To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SPP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
37 supporting clones for gene SPP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BJ996688 hepatoblastoma .a 1 to 826 1 to 411 M10R M11* tiling clone, to resequence, Suspected internal deletion 411/411
(100 %)
0 diff
(100 %id)
BJ996689 hepatoblastoma .a 1127 to 1618 492 to 1   tiling clone, to resequence, Suspected internal deletion 492/492
(100 %)
1 diff
(99.8 %id)
BX496642 Liver .b 1 to 461 1 to 461   tiling clone,   461/463
(99 %)
4 diff
(99.2 %id)
AJ308099 Liver .b 3 to 1021 1 to 1019 exact     1019/1019
(100 %)
0 diff
(100 %id)
NM_006944.2   .b 3 to 1021 1 to 1019 exact RefSeq,   1019/1019
(100 %)
0 diff
(100 %id)
BC069401 PCR rescued clones .b 88 to 723 1 to 636 exact available from MGC,   636/636
(100 %)
1 diff
(99.9 %id)
BC106705 PCR rescued clones .b 88 to 720 1 to 633       633/633
(100 %)
1 diff
(99.9 %id)
BC112438 PCR rescued clones .b 88 to 720 1 to 633       633/633
(100 %)
0 diff
(100 %id)
U20530   .b 88 to 723 1 to 636 exact     636/636
(100 %)
1 diff
(99.9 %id)
CR607621 fetal liver .b 217 to 1023 1 to 807   tiling clone,   807/807
(100 %)
0 diff
(100 %id)
BX405937 fetal liver, Liver .b 217 to 1023 1 to 807   fully sequenced,   807/807
(100 %)
0 diff
(100 %id)
H59179 liver and spleen .b 241 to 531 13 to 304       292/319
(91 %)
9 diff
(97.2 %id)
AI132948 Liver .b 371 to 1011 646 to 1       646/648
(99 %)
11 diff
(98.4 %id)
BE971485 muscle (skeletal) .b 382 to 882 1 to 503       503/504
(99 %)
14 diff
(97.3 %id)
T74678 Liver .b 402 to 717 1 to 320       320/334
(95 %)
10 diff
(97.1 %id)
AI221684 pooled .b 433 to 1021 589 to 1       589/589
(100 %)
7 diff
(98.9 %id)
R29227   .b 481 to 688 1 to 208       208/208
(100 %)
0 diff
(100 %id)
AA054823   .b 481 to 723 1 to 244       244/245
(99 %)
6 diff
(97.6 %id)
AW340137 pooled .b 562 to 1023 462 to 1       462/462
(100 %)
2 diff
(99.6 %id)
BX097970 liver and spleen .b 574 to 1021 1 to 448   AAA   448/448
(100 %)
0 diff
(100 %id)
T74619 Liver .b 586 to 997 413 to 1       413/414
(99 %)
16 diff
(96.2 %id)
T84575 liver and spleen .b 596 to 961 1 to 376       376/395
(95 %)
20 diff
(95.0 %id)
BX405936 fetal liver, Liver .b 607 to 1009 402 to 1   fully sequenced,   402/402
(100 %)
5 diff
(98.8 %id)
H59135 liver and spleen .b 614 to 1018 414 to 5       410/416
(98 %)
5 diff
(98.8 %id)
AW119013 pooled .b 623 to 1023 402 to 2       401/402
(99 %)
0 diff
(100 %id)
AI005085 pooled .b 628 to 1023 397 to 2       396/397
(99 %)
0 diff
(100 %id)
T64742 Liver .b 638 to 1016 1 to 389       389/399
(97 %)
11 diff
(97.3 %id)
N54053 liver and spleen .b 761 to 1021 260 to 1       260/260
(100 %)
2 diff
(99.3 %id)
BC113972 PCR rescued clones .c 1 to 508 1 to 508   tiling clone,   508/508
(100 %)
0 diff
(100 %id)
AV681865 hepatocellular carcinoma .c 442 to 627 1 to 186   tiling clone, AAA   186/186
(100 %)
0 diff
(100 %id)
AI032584 liver and spleen .d-u 1 to 373 377 to 6   tiling clone,   372/377
(98 %)
0 diff
(100 %id)
CB163851 Liver .d-u 220 to 830 1 to 611   tiling clone,   611/611
(100 %)
3 diff
(99.6 %id)
CB164241 Liver .d-u 220 to 833 1 to 614       614/614
(100 %)
3 diff
(99.6 %id)
AV656125 corresponding non cancerous liver tissue .d-u 432 to 828 1 to 397   tiling clone, Submitted on the opposite strand 397/397
(100 %)
3 diff
(99.3 %id)
W03162 liver and spleen .d-u 803 to 1256 1 to 467   fully sequenced,   467/467
(100 %)
8 diff
(98.3 %id)
W02667 liver and spleen .d-u 804 to 1191 1 to 394   tiling clone,   394/435
(90 %)
8 diff
(98.2 %id)
H89806 liver and spleen .d-u 942 to 1338 1 to 402   tiling clone,   402/450
(89 %)
12 diff
(97.4 %id)
AV718912.
matches multiple genes
corresponding non cancerous liver tissue .d-u 1105 to 1690 586 to 1 exact tiling clone, Submitted on the opposite strand, submitted on the opposite strand, also hits gene FAM35A 586/586
(100 %)
0 diff
(100 %id)
N74450 liver and spleen .d-u 1226 to 1693 467 to 1   tiling clone, fully sequenced,   467/467
(100 %)
3 diff
(99.4 %id)
H89744 liver and spleen .d-u 1399 to 1669 275 to 1       275/427
(64 %)
4 diff
(99.1 %id)
AV645964 corresponding non cancerous liver tissue .e 1 to 381 1 to 382 exact tiling clone, Submitted on the opposite strand 382/382
(100 %)
1 diff
(99.8 %id)
BJ996230.
matches multiple genes
hepatoblastoma Gene SPP2, variant not shown         This clone was ignored, also hits gene steedorbu    
BJ996230.
matches multiple genes
hepatoblastoma Gene steedorbu, variant not shown         This clone was ignored, also hits gene steedorbu    
BJ996231.
matches multiple genes
hepatoblastoma Gene SPP2, variant not shown         This clone was ignored, also hits gene steedorbu    
BJ996231.
matches multiple genes
hepatoblastoma Gene steedorbu, variant not shown         This clone was ignored, also hits gene steedorbu    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C