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Gene TADA1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
292 supporting clones for gene TADA1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA500635 brain .a 1 to 580 2 to 583   tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
BF976915 melanotic melanoma, high MDR, skin .a 17 to 561 1 to 534       534/856
(62 %)
20 diff
(97.7 %id)
CN399642 embryonic stem cells, cell lines H1, H7, andH9 .a 39 to 592 1 to 554       554/554
(100 %)
2 diff
(99.7 %id)
NM_053053.3   .a 41 to 2285 1 to 2245 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 2245/2245
(100 %)
0 diff
(100 %id)
DA437467 tongue, tumor tissue .a 55 to 603 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AK291922   .a 101 to 1751 1 to 1651 exact tiling clone,   1651/1651
(100 %)
2 diff
(99.9 %id)
DA902940   .a 102 to 663 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA533987 brain .a 114 to 676 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB170214 kidney, tumor tissue .a 114 to 686 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
BI765183 pooled colon, kidney, stomach .a 125 to 904 1 to 824       771/1024
(75 %)
70 diff
(93.2 %id)
TI_57153081   .a 125 to 904 67 to 890       771/1090
(70 %)
56 diff
(94.9 %id)
BP341522 stomach mucosa .a 131 to 711 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA260571 caudate nucleus .a 132 to 702 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA307442 hippocampus .a 160 to 749 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
CB151635 cervix, Uterine .a 164 to 800 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
BP238484 Liver .a 165 to 751 1 to 607       607/607
(100 %)
26 diff
(95.8 %id)
CB156261 brain .a 169 to 771 10 to 612       603/603
(100 %)
0 diff
(100 %id)
BX436814 thymus .a 169 to 1066 1 to 894       894/894
(100 %)
8 diff
(99.2 %id)
BG714794 brain, hypothalamus .a 169 to 1024 1 to 855       855/856
(99 %)
19 diff
(97.8 %id)
DA696561   .a 172 to 745 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA842066 placenta .a 172 to 704 2 to 535   capped   534/534
(100 %)
3 diff
(99.5 %id)
DB034978 testis .a 172 to 733 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB488680 hypothalamus .a 174 to 633 1 to 458       458/458
(100 %)
5 diff
(99.0 %id)
DB497648 hypothalamus .a 174 to 687 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
DA149242 amygdala .a 175 to 659 2 to 487   capped   486/486
(100 %)
3 diff
(99.4 %id)
DA621746 Kidney .a 175 to 700 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA163653 amygdala .a 177 to 747 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CX872467 embryonic stem .a 178 to 948 1 to 771       771/771
(100 %)
0 diff
(100 %id)
CD687318 normal nasopharynx .a 185 to 858 26 to 699       674/699
(96 %)
1 diff
(99.9 %id)
CD693784 normal nasopharynx .a 185 to 825 23 to 662       640/662
(96 %)
2 diff
(99.7 %id)
DA349979 substantia nigra .a 193 to 735 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
AL703168 human skeletal muscle .a 193 to 935 1 to 743       743/743
(100 %)
1 diff
(99.9 %id)
DA528146 brain .a 193 to 812 2 to 621   capped   620/620
(100 %)
1 diff
(99.9 %id)
DB452021 testis .a 193 to 691 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
DB456725 testis .a 193 to 688 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
BG533691 Liver .a 193 to 785 1 to 606       604/606
(99 %)
22 diff
(96.4 %id)
DA903959   .a 193 to 764 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB127925 thymus .a 193 to 740 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB477038 hippocampus .a 194 to 676 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
BG702180 brain, hippocampus .a 194 to 1022 1 to 825       825/825
(100 %)
11 diff
(98.7 %id)
BP378606 uterus .a 194 to 743 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DA013362 adrenal gland .a 195 to 759 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA766170 tongue .a 195 to 774 2 to 581   capped   580/581
(99 %)
2 diff
(99.7 %id)
DA773893 brain .a 195 to 780 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA818170   .a 195 to 762 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA546844   .a 196 to 759 2 to 564   capped   563/565
(99 %)
2 diff
(99.7 %id)
BG718410 testis .a 196 to 886 1 to 688       688/688
(100 %)
10 diff
(98.6 %id)
DA917462 small intestine .a 196 to 755 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA933647 Spleen .a 196 to 768 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB057870 testis .a 196 to 736 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB169796 kidney, tumor tissue .a 196 to 761 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CN399641 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 197 to 811 1 to 615       615/615
(100 %)
3 diff
(99.6 %id)
AL703355 human skeletal muscle .a 198 to 602 1 to 405       405/405
(100 %)
3 diff
(99.3 %id)
DA517719 brain .a 198 to 748 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA365002 subthalamic nucleus .a 199 to 753 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA524978 brain .a 199 to 779 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA144106 amygdala .a 200 to 737 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA207602 brain .a 200 to 764 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA285596 corpus callosum .a 200 to 683 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA535705 heart .a 200 to 793 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
BF665270 brain, primitive neuroectoderm .a 200 to 847 1 to 645       645/827
(77 %)
27 diff
(96.8 %id)
BG709173 brain, hypothalamus .a 200 to 948 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
BI600954 brain, hypothalamus .a 200 to 915 1 to 724       724/750
(96 %)
22 diff
(97.1 %id)
DA715844   .a 200 to 746 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB206630 trachea .a 200 to 550 2 to 353   capped   352/352
(100 %)
2 diff
(99.5 %id)
DB457014 testis .a 201 to 390 1 to 190       190/211
(90 %)
1 diff
(99.6 %id)
DB464401 hippocampus .a 201 to 625 1 to 422       422/422
(100 %)
7 diff
(98.4 %id)
DB482348 hippocampus .a 201 to 700 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
BP372792 umbilical cord .a 201 to 764 1 to 571       571/582
(98 %)
8 diff
(98.7 %id)
Z45647 brain, total brain .a 202 to 489 1 to 288       288/288
(100 %)
3 diff
(99.0 %id)
DA753125   .a 202 to 769 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA814798   .a 202 to 738 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA981347 synovial membrane tissue from rheumatioidarthritis .a 202 to 659 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
DB121079 thymus .a 202 to 774 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB130550 thymus .a 202 to 757 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DN920245   .a 203 to 689 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
DB027166 testis .a 203 to 747 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
TI_45212641   .a 205 to 915 95 to 813       719/839
(85 %)
18 diff
(97.9 %id)
BM465890 eye, retinoblastoma .a 207 to 1081 1 to 877       877/957
(91 %)
6 diff
(99.4 %id)
DA475793   .a 208 to 784 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BM541640 leiomyosarcoma, uterus .a 208 to 1283 1 to 1081 L284C Q285R V286C H287T R288G ...     1081/1098
(98 %)
30 diff
(97.3 %id)
BQ433949 embryonal carcinoma, cell line, testis .a 208 to 1081 1 to 883       883/890
(99 %)
19 diff
(97.9 %id)
BG497960 adenocarcinoma, Prostate .a 209 to 762 1 to 578       578/806
(71 %)
40 diff
(95.1 %id)
BM802734 eye, retinoblastoma .a 209 to 1262 1 to 1055 G265R D266E T267L L268Y P269L ...     1055/1121
(94 %)
46 diff
(95.9 %id)
BE165279 head_neck .a 210 to 553 1 to 346       346/346
(100 %)
3 diff
(99.2 %id)
DA748119   .a 211 to 733 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA835929 placenta .a 211 to 752 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA953718 Spleen .a 211 to 797 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BM147458 leukopheresis .a 211 to 758 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
BM149301 leukopheresis .a 211 to 688 1 to 478       478/478
(100 %)
4 diff
(99.2 %id)
BM150091 leukopheresis .a 211 to 760 1 to 550       550/550
(100 %)
4 diff
(99.3 %id)
AV694980 hepatocellular carcinoma .a 212 to 627 1 to 408       408/412
(99 %)
28 diff
(93.3 %id)
BP237976 Liver .a 212 to 809 1 to 598       598/598
(100 %)
3 diff
(99.5 %id)
AV724434 hypothalamus .a 212 to 705 1 to 485       485/487
(99 %)
5 diff
(99.0 %id)
DN999389   .a 213 to 898 1 to 685       685/685
(100 %)
3 diff
(99.6 %id)
BM451122 eye, retinoblastoma .a 214 to 543 1 to 330       330/1385
(23 %)
8 diff
(99.5 %id)
DA969691 stomach .a 214 to 770 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB186351 liver, tumor tissue .a 214 to 781 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CN399644 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 215 to 758 1 to 544       544/544
(100 %)
0 diff
(100 %id)
BU506795 leiomyosarcoma, uterus .a 215 to 1080 1 to 868       868/875
(99 %)
4 diff
(99.6 %id)
AV760041 bone marrow .a 215 to 632 1 to 411       411/414
(99 %)
8 diff
(98.1 %id)
BC015401 Brain, glioblastoma with EGFR amplification .a 216 to 2285 1 to 2079 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 2079/2079
(100 %)
4 diff
(99.9 %id)
DA167264 amygdala .a 216 to 790 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CR619512 Neuroblastoma Cot 25-normalized .a 216 to 1886 1 to 1671 exact     1671/1671
(100 %)
0 diff
(100 %id)
BX354408 Neuroblastoma Cot 25-normalized .a 216 to 1257 1 to 1028 N211X R288X T293X H294T T295Y ...     1028/1046
(98 %)
22 diff
(97.9 %id)
BF338443 brain, glioblastoma with EGFR amplification .a 216 to 919 13 to 715       701/1008
(69 %)
11 diff
(99.0 %id)
BI916610 brain .a 216 to 1053 1 to 841       836/841
(99 %)
5 diff
(99.5 %id)
TI_57240082   .a 216 to 1053 34 to 874       836/874
(95 %)
5 diff
(99.5 %id)
DB122216 thymus .a 216 to 766 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB267265 uterus .a 216 to 738 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
CA487312   .a 217 to 1096 1 to 881       881/881
(100 %)
6 diff
(99.4 %id)
CX760794 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 217 to 934 1 to 718     Submitted on the opposite strand 718/718
(100 %)
0 diff
(100 %id)
AV647292 corresponding non cancerous liver tissue .a 219 to 571 7 to 359     Submitted on the opposite strand 353/363
(97 %)
1 diff
(99.8 %id)
F05407 brain, total brain .a 220 to 411 6 to 197       192/197
(97 %)
2 diff
(99.0 %id)
AK290964   .a 224 to 1727 1 to 1504 F62S     1504/1504
(100 %)
4 diff
(99.8 %id)
DA169404 amygdala .a 225 to 797 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA175203 amygdala .a 225 to 779 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CV023505 mixed .a 225 to 932 1 to 708       708/708
(100 %)
3 diff
(99.6 %id)
R54285 whole brain .a 225 to 656 1 to 437       437/437
(100 %)
12 diff
(97.3 %id)
R54280 whole brain .a 225 to 632 1 to 410       410/420
(97 %)
5 diff
(98.9 %id)
DA698627   .a 225 to 706 2 to 483   capped   482/482
(100 %)
0 diff
(100 %id)
DA699857   .a 225 to 754 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
TI_1948121550   .a 225 to 719 126 to 622   fully sequenced,   497/622
(79 %)
3 diff
(99.6 %id)
TI_1948121840   .a 225 to 675 124 to 574   fully sequenced,   451/574
(78 %)
1 diff
(99.9 %id)
TI_1948121987   .a 225 to 764 125 to 664   fully sequenced,   540/664
(81 %)
4 diff
(99.4 %id)
DB011812 esophageal, tumor tissue .a 225 to 790 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CN399639 embryonic stem cells, cell lines H1, H7, andH9 .a 226 to 940 1 to 715       715/715
(100 %)
3 diff
(99.6 %id)
CD656297 Embryonic Stem cells .a 227 to 1007 12 to 790       779/790
(98 %)
2 diff
(99.8 %id)
BF528015 anaplastic oligodendroglioma with 1p/19qloss, brain .a 228 to 785 1 to 555       555/555
(100 %)
3 diff
(99.5 %id)
CD643059 Embryonic Stem cells .a 228 to 1013 12 to 796       785/797
(98 %)
3 diff
(99.7 %id)
T34309 blood, white blood cells .a 228 to 517 1 to 292       292/293
(99 %)
4 diff
(98.7 %id)
T32678 heart .a 230 to 486 1 to 257       257/257
(100 %)
0 diff
(100 %id)
AL521142 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 234 to 1081 1 to 848       848/848
(100 %)
0 diff
(100 %id)
BQ686349 ductal carcinoma, cell line, Pancreas .a 237 to 1097 1 to 861       861/861
(100 %)
4 diff
(99.6 %id)
BQ692025 ductal carcinoma, cell line, Pancreas .a 237 to 1091 1 to 857       855/861
(99 %)
7 diff
(99.2 %id)
R58781   .a 314 to 743 1 to 425       425/425
(100 %)
5 diff
(98.9 %id)
BP276001 Kidney .a 326 to 861 1 to 535       535/581
(92 %)
5 diff
(99.2 %id)
DA521534 brain .a 353 to 920 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
TI_1948121690   .a 392 to 1231 961 to 124       838/1321
(63 %)
21 diff
(98.5 %id)
Z44149 brain, total brain .a 413 to 758 1 to 346       346/346
(100 %)
3 diff
(99.2 %id)
F06574 brain, total brain .a 414 to 620 1 to 207       207/207
(100 %)
2 diff
(99.1 %id)
BX281817 cervical carcinoma cell line, cervix .a 438 to 919 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
BI254679 cervical carcinoma cell line, cervix .a 438 to 1262 1 to 819       819/820
(99 %)
14 diff
(98.3 %id)
BF351298 head_neck .a 453 to 709 1 to 253       258/253
(101 %)
11 diff
(95.7 %id)
BG500917 adenocarcinoma, Prostate .a 512 to 1155 1 to 642       642/642
(100 %)
2 diff
(99.7 %id)
BG530033 embryonal carcinoma, testis .a 564 to 1160 1 to 597       597/597
(100 %)
0 diff
(100 %id)
W37854 parathyroid gland, parathyroid tumor .a 613 to 1032 1 to 431       428/448
(95 %)
22 diff
(95.1 %id)
AA223592 brain, neuroepithelial cells .a 618 to 915 1 to 298       298/348
(85 %)
4 diff
(98.9 %id)
AW380450 head_neck .a 634 to 1073 441 to 4       438/454
(96 %)
0 diff
(100 %id)
TI_1948121841   .a 645 to 1231 709 to 124   fully sequenced,   586/709
(82 %)
0 diff
(100 %id)
DA685728   .a 662 to 1183 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
H67641 liver and spleen .a 687 to 1010 1 to 326       326/326
(100 %)
5 diff
(98.5 %id)
TI_1948121551   .a 689 to 1231 667 to 123   fully sequenced,   545/667
(81 %)
0 diff
(100 %id)
BI222620 cervical carcinoma cell line, cervix .a 716 to 1442 1 to 724       724/725
(99 %)
6 diff
(99.2 %id)
W37842 parathyroid gland, parathyroid tumor .a 730 to 1034 348 to 43       306/348
(87 %)
2 diff
(99.5 %id)
TI_1948121988   .a 734 to 1231 631 to 122   fully sequenced,   510/631
(80 %)
4 diff
(99.4 %id)
BX371418 Neuroblastoma Cot 25-normalized .a 747 to 1436 693 to 1       693/844
(82 %)
16 diff
(98.2 %id)
H06694 whole brain .a 763 to 1113 9 to 361       355/364
(97 %)
4 diff
(99.0 %id)
CR618254 Neuroblastoma Cot 25-normalized .a 771 to 2222 1 to 1452       1452/1452
(100 %)
0 diff
(100 %id)
AL524128 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 771 to 1441 1 to 661   fully sequenced,   661/661
(100 %)
1 diff
(99.9 %id)
R97002 liver and spleen .a 774 to 1167 1 to 402       402/428
(93 %)
12 diff
(97.2 %id)
BG114245 Bone, osteosarcoma, cell line .a 799 to 1578 1 to 784       784/848
(92 %)
25 diff
(97.1 %id)
BY996669   .a 806 to 1476 14 to 684       671/684
(98 %)
0 diff
(100 %id)
BQ306680 breast .a 865 to 1162 1 to 300       300/300
(100 %)
6 diff
(98.0 %id)
N95138 liver and spleen .a 874 to 1304 9 to 446       438/492
(89 %)
16 diff
(96.8 %id)
BF887566 testis_normal .a 889 to 1240 356 to 6     Submitted on the opposite strand 351/356
(98 %)
1 diff
(99.8 %id)
AA172321   .a 891 to 1298 1 to 407       407/409
(99 %)
2 diff
(99.6 %id)
CB215701 normal endometrium, late proliferativephase, cycle day 13, uterus .a 921 to 1542 1 to 622       622/622
(100 %)
0 diff
(100 %id)
BE165298 head_neck .a 931 to 1057 127 to 1     Submitted on the opposite strand 127/127
(100 %)
0 diff
(100 %id)
AV695196 hepatocellular carcinoma .a 952 to 1701 1 to 741       741/741
(100 %)
9 diff
(98.8 %id)
CN399643 embryonic stem cells, DMSO-treated H9 cellline .a 981 to 1693 9 to 721       713/721
(98 %)
0 diff
(100 %id)
EC571798 Prostate .a 1047 to 1142 1 to 97       97/97
(100 %)
1 diff
(99.0 %id)
ES315991 melanoma cell line .a 1055 to 1367 35 to 348       314/386
(81 %)
3 diff
(99.3 %id)
BX436813 thymus .a 1232 to 2246 1026 to 14       1013/1026
(98 %)
0 diff
(100 %id)
AL521141 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1369 to 2254 886 to 1       886/886
(100 %)
3 diff
(99.7 %id)
N66024 liver and spleen .a 1384 to 1845 464 to 1       464/465
(99 %)
2 diff
(99.6 %id)
AL562316 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1411 to 2222 806 to 1   fully sequenced,   806/806
(100 %)
2 diff
(99.8 %id)
H67104 liver and spleen .a 1499 to 1845 350 to 1       350/352
(99 %)
3 diff
(99.2 %id)
DB323631   .a 1754 to 2285 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
AA172168   .a 1869 to 2285 418 to 1   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
R51892 whole brain .a 1909 to 2289 392 to 4       389/392
(99 %)
0 diff
(100 %id)
Z40141 brain, total brain .a 2087 to 2285 199 to 1       199/199
(100 %)
0 diff
(100 %id)
F02843 brain, total brain .a 2135 to 2285 151 to 1       151/153
(98 %)
0 diff
(100 %id)
DA065253 cerebellum .b 1 to 558 5 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BG715188 brain, hypothalamus .b 8 to 798 1 to 795   tiling clone,   795/795
(100 %)
10 diff
(98.8 %id)
BI596816 brain, hypothalamus .b 14 to 806 7 to 807 P102Q H105Q P108L D109M D110M ... tiling clone,   801/943
(84 %)
18 diff
(98.1 %id)
TI_45209153   .b 14 to 806 97 to 897 P102Q H105Q P108L D109M D110M ...     801/1033
(77 %)
18 diff
(98.3 %id)
DB484199 hypothalamus .b 15 to 454 1 to 440       440/440
(100 %)
3 diff
(99.4 %id)
DB489322 hypothalamus .b 15 to 475 1 to 461       461/461
(100 %)
3 diff
(99.4 %id)
DB496600 hypothalamus .b 15 to 512 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
DB501081 hypothalamus .b 15 to 508 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
DB486614 hypothalamus .b 17 to 436 1 to 419       419/419
(100 %)
9 diff
(97.9 %id)
H71370 liver and spleen .c 1 to 521 1 to 537   tiling clone,   537/540
(99 %)
35 diff
(93.6 %id)
H71324 liver and spleen .c 881 to 1204 327 to 1   tiling clone,   327/328
(99 %)
5 diff
(98.5 %id)
AK309250 thalamus .d 1 to 1490 1 to 1490 exact tiling clone,   1490/1490
(100 %)
11 diff
(99.3 %id)
DA416214 thalamus .d 2 to 537 2 to 537 exact capped   536/536
(100 %)
0 diff
(100 %id)
DB447334 testis .d 29 to 463 1 to 436 exact     436/436
(100 %)
1 diff
(99.8 %id)
DB458681 testis .d 29 to 501 1 to 473 exact     473/473
(100 %)
1 diff
(99.8 %id)
GD138664   .d 431 to 494 1 to 64       64/72
(88 %)
2 diff
(97.3 %id)
AI374594   .d 881 to 1154 23 to 296     Submitted on the opposite strand 274/296
(92 %)
0 diff
(100 %id)
DA830274 placenta .d 939 to 1682 2 to 749   tiling clone, capped   748/839
(89 %)
22 diff
(97.4 %id)
BC036497 Brain, hippocampus .d 987 to 3524 1 to 2538   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 2538/2538
(100 %)
7 diff
(99.8 %id)
BI550472 brain, hippocampus .d 987 to 1589 1 to 608   available from MGC,   608/608
(100 %)
12 diff
(98.1 %id)
TI_44169959   .d 990 to 1589 86 to 690       605/690
(87 %)
0 diff
(100 %id)
DB068802 testis .d 1609 to 2134 2 to 531   capped   530/533
(99 %)
4 diff
(99.3 %id)
DA950157 Spleen .d 1621 to 2186 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DB375372 placenta .d 3102 to 3522 424 to 4   tiling clone,   421/424
(99 %)
0 diff
(100 %id)
AK310391 testis .e 1 to 1076 2 to 1076 exact tiling clone,   1076/1076
(100 %)
3 diff
(99.8 %id)
AW806824 stomach .e 789 to 1313 13 to 537   tiling clone,   525/537
(97 %)
0 diff
(100 %id)
BY994669   .e 909 to 1530 9 to 627   tiling clone,   619/627
(98 %)
4 diff
(99.4 %id)
DA630332 Kidney .f 1 to 575 2 to 576 R38C tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
R24487 placenta .g-u 1 to 318 1 to 326   tiling clone,   326/379
(86 %)
13 diff
(96.6 %id)
CN399645 embryonic stem cells, cell lines H1, H7, andH9 .g-u 38 to 406 1 to 369 exact tiling clone,   369/369
(100 %)
3 diff
(99.2 %id)
CD684734 normal nasopharynx .g-u 122 to 707 33 to 618 exact tiling clone,   586/618
(94 %)
0 diff
(100 %id)
CB853325 Human Lung Epithelial cells, lung .g-u 128 to 354 11 to 237 K18E   Submitted on the opposite strand 227/237
(95 %)
0 diff
(100 %id)
BX333051 Neuroblastoma Cot 25-normalized .g-u 194 to 1295 1097 to 13       1085/1097
(98 %)
0 diff
(100 %id)
BF670146 brain, primitive neuroectoderm .g-u 195 to 960 1 to 761       761/870
(87 %)
39 diff
(95.6 %id)
BM014164 breast, mammary adenocarcinoma, cell line .g-u 231 to 878 1 to 636       636/636
(100 %)
21 diff
(96.7 %id)
TI_59392144   .g-u 236 to 878 114 to 744       631/637
(99 %)
18 diff
(97.2 %id)
BF574966 muscle (skeletal) .g-u 244 to 946 1 to 700       700/820
(85 %)
30 diff
(96.4 %id)
FN075787 breast carcinoma .g-u 279 to 394 1 to 116       116/116
(100 %)
0 diff
(100 %id)
BG496113 lung, mucoepidermoid carcinoma .g-u 317 to 785 1 to 475       475/846
(56 %)
12 diff
(98.6 %id)
TI_149287211   .g-u 334 to 1330 1063 to 80   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 984/1133
(86 %)
24 diff
(97.9 %id)
AV692112 hepatocellular carcinoma .g-u 348 to 681 16 to 346       331/347
(95 %)
5 diff
(98.6 %id)
EC539168 Prostate .g-u 394 to 492 1 to 96       96/96
(100 %)
4 diff
(95.9 %id)
BX392871 Placenta Cot 25-normalized .g-u 409 to 1325 916 to 1       916/917
(99 %)
6 diff
(99.4 %id)
AV689975 hepatocellular carcinoma .g-u 416 to 964 1 to 549       549/687
(79 %)
25 diff
(96.4 %id)
BP227221   .g-u 418 to 998 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BE927649 colon .g-u 420 to 626 219 to 14       206/219
(94 %)
0 diff
(100 %id)
BX329570 Neuroblastoma Cot 25-normalized .g-u 422 to 1295 881 to 14       868/882
(98 %)
0 diff
(100 %id)
R95925 liver and spleen .g-u 480 to 867 396 to 1       396/397
(99 %)
12 diff
(97.0 %id)
BX353776 Neuroblastoma Cot 25-normalized .g-u 493 to 1246 855 to 1       855/964
(88 %)
61 diff
(93.7 %id)
BU581752 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .g-u 498 to 1001 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
BF931446 nervous_tumor .g-u 499 to 824 326 to 1     Submitted on the opposite strand 326/326
(100 %)
0 diff
(100 %id)
AV724565 hypothalamus .g-u 509 to 897 1 to 389       389/394
(98 %)
1 diff
(99.8 %id)
AV723814 hypothalamus .g-u 514 to 1197 1 to 675       675/691
(97 %)
60 diff
(91.4 %id)
AA131998 uterus .g-u 582 to 940 1 to 362   fully sequenced,   362/362
(100 %)
2 diff
(99.5 %id)
BX090015 uterus .g-u 583 to 1241 1 to 659       659/659
(100 %)
0 diff
(100 %id)
AA115333 uterus .g-u 583 to 1115 1 to 520   fully sequenced,   520/520
(100 %)
6 diff
(98.9 %id)
AA151270 uterus .g-u 583 to 913 1 to 336   fully sequenced,   336/336
(100 %)
1 diff
(99.8 %id)
H13107 placenta .g-u 593 to 965 1 to 378       378/395
(95 %)
11 diff
(97.3 %id)
BM972495 lung .g-u 599 to 1330 747 to 17   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 731/731
(100 %)
4 diff
(99.5 %id)
BF931447 nervous_tumor .g-u 618 to 831 214 to 1     Submitted on the opposite strand 214/215
(99 %)
17 diff
(92.1 %id)
AI907541 breast .g-u 620 to 1200 580 to 2       579/591
(97 %)
0 diff
(100 %id)
D79743 aorta .g-u 650 to 924 1 to 271       271/272
(99 %)
6 diff
(97.8 %id)
BQ007595 Chondrosarcoma, Left Pubic Bone .g-u 707 to 1330 640 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 624/624
(100 %)
0 diff
(100 %id)
BE002303 breast_normal .g-u 751 to 1198 469 to 21     Submitted on the opposite strand 449/489
(91 %)
0 diff
(100 %id)
FN074571 breast carcinoma .g-u 751 to 854 1 to 104       104/104
(100 %)
0 diff
(100 %id)
AI760812 2 pooled tumors (clear cell type), Kidney .g-u 766 to 1329 568 to 5       564/568
(99 %)
0 diff
(100 %id)
AI633691 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 781 to 1330 550 to 1       550/550
(100 %)
1 diff
(99.9 %id)
AI743976 Kidney .g-u 804 to 1321 527 to 10       518/527
(98 %)
0 diff
(100 %id)
AW006271 pooled germ cell tumors .g-u 805 to 1330 526 to 1       526/526
(100 %)
0 diff
(100 %id)
BE549523 carcinoid, lung .g-u 814 to 1325 517 to 7       511/517
(98 %)
0 diff
(100 %id)
AI700393 colon .g-u 830 to 1323 503 to 10       494/503
(98 %)
0 diff
(100 %id)
AI570769 adenocarcinoma, Pancreas .g-u 836 to 1131 295 to 1       295/295
(100 %)
1 diff
(99.7 %id)
DB568749 hypothalamus .g-u 837 to 1330 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
DB551209 hippocampus .g-u 847 to 1330 1 to 484     Submitted on the opposite strand 484/484
(100 %)
2 diff
(99.6 %id)
AI378849 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 848 to 1331 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AI768614 Kidney .g-u 848 to 1330 483 to 1       483/483
(100 %)
1 diff
(99.8 %id)
BF448307 carcinoid, lung .g-u 848 to 1334 488 to 2   tiling clone,   487/488
(99 %)
0 diff
(100 %id)
DB522153 testis .g-u 849 to 1330 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
DB572262 hypothalamus .g-u 852 to 1330 1 to 479     Submitted on the opposite strand 479/479
(100 %)
1 diff
(99.8 %id)
DB567624 hypothalamus .g-u 858 to 1330 1 to 473     Submitted on the opposite strand 473/473
(100 %)
1 diff
(99.8 %id)
DB522451 testis .g-u 864 to 1328 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
DN920244   .g-u 875 to 1327 454 to 2       453/454
(99 %)
0 diff
(100 %id)
DB517550 testis .g-u 876 to 1330 1 to 455     Submitted on the opposite strand 455/455
(100 %)
2 diff
(99.6 %id)
DB524180 testis .g-u 876 to 1328 1 to 453     Submitted on the opposite strand 453/453
(100 %)
1 diff
(99.8 %id)
AI129857 uterus .g-u 879 to 1329 454 to 5       450/454
(99 %)
0 diff
(100 %id)
DB555628 hypothalamus .g-u 882 to 1330 1 to 455     Submitted on the opposite strand 455/455
(100 %)
18 diff
(96.1 %id)
AA151271 uterus .g-u 883 to 1333 461 to 1   fully sequenced,   461/461
(100 %)
7 diff
(98.5 %id)
BU581436 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .g-u 884 to 1334 461 to 12       450/461
(97 %)
0 diff
(100 %id)
DB553159 hypothalamus .g-u 888 to 1330 1 to 441     Submitted on the opposite strand 441/441
(100 %)
4 diff
(99.1 %id)
DB558753 hypothalamus .g-u 893 to 1330 1 to 438     Submitted on the opposite strand 438/438
(100 %)
3 diff
(99.4 %id)
DB558029 hypothalamus .g-u 895 to 1330 1 to 437     Submitted on the opposite strand 437/437
(100 %)
4 diff
(99.1 %id)
DB530621 hippocampus .g-u 901 to 1330 1 to 427     Submitted on the opposite strand 427/427
(100 %)
8 diff
(98.2 %id)
DB560574 hypothalamus .g-u 902 to 1330 1 to 430     Submitted on the opposite strand 430/430
(100 %)
7 diff
(98.4 %id)
DB548434 hippocampus .g-u 909 to 1329 1 to 421     Submitted on the opposite strand 421/422
(99 %)
1 diff
(99.8 %id)
AA131832 uterus .g-u 910 to 1333 425 to 1   fully sequenced,   425/425
(100 %)
3 diff
(99.3 %id)
AI091145 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 910 to 1330 421 to 1       421/421
(100 %)
0 diff
(100 %id)
BM830496 stomach .g-u 918 to 1186 1 to 269       269/269
(100 %)
0 diff
(100 %id)
AI269749 pooled .g-u 923 to 1334 416 to 5       412/416
(99 %)
0 diff
(100 %id)
AI300863 2 pooled tumors (clear cell type), Kidney .g-u 956 to 1334 379 to 1       379/379
(100 %)
3 diff
(99.3 %id)
AI382722 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 957 to 1334 394 to 5       390/466
(83 %)
0 diff
(100 %id)
AI867173 Kidney .g-u 961 to 1330 381 to 12   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 370/370
(100 %)
1 diff
(99.8 %id)
AI286118 pooled .g-u 975 to 1331 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
CN399646 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g-u 1000 to 1328 1 to 329   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 329/329
(100 %)
1 diff
(99.7 %id)
T16792   .g-u 1011 to 1330 324 to 1       324/324
(100 %)
5 diff
(98.5 %id)
AA582838 germ cell tumor .g-u 1012 to 1330 363 to 45   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 319/319
(100 %)
1 diff
(99.7 %id)
BE348480 carcinoid, lung .g-u 1031 to 1325 300 to 7       294/300
(98 %)
0 diff
(100 %id)
AI620275 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .g-u 1042 to 1330 289 to 1       289/289
(100 %)
0 diff
(100 %id)
BE827609 lung_tumor .g-u 1045 to 1321 1 to 277       277/277
(100 %)
14 diff
(95.0 %id)
AI638273 pooled germ cell tumors .g-u 1045 to 1331 287 to 1       287/287
(100 %)
0 diff
(100 %id)
R23855 placenta .g-u 1061 to 1330 1 to 270   AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) 270/270
(100 %)
0 diff
(100 %id)
AI241920 brain, tumor, 5 pooled (see description) .g-u 1069 to 1331 265 to 1       265/265
(100 %)
3 diff
(98.9 %id)
H13108 placenta .g-u 1084 to 1324 242 to 1       242/246
(98 %)
2 diff
(99.2 %id)
AA115245 uterus .g-u 1085 to 1333 266 to 1   fully sequenced,   266/266
(100 %)
7 diff
(97.4 %id)
FN120368 breast carcinoma .g-u 1089 to 1203 113 to 1     Submitted on the opposite strand 113/113
(100 %)
4 diff
(96.5 %id)
BE139490 serous papillary carcinoma, high grade, 2pooled tumors, uterus .g-u 1106 to 1330 225 to 1       225/225
(100 %)
1 diff
(99.6 %id)
DB512300 testis .g-u 1110 to 1328 1 to 218     Submitted on the opposite strand 218/218
(100 %)
13 diff
(94.1 %id)
FN143798 breast carcinoma .g-u 1147 to 1254 1 to 108       108/108
(100 %)
2 diff
(98.2 %id)
FN169337 breast carcinoma .g-u 1178 to 1278 98 to 1     Submitted on the opposite strand 98/98
(100 %)
3 diff
(97.0 %id)
BM144580 leukopheresis .g-u 1189 to 1334 157 to 12       146/157
(92 %)
0 diff
(100 %id)
C05965   .h-u -10 to 276 8 to 294 I7X Y8X F9X C10X L11X ... tiling clone,   287/294
(97 %)
0 diff
(100 %id)
AV694072 hepatocellular carcinoma Gene TADA1, variant not shown         Suspected internal deletion, this clone was ignored    
AV704651 adrenal gland Gene TADA1, variant not shown         Suspected internal deletion, this clone was ignored    
BG993694 head_neck Gene TADA1, variant not shown              
CN399640 embryonic stem cells, cell lines H1, H7, andH9 Gene TADA1, variant not shown              
AI200985   Gene TADA1, variant not shown       AAA Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base)    
BG699262 brain, hippocampus Gene TADA1, variant not shown         This clone was ignored    
DB070361.
matches multiple genes
testis Gene TADA1, variant not shown       capped This clone was ignored, also hits gene bleerorbo    
DB070361.
matches multiple genes
testis Gene bleerorbo, variant not shown       capped This clone was ignored, also hits gene bleerorbo    
DB340116.
matches multiple genes
testis Gene TADA1, variant not shown         This clone was ignored, also hits gene bleerorbo    
DB340116.
matches multiple genes
testis Gene bleerorbo, variant not shown         This clone was ignored, also hits gene bleerorbo    
DB229209 trachea Gene TADA1, variant not shown       capped      
DB349901 trachea Gene TADA1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI