 diff
(98.5 %id)
DA680733 ovary STIM2.c 1631 to 2183 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AU155266 ovary, tumor tissue STIM2.c 3291 to 3801 510 to 1       510/560
(91 %)
5 diff
(99.2 %id)
AK023369 ovary, tumor tissue STIM2.d 1 to 2447 2 to 1837 V302A tiling clone, available from FLJ, Suspected internal deletion 1837/1837
(100 %)
4 diff
(99.8 %id)
TI_149298658   STIM2.e 1 to 881 966 to 95 F7L E8N L9E R10K S11Q ... tiling clone, AAA   872/972
(89 %)
18 diff
(98.2 %id)
BM975376 lung, Primary Lung Cystic Fibrosis EpithelialCells STIM2.e 198 to 881 699 to 19   AAA   681/681
(100 %)
4 diff
(99.5 %id)
CA314744 Human Lung Epithelial cells, lung STIM2.e 199 to 881 701 to 19   tiling clone, AAA   683/683
(100 %)
1 diff
(99.9 %id)
BP352973   STIM2.e 305 to 907 1 to 603   tiling clone,   603/603
(100 %)
0 diff
(100 %id)
BQ184101 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.e 464 to 885 440 to 19   AAA   422/425
(99 %)
4 diff
(99.1 %id)
TI_151809354   STIM2.e 470 to 885 79 to 494   AAA   416/416
(100 %)
1 diff
(99.8 %id)
AI613267 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus STIM2.e 520 to 968 451 to 5   tiling clone,   447/451
(99 %)
2 diff
(99.6 %id)
TI_1971559937   STIM2.e 711 to 1955 9 to 1255       1247/1314
(94 %)
62 diff
(95.3 %id)
AL707230 human skeletal muscle STIM2.e 1142 to 1668 1 to 527   tiling clone,   527/527
(100 %)
2 diff
(99.7 %id)
AA251144 germinal center B cell STIM2.e 1235 to 1609 375 to 1       375/375
(100 %)
1 diff
(99.8 %id)
DB231256 trachea STIM2.e 1668 to 2232 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
AW978381   STIM2.e 1738 to 2424 687 to 1     Submitted on the opposite strand 687/687
(100 %)
1 diff
(99.9 %id)
DA227078 brain STIM2.e 1852 to 2384 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
AA909229 pooled STIM2.e 1873 to 2425 553 to 1   tiling clone,   553/553
(100 %)
0 diff
(100 %id)
AW770851 colon, juvenile granulosa tumor STIM2.e 1910 to 2425 516 to 1       516/516
(100 %)
0 diff
(100 %id)
AA808325 germinal center B cell STIM2.e 1990 to 2174 185 to 1       185/185
(100 %)
0 diff
(100 %id)
BM449558 melanotic melanoma, skin STIM2.f 1 to 883 1 to 879   tiling clone,   879/1114
(78 %)
10 diff
(99.2 %id)
AW025860 thymus, pooled STIM2.f 820 to 1261 443 to 1   tiling clone,   443/455
(97 %)
12 diff
(97.4 %id)
BM906557 ovary (pool of 3) STIM2.g-u 1 to 768 1 to 766 A2D A3R A4R R5A G6A ... tiling clone,   766/1116
(68 %)
44 diff
(96.1 %id)
BM906558 ovary (pool of 3) STIM2.g-u 3 to 861 1 to 864 A2G A3S P10L S11R tiling clone,   864/1165
(74 %)
6 diff
(99.5 %id)
BM554696 duodenal adenocarcinoma, cell line, small intestine STIM2.g-u 25 to 1024 5 to 1019       1015/1101
(92 %)
51 diff
(95.4 %id)
TI_57150027   STIM2.g-u 39 to 734 56 to 748       693/748
(92 %)
10 diff
(98.7 %id)
BI763361 pooled colon, kidney, stomach STIM2.g-u 48 to 734 1 to 684   tiling clone,   684/684
(100 %)
5 diff
(99.3 %id)
DA738675   STIM2.g-u 107 to 688 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
TI_57172201   STIM2.g-u 135 to 887 23 to 786       764/789
(96 %)
28 diff
(96.5 %id)
BI831538 brain, medulla STIM2.g-u 144 to 887 1 to 756       756/759
(99 %)
25 diff
(96.8 %id)
CN359856 embryonic stem cells, DMSO-treated H9 cellline STIM2.g-u 165 to 851 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
BF110915 carcinoid, lung STIM2.g-u 273 to 684 413 to 1       413/413
(100 %)
7 diff
(98.4 %id)
AA887196 Kidney STIM2.g-u 309 to 681 373 to 1       373/373
(100 %)
2 diff
(99.5 %id)
CB250522 Human Lung Epithelial cells, lung STIM2.g-u 516 to 1316 811 to 15   tiling clone, AAA   797/801
(99 %)
5 diff
(99.4 %id)
CN359857 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 STIM2.g-u 621 to 1089 1 to 463       463/463
(100 %)
3 diff
(99.4 %id)
AI968255 pooled germ cell tumors STIM2.g-u 798 to 1316 519 to 1   tiling clone,   519/519
(100 %)
1 diff
(99.9 %id)
DA177480 amygdala STIM2.h 1 to 473 2 to 475 exact tiling clone, capped   474/474
(100 %)
1 diff
(99.8 %id)
DT218924 brain STIM2.i-u 1 to 528 1 to 528   tiling clone,   528/528
(100 %)
1 diff
(99.9 %id)
Z45520 brain, total brain STIM2.i-u 227 to 560 1 to 333       333/334
(99 %)
3 diff
(99.2 %id)
R13405 whole brain STIM2.i-u 228 to 558 1 to 337       337/458
(73 %)
10 diff
(97.9 %id)
H23402 whole brain STIM2.i-u 228 to 689 1 to 466     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 466/472
(98 %)
6 diff
(98.8 %id)
BC043604 Ovary, pooled from 3 adults STIM2.i-u 403 to 1889 1 to 1489 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1489/1489
(100 %)
1 diff
(100.0 %id)
BM805053 ovary (pool of 3) STIM2.i-u 404 to 1116 1 to 717 exact available from MGC, AAA   717/1075
(66 %)
8 diff
(99.3 %id)
H23291 whole brain STIM2.i-u 1525 to 1883 388 to 23   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 366/366
(100 %)
10 diff
(97.3 %id)
Z41735 brain, total brain STIM2.i-u 1583 to 1883 301 to 1       301/301
(100 %)
0 diff
(100 %id)
DA484055 brain STIM2.j-u 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
TI_57152924   STIM2.j-u 218 to 785 68 to 634       567/636
(89 %)
2 diff
(99.7 %id)
BI765035 pooled colon, kidney, stomach STIM2.j-u 219 to 785 1 to 567       567/569
(99 %)
3 diff
(99.5 %id)
R36393 placenta STIM2.j-u 247 to 587 1 to 349       349/416
(83 %)
9 diff
(97.9 %id)
BM932168 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.j-u 524 to 1243 1 to 719 R31X tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 719/719
(100 %)
2 diff
(99.8 %id)
R28541 placenta STIM2.j-u 651 to 1030 1 to 384 L42A F43V S44F V45Q R46S ...     384/384
(100 %)
13 diff
(96.7 %id)
BX092522 placenta STIM2.j-u 653 to 1243 1 to 590 exact AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 590/590
(100 %)
2 diff
(99.7 %id)
AA229347   STIM2.j-u 709 to 988 1 to 280       280/280
(100 %)
5 diff
(98.3 %id)
BM685168 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STIM2.j-u 747 to 1261 515 to 1 exact tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 515/515
(100 %)
2 diff
(99.7 %id)
N48266 multiple sclerosis lesions STIM2.j-u 822 to 1243 424 to 1       424/426
(99 %)
8 diff
(98.2 %id)
AI377788 pooled STIM2.j-u 826 to 1243 418 to 1       418/418
(100 %)
0 diff
(100 %id)
AA811941 germinal center B cell STIM2.j-u 908 to 1250 344 to 1       344/344
(100 %)
3 diff
(99.2 %id)
R36122 placenta STIM2.j-u 916 to 1224 316 to 1       316/324
(97 %)
19 diff
(94.2 %id)
AI240742 liver and spleen STIM2.j-u 932 to 1243 312 to 1       312/312
(100 %)
0 diff
(100 %id)
AI632001 Kidney STIM2.j-u 1005 to 1569 563 to 1   tiling clone,   563/563
(100 %)
1 diff
(99.9 %id)
CD652076 Embryonic Stem cells STIM2.k-u 1 to 807 12 to 817   tiling clone,   806/817
(98 %)
6 diff
(99.3 %id)
FN072285 breast carcinoma STIM2.k-u 538 to 625 1 to 86       86/87
(98 %)
3 diff
(96.6 %id)
AA747916 germinal center B cell STIM2.k-u 545 to 1204 646 to 3 T5S L10* tiling clone,   644/702
(91 %)
0 diff
(100 %id)
AA748043 germinal center B cell STIM2.k-u 691 to 1202 513 to 1 exact     513/513
(100 %)
1 diff
(99.9 %id)
AA251168.
matches multiple genes
germinal center B cell STIM2.k-u 740 to 1114 1 to 376 exact tiling clone, also hits gene florskubu, tershey 376/376
(100 %)
1 diff
(99.8 %id)
DA860871 placenta STIM2.l-u 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
BP218790 caudate nucleus STIM2.m 1 to 559 1 to 559 exact tiling clone,   559/582
(96 %)
2 diff
(99.7 %id)
DB136704 thymus STIM2.n-u 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
1 diff
(99.9 %id)
DB315078 brain STIM2.o-u 1 to 536 537 to 1 exact tiling clone,   537/537
(100 %)
1 diff
(99.9 %id)
CB242304 Human Lung Epithelial cells, lung STIM2.p 1 to 405 420 to 15 exact tiling clone, AAA   406/415
(97 %)
1 diff
(99.8 %id)
AW884580 ovary STIM2.p 13 to 270 266 to 12 exact     255/277
(92 %)
2 diff
(99.3 %id)
AW884497 ovary STIM2.p 16 to 274 15 to 272 exact tiling clone,   258/274
(94 %)
10 diff
(96.4 %id)
TI_2194646303   Gene STIM2, variant not shown         Suspected internal deletion, this clone was ignored    
BG548581 lung Gene STIM2, variant not shown         Suspected internal deletion, this clone was ignored    
BI559936 testis Gene STIM2, variant not shown         This clone was ignored    
TI_44348418   Gene STIM2, variant not shown         This clone was ignored    
BP347119 brain Gene STIM2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i-u, .j-u, .k-u, .l-u, .m, .n-u, .o-u, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI