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Gene SPIRE2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
107 supporting clones for gene SPIRE2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX439688 placenta SPIRE2.a 1 to 854 1 to 854   tiling clone,   854/854
(100 %)
10 diff
(98.9 %id)
BI913589 brain SPIRE2.a 1 to 721 1 to 726       726/726
(100 %)
13 diff
(98.3 %id)
TI_57241484   SPIRE2.a 1 to 786 31 to 827       797/905
(88 %)
29 diff
(96.8 %id)
NM_032451.1   SPIRE2.a 1 to 3249 1 to 3249 exact RefSeq,   3249/3249
(100 %)
5 diff
(99.9 %id)
AJ422077   SPIRE2.a 10 to 2197 1 to 2187   tiling clone,   2187/2187
(100 %)
4 diff
(99.9 %id)
DR000159 fetal brain SPIRE2.a 189 to 675 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
AL834408 brain SPIRE2.a 207 to 3244 1 to 3039   tiling clone, available from DKFZ, AAA   3039/3039
(100 %)
2 diff
(100.0 %id)
BX431410 placenta SPIRE2.a 567 to 1499 1 to 922       922/923
(99 %)
17 diff
(98.2 %id)
BE885160 leiomyosarcoma, uterus SPIRE2.a 651 to 1331 1 to 672       674/706
(95 %)
20 diff
(97.2 %id)
BM546994 brain, hippocampus SPIRE2.a 859 to 1331 474 to 4   available from MGC, Submitted on the opposite strand 475/1197
(39 %)
0 diff
(100 %id)
BI159862 epithelioid carcinoma cell line, Pancreas SPIRE2.a 863 to 1358 1 to 502       502/585
(85 %)
13 diff
(97.8 %id)
BI160922 epithelioid carcinoma cell line, Pancreas SPIRE2.a 863 to 1605 1 to 748       748/748
(100 %)
23 diff
(97.0 %id)
BM557869 astrocytoma grade IV, cell line, brain SPIRE2.a 869 to 1679 1 to 815       815/1029
(79 %)
11 diff
(99.0 %id)
BG978176 colon_ins SPIRE2.a 876 to 1095 227 to 4       224/232
(96 %)
10 diff
(95.7 %id)
AA064599 Pancreas SPIRE2.a 952 to 1099 1 to 149       149/149
(100 %)
3 diff
(98.0 %id)
AL534016 brain, fetal brain SPIRE2.a 1099 to 1857 10 to 767   fully sequenced,   758/767
(98 %)
8 diff
(99.0 %id)
CV811020 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass SPIRE2.a 1116 to 1832 28 to 747       720/929
(77 %)
28 diff
(97.0 %id)
AK094918 corpus callosum SPIRE2.a 1184 to 3244 1 to 2055   tiling clone, available from FLJ,   2055/2055
(100 %)
6 diff
(99.8 %id)
DA280555 corpus callosum SPIRE2.a 1185 to 1779 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
AL541809 placenta SPIRE2.a 1190 to 2208 1 to 1013   fully sequenced,   1013/1013
(100 %)
11 diff
(99.0 %id)
AA984796 schizophrenic brain S-11 frontal lobe SPIRE2.a 1293 to 1561 1 to 268     Submitted on the opposite strand 268/268
(100 %)
3 diff
(98.9 %id)
BC063706 Skin, normal SPIRE2.a 1388 to 2330 1 to 943   available from MGC, AAA   943/943
(100 %)
0 diff
(100 %id)
BG697287 skin SPIRE2.a 1388 to 1970 1 to 582   available from MGC,   582/583
(99 %)
4 diff
(99.4 %id)
BF988903 placenta_normal SPIRE2.a 1476 to 1750 1 to 275       275/275
(100 %)
0 diff
(100 %id)
CB306850 Human Lung Epithelial cells, lung SPIRE2.a 1628 to 2322 713 to 19   AAA   695/695
(100 %)
3 diff
(99.6 %id)
BF987176 placenta_normal SPIRE2.a 1647 to 2045 14 to 414       401/414
(96 %)
8 diff
(98.1 %id)
BE075855 breast SPIRE2.a 1660 to 1889 12 to 242       231/242
(95 %)
6 diff
(97.6 %id)
R06205 liver and spleen SPIRE2.a 1677 to 1981 1 to 311       311/377
(82 %)
10 diff
(97.4 %id)
AW843641 colon_normal SPIRE2.a 1684 to 1935 253 to 2       252/256
(98 %)
1 diff
(99.7 %id)
BI005758 head_normal SPIRE2.a 1695 to 2160 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
F12962 brain, total brain SPIRE2.a 1725 to 2035 1 to 311       311/311
(100 %)
1 diff
(99.7 %id)
AI215798 carcinoid, lung SPIRE2.a 1764 to 2312 551 to 3       547/557
(98 %)
14 diff
(97.5 %id)
AW294165   SPIRE2.a 1792 to 2311 535 to 16   AAA   520/520
(100 %)
0 diff
(100 %id)
AL534015 brain, fetal brain SPIRE2.a 1800 to 2265 486 to 21   fully sequenced,   466/486
(95 %)
0 diff
(100 %id)
TI_157602708   SPIRE2.a 1823 to 2308 617 to 132       486/618
(78 %)
0 diff
(100 %id)
BX454781 brain, fetal brain SPIRE2.a 1829 to 2331 506 to 5       502/506
(99 %)
13 diff
(97.5 %id)
T75274 whole brain SPIRE2.a 1829 to 2233 79 to 492       414/494
(83 %)
26 diff
(94.8 %id)
AI808096 pooled SPIRE2.a 1838 to 2306 467 to 1       467/467
(100 %)
10 diff
(97.9 %id)
BF529689 anaplastic oligodendroglioma with 1p/19qloss, brain SPIRE2.a 1888 to 2661 1 to 777       777/965
(80 %)
26 diff
(97.4 %id)
BI009520 kidney_tumor SPIRE2.a 1927 to 2179 1 to 250       250/286
(87 %)
7 diff
(97.6 %id)
BQ326246 colon_normal SPIRE2.a 1950 to 2161 15 to 224       210/239
(87 %)
8 diff
(96.7 %id)
BF528380 anaplastic oligodendroglioma with 1p/19qloss, brain SPIRE2.a 1972 to 2673 89 to 809       721/841
(85 %)
6 diff
(99.3 %id)
AW449835   SPIRE2.a 1984 to 2309 341 to 16   AAA   326/333
(97 %)
2 diff
(99.4 %id)
CN299763 embryonic stem cells, DMSO-treated H9 cellline SPIRE2.a 1994 to 2523 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
AW449052   SPIRE2.a 1994 to 2311 333 to 16   AAA   318/318
(100 %)
1 diff
(99.7 %id)
AA633456 breast SPIRE2.a 2015 to 2331 320 to 4       317/320
(99 %)
0 diff
(100 %id)
AI885688 anaplastic oligodendroglioma, brain SPIRE2.a 2020 to 2310 291 to 1       291/291
(100 %)
0 diff
(100 %id)
BX327364 Placenta Cot 25-normalized SPIRE2.a 2079 to 2308 1 to 236       236/240
(98 %)
8 diff
(96.7 %id)
AA064600 Pancreas SPIRE2.a 2099 to 2305 207 to 1       207/212
(97 %)
3 diff
(98.6 %id)
R06103 liver and spleen SPIRE2.a 2127 to 2300 174 to 1       174/174
(100 %)
1 diff
(99.5 %id)
AL569109 placenta SPIRE2.a 2178 to 3209 1023 to 1   fully sequenced,   1023/1023
(100 %)
20 diff
(98.1 %id)
BU955386 mixed (pool of 40 RNAs) SPIRE2.a 2383 to 2949 1 to 569       569/820
(69 %)
9 diff
(99.0 %id)
BQ084433 stomach SPIRE2.a 2463 to 2818 1 to 356       356/356
(100 %)
0 diff
(100 %id)
BQ083696 stomach SPIRE2.a 2464 to 2902 1 to 438       438/438
(100 %)
1 diff
(99.8 %id)
AA345427 gall bladder SPIRE2.a 2522 to 2791 1 to 270       270/270
(100 %)
0 diff
(100 %id)
BF945347 nervous_normal SPIRE2.a 2568 to 2894 329 to 5     Submitted on the opposite strand 325/329
(98 %)
0 diff
(100 %id)
DB307321 corpus callosum SPIRE2.a 2702 to 3244 537 to 1       537/537
(100 %)
2 diff
(99.7 %id)
BX090564 whole brain SPIRE2.a 2764 to 3244 495 to 15   tiling clone, AAA   481/481
(100 %)
0 diff
(100 %id)
AW129526 serous papillary carcinoma, high grade, 2pooled tumors, uterus SPIRE2.a 2822 to 3244 429 to 7       423/429
(98 %)
0 diff
(100 %id)
AI631355 adenocarcinoma, Pancreas SPIRE2.a 2856 to 3244 390 to 2       389/390
(99 %)
0 diff
(100 %id)
AA838078 colon, colon tumor SPIRE2.a 2910 to 3214 303 to 1       303/303
(100 %)
7 diff
(97.7 %id)
R39179 whole brain SPIRE2.a 2963 to 3244 291 to 10       282/296
(95 %)
0 diff
(100 %id)
F10560 brain, total brain SPIRE2.a 3001 to 3244 244 to 1       244/244
(100 %)
1 diff
(99.6 %id)
AA553722 breast SPIRE2.a 3041 to 3244 224 to 21   AAA   204/204
(100 %)
0 diff
(100 %id)
BC111030 Brain, fetal, whole pooled SPIRE2.b 1 to 2171 1 to 2171 exact tiling clone, AAA   2171/2171
(100 %)
2 diff
(100.0 %id)
AB058735 brain SPIRE2.c 1 to 2409 1 to 2409 K259E tiling clone, available from KIAA,   2409/2409
(100 %)
1 diff
(100.0 %id)
CN299765 embryonic stem cells, cell lines H1, H7, andH9 SPIRE2.d 1 to 663 1 to 663   tiling clone,   663/663
(100 %)
1 diff
(99.9 %id)
BC139732 PCR rescued clones SPIRE2.d 469 to 2339 29 to 1899   tiling clone,   1871/1899
(98 %)
7 diff
(99.7 %id)
BC035669 Brain, hippocampus SPIRE2.e 1 to 1369 1369 to 1 exact tiling clone, available from MGC, Submitted on the opposite strand 1369/1369
(100 %)
0 diff
(100 %id)
BC011119 Cervix, carcinoma SPIRE2.f 1 to 1820 1 to 1821 exact tiling clone, available from MGC, AAA   1821/1821
(100 %)
1 diff
(100.0 %id)
BE018027 cervical carcinoma cell line, cervix SPIRE2.f 4 to 506 1 to 503   available from MGC,   503/503
(100 %)
0 diff
(100 %id)
BE301442 cervical carcinoma cell line, cervix SPIRE2.f 1367 to 1823 461 to 4   tiling clone, available from MGC,   458/461
(99 %)
0 diff
(100 %id)
AW794736 uterus SPIRE2.f 1527 to 1888 18 to 381   tiling clone,   364/388
(93 %)
6 diff
(98.5 %id)
AW835430 leiomios SPIRE2.f 1706 to 2195 6 to 512   tiling clone,   507/513
(98 %)
30 diff
(94.2 %id)
BX953704   SPIRE2.g 1 to 366 1 to 369   tiling clone,   369/369
(100 %)
3 diff
(99.2 %id)
CN299764 embryonic stem cells, cell lines H1, H7, andH9 SPIRE2.g 149 to 672 1 to 523   tiling clone,   523/523
(100 %)
1 diff
(99.9 %id)
BX494348 Liver SPIRE2.h 1 to 504 1 to 506   tiling clone,   506/506
(100 %)
4 diff
(99.3 %id)
N21441 melanocyte SPIRE2.h 28 to 236 227 to 19   tiling clone,   209/227
(92 %)
0 diff
(100 %id)
AK130685 synovial membrane (knee) SPIRE2.h 182 to 2396 1 to 2214 exact tiling clone, available from FLJ,   2214/2214
(100 %)
5 diff
(99.8 %id)
AK098674 testis SPIRE2.h 237 to 1665 1427 to 1   tiling clone, available from FLJ, Submitted on the opposite strand 1427/1427
(100 %)
5 diff
(99.7 %id)
BF799783 colon_ins SPIRE2.h 764 to 1092 16 to 344       329/344
(95 %)
6 diff
(98.3 %id)
CR593729 Placenta Cot 25-normalized SPIRE2.h 1295 to 2372 1 to 1078 exact     1078/1078
(100 %)
0 diff
(100 %id)
BX382338 Placenta Cot 25-normalized SPIRE2.h 1295 to 2290 1 to 992 S23T S24Q L25S K26E K27E ...     992/997
(99 %)
39 diff
(96.1 %id)
BX382337 Placenta Cot 25-normalized SPIRE2.h 1316 to 2338 1022 to 1 D2X C31G C33G K89X F99X ...     1022/1022
(100 %)
16 diff
(98.5 %id)
BX440469 brain, fetal brain SPIRE2.h 1342 to 2380 1035 to 1 D2C V3P R4V R5C V6W ...     1035/1037
(99 %)
37 diff
(96.5 %id)
TI_159714792   SPIRE2.h 1558 to 2386 904 to 86 V3L A10P L16X AAA   819/996
(82 %)
16 diff
(98.4 %id)
BG004685 placenta_normal SPIRE2.i 1 to 1531 31 to 549   tiling clone, Suspected internal deletion 524/549
(95 %)
13 diff
(97.7 %id)
BI458886 testis SPIRE2.j-u 1 to 418 1 to 416   tiling clone, available from MGC,   416/669
(62 %)
9 diff
(98.7 %id)
BC035173 testis SPIRE2.j-u 6 to 1994 6 to 1993   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1988/2004
(99 %)
3 diff
(99.9 %id)
AK130680 synovial membrane (knee) SPIRE2.j-u 803 to 2740 1 to 1941 exact tiling clone, available from FLJ,   1941/1941
(100 %)
12 diff
(99.4 %id)
BG057656 blood, lymphocyte SPIRE2.j-u 833 to 1216 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AI188789 placenta SPIRE2.j-u 1561 to 1971 426 to 17   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 410/426
(96 %)
0 diff
(100 %id)
AI085038 liver and spleen SPIRE2.j-u 2468 to 2740 273 to 1       273/273
(100 %)
5 diff
(98.2 %id)
AW139754   SPIRE2.k 1 to 577 13 to 591 G19E S34C F36S T37S I38P ... tiling clone, Submitted on the opposite strand 579/579
(100 %)
2 diff
(99.7 %id)
BF439776 carcinoid, lung SPIRE2.k 3 to 566 1 to 566 G19E S34C F36S T37S I38P ...   Submitted on the opposite strand 566/566
(100 %)
2 diff
(99.7 %id)
AI304858 carcinoid, lung SPIRE2.k 4 to 422 1 to 421   tiling clone, Submitted on the opposite strand 421/421
(100 %)
4 diff
(99.1 %id)
AA180430   SPIRE2.l 1 to 480 1 to 478 exact tiling clone, fully sequenced,   478/478
(100 %)
1 diff
(99.8 %id)
AA176585   SPIRE2.l 450 to 711 275 to 15   tiling clone, fully sequenced, AAA   261/261
(100 %)
1 diff
(99.7 %id)
BF843239 head_neck SPIRE2.m-u 1 to 430 18 to 447   tiling clone,   430/447
(96 %)
6 diff
(98.7 %id)
DW418829 Liver SPIRE2.m-u 136 to 539 12 to 415       404/415
(97 %)
6 diff
(98.6 %id)
CV427929 placenta_normal SPIRE2.m-u 215 to 577 395 to 33   tiling clone, Submitted on the opposite strand 363/395
(91 %)
0 diff
(100 %id)
BQ268883 Pancreas, Purified pancreatic islet SPIRE2.m-u 468 to 1045 1 to 578   tiling clone, Submitted on the opposite strand 578/578
(100 %)
2 diff
(99.7 %id)
AA703956   SPIRE2.m-u 1034 to 1574 1 to 541   tiling clone,   541/541
(100 %)
0 diff
(100 %id)
CK825671 Pancreas, Purified pancreatic islet SPIRE2.m-u 1111 to 1694 584 to 1 exact tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BE141605 head_neck SPIRE2.n-u 1 to 257 1 to 257 R2G N4D C8M W9R D10I ...     257/257
(100 %)
13 diff
(95.0 %id)
BE141606 head_neck SPIRE2.n-u 7 to 257 9 to 253       245/253
(96 %)
6 diff
(97.7 %id)
BE141602 head_neck SPIRE2.n-u 13 to 257 1 to 247   tiling clone,   247/247
(100 %)
1 diff
(99.6 %id)
BE141604 head_neck SPIRE2.n-u 13 to 257 1 to 247       247/247
(100 %)
2 diff
(99.2 %id)
BE141603 head_neck SPIRE2.n-u 15 to 257 1 to 245       245/245
(100 %)
2 diff
(99.2 %id)
BE141642 head_neck SPIRE2.n-u 24 to 264 1 to 244   tiling clone,   244/256
(95 %)
7 diff
(97.3 %id)
BF349252 head_neck SPIRE2.n-u 47 to 257 1 to 216       216/216
(100 %)
8 diff
(96.3 %id)
BE141643 head_neck SPIRE2.n-u 84 to 264 1 to 184       184/210
(87 %)
4 diff
(98.1 %id)
BG007843 placenta_normal Gene SPIRE2, variant not shown         This clone was ignored    
AA234714 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene SPIRE2, variant not shown         This clone was ignored    
AA234782 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene SPIRE2, variant not shown         This clone was ignored    
AA464969 ovarian tumor, ovary Gene SPIRE2, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m-u, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C