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Gene STAT1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
454 representative clones for gene STAT1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK292604 testis STAT1.a 1 to 3097 1 to 3097 S307G tiling clone,   3097/3097
(100 %)
2 diff
(100.0 %id)
DC399802 testis STAT1.a 1 to 552 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DC404318 testis STAT1.a 1 to 571 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC399943 testis STAT1.a 5 to 570 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DA242011 brain STAT1.a 261 to 832 11 to 583   capped   573/582
(98 %)
7 diff
(98.8 %id)
CR618286 fetal liver STAT1.a 867 to 3668 1 to 2802   tiling clone,   2802/2802
(100 %)
0 diff
(100 %id)
DA313984 hippocampus STAT1.b 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
NM_007315.3   STAT1.b 1 to 4308 1 to 4308 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 4308/4308
(100 %)
0 diff
(100 %id)
DA020186   STAT1.b 25 to 585 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA211796 brain STAT1.b 25 to 586 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA337403 hippocampus STAT1.b 25 to 597 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA337583 hippocampus STAT1.b 39 to 631 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
CR998778 T-Lymphocytes STAT1.b 41 to 769 1 to 729       729/729
(100 %)
0 diff
(100 %id)
DA253063 caudate nucleus STAT1.b 55 to 623 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA758751   STAT1.b 55 to 602 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA995507 synovial membrane tissue from rheumatioidarthritis STAT1.b 55 to 622 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB064555 testis STAT1.b 55 to 639 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB215423 trachea STAT1.b 55 to 600 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB225434 trachea STAT1.b 55 to 614 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB289724 uterus STAT1.b 55 to 641 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA112442 cerebellum STAT1.b 63 to 642 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA193502 amygdala STAT1.b 63 to 664 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA726601   STAT1.b 63 to 625 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB065660 testis STAT1.b 63 to 631 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB067789 testis STAT1.b 63 to 622 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB213617 trachea STAT1.b 63 to 608 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB135641 thymus STAT1.b 66 to 625 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA239418 brain STAT1.b 67 to 647 8 to 588   capped   581/581
(100 %)
0 diff
(100 %id)
DB088938 testis STAT1.b 68 to 613 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA500560 brain STAT1.b 71 to 651 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA755823   STAT1.b 74 to 645 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA309166 hippocampus STAT1.b 76 to 639 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA389894 thalamus STAT1.b 77 to 668 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA106258 cerebellum STAT1.b 80 to 636 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA193455 amygdala STAT1.b 80 to 660 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA226324 brain STAT1.b 80 to 741 2 to 664   capped   663/663
(100 %)
1 diff
(99.9 %id)
DA243480 brain STAT1.b 80 to 647 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA311631 hippocampus STAT1.b 80 to 634 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA553753   STAT1.b 80 to 631 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA804723 brain STAT1.b 80 to 653 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA935018 Spleen STAT1.b 80 to 640 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA939689 Spleen STAT1.b 80 to 667 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB089614 testis STAT1.b 80 to 643 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB095014 testis STAT1.b 80 to 670 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB226086 trachea STAT1.b 80 to 676 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
CN410736 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells STAT1.b 82 to 687 1 to 606       606/606
(100 %)
0 diff
(100 %id)
DB226933 trachea STAT1.b 83 to 670 2 to 589   capped   588/589
(99 %)
0 diff
(100 %id)
AK315002 placenta STAT1.b 86 to 2641 1 to 2556 exact     2556/2556
(100 %)
1 diff
(100.0 %id)
DA418268 thalamus STAT1.b 87 to 647 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB200787 trachea STAT1.b 87 to 674 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB110982 thymus STAT1.b 88 to 652 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA407861 thalamus STAT1.b 90 to 635 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA460836 tongue, tumor tissue STAT1.b 91 to 655 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA547754   STAT1.b 91 to 657 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA722669   STAT1.b 91 to 668 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB099373 testis STAT1.b 91 to 696 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
DB232239 trachea STAT1.b 91 to 685 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA045566 bladder STAT1.b 92 to 659 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA328657 hippocampus STAT1.b 92 to 649 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA725517   STAT1.b 92 to 643 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA855696 placenta STAT1.b 92 to 656 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB123726 thymus STAT1.b 92 to 723 2 to 633   capped   632/632
(100 %)
0 diff
(100 %id)
DB215656 trachea STAT1.b 92 to 652 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB218647 trachea STAT1.b 92 to 661 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB226673 trachea STAT1.b 92 to 668 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB232502 trachea STAT1.b 92 to 661 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CA398017 eye, RPE/choroid STAT1.b 93 to 744 1 to 652     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 652/652
(100 %)
1 diff
(99.9 %id)
AL041189 testis STAT1.b 93 to 666 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DB221307 trachea STAT1.b 93 to 640 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
CR749636 retina STAT1.b 94 to 4076 1 to 3983 Q718R available from DKFZ, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3983/3983
(100 %)
6 diff
(99.9 %id)
DA339251 hippocampus STAT1.b 97 to 670 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA189899 amygdala STAT1.b 98 to 669 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA323119 hippocampus STAT1.b 98 to 660 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA725598   STAT1.b 98 to 655 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA782603 brain STAT1.b 98 to 665 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA864678 placenta STAT1.b 98 to 676 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA960925 Spleen STAT1.b 98 to 644 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA990131 synovial membrane tissue from rheumatioidarthritis STAT1.b 98 to 651 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB159342 thymus STAT1.b 98 to 646 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB185522 liver, tumor tissue STAT1.b 98 to 662 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB220128 trachea STAT1.b 98 to 662 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB280371 uterus STAT1.b 98 to 643 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB290770 uterus STAT1.b 98 to 667 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BQ929939 leiomyosarcoma, uterus STAT1.b 100 to 1026 1 to 930       930/931
(99 %)
17 diff
(98.2 %id)
BE382657 brain, neuroblastoma STAT1.b 101 to 759 1 to 659       659/696
(94 %)
2 diff
(99.8 %id)
BQ219209 leiomyosarcoma, uterus STAT1.b 109 to 929 1 to 823       823/966
(85 %)
7 diff
(99.3 %id)
BQ441149 leiomyosarcoma, uterus STAT1.b 114 to 862 1 to 754       754/925
(81 %)
22 diff
(97.7 %id)
BE891509 melanotic melanoma, skin STAT1.b 125 to 736 1 to 612       612/612
(100 %)
0 diff
(100 %id)
EB388739 eye, optic nerve STAT1.b 126 to 876 1 to 751       751/751
(100 %)
0 diff
(100 %id)
CT000543 T-Lymphocytes STAT1.b 224 to 920 1 to 704       704/705
(99 %)
9 diff
(98.8 %id)
CR977310 T-Lymphocytes STAT1.b 224 to 938 1 to 715       715/731
(97 %)
0 diff
(100 %id)
CR987624 T-Lymphocytes STAT1.b 224 to 897 1 to 673       673/680
(98 %)
3 diff
(99.6 %id)
CR986452 T-Lymphocytes STAT1.b 224 to 840 1 to 617       617/621
(99 %)
2 diff
(99.7 %id)
CR974849 T-Lymphocytes STAT1.b 224 to 793 1 to 570       570/570
(100 %)
0 diff
(100 %id)
CR981726 T-Lymphocytes STAT1.b 224 to 885 1 to 666       666/671
(99 %)
6 diff
(99.2 %id)
CR980755 T-Lymphocytes STAT1.b 224 to 1022 1 to 798       798/821
(97 %)
3 diff
(99.7 %id)
CR999381 T-Lymphocytes STAT1.b 224 to 936 1 to 713       713/713
(100 %)
0 diff
(100 %id)
CR992803 T-Lymphocytes STAT1.b 224 to 808 1 to 585       585/586
(99 %)
1 diff
(99.9 %id)
CR990195 T-Lymphocytes STAT1.b 224 to 927 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
CR986678 T-Lymphocytes STAT1.b 224 to 850 1 to 629       629/632
(99 %)
3 diff
(99.6 %id)
CR998354 T-Lymphocytes STAT1.b 224 to 924 1 to 698       698/710
(98 %)
5 diff
(99.3 %id)
CT000029 T-Lymphocytes STAT1.b 224 to 1031 1 to 809       809/818
(98 %)
5 diff
(99.4 %id)
CR990125 T-Lymphocytes STAT1.b 224 to 848 1 to 625       625/625
(100 %)
0 diff
(100 %id)
BQ710160 Spleen STAT1.b 232 to 952 1 to 726       726/844
(86 %)
6 diff
(99.3 %id)
BQ710422 Spleen STAT1.b 232 to 1107 1 to 876       876/881
(99 %)
1 diff
(99.9 %id)
M97935 cultured cells STAT1.b 233 to 4194 41 to 4003 exact tiling clone,   3963/4003
(99 %)
9 diff
(99.8 %id)
DA555176   STAT1.b 245 to 793 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
CX786712 human embryonic stem cells STAT1.b 288 to 1096 1 to 809       809/809
(100 %)
0 diff
(100 %id)
DB098198 testis STAT1.b 295 to 885 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
BU194831 melanotic melanoma, skin STAT1.b 317 to 1100 1 to 788       788/846
(93 %)
8 diff
(99.1 %id)
GU211347   STAT1.b 325 to 2677 1 to 2353 A46T     2353/2353
(100 %)
1 diff
(100.0 %id)
BU538271 adenocarcinoma, cell line, breast STAT1.b 366 to 1314 1 to 953       953/953
(100 %)
13 diff
(98.7 %id)
CR994105 T-Lymphocytes STAT1.b 383 to 1311 1 to 932       932/932
(100 %)
6 diff
(99.4 %id)
BT007241   STAT1.b 389 to 2526 1 to 2138       2138/2139
(99 %)
1 diff
(100.0 %id)
CV026251 mixed STAT1.b 389 to 995 1 to 607       607/607
(100 %)
0 diff
(100 %id)
BQ957446 large cell carcinoma, lung STAT1.b 418 to 1356 1 to 940       940/940
(100 %)
8 diff
(99.2 %id)
BX414571 thymus STAT1.b 436 to 1420 1 to 978       978/978
(100 %)
11 diff
(98.9 %id)
DA724242   STAT1.b 464 to 1019 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CR996200 T-Lymphocytes STAT1.b 608 to 1485 1 to 877       877/879
(99 %)
2 diff
(99.8 %id)
BQ213258 large cell carcinoma, lung STAT1.b 617 to 1332 1 to 714       714/944
(75 %)
4 diff
(99.6 %id)
BX490196   STAT1.b 629 to 1289 1 to 660       660/660
(100 %)
1 diff
(99.9 %id)
DA102294 cerebellum STAT1.b 636 to 1188 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CA391980 eye, RPE/choroid STAT1.b 645 to 1313 1 to 669       669/669
(100 %)
0 diff
(100 %id)
DB156541 thymus STAT1.b 650 to 1229 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA041050 bladder STAT1.b 657 to 1223 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BC141921 PCR rescued clones, C list STAT1.b 665 to 1151 1 to 486       486/494
(98 %)
9 diff
(98.2 %id)
DB112757 thymus STAT1.b 683 to 1247 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BF095462 uterus_tumor STAT1.b 688 to 1044 357 to 1       357/357
(100 %)
5 diff
(98.6 %id)
DB220119 trachea STAT1.b 693 to 1249 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA196074 amygdala STAT1.b 702 to 1263 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA718604   STAT1.b 756 to 1301 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
CR995361 T-Lymphocytes STAT1.b 776 to 1548 1 to 773       773/780
(99 %)
1 diff
(99.9 %id)
BF086322 placenta_normal STAT1.b 785 to 921 139 to 3       137/139
(98 %)
0 diff
(100 %id)
CR992488 T-Lymphocytes STAT1.b 788 to 1553 1 to 765       765/765
(100 %)
1 diff
(99.9 %id)
AL564674 brain, fetal liver, Liver, neuroblastoma cells STAT1.b 823 to 1461 1 to 639       639/639
(100 %)
0 diff
(100 %id)
DA451156 tongue, tumor tissue STAT1.b 855 to 1409 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CU447651 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
0 diff
(100 %id)
CU449536 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
0 diff
(100 %id)
CU450393 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
0 diff
(100 %id)
CU450685 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
0 diff
(100 %id)
CU452124 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
0 diff
(100 %id)
CU456141 epidermis STAT1.b 949 to 1318 377 to 8     Submitted on the opposite strand 370/389
(95 %)
1 diff
(99.8 %id)
BM786890 stomach STAT1.b 996 to 1622 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BQ937947 leiomyosarcoma, uterus STAT1.b 1021 to 1888 1 to 873       873/917
(95 %)
14 diff
(98.5 %id)
CN410741 embryonic stem cells, cell lines H1, H7, andH9 STAT1.b 1043 to 1693 1 to 651       651/654
(99 %)
1 diff
(99.9 %id)
FN164513 breast carcinoma STAT1.b 1073 to 1163 93 to 3     Submitted on the opposite strand 91/93
(97 %)
0 diff
(100 %id)
AW993691 breast_normal STAT1.b 1104 to 1806 707 to 10     Submitted on the opposite strand 698/708
(98 %)
10 diff
(98.6 %id)
DA431898 colon STAT1.b 1159 to 1735 2 to 578   capped   577/578
(99 %)
0 diff
(100 %id)
BM917131 blood, natural killer cells, cell line STAT1.b 1192 to 2142 1 to 955       955/1100
(86 %)
15 diff
(98.7 %id)
CD624042   STAT1.b 1213 to 1828 626 to 11       616/633
(97 %)
1 diff
(99.9 %id)
DA262392 caudate nucleus STAT1.b 1242 to 1814 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB129352 thymus STAT1.b 1255 to 1800 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BQ379097 uterus_tumor STAT1.b 1281 to 1489 209 to 1       209/209
(100 %)
0 diff
(100 %id)
CR994607 T-Lymphocytes STAT1.b 1282 to 2105 1 to 822       822/822
(100 %)
2 diff
(99.8 %id)
DA952415 Spleen STAT1.b 1419 to 1985 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CV571870 cornea, eye STAT1.b 1437 to 2012 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CB148144 Liver STAT1.b 1442 to 2006 1 to 565       565/565
(100 %)
0 diff
(100 %id)
CB153152 brain STAT1.b 1446 to 2006 1 to 561       561/561
(100 %)
0 diff
(100 %id)
CB151854 cervix, Uterine STAT1.b 1452 to 2134 1 to 683       683/683
(100 %)
0 diff
(100 %id)
DB012371 esophageal, tumor tissue STAT1.b 1455 to 2011 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA550851   STAT1.b 1475 to 2251 2 to 777   capped   776/785
(98 %)
6 diff
(99.3 %id)
DA956387 Spleen STAT1.b 1535 to 2115 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA872626 Prostate STAT1.b 1572 to 2136 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BQ434711 leiomyosarcoma, uterus STAT1.b 1594 to 2447 1 to 855       855/871
(98 %)
10 diff
(98.9 %id)
AW801685 uterus STAT1.b 1609 to 2011 406 to 5       402/406
(99 %)
1 diff
(99.8 %id)
CB158922 Liver STAT1.b 1644 to 2240 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DA975891 synovial membrane tissue from rheumatioidarthritis STAT1.b 1666 to 2216 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA849947 placenta STAT1.b 1691 to 2244 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CN410742 embryonic stem cells, DMSO-treated H9 cellline STAT1.b 1740 to 2358 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
AW390472 stomach STAT1.b 1804 to 2405 600 to 3       598/600
(99 %)
2 diff
(99.7 %id)
FN045943 breast carcinoma STAT1.b 1834 to 1886 53 to 1     Submitted on the opposite strand 53/57
(92 %)
0 diff
(100 %id)
DA552830   STAT1.b 1839 to 2399 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BI092633 cervix STAT1.b 1885 to 2647 1 to 762       762/762
(100 %)
2 diff
(99.8 %id)
DA719948   STAT1.b 1885 to 2447 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA559309   STAT1.b 1890 to 2447 2 to 559   capped   558/559
(99 %)
0 diff
(100 %id)
DA587008 lung STAT1.b 1906 to 2506 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
AW807942 stomach STAT1.b 1978 to 2313 339 to 5       335/339
(98 %)
1 diff
(99.8 %id)
DA753250   STAT1.b 1996 to 2551 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CX166526 human embryonic stem cells differentiated toan early endodermal cell type STAT1.b 2000 to 2741 1 to 742       742/742
(100 %)
0 diff
(100 %id)
CN410749 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 STAT1.b 2034 to 2606 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BG678000 skin, squamous cell carcinoma STAT1.b 2062 to 2829 1 to 768       768/769
(99 %)
1 diff
(99.9 %id)
DA645282   STAT1.b 2111 to 2705 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
BG288139 bladder, transitional cell papilloma, cell line STAT1.b 2112 to 2846 1 to 735       735/736
(99 %)
3 diff
(99.6 %id)
BG171693 hypernephroma, cell line, Kidney STAT1.b 2116 to 2844 1 to 730       730/939
(77 %)
7 diff
(99.3 %id)
FN155703 breast carcinoma STAT1.b 2124 to 2217 95 to 1     Submitted on the opposite strand 95/95
(100 %)
1 diff
(99.0 %id)
FN057463 breast carcinoma STAT1.b 2149 to 2208 61 to 1     Submitted on the opposite strand 61/62
(98 %)
2 diff
(96.8 %id)
DB030724 testis STAT1.b 2162 to 2756 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
CN410738 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 STAT1.b 2178 to 2882 1 to 706       706/706
(100 %)
2 diff
(99.8 %id)
DB042168 testis STAT1.b 2266 to 2844 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BF742018 bocio_tumor STAT1.b 2267 to 2677 420 to 9     Submitted on the opposite strand 412/420
(98 %)
3 diff
(99.3 %id)
FN091263 breast carcinoma STAT1.b 2279 to 2362 85 to 1     Submitted on the opposite strand 85/85
(100 %)
1 diff
(98.9 %id)
BQ379057 uterus_tumor STAT1.b 2283 to 2613 339 to 8       332/339
(97 %)
1 diff
(99.8 %id)
BG400682 Kidney STAT1.b 2345 to 3147 1 to 800       800/810
(98 %)
13 diff
(98.4 %id)
BI823290 pooled brain, lung, testis STAT1.b 2380 to 3212 1 to 837       837/837
(100 %)
11 diff
(98.7 %id)
AW363723 colon STAT1.b 2401 to 2886 497 to 6       489/497
(98 %)
11 diff
(97.8 %id)
BF817377 colon_ins STAT1.b 2423 to 2953 543 to 14     Submitted on the opposite strand 530/543
(97 %)
1 diff
(99.9 %id)
AA143208 Pancreas STAT1.b 2433 to 2769 1 to 338   fully sequenced,   338/338
(100 %)
1 diff
(99.8 %id)
FN049512 breast carcinoma STAT1.b 2531 to 2623 94 to 1     Submitted on the opposite strand 94/94
(100 %)
1 diff
(99.0 %id)
AA143346 Pancreas STAT1.b 2560 to 2767 208 to 1   fully sequenced,   208/208
(100 %)
0 diff
(100 %id)
BE810773 amnion_normal STAT1.b 2594 to 2802 270 to 61       210/270
(77 %)
0 diff
(100 %id)
AW835017 leiomios STAT1.b 2636 to 2799 169 to 4       166/169
(98 %)
0 diff
(100 %id)
BF093706 uterus STAT1.b 2650 to 3204 560 to 4       557/560
(99 %)
0 diff
(100 %id)
BF769522 epid_tumor STAT1.b 2654 to 3202 555 to 7     Submitted on the opposite strand 549/559
(98 %)
0 diff
(100 %id)
BF096058 uterus_tumor STAT1.b 2666 to 3207 539 to 3       537/539
(99 %)
0 diff
(100 %id)
BQ378915 uterus_tumor STAT1.b 2666 to 3193 542 to 16       527/542
(97 %)
0 diff
(100 %id)
BF096020 uterus_tumor STAT1.b 2678 to 3161 484 to 2       483/488
(98 %)
0 diff
(100 %id)
BF911925 uterus_tumor STAT1.b 2678 to 3206 529 to 5     Submitted on the opposite strand 525/534
(98 %)
0 diff
(100 %id)
BQ378926 uterus_tumor STAT1.b 2678 to 2985 304 to 1       304/308
(98 %)
6 diff
(98.1 %id)
BF096054 uterus_tumor STAT1.b 2679 to 3208 527 to 3       525/527
(99 %)
0 diff
(100 %id)
BF096060 uterus_tumor STAT1.b 2679 to 3178 530 to 34       497/530
(93 %)
0 diff
(100 %id)
BQ378921 uterus_tumor STAT1.b 2680 to 3201 521 to 1       521/521
(100 %)
0 diff
(100 %id)
BQ378924 uterus_tumor STAT1.b 2680 to 3207 538 to 15       524/538
(97 %)
0 diff
(100 %id)
BQ378925 uterus_tumor STAT1.b 2680 to 3206 523 to 1       523/523
(100 %)
12 diff
(97.8 %id)
BF911924 uterus_tumor STAT1.b 2682 to 3147 466 to 1     Submitted on the opposite strand 466/466
(100 %)
12 diff
(97.5 %id)
BQ378919 uterus_tumor STAT1.b 2682 to 3207 521 to 2       520/532
(97 %)
0 diff
(100 %id)
BF096051 uterus_tumor STAT1.b 2686 to 3144 463 to 5       459/463
(99 %)
0 diff
(100 %id)
BF096014 uterus_tumor STAT1.b 2687 to 3201 513 to 5       509/513
(99 %)
0 diff
(100 %id)
BF096018 uterus_tumor STAT1.b 2688 to 3206 524 to 9       516/524
(98 %)
0 diff
(100 %id)
BF096021 uterus_tumor STAT1.b 2690 to 3202 513 to 1       513/513
(100 %)
16 diff
(96.9 %id)
BQ379003 uterus_tumor STAT1.b 2700 to 3207 516 to 10       507/516
(98 %)
0 diff
(100 %id)
FN144874 breast carcinoma STAT1.b 2746 to 2841 95 to 1     Submitted on the opposite strand 95/95
(100 %)
1 diff
(99.0 %id)
BQ378887 uterus_tumor STAT1.b 2755 to 3205 447 to 3       445/447
(99 %)
0 diff
(100 %id)
BQ378997 uterus_tumor STAT1.b 2758 to 3208 456 to 8       449/456
(98 %)
0 diff
(100 %id)
BQ378883 uterus_tumor STAT1.b 2766 to 3196 449 to 22       428/449
(95 %)
0 diff
(100 %id)
BQ378882 uterus_tumor STAT1.b 2776 to 3015 251 to 6       246/251
(98 %)
0 diff
(100 %id)
BQ378884 uterus_tumor STAT1.b 2776 to 3175 401 to 3       399/401
(99 %)
0 diff
(100 %id)
T12426   STAT1.b 2789 to 3069 282 to 1       282/288
(97 %)
4 diff
(98.7 %id)
BG035586 adenocarcinoma, cell line, Liver STAT1.b 2813 to 3358 1 to 546       546/546
(100 %)
0 diff
(100 %id)
CN410740 embryonic stem cells, cell lines H1, H7, andH9 STAT1.b 2815 to 3473 1 to 660       660/660
(100 %)
1 diff
(99.9 %id)
BQ378998 uterus_tumor STAT1.b 2816 to 3208 399 to 9       391/399
(97 %)
0 diff
(100 %id)
BF096036 uterus_tumor STAT1.b 2822 to 3208 383 to 1       383/383
(100 %)
21 diff
(94.6 %id)
BQ422231 melanotic melanoma, skin STAT1.b 2849 to 3650 1 to 813       813/911
(89 %)
37 diff
(96.0 %id)
DT220257 brain STAT1.b 2852 to 3423 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BG252684 adenocarcinoma, cell line, Liver STAT1.b 2890 to 3561 1 to 671       671/671
(100 %)
2 diff
(99.8 %id)
FN092666 breast carcinoma STAT1.b 2899 to 2959 60 to 1     Submitted on the opposite strand 60/61
(98 %)
1 diff
(98.4 %id)
FN084260 breast carcinoma STAT1.b 2901 to 3005 105 to 1     Submitted on the opposite strand 105/105
(100 %)
0 diff
(100 %id)
FN106978 breast carcinoma STAT1.b 2950 to 3054 102 to 1     Submitted on the opposite strand 102/105
(97 %)
3 diff
(97.2 %id)
AA486367 lung STAT1.b 2994 to 3419 1 to 426       426/426
(100 %)
0 diff
(100 %id)
FN077315 breast carcinoma STAT1.b 3022 to 3115 94 to 2     Submitted on the opposite strand 93/95
(97 %)
0 diff
(100 %id)
FN140926 breast carcinoma STAT1.b 3102 to 3215 120 to 1     Submitted on the opposite strand 120/120
(100 %)
6 diff
(95.0 %id)
BM471848 melanotic melanoma, skin STAT1.b 3103 to 4010 1 to 920   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 920/920
(100 %)
20 diff
(97.9 %id)
AW800064 uterus STAT1.b 3104 to 3247 147 to 4       144/161
(89 %)
0 diff
(100 %id)
BX414570 thymus STAT1.b 3114 to 4165 1041 to 1       1041/1064
(97 %)
14 diff
(98.7 %id)
FN138254 breast carcinoma STAT1.b 3139 to 3235 94 to 1     Submitted on the opposite strand 94/107
(87 %)
4 diff
(96.3 %id)
FN147981 breast carcinoma STAT1.b 3142 to 3251 110 to 1     Submitted on the opposite strand 110/110
(100 %)
0 diff
(100 %id)
BY796026 eye STAT1.b 3191 to 3803 1 to 613       613/613
(100 %)
0 diff
(100 %id)
TI_149311660   STAT1.b 3217 to 4193 1053 to 83   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 971/987
(98 %)
15 diff
(98.5 %id)
TI_149298731   STAT1.b 3248 to 4076 921 to 93   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 965/1004
(96 %)
7 diff
(99.4 %id)
FN064675 breast carcinoma STAT1.b 3254 to 3357 105 to 1     Submitted on the opposite strand 105/107
(98 %)
1 diff
(99.1 %id)
TI_227715158   STAT1.b 3272 to 4193 1020 to 104   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 917/976
(93 %)
25 diff
(97.5 %id)
FN060399 breast carcinoma STAT1.b 3273 to 3374 102 to 1     Submitted on the opposite strand 102/102
(100 %)
1 diff
(99.1 %id)
FN057375 breast carcinoma STAT1.b 3276 to 3376 102 to 2     Submitted on the opposite strand 101/102
(99 %)
0 diff
(100 %id)
BX098913   STAT1.b 3294 to 3976 1 to 683       683/683
(100 %)
0 diff
(100 %id)
FN139518 breast carcinoma STAT1.b 3303 to 3400 104 to 1     Submitted on the opposite strand 104/104
(100 %)
3 diff
(97.2 %id)
BM975358 lung, Primary Lung Cystic Fibrosis EpithelialCells STAT1.b 3319 to 4076 772 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 756/756
(100 %)
2 diff
(99.8 %id)
FN127811 breast carcinoma STAT1.b 3328 to 3424 94 to 1     Submitted on the opposite strand 94/94
(100 %)
3 diff
(96.9 %id)
EB385742 eye, optic nerve STAT1.b 3329 to 4076 1 to 748       748/748
(100 %)
0 diff
(100 %id)
TI_227714011   STAT1.b 3349 to 4193 936 to 103   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 834/972
(85 %)
22 diff
(97.8 %id)
FN136916 breast carcinoma STAT1.b 3366 to 3467 99 to 1     Submitted on the opposite strand 99/99
(100 %)
3 diff
(97.0 %id)
EB361689 eye, lens STAT1.b 3402 to 4063 661 to 1       661/681
(97 %)
2 diff
(99.8 %id)
BM712397 eye, lens STAT1.b 3403 to 3950 1 to 548   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 548/548
(100 %)
0 diff
(100 %id)
BU615695 cell lines, Chondrosarcoma STAT1.b 3444 to 4072 647 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 629/629
(100 %)
0 diff
(100 %id)
CB529176 Aveolar Macrophage, lung STAT1.b 3448 to 4193 765 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 747/747
(100 %)
3 diff
(99.6 %id)
CD364743 Alveolar Macrophage, lung STAT1.b 3449 to 4193 762 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 744/744
(100 %)
3 diff
(99.6 %id)
AW317081 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.b 3460 to 4010 551 to 1       551/551
(100 %)
0 diff
(100 %id)
CD657707 Embryonic Stem cells STAT1.b 3465 to 4193 753 to 26   AAA Submitted on the opposite strand 728/729
(99 %)
4 diff
(99.5 %id)
BQ189176 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STAT1.b 3480 to 4076 1 to 597   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 597/597
(100 %)
0 diff
(100 %id)
BQ189435 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STAT1.b 3480 to 4076 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
TI_151731724   STAT1.b 3480 to 4076 675 to 79   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 597/985
(60 %)
0 diff
(100 %id)
CA398016 eye, RPE/choroid STAT1.b 3494 to 4193 721 to 22   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 700/700
(100 %)
0 diff
(100 %id)
AI174915 Liver STAT1.b 3498 to 4076 579 to 1       579/582
(99 %)
2 diff
(99.7 %id)
FN087653 breast carcinoma STAT1.b 3515 to 3624 111 to 1     Submitted on the opposite strand 111/112
(99 %)
1 diff
(99.2 %id)
FN105955 breast carcinoma STAT1.b 3515 to 3624 108 to 1     Submitted on the opposite strand 108/109
(99 %)
1 diff
(99.1 %id)
FN168818 breast carcinoma STAT1.b 3520 to 3644 124 to 1     Submitted on the opposite strand 124/124
(100 %)
3 diff
(97.6 %id)
AA488075 lung STAT1.b 3550 to 4024 475 to 1       475/475
(100 %)
0 diff
(100 %id)
BM977450 lung, Primary Lung Cystic Fibrosis EpithelialCells STAT1.b 3551 to 4193 661 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 643/643
(100 %)
0 diff
(100 %id)
FN164279 breast carcinoma STAT1.b 3558 to 3659 98 to 1     Submitted on the opposite strand 98/101
(97 %)
4 diff
(96.1 %id)
CD365649 Alveolar Macrophage, lung STAT1.b 3562 to 4193 650 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 632/632
(100 %)
0 diff
(100 %id)
BF922610 nervous_tumor STAT1.b 3594 to 3754 168 to 6     Submitted on the opposite strand 163/171
(95 %)
0 diff
(100 %id)
BG993865 head_neck STAT1.b 3594 to 3751 162 to 7       156/165
(94 %)
0 diff
(100 %id)
BG993866 head_neck STAT1.b 3594 to 3755 164 to 4       161/167
(96 %)
0 diff
(100 %id)
FN053994 breast carcinoma STAT1.b 3597 to 3694 98 to 1     Submitted on the opposite strand 98/98
(100 %)
0 diff
(100 %id)
FN173365 breast carcinoma STAT1.b 3602 to 3692 89 to 1     Submitted on the opposite strand 89/92
(96 %)
2 diff
(97.9 %id)
AW388170 stomach STAT1.b 3616 to 3922 307 to 1       307/307
(100 %)
3 diff
(99.1 %id)
AW388224 stomach STAT1.b 3616 to 3922 307 to 1       307/307
(100 %)
2 diff
(99.4 %id)
AW388256 stomach STAT1.b 3616 to 3921 307 to 2       306/307
(99 %)
0 diff
(100 %id)
AW609100 stomach STAT1.b 3616 to 3821 220 to 16       205/220
(93 %)
0 diff
(100 %id)
AW810527 stomach STAT1.b 3616 to 3714 111 to 13       99/111
(89 %)
0 diff
(100 %id)
BE842389 stomach STAT1.b 3616 to 3922 307 to 1       307/307
(100 %)
0 diff
(100 %id)
FN076067 breast carcinoma STAT1.b 3631 to 3714 84 to 1     Submitted on the opposite strand 84/88
(95 %)
0 diff
(100 %id)
BQ695230 adipose STAT1.b 3633 to 4195 571 to 9   tiling clone, Submitted on the opposite strand 563/571
(98 %)
0 diff
(100 %id)
AW410848 muscle, rhabdomyosarcoma STAT1.b 3634 to 4193 578 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 560/560
(100 %)
0 diff
(100 %id)
FN047057 breast carcinoma STAT1.b 3635 to 3715 81 to 1     Submitted on the opposite strand 81/82
(98 %)
0 diff
(100 %id)
BQ752521 Prostate STAT1.b 3643 to 4076 447 to 14   AAA Submitted on the opposite strand 434/434
(100 %)
0 diff
(100 %id)
FN159775 breast carcinoma STAT1.b 3643 to 3732 89 to 1     Submitted on the opposite strand 89/89
(100 %)
3 diff
(96.7 %id)
FN065170 breast carcinoma STAT1.b 3748 to 3863 114 to 3     Submitted on the opposite strand 112/114
(98 %)
0 diff
(100 %id)
FN070593 breast carcinoma STAT1.b 3834 to 3918 80 to 1     Submitted on the opposite strand 80/80
(100 %)
4 diff
(95.0 %id)
AI752495 Bone, Hip STAT1.b 3842 to 4040 212 to 9       204/212
(96 %)
0 diff
(100 %id)
FN161468 breast carcinoma STAT1.b 3849 to 3951 102 to 1     Submitted on the opposite strand 102/104
(98 %)
8 diff
(92.4 %id)
AA082068   STAT1.b 3870 to 4193 340 to 17   AAA Submitted on the opposite strand 324/324
(100 %)
2 diff
(99.4 %id)
FN098243 breast carcinoma STAT1.b 3909 to 4022 112 to 1     Submitted on the opposite strand 112/112
(100 %)
1 diff
(99.2 %id)
BU729826 eye, Retina Foveal and Macular STAT1.b 3914 to 4164 10 to 260     Submitted on the opposite strand 251/269
(93 %)
3 diff
(98.9 %id)
BU738296 eye, lens STAT1.b 3920 to 4308 407 to 19   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 389/389
(100 %)
2 diff
(99.5 %id)
FN112006 breast carcinoma STAT1.b 3928 to 4016 86 to 1     Submitted on the opposite strand 86/86
(100 %)
3 diff
(96.6 %id)
FN127196 breast carcinoma STAT1.b 3959 to 4069 113 to 1     Submitted on the opposite strand 113/113
(100 %)
4 diff
(96.5 %id)
DB275347 uterus STAT1.c 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
AK096686   STAT1.c 13 to 2722 1 to 2710 exact tiling clone, available from FLJ,   2710/2710
(100 %)
1 diff
(100.0 %id)
DA818454   STAT1.c 14 to 568 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA726279   STAT1.c 26 to 508 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DB217537 trachea STAT1.c 26 to 600 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA557851   STAT1.c 37 to 610 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AL710333 human skeletal muscle STAT1.c 40 to 361 1 to 324       324/324
(100 %)
3 diff
(99.1 %id)
CT004753 T-Lymphocytes STAT1.c 170 to 788 1 to 620       620/627
(98 %)
6 diff
(99.1 %id)
CR985761 T-Lymphocytes STAT1.c 334 to 963 11 to 640       631/640
(98 %)
4 diff
(99.4 %id)
DB327749   STAT1.c 2145 to 2722 579 to 1       579/579
(100 %)
1 diff
(99.9 %id)
CB163366 Liver STAT1.c 2514 to 3056 1 to 540       540/540
(100 %)
1 diff
(99.9 %id)
CB984580 Pooled-Glandular STAT1.c 2611 to 3369 1 to 764   tiling clone,   764/764
(100 %)
17 diff
(97.8 %id)
BF914293 uterus_tumor STAT1.c 2749 to 3129 388 to 3     Submitted on the opposite strand 386/391
(98 %)
0 diff
(100 %id)
T29152 blood, white blood cells STAT1.c 2751 to 2906 1 to 156       156/156
(100 %)
0 diff
(100 %id)
AW949692   STAT1.c 2752 to 3315 1 to 567       567/567
(100 %)
15 diff
(97.4 %id)
AA864695 Kidney STAT1.c 2920 to 3261 1 to 342     Submitted on the opposite strand 342/342
(100 %)
0 diff
(100 %id)
DA952194 Spleen STAT1.c 2941 to 3510 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
NM_139266.2   STAT1.d 1 to 2798 1 to 2798 exact RefSeq,   2798/2798
(100 %)
0 diff
(100 %id)
BC002704 Brain, neuroblastoma STAT1.d 83 to 2693 1 to 2611 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2611/2611
(100 %)
0 diff
(100 %id)
BJ993845 hepatoblastoma STAT1.d 90 to 556 1 to 467       467/467
(100 %)
0 diff
(100 %id)
BX362857   STAT1.d 105 to 1022 1 to 918       918/921
(99 %)
4 diff
(99.6 %id)
M97936   STAT1.d 233 to 2797 41 to 2606 exact     2566/2607
(98 %)
8 diff
(99.7 %id)
AA100775 colon, tumor STAT1.d 702 to 1174 1 to 480       480/507
(94 %)
11 diff
(97.9 %id)
AU138849 placenta STAT1.d 970 to 1609 2 to 642   capped   641/644
(99 %)
5 diff
(99.3 %id)
AA076182   STAT1.d 1509 to 1872 1 to 365       365/365
(100 %)
1 diff
(99.8 %id)
AA102007 colon, tumor STAT1.d 1529 to 1933 1 to 407       407/407
(100 %)
2 diff
(99.6 %id)
BM474844 duodenal adenocarcinoma, cell line, small intestine STAT1.d 1712 to 2641 1 to 935   AAA   935/999
(93 %)
11 diff
(98.9 %id)
BM726325 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STAT1.d 1736 to 2292 1 to 557   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 557/557
(100 %)
0 diff
(100 %id)
BX362856   STAT1.d 1834 to 2768 935 to 1       935/935
(100 %)
2 diff
(99.8 %id)
TI_159692569   STAT1.d 1853 to 2693 919 to 93   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 831/1006
(82 %)
24 diff
(97.7 %id)
BF345331 anaplastic oligodendroglioma with 1p/19qloss, brain STAT1.d 1886 to 2704 1 to 817       817/820
(99 %)
26 diff
(96.9 %id)
TI_154194174   STAT1.d 2002 to 2708 50 to 758       708/1037
(68 %)
24 diff
(97.7 %id)
TI_159705199   STAT1.d 2012 to 2796 874 to 92   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 783/1017
(76 %)
60 diff
(94.2 %id)
AA748057 germinal center B cell STAT1.d 2022 to 2797 796 to 21       776/807
(96 %)
41 diff
(95.0 %id)
AW173581 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus STAT1.d 2025 to 2693 664 to 1       664/665
(99 %)
30 diff
(95.5 %id)
AW189030 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.d 2027 to 2693 667 to 1       667/667
(100 %)
19 diff
(97.2 %id)
AA927527 pooled germ cell tumors STAT1.d 2039 to 2795 774 to 23   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 752/752
(100 %)
39 diff
(94.9 %id)
CR601119 HeLa cells Cot 25-normalized STAT1.d 2044 to 2798 1 to 755   tiling clone,   755/755
(100 %)
0 diff
(100 %id)
BX400908   STAT1.d 2044 to 2798 1 to 755   fully sequenced,   755/755
(100 %)
0 diff
(100 %id)
CD368043 Alveolar Macrophage, lung STAT1.d 2064 to 2693 647 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 629/629
(100 %)
1 diff
(99.9 %id)
BI760180 pooled colon, kidney, stomach STAT1.d 2124 to 2771 1 to 653       653/707
(92 %)
13 diff
(98.2 %id)
TI_57147688   STAT1.d 2124 to 2771 28 to 680       653/1099
(59 %)
17 diff
(98.5 %id)
BQ020999 lung, Metastatic Chondrosarcoma STAT1.d 2168 to 2795 646 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 628/628
(100 %)
2 diff
(99.7 %id)
AA100723 colon, tumor STAT1.d 2177 to 2693 519 to 1       519/522
(99 %)
7 diff
(98.7 %id)
AI701979 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus STAT1.d 2177 to 2693 517 to 1       517/520
(99 %)
3 diff
(99.5 %id)
BU625955 cell lines, Enchondroma STAT1.d 2188 to 2795 626 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 608/608
(100 %)
0 diff
(100 %id)
CA443620 lung, Metastatic Chondrosarcoma STAT1.d 2217 to 2693 495 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 477/478
(99 %)
1 diff
(99.8 %id)
BX400907   STAT1.d 2231 to 2783 550 to 1   fully sequenced,   550/550
(100 %)
3 diff
(99.5 %id)
BM680932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid STAT1.d 2231 to 2693 478 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 460/460
(100 %)
0 diff
(100 %id)
BF061491 pooled STAT1.d 2234 to 2795 574 to 13   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 562/562
(100 %)
1 diff
(99.9 %id)
AA303701 aorta STAT1.d 2259 to 2572 1 to 314       314/318
(98 %)
1 diff
(99.7 %id)
BG989292 head_neck STAT1.d 2261 to 2652 11 to 405       395/406
(97 %)
31 diff
(92.4 %id)
AA076085   STAT1.d 2262 to 2692 431 to 1       431/432
(99 %)
6 diff
(98.7 %id)
AI312529 2 pooled tumors (clear cell type), Kidney STAT1.d 2264 to 2698 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AA743551 germinal center B cell STAT1.d 2285 to 2796 532 to 22   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 511/511
(100 %)
3 diff
(99.5 %id)
AA099614 colon, tumor STAT1.d 2291 to 2693 408 to 1       408/441
(92 %)
8 diff
(98.2 %id)
AI262969 Kidney STAT1.d 2303 to 2795 493 to 1       493/493
(100 %)
0 diff
(100 %id)
CA429267 Cell Line, Chondrosarcoma STAT1.d 2303 to 2795 512 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 494/494
(100 %)
1 diff
(99.8 %id)
BM855228 stomach STAT1.d 2305 to 2646 1 to 342       342/342
(100 %)
1 diff
(99.8 %id)
BM856100 stomach STAT1.d 2305 to 2693 1 to 389       389/389
(100 %)
0 diff
(100 %id)
BJ993846 hepatoblastoma STAT1.d 2307 to 2657 351 to 1       351/351
(100 %)
0 diff
(100 %id)
AU157779 placenta STAT1.d 2308 to 2693 386 to 1       386/386
(100 %)
2 diff
(99.5 %id)
AI342097 pooled germ cell tumors STAT1.d 2315 to 2795 503 to 23   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 481/481
(100 %)
3 diff
(99.4 %id)
AI932684 adenocarcinoma, Pancreas STAT1.d 2321 to 2693 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AI289890 2 pooled tumors (clear cell type), Kidney STAT1.d 2342 to 2797 459 to 4       456/459
(99 %)
0 diff
(100 %id)
AW130628 poorly differentiated adenocarcinoma withsignet ring cell features, stomach STAT1.d 2376 to 2797 427 to 6       422/427
(98 %)
0 diff
(100 %id)
BX398636 Placenta Cot 25-normalized STAT1.d 2379 to 2794 1 to 419       419/419
(100 %)
14 diff
(96.7 %id)
AI538231 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.d 2417 to 2795 389 to 11   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 379/379
(100 %)
3 diff
(99.3 %id)
AI358497 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.d 2420 to 2796 376 to 1       376/383
(98 %)
3 diff
(99.3 %id)
FN112908 breast carcinoma STAT1.d 2456 to 2556 101 to 1     Submitted on the opposite strand 101/101
(100 %)
0 diff
(100 %id)
AA506998 breast STAT1.d 2471 to 2692 221 to 1       221/221
(100 %)
2 diff
(99.1 %id)
AA862360 2 pooled tumors (clear cell type), Kidney STAT1.d 2471 to 2795 327 to 4       324/327
(99 %)
0 diff
(100 %id)
AI253770 Prostate STAT1.d 2496 to 2696 201 to 1       201/201
(100 %)
0 diff
(100 %id)
BG194383   STAT1.d 2497 to 2795 348 to 52   AAA Submitted on the opposite strand 297/297
(100 %)
4 diff
(98.7 %id)
GU211348   STAT1.e 1 to 2261 1 to 2261 exact tiling clone,   2261/2261
(100 %)
0 diff
(100 %id)
BG184932   STAT1.e 2105 to 2767 1 to 663   tiling clone,   663/694
(95 %)
25 diff
(96.4 %id)
AK225853 Kidney STAT1.f 1 to 2595 1 to 2598 E357V tiling clone,   2598/2604
(99 %)
7 diff
(99.8 %id)
DA993121 synovial membrane tissue from rheumatioidarthritis STAT1.g 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
BU175057 eye, retinoblastoma STAT1.g 11 to 854 5 to 855 L166F Q167T T176N Q178A N179E ... tiling clone,   851/866
(98 %)
30 diff
(96.6 %id)
DA113111 cerebellum STAT1.g 32 to 581 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB236495 trachea STAT1.g 33 to 461 2 to 430   capped   429/429
(100 %)
0 diff
(100 %id)
DA128065 cerebellum STAT1.g 40 to 616 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB278354 uterus STAT1.g 40 to 473 2 to 435   capped   434/434
(100 %)
0 diff
(100 %id)
DA051779   STAT1.g 57 to 534 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DA394979 thalamus STAT1.g 57 to 645 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA860457 placenta STAT1.g 57 to 610 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB019775 testis STAT1.g 57 to 603 2 to 548   capped   547/549
(99 %)
2 diff
(99.7 %id)
DB087801 testis STAT1.g 57 to 601 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB225246 trachea STAT1.g 57 to 636 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA094911 cerebellum STAT1.g 63 to 635 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA878193 Prostate STAT1.g 63 to 626 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB284055 uterus STAT1.g 68 to 603 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA125820 cerebellum STAT1.g 69 to 616 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB220250 trachea STAT1.g 69 to 632 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA110864 cerebellum STAT1.g 75 to 656 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
CR980475 T-Lymphocytes STAT1.g 201 to 831 1 to 631   tiling clone,   631/633
(99 %)
1 diff
(99.9 %id)
CR982330 T-Lymphocytes STAT1.h 1 to 860 1 to 861 exact tiling clone,   861/866
(99 %)
2 diff
(99.8 %id)
DA493146 brain STAT1.i 1 to 562 2 to 566   capped   563/566
(99 %)
6 diff
(99.0 %id)
DA499504 brain STAT1.i 2 to 573 2 to 574 A47C N48Q D49* tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DB087291 testis STAT1.j 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
2 diff
(99.7 %id)
DB056183 testis STAT1.j 3 to 556 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB084861 testis STAT1.j 4 to 574 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
BE832540 marrow STAT1.k 1 to 246 24 to 268 V7W V8* tiling clone,   253/268
(94 %)
6 diff
(97.8 %id)
AK123493 thalamus STAT1.l-u 1 to 2174 2 to 2175 exact tiling clone, available from FLJ,   2175/2175
(100 %)
2 diff
(100.0 %id)
DA375072 thalamus STAT1.l-u 1 to 562 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
BX483374   STAT1.l-u 144 to 751 8 to 615       608/615
(98 %)
8 diff
(98.7 %id)
AA812818   STAT1.l-u 677 to 994 318 to 1       318/318
(100 %)
1 diff
(99.7 %id)
BU581039 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) STAT1.l-u 1647 to 2240 10 to 610   tiling clone,   601/617
(97 %)
9 diff
(98.6 %id)
DB311107 thalamus STAT1.l-u 1660 to 2174 515 to 1       515/515
(100 %)
2 diff
(99.7 %id)
BU580583 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) STAT1.l-u 1729 to 2316 595 to 1       595/595
(100 %)
3 diff
(99.5 %id)
AA767643 germinal center B cell STAT1.l-u 1942 to 2329 395 to 1   tiling clone,   395/395
(100 %)
3 diff
(99.3 %id)
CX163718 human embryonic stem cells differentiated toan early endodermal cell type STAT1.m-u 1 to 687 21 to 707 exact tiling clone,   687/707
(97 %)
12 diff
(98.4 %id)
DB550510 hippocampus STAT1.m-u 11 to 479 471 to 1 T10X K14T R34S K35N I59H ... tiling clone,   471/471
(100 %)
12 diff
(97.5 %id)
CN342144 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 STAT1.m-u 12 to 528 1 to 517 exact     517/517
(100 %)
1 diff
(99.9 %id)
DB507228 testis STAT1.m-u 13 to 443 432 to 1 N4T S53*     432/434
(99 %)
11 diff
(97.5 %id)
DB532965 hippocampus STAT1.m-u 13 to 322 315 to 1 N4T T10N C11L S12L F13V ...     315/317
(99 %)
15 diff
(95.3 %id)
DB538399.
matches multiple genes
hippocampus STAT1.m-u 13 to 453 442 to 1 N4T   also hits gene GLS 442/444
(99 %)
1 diff
(99.8 %id)
DB539847 hippocampus STAT1.m-u 13 to 351 378 to 43 exact     336/380
(88 %)
0 diff
(100 %id)
DB542161.
matches multiple genes
hippocampus STAT1.m-u 13 to 483 471 to 1 exact   also hits gene GLS 471/473
(99 %)
0 diff
(100 %id)
DB543760.
matches multiple genes
hippocampus STAT1.m-u 13 to 462 450 to 1 exact   also hits gene GLS 450/452
(99 %)
0 diff
(100 %id)
DB545487.
matches multiple genes
hippocampus STAT1.m-u 13 to 535 525 to 3 exact   also hits gene GLS 523/527
(99 %)
0 diff
(100 %id)
DB550826.
matches multiple genes
hippocampus STAT1.m-u 13 to 530 518 to 1 exact   also hits gene GLS 518/520
(99 %)
2 diff
(99.7 %id)
BE221771 Kidney STAT1.m-u 15 to 312 298 to 1 exact     298/298
(100 %)
0 diff
(100 %id)
BP389255 pancreatic islet STAT1.m-u 33 to 382 349 to 1 exact     349/354
(98 %)
0 diff
(100 %id)
BU609134 Human Lung Epithelial cells, lung STAT1.m-u 182 to 400 236 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 219/228
(96 %)
0 diff
(100 %id)
AW750506 colon_normal STAT1.m-u 400 to 937 1 to 538   tiling clone,   538/538
(100 %)
9 diff
(98.4 %id)
BF350974 head_neck STAT1.m-u 424 to 761 1 to 343       343/343
(100 %)
6 diff
(98.3 %id)
AW577932 colon_normal STAT1.m-u 433 to 813 59 to 438       380/438
(86 %)
6 diff
(98.7 %id)
BF743973 breast STAT1.m-u 434 to 809 9 to 397       389/404
(96 %)
21 diff
(94.9 %id)
BF744260 breast STAT1.m-u 470 to 805 9 to 344       336/344
(97 %)
6 diff
(98.3 %id)
FN082372 breast carcinoma STAT1.m-u 490 to 592 1 to 102       102/103
(99 %)
3 diff
(97.1 %id)
BF745792 breast STAT1.m-u 497 to 809 1 to 317       317/324
(97 %)
9 diff
(97.3 %id)
BF745864 breast STAT1.m-u 515 to 809 47 to 342       296/349
(84 %)
17 diff
(95.2 %id)
AI859876 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.m-u 579 to 1107 529 to 1       529/529
(100 %)
0 diff
(100 %id)
AV741773 cord Blood STAT1.m-u 591 to 1109 9 to 522   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 514/522
(98 %)
6 diff
(98.9 %id)
AI768851 2 pooled tumors (clear cell type), Kidney STAT1.m-u 663 to 1112 450 to 1       450/450
(100 %)
2 diff
(99.6 %id)
AI014277 brain, pooled frontal lobe STAT1.m-u 688 to 1089 400 to 1       400/400
(100 %)
4 diff
(99.0 %id)
BE161772 head_neck STAT1.m-u 696 to 1195 11 to 507       497/507
(98 %)
6 diff
(98.9 %id)
AW878298 ovary STAT1.m-u 699 to 1263 23 to 588       566/588
(96 %)
6 diff
(99.0 %id)
DA096685 cerebellum STAT1.m-u 735 to 1296 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
AI041948 senescent fibroblast STAT1.m-u 746 to 1200 461 to 7       455/461
(98 %)
0 diff
(100 %id)
AI285616 lymph node, mantle cell lymphoma STAT1.m-u 785 to 1261 477 to 1       477/477
(100 %)
1 diff
(99.8 %id)
AI285477 lymph node, mantle cell lymphoma STAT1.m-u 801 to 1261 461 to 1   tiling clone,   461/461
(100 %)
1 diff
(99.8 %id)
AI915600 pooled STAT1.m-u 872 to 1201 346 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 330/330
(100 %)
4 diff
(98.8 %id)
BQ022370 placenta STAT1.m-u 897 to 1127 228 to 1       228/228
(100 %)
9 diff
(96.1 %id)
FN101752 breast carcinoma STAT1.m-u 1121 to 1191 1 to 73       73/73
(100 %)
1 diff
(98.7 %id)
BM150742 leukopheresis STAT1.m-u 1268 to 1750 1 to 483   tiling clone,   483/483
(100 %)
1 diff
(99.8 %id)
DA665508   STAT1.n 1 to 508 2 to 509   tiling clone, capped   508/508
(100 %)
0 diff
(100 %id)
BM152735 leukopheresis STAT1.n 421 to 897 1 to 476   tiling clone,   476/476
(100 %)
3 diff
(99.4 %id)
TI_57232250   STAT1.o-u 1 to 750 34 to 785 exact tiling clone,   752/791
(95 %)
13 diff
(98.4 %id)
BI906349 leukocyte STAT1.o-u 5 to 750 1 to 748 exact tiling clone,   748/754
(99 %)
12 diff
(98.5 %id)
BQ882455 eye, normal pigmented retinal epithelium STAT1.p 1 to 642 1 to 652 L8P Q9S Q10A L11A D12* tiling clone,   652/1092
(59 %)
26 diff
(97.7 %id)
DA415088 thalamus STAT1.q 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
AI814094 normal prostate, Prostate STAT1.r-u 1 to 490 493 to 4 H40Q tiling clone,   490/493
(99 %)
0 diff
(100 %id)
AI916762 Kidney STAT1.r-u 3 to 485 490 to 8 H30Q R33K A35S tiling clone,   483/490
(98 %)
0 diff
(100 %id)
BE011842 breast_normal STAT1.s-u 1 to 475 1 to 474 exact tiling clone,   474/474
(100 %)
17 diff
(96.5 %id)
AI885450 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.t-u 1 to 443 443 to 1 exact tiling clone,   443/443
(100 %)
0 diff
(100 %id)
AW189008 serous papillary carcinoma, high grade, 2pooled tumors, uterus STAT1.u-u 1 to 436 436 to 1 exact tiling clone,   436/436
(100 %)
0 diff
(100 %id)
FN119703 breast carcinoma STAT1.u-u 80 to 192 110 to 1     Submitted on the opposite strand 110/110
(100 %)
4 diff
(96.4 %id)
DB508702 testis STAT1.va 1 to 406 1 to 407 V15G T16Y L17S K18E I20H ... tiling clone, Submitted on the opposite strand 407/409
(99 %)
9 diff
(97.8 %id)
BE008174 breast_normal STAT1.vb-u 1 to 374 13 to 386 G38C tiling clone,   374/386
(96 %)
6 diff
(98.5 %id)
BF884543 lung_tumor STAT1.vc-u 1 to 294 15 to 305 Q2H L3C Y4I E5I L6M ... tiling clone,   291/305
(95 %)
9 diff
(97.1 %id)
FN129902 breast carcinoma STAT1.vd-u 1 to 106 1 to 103 A14S tiling clone,   103/103
(100 %)
4 diff
(96.2 %id)
FN049023 breast carcinoma STAT1.ve-u 1 to 86 1 to 86 exact tiling clone,   86/86
(100 %)
3 diff
(96.6 %id)
535 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m-u, .n, .o-u, .p, .q, .r-u, .s-u, .t-u, .u-u, .va, .vb-u, .vc-u, .vd-u, .ve-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI