To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SPIRE1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
339 supporting clones for gene SPIRE1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ892516 epidermoid carcinoma, cell line, lung .a 1 to 519 1 to 521   tiling clone,   521/910
(57 %)
22 diff
(97.6 %id)
AI271979 Kidney .a 59 to 484 1 to 426     Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AI473198 Kidney .a 59 to 505 1 to 447     Submitted on the opposite strand 447/447
(100 %)
3 diff
(99.4 %id)
AW297424   .a 60 to 405 1 to 346     Submitted on the opposite strand 346/346
(100 %)
2 diff
(99.5 %id)
AB032961 brain .a 83 to 5577 1 to 5495   tiling clone, available from KIAA,   5495/5495
(100 %)
2 diff
(100.0 %id)
DB506330 hypothalamus .a 133 to 614 1 to 482       482/482
(100 %)
5 diff
(99.0 %id)
NM_001128626.1   .a 135 to 5578 1 to 5444   RefSeq,   5444/5444
(100 %)
0 diff
(100 %id)
DR001109 fetal brain .a 141 to 850 8 to 717       710/717
(99 %)
6 diff
(99.2 %id)
CN298877 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 172 to 386 1 to 215       215/215
(100 %)
3 diff
(98.7 %id)
CF593473 Human Placenta, placenta .a 288 to 917 25 to 655       631/967
(65 %)
12 diff
(98.8 %id)
CX762460 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 311 to 1050 1 to 734       734/833
(88 %)
18 diff
(97.9 %id)
DA460439 tongue, tumor tissue .a 450 to 1009 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AA383439 testis .a 546 to 869 1 to 325       325/328
(99 %)
5 diff
(98.5 %id)
BE928711 lung_normal .a 552 to 931 89 to 467       379/469
(80 %)
8 diff
(98.3 %id)
DA403431 thalamus .a 578 to 1132 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB275564 uterus .a 581 to 1123 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BC125206 PCR rescued clones .a 621 to 3825 1 to 3205   tiling clone,   3205/3207
(99 %)
2 diff
(100.0 %id)
AA373844 lung .a 637 to 883 1 to 247       247/247
(100 %)
0 diff
(100 %id)
AW963673   .a 638 to 1089 1 to 454       454/548
(82 %)
8 diff
(98.6 %id)
AI692699 carcinoid, lung .a 750 to 1307 558 to 1       558/558
(100 %)
0 diff
(100 %id)
CV339920 breast .a 778 to 1269 603 to 111     Submitted on the opposite strand 493/603
(81 %)
6 diff
(99.1 %id)
CV391245 nervous_normal .a 870 to 1136 31 to 308       278/308
(90 %)
35 diff
(88.7 %id)
BE826908 lung_tumor .a 940 to 1210 276 to 1       276/337
(81 %)
8 diff
(97.7 %id)
AA928857 carcinoid, lung .a 940 to 1307 368 to 1       368/368
(100 %)
0 diff
(100 %id)
BE826960 lung_tumor .a 948 to 1210 1 to 263       263/263
(100 %)
0 diff
(100 %id)
BE827000 lung_tumor .a 948 to 1210 1 to 262       262/262
(100 %)
1 diff
(99.7 %id)
AW945955 lung_tumor .a 950 to 1210 1 to 261       261/261
(100 %)
1 diff
(99.7 %id)
AW946056 lung_tumor .a 950 to 1210 1 to 261       261/261
(100 %)
0 diff
(100 %id)
AW946061 lung_tumor .a 950 to 1210 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
BE826798 lung_tumor .a 950 to 1210 259 to 1       259/259
(100 %)
3 diff
(98.9 %id)
BE826827 lung_tumor .a 950 to 1208 260 to 2       259/260
(99 %)
1 diff
(99.7 %id)
BE826832 lung_tumor .a 950 to 1210 258 to 1       258/258
(100 %)
4 diff
(98.5 %id)
BE826874 lung_tumor .a 950 to 1216 264 to 5       260/264
(98 %)
3 diff
(98.9 %id)
BE826879 lung_tumor .a 950 to 1214 265 to 1       265/265
(100 %)
0 diff
(100 %id)
BE826885 lung_tumor .a 950 to 1210 259 to 1       259/259
(100 %)
2 diff
(99.3 %id)
BE826888 lung_tumor .a 950 to 1211 262 to 1       262/262
(100 %)
4 diff
(98.5 %id)
BE826892 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
BE826895 lung_tumor .a 950 to 1210 1 to 260       260/260
(100 %)
2 diff
(99.3 %id)
BE826904 lung_tumor .a 950 to 1210 260 to 1       260/260
(100 %)
1 diff
(99.7 %id)
BE826912 lung_tumor .a 950 to 1210 260 to 1       260/260
(100 %)
2 diff
(99.3 %id)
BE826918 lung_tumor .a 950 to 1216 272 to 7       266/272
(97 %)
0 diff
(100 %id)
BE826921 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
BE826923 lung_tumor .a 950 to 1201 255 to 6       250/255
(98 %)
0 diff
(100 %id)
BE826965 lung_tumor .a 950 to 1216 279 to 14       266/279
(95 %)
0 diff
(100 %id)
BE826972 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
0 diff
(100 %id)
BE826980 lung_tumor .a 950 to 1208 261 to 2       260/261
(99 %)
1 diff
(99.7 %id)
BE826981 lung_tumor .a 950 to 1214 265 to 1       265/265
(100 %)
4 diff
(98.5 %id)
BE827007 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
0 diff
(100 %id)
BE827011 lung_tumor .a 950 to 1216 271 to 5       267/271
(98 %)
0 diff
(100 %id)
BE827012 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
BE827021 lung_tumor .a 950 to 1210 261 to 1       261/261
(100 %)
2 diff
(99.3 %id)
BE826869 lung_tumor .a 988 to 1210 18 to 245       231/245
(94 %)
7 diff
(97.2 %id)
BE826871 lung_tumor .a 1029 to 1210 190 to 1       190/204
(93 %)
12 diff
(94.2 %id)
AA381658   .a 1113 to 1311 1 to 199       199/199
(100 %)
2 diff
(99.0 %id)
DA228115 brain .a 1456 to 2015 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA211226 brain .a 1460 to 1922 2 to 464   capped   463/463
(100 %)
0 diff
(100 %id)
BX952231   .a 1466 to 2088 1 to 623       623/623
(100 %)
0 diff
(100 %id)
DA104955 cerebellum .a 1483 to 2065 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
CA391054 eye, RPE/choroid .a 1496 to 2021 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
BG992349 head_neck .a 1513 to 1676 193 to 31       163/201
(81 %)
2 diff
(99.1 %id)
DA411491 thalamus .a 1601 to 2155 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA249605 brain .a 1602 to 2156 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA106234 cerebellum .a 1604 to 2161 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
TI_57244361   .a 1720 to 2537 28 to 849       822/860
(95 %)
18 diff
(98.0 %id)
BI916062 brain .a 1723 to 2537 1 to 819       819/830
(98 %)
13 diff
(98.5 %id)
BX282527 brain .a 1724 to 2245 1 to 522       522/522
(100 %)
0 diff
(100 %id)
CD109293 Pooled-Skin .a 1763 to 2396 1 to 656       656/717
(91 %)
27 diff
(96.3 %id)
DA234423 brain .a 1932 to 2511 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BC016825 Bone marrow, acute myelogenous leukemia .a 1978 to 3458 1 to 1483   available from MGC, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 1483/1483
(100 %)
3 diff
(99.8 %id)
BF242652 bone marrow, from acute myelogenous leukemia .a 1981 to 2391 1 to 408   available from MGC,   408/408
(100 %)
5 diff
(98.8 %id)
DA798037 brain .a 2051 to 2593 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CV028880 mixed .a 2057 to 2451 1 to 395       395/566
(69 %)
1 diff
(99.9 %id)
AA954398 pooled .a 2145 to 2584 440 to 3       438/440
(99 %)
2 diff
(99.6 %id)
DA803238 brain .a 2187 to 2720 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
AK025433   .a 2221 to 4299 1 to 2076   available from FLJ, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2076/2076
(100 %)
5 diff
(99.8 %id)
BM470831 leiomyosarcoma, uterus .a 2221 to 3065 13 to 862       850/1045
(81 %)
21 diff
(98.0 %id)
DA193805 amygdala .a 2227 to 2801 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
Z42232 brain, total brain .a 2231 to 2538 1 to 308       308/308
(100 %)
0 diff
(100 %id)
R25814 whole brain .a 2232 to 2659 1 to 434       434/436
(99 %)
8 diff
(98.2 %id)
H12928 whole brain .a 2232 to 2688 1 to 464       464/464
(100 %)
7 diff
(98.5 %id)
DA803319 brain .a 2232 to 2740 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
BF345984 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2263 to 2980 1 to 710       710/790
(89 %)
10 diff
(98.8 %id)
AA704890 liver and spleen .a 2268 to 2777 510 to 1       510/510
(100 %)
1 diff
(99.9 %id)
AA702600 liver and spleen .a 2296 to 2777 513 to 31   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 483/483
(100 %)
1 diff
(99.8 %id)
R21379 whole brain .a 2329 to 2651 1 to 325   AAA   325/482
(67 %)
3 diff
(99.4 %id)
BE836884 prostate_normal .a 2358 to 2916 605 to 45       561/605
(92 %)
0 diff
(100 %id)
DB529528 hippocampus .a 2373 to 2777 1 to 404     Submitted on the opposite strand 404/404
(100 %)
3 diff
(99.3 %id)
F11410 brain, total brain .a 2413 to 2741 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
AA725672   .a 2439 to 2584 149 to 4       146/149
(97 %)
0 diff
(100 %id)
Z28467 leg muscle, skeletal muscle .a 2497 to 2703 1 to 207       207/207
(100 %)
2 diff
(99.1 %id)
AI263191 pooled .a 2560 to 3018 464 to 6       459/464
(98 %)
0 diff
(100 %id)
BQ720531 sympathetic trunk .a 2645 to 3306 1 to 670   AAA   670/928
(72 %)
39 diff
(95.8 %id)
TI_149315277   .a 2647 to 3415 865 to 98   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 768/977
(78 %)
6 diff
(99.4 %id)
DA146172 amygdala .a 2664 to 3163 2 to 500   capped   499/499
(100 %)
2 diff
(99.6 %id)
EB362348 eye, lens .a 2773 to 3457 685 to 1       685/685
(100 %)
3 diff
(99.6 %id)
CN298879 embryonic stem cells, cell lines H1, H7, andH9 .a 2782 to 3191 1 to 409       409/409
(100 %)
3 diff
(99.3 %id)
AA367511 parotid gland .a 2785 to 2980 1 to 196       196/196
(100 %)
0 diff
(100 %id)
BQ045186 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2790 to 3415 644 to 19   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 626/626
(100 %)
0 diff
(100 %id)
DB526172 testis .a 2806 to 3229 1 to 424     Submitted on the opposite strand 424/424
(100 %)
0 diff
(100 %id)
DB518732 testis .a 2807 to 3229 1 to 424     Submitted on the opposite strand 424/424
(100 %)
6 diff
(98.6 %id)
AA345685 gall bladder .a 2814 to 3062 1 to 249       249/249
(100 %)
0 diff
(100 %id)
AW963255   .a 2815 to 3556 1 to 745       745/765
(97 %)
26 diff
(96.7 %id)
BQ188842 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2816 to 3458 1 to 643   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 643/643
(100 %)
1 diff
(99.9 %id)
TI_151733674   .a 2816 to 3458 724 to 83   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 642/963
(66 %)
1 diff
(99.9 %id)
DA473362   .a 2846 to 3408 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA385513 thalamus .a 2960 to 3554 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
TI_159714285   .a 2962 to 3974 1092 to 90   AAA   1003/1071
(93 %)
18 diff
(98.4 %id)
DA886377   .a 2984 to 3550 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BX500511 Liver .a 2997 to 3687 1 to 691       691/691
(100 %)
4 diff
(99.5 %id)
BX500520 Liver .a 2997 to 3686 1 to 690       690/690
(100 %)
2 diff
(99.8 %id)
CX163377 human embryonic stem cells differentiated toan early endodermal cell type .a 3034 to 3887 1 to 853       853/853
(100 %)
2 diff
(99.8 %id)
DA382111 thalamus .a 3045 to 3600 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
BG576541 breast, mammary adenocarcinoma, cell line .a 3048 to 3698 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
BI861940 breast, mammary adenocarcinoma, cell line .a 3048 to 3835 1 to 788       788/788
(100 %)
14 diff
(98.3 %id)
TI_57193434   .a 3048 to 3835 55 to 842       788/788
(100 %)
14 diff
(98.3 %id)
CK300216 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3054 to 3458 422 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 404/404
(100 %)
0 diff
(100 %id)
FN076408 breast carcinoma .a 3074 to 3137 63 to 1     Submitted on the opposite strand 63/63
(100 %)
1 diff
(98.5 %id)
BQ432566 testis .a 3111 to 3893 1 to 783       783/784
(99 %)
8 diff
(99.0 %id)
TI_149297987   .a 3181 to 3974 871 to 88   AAA   784/927
(84 %)
16 diff
(98.3 %id)
DA180513 amygdala .a 3182 to 3648 2 to 469   capped   468/468
(100 %)
1 diff
(99.8 %id)
BM982969 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3212 to 3974 775 to 19   AAA   757/762
(99 %)
9 diff
(98.9 %id)
TI_157601843   .a 3217 to 3974 835 to 78   AAA   758/879
(86 %)
5 diff
(99.5 %id)
TI_149274070   .a 3232 to 3978 852 to 112       741/1049
(70 %)
0 diff
(100 %id)
T17383   .a 3238 to 3703 463 to 1       463/480
(96 %)
7 diff
(98.6 %id)
BI464777 testis .a 3245 to 3984 1 to 738       738/746
(98 %)
19 diff
(97.5 %id)
CB852071 Human Lung Epithelial cells, lung .a 3251 to 3974 742 to 19   AAA   724/724
(100 %)
1 diff
(99.9 %id)
BQ448036 Knee, Osteoarthritic Cartilage .a 3281 to 3974 711 to 19   AAA   693/693
(100 %)
1 diff
(99.9 %id)
BM544144 ovary (pool of 3) .a 3288 to 4217 12 to 957       946/1065
(88 %)
26 diff
(97.6 %id)
BQ010839 placenta .a 3291 to 3974 702 to 19   AAA   684/684
(100 %)
3 diff
(99.6 %id)
CF529356 placenta .a 3297 to 3974 696 to 19   AAA   678/678
(100 %)
3 diff
(99.6 %id)
BU675996 lung, Primary Lung Epithelial Cells .a 3318 to 3978 689 to 30       660/689
(95 %)
0 diff
(100 %id)
AW166427 cervix .a 3328 to 3831 504 to 1       504/504
(100 %)
4 diff
(99.3 %id)
H05514 whole brain .a 3329 to 3704 384 to 1       384/385
(99 %)
11 diff
(97.2 %id)
CA842222 Pancreas, Purified pancreatic islet .a 3343 to 3791 1 to 449   fully sequenced,   449/449
(100 %)
1 diff
(99.8 %id)
AA195531 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3366 to 3634 1 to 274   fully sequenced,   274/274
(100 %)
0 diff
(100 %id)
R46811 whole brain .a 3385 to 3708 336 to 5       332/354
(93 %)
0 diff
(100 %id)
BG574269 breast, mammary adenocarcinoma, cell line .a 3393 to 4077 1 to 681       681/681
(100 %)
8 diff
(98.9 %id)
T36124 testis .a 3406 to 3715 27 to 339       313/340
(92 %)
5 diff
(98.6 %id)
AA255821 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3409 to 3692 1 to 284   fully sequenced,   284/284
(100 %)
1 diff
(99.7 %id)
BP429519   .a 3419 to 3765 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
BP428797   .a 3420 to 3790 1 to 371       371/371
(100 %)
2 diff
(99.5 %id)
BQ012607 placenta .a 3422 to 3974 571 to 19   AAA   553/553
(100 %)
2 diff
(99.7 %id)
DA372484 thalamus .a 3429 to 4052 2 to 625   capped   624/624
(100 %)
1 diff
(99.9 %id)
BF512188   .a 3430 to 3979 562 to 13   AAA   550/550
(100 %)
1 diff
(99.9 %id)
AI569771 anaplastic oligodendroglioma, brain .a 3436 to 3977 543 to 1       543/543
(100 %)
3 diff
(99.5 %id)
DA512545 brain .a 3446 to 3986 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
TI_157607811   .a 3464 to 3974 604 to 90   AAA   515/562
(91 %)
25 diff
(95.6 %id)
BU785681 Pancreas, Purified pancreatic islet .a 3474 to 3977 504 to 1       504/504
(100 %)
2 diff
(99.7 %id)
AW003015 pooled germ cell tumors .a 3497 to 3812 316 to 1       316/316
(100 %)
1 diff
(99.7 %id)
N51327 multiple sclerosis lesions .a 3503 to 3974 477 to 1       477/478
(99 %)
9 diff
(98.2 %id)
BQ012669 placenta .a 3509 to 3974 484 to 19   AAA   466/466
(100 %)
1 diff
(99.8 %id)
AI379484 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3517 to 3978 465 to 4       462/465
(99 %)
0 diff
(100 %id)
AI652741 pooled germ cell tumors .a 3517 to 3974 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
DB188464 liver, tumor tissue .a 3522 to 4105 2 to 586   capped   585/585
(100 %)
3 diff
(99.5 %id)
AI913230 Kidney .a 3528 to 3978 451 to 1       451/451
(100 %)
4 diff
(99.2 %id)
AI912839 Kidney .a 3535 to 3974 440 to 1       440/440
(100 %)
3 diff
(99.4 %id)
DB014407 esophageal, tumor tissue .a 3542 to 4088 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
BQ012446 placenta .a 3558 to 3974 435 to 19   AAA   417/417
(100 %)
1 diff
(99.8 %id)
BM014740 breast, mammary adenocarcinoma, cell line .a 3586 to 4244 1 to 659       659/898
(73 %)
5 diff
(99.5 %id)
TI_59392789   .a 3586 to 4244 89 to 747       659/898
(73 %)
5 diff
(99.5 %id)
AA195415 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3604 to 3976 372 to 1   fully sequenced,   372/372
(100 %)
1 diff
(99.8 %id)
R46474 whole brain .a 3616 to 3974 377 to 12   AAA   366/368
(99 %)
9 diff
(97.6 %id)
BM829727 stomach .a 3637 to 3973 1 to 337       337/337
(100 %)
10 diff
(97.1 %id)
F09076 brain, total brain .a 3653 to 3974 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AA255822 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3662 to 3974 313 to 1   fully sequenced,   313/313
(100 %)
0 diff
(100 %id)
BQ012237 placenta .a 3671 to 3974 322 to 19   AAA   304/304
(100 %)
1 diff
(99.7 %id)
CF529765 placenta .a 3696 to 3974 297 to 19   AAA   279/279
(100 %)
1 diff
(99.7 %id)
AV728458 hypothalamus .a 3703 to 4347 1 to 646       646/656
(98 %)
8 diff
(98.8 %id)
D79970 aorta .a 3715 to 3979 1 to 265       265/265
(100 %)
4 diff
(98.5 %id)
AA550849 adrenal adenoma, adrenal gland .a 3715 to 4118 1 to 404     Submitted on the opposite strand 404/404
(100 %)
0 diff
(100 %id)
BF672896 muscle (skeletal) .a 3743 to 4427 1 to 678       678/854
(79 %)
27 diff
(96.9 %id)
AI183325 placenta .a 3748 to 3975 228 to 1       228/228
(100 %)
0 diff
(100 %id)
CA841925 Pancreas, Purified pancreatic islet .a 3761 to 3977 217 to 1   fully sequenced,   217/217
(100 %)
0 diff
(100 %id)
DR978300 brain .a 3805 to 3974 1 to 169   AAA Submitted on the opposite strand 169/169
(100 %)
4 diff
(97.7 %id)
BE670879 carcinoid, lung .a 3835 to 3972 154 to 17       138/154
(89 %)
0 diff
(100 %id)
AI572341 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3839 to 3978 143 to 4       140/143
(97 %)
0 diff
(100 %id)
TI_154002268   .a 3853 to 4299 562 to 116   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 447/447
(100 %)
0 diff
(100 %id)
DA511309 brain .a 3858 to 4399 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
CA433287 mixed .a 3874 to 4299 444 to 19   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 426/426
(100 %)
0 diff
(100 %id)
AK128548 trachea .a 3885 to 8794 4910 to 1   tiling clone, available from FLJ, Submitted on the opposite strand 4910/4910
(100 %)
15 diff
(99.7 %id)
DB349574 trachea .a 3885 to 4416 1 to 532     Submitted on the opposite strand 532/534
(99 %)
1 diff
(99.9 %id)
R24788 whole brain .a 3894 to 4259 1 to 372       372/474
(78 %)
6 diff
(98.8 %id)
H19432 whole brain .a 3894 to 4349 1 to 464       464/465
(99 %)
12 diff
(97.5 %id)
R12641 whole brain .a 3901 to 4304 1 to 409       409/410
(99 %)
23 diff
(94.4 %id)
AW953483   .a 3935 to 4696 11 to 773       763/773
(98 %)
6 diff
(99.3 %id)
T09448   .a 3935 to 4316 1 to 384       384/384
(100 %)
2 diff
(99.5 %id)
R19735 whole brain .a 3936 to 4439 1 to 508       508/511
(99 %)
14 diff
(97.3 %id)
R61646 whole brain .a 3936 to 4320 1 to 394       394/394
(100 %)
9 diff
(97.8 %id)
BE876199 large cell carcinoma, undifferentiated, lung .a 3951 to 4663 1 to 712       712/712
(100 %)
18 diff
(97.5 %id)
DA365313 subthalamic nucleus .a 3961 to 4523 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
T90602 lung .a 3969 to 4285 1 to 326       326/331
(98 %)
12 diff
(96.4 %id)
CA390465 eye, RPE/choroid .a 3973 to 4470 1 to 498       498/498
(100 %)
0 diff
(100 %id)
H23374 whole brain .a 4008 to 4450 1 to 454       454/459
(98 %)
17 diff
(96.3 %id)
BU077685 insulinoma, Pancreas .a 4060 to 4577 8 to 525       518/525
(98 %)
8 diff
(98.5 %id)
AA287201 ovarian tumor, ovary .a 4064 to 4550 1 to 486       486/486
(100 %)
2 diff
(99.6 %id)
R24869 whole brain .a 4079 to 4457 1 to 391       391/405
(96 %)
20 diff
(95.1 %id)
Z42669 brain, total brain .a 4089 to 4416 1 to 328       328/328
(100 %)
5 diff
(98.5 %id)
FN085043 breast carcinoma .a 4139 to 4260 119 to 1     Submitted on the opposite strand 119/119
(100 %)
3 diff
(97.5 %id)
EC475329 Prostate .a 4172 to 4289 1 to 117       117/117
(100 %)
1 diff
(99.2 %id)
BM688218 eye, human retina .a 4175 to 4489 323 to 9     Submitted on the opposite strand 315/324
(97 %)
0 diff
(100 %id)
Z19348 leg muscle, skeletal muscle .a 4214 to 4547 335 to 2       334/335
(99 %)
0 diff
(100 %id)
N28938 melanocyte .a 4241 to 4708 1 to 476       476/483
(98 %)
11 diff
(97.8 %id)
FN050847 breast carcinoma .a 4279 to 4361 83 to 1     Submitted on the opposite strand 83/84
(98 %)
0 diff
(100 %id)
AK090999 brain .a 4300 to 6839 2538 to 1   tiling clone, available from FLJ, Submitted on the opposite strand 2538/2538
(100 %)
23 diff
(99.1 %id)
DB303906 brain .a 4300 to 4854 1 to 556     Submitted on the opposite strand 556/556
(100 %)
3 diff
(99.5 %id)
D51172   .a 4300 to 4651 1 to 350     Submitted on the opposite strand 350/358
(97 %)
2 diff
(99.5 %id)
CB141089 Liver .a 4361 to 4978 1 to 620       620/620
(100 %)
4 diff
(99.4 %id)
BQ218924 leiomyosarcoma, uterus .a 4425 to 5309 1 to 894       894/919
(97 %)
16 diff
(98.3 %id)
BE707322 head_neck .a 4450 to 4923 1 to 473       473/473
(100 %)
1 diff
(99.8 %id)
R59463 whole brain .a 4468 to 4883 1 to 424       424/426
(99 %)
13 diff
(97.0 %id)
BP391024 pancreatic islet .a 4470 to 4962 494 to 1       494/499
(98 %)
2 diff
(99.6 %id)
CD516220 White Matter .a 4473 to 5378 27 to 949       923/956
(96 %)
28 diff
(97.1 %id)
CF454420 peripheral nervous system .a 4489 to 5211 28 to 750       723/750
(96 %)
6 diff
(99.2 %id)
BM758149 stomach .a 4547 to 5004 1 to 459       459/459
(100 %)
3 diff
(99.4 %id)
BM835937 stomach .a 4549 to 4699 1 to 151       151/151
(100 %)
0 diff
(100 %id)
BG899305 cartilage .a 4561 to 5049 83 to 571       489/505
(96 %)
6 diff
(98.9 %id)
CA776548 Pancreas, Purified pancreatic islet .a 4618 to 5037 2 to 423   fully sequenced,   422/423
(99 %)
8 diff
(98.2 %id)
BM966980 Islets of Langerhans, Pancreas .a 4622 to 5184 1 to 563   fully sequenced,   563/563
(100 %)
0 diff
(100 %id)
AA094604   .a 4670 to 4806 138 to 2     Submitted on the opposite strand 137/138
(99 %)
0 diff
(100 %id)
TI_149313337   .a 4713 to 5577 955 to 104   AAA   852/953
(89 %)
31 diff
(96.8 %id)
BX118306 parathyroid gland, parathyroid tumor .a 4777 to 5420 1 to 644       644/644
(100 %)
3 diff
(99.6 %id)
W31829 parathyroid gland, parathyroid tumor .a 4777 to 5204 1 to 431       431/431
(100 %)
4 diff
(99.1 %id)
BI010331 lung_normal .a 4796 to 5403 608 to 5       604/612
(98 %)
0 diff
(100 %id)
CA429104 Cell Line, Chondrosarcoma .a 4822 to 5577 770 to 17   AAA   754/754
(100 %)
3 diff
(99.7 %id)
BU623365 cell lines, Enchondroma .a 4823 to 5577 770 to 19   AAA   752/752
(100 %)
4 diff
(99.5 %id)
BU618429 Cell Line, Chondrosarcoma .a 4823 to 5577 769 to 17   AAA   753/753
(100 %)
2 diff
(99.8 %id)
BU619538 Cell Line, Chondrosarcoma .a 4823 to 5577 769 to 17   AAA   753/753
(100 %)
3 diff
(99.7 %id)
BU621603 cell lines, Chondrosarcoma .a 4823 to 5577 771 to 19   AAA   753/753
(100 %)
6 diff
(99.3 %id)
BM995394 Chondrosarcoma, Left Pubic Bone .a 4846 to 5577 746 to 17   AAA   730/731
(99 %)
4 diff
(99.5 %id)
BQ774670 Bone, Human Chondrosarcoma Cell Line .a 4847 to 5577 747 to 17   AAA   731/731
(100 %)
1 diff
(99.9 %id)
BI010760 lung_normal .a 4851 to 5317 485 to 19       467/485
(96 %)
0 diff
(100 %id)
BF977709 melanotic melanoma, high MDR, skin .a 4856 to 5534 1 to 678       678/682
(99 %)
15 diff
(97.9 %id)
CA426703 cell lines, Chondrosarcoma .a 4856 to 5577 739 to 18   AAA   722/722
(100 %)
1 diff
(99.9 %id)
FN084310 breast carcinoma .a 4887 to 4961 1 to 76       76/77
(98 %)
2 diff
(97.5 %id)
CA428813 Cell Line, Chondrosarcoma .a 4908 to 5577 686 to 17   AAA   670/670
(100 %)
1 diff
(99.9 %id)
DB531356 hippocampus .a 4914 to 5577 1 to 663     Submitted on the opposite strand 663/663
(100 %)
1 diff
(99.9 %id)
AW072845 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 4917 to 5577 693 to 30   AAA   664/750
(88 %)
74 diff
(90.2 %id)
BU077458 insulinoma, Pancreas .a 4962 to 5577 628 to 14   AAA   615/615
(100 %)
3 diff
(99.6 %id)
BU752883 placenta .a 4976 to 5577 615 to 16   AAA   600/600
(100 %)
3 diff
(99.5 %id)
BM352856 Pancreas, Purified pancreatic islet .a 4983 to 5543 7 to 566       560/566
(98 %)
6 diff
(99.0 %id)
AW665407 pooled .a 4994 to 5578 584 to 1       584/584
(100 %)
1 diff
(99.9 %id)
CF541356 lung .a 4999 to 5577 595 to 17   AAA   579/579
(100 %)
0 diff
(100 %id)
CA776238 Pancreas, Purified pancreatic islet .a 5007 to 5576 569 to 1   fully sequenced,   569/569
(100 %)
2 diff
(99.7 %id)
AI953024 anaplastic oligodendroglioma, brain .a 5009 to 5577 569 to 2       568/569
(99 %)
0 diff
(100 %id)
BE783557 eye, retinoblastoma .a 5022 to 5578 1 to 554   AAA   554/574
(96 %)
4 diff
(99.4 %id)
BM352544 Pancreas, Purified pancreatic islet .a 5029 to 5578 549 to 1       549/549
(100 %)
2 diff
(99.7 %id)
BM457934 leiomyosarcoma, uterus .a 5050 to 5578 13 to 540   AAA   528/540
(97 %)
5 diff
(99.1 %id)
TI_149305962   .a 5064 to 5577 600 to 87   AAA   514/905
(56 %)
0 diff
(100 %id)
BU686146 lung, Primary Lung Epithelial Cells .a 5064 to 5577 530 to 17   AAA   514/522
(98 %)
0 diff
(100 %id)
AW022944 cochlea, ear .a 5072 to 5437 1 to 365       365/365
(100 %)
5 diff
(98.7 %id)
BF739835 Kidney .a 5072 to 5577 506 to 1       506/506
(100 %)
3 diff
(99.5 %id)
AI570581 anaplastic oligodendroglioma, brain .a 5073 to 5559 486 to 1       486/486
(100 %)
1 diff
(99.8 %id)
DB577629 hypothalamus .a 5088 to 5577 1 to 489     Submitted on the opposite strand 489/489
(100 %)
2 diff
(99.6 %id)
AA443232.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5091 to 5516 1 to 425     also hits gene EXOC2 425/425
(100 %)
1 diff
(99.8 %id)
H98529 melanocyte .a 5097 to 5553 456 to 1       456/460
(99 %)
6 diff
(98.7 %id)
BM714024 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5099 to 5577 1 to 479   AAA   479/479
(100 %)
0 diff
(100 %id)
AA284497 ovarian tumor, ovary .a 5102 to 5575 473 to 1       473/473
(100 %)
1 diff
(99.8 %id)
AI765673 2 pooled tumors (clear cell type), Kidney .a 5108 to 5578 473 to 3       471/473
(99 %)
0 diff
(100 %id)
AI052251 liver and spleen .a 5115 to 5578 463 to 1       463/463
(100 %)
2 diff
(99.6 %id)
AW418961 2 pooled tumors (clear cell type), Kidney .a 5115 to 5578 465 to 3       463/465
(99 %)
0 diff
(100 %id)
AI283137 placenta .a 5120 to 5578 462 to 5       458/462
(99 %)
0 diff
(100 %id)
FN070883 breast carcinoma .a 5125 to 5239 114 to 1     Submitted on the opposite strand 114/117
(97 %)
1 diff
(99.2 %id)
R60979 whole brain .a 5139 to 5578 459 to 9       451/459
(98 %)
0 diff
(100 %id)
AI276972 placenta .a 5139 to 5578 443 to 5       439/443
(99 %)
0 diff
(100 %id)
H19433 whole brain .a 5146 to 5577 455 to 12   AAA   444/491
(90 %)
22 diff
(95.6 %id)
N81166 cochlea, ear .a 5152 to 5413 1 to 262   fully sequenced,   262/262
(100 %)
2 diff
(99.3 %id)
AI218363 pooled .a 5156 to 5578 425 to 4       422/425
(99 %)
0 diff
(100 %id)
BM893716 Islets of Langerhans, Pancreas .a 5156 to 5577 434 to 13   fully sequenced, AAA   422/422
(100 %)
1 diff
(99.8 %id)
AI819979 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 5160 to 5576 416 to 1       416/416
(100 %)
1 diff
(99.8 %id)
R20541 whole brain .a 5168 to 5575 429 to 14   AAA   416/416
(100 %)
30 diff
(92.8 %id)
AI187773   .a 5170 to 5578 410 to 3       408/413
(98 %)
0 diff
(100 %id)
AI823922 2 pooled tumors (clear cell type), Kidney .a 5172 to 5463 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
H23263 whole brain .a 5175 to 5578 421 to 8       414/433
(95 %)
0 diff
(100 %id)
AA102625   .a 5176 to 5576 411 to 3       409/422
(96 %)
0 diff
(100 %id)
AA971941 pooled .a 5181 to 5578 403 to 8       396/403
(98 %)
0 diff
(100 %id)
AI032489 liver and spleen .a 5206 to 5577 370 to 1       370/370
(100 %)
3 diff
(99.2 %id)
AA975354 2 pooled tumors (clear cell type), Kidney .a 5207 to 5578 375 to 6       370/375
(98 %)
0 diff
(100 %id)
AA443194.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5211 to 5575 364 to 1     also hits gene ZNF622 364/364
(100 %)
1 diff
(99.8 %id)
R45152 whole brain .a 5212 to 5578 385 to 9       377/396
(95 %)
0 diff
(100 %id)
AI359631 brain, glioblastoma (pooled) .a 5212 to 5576 365 to 2       364/365
(99 %)
0 diff
(100 %id)
AA857996 adenocarcinoma, colon .a 5215 to 5578 369 to 8       362/369
(98 %)
0 diff
(100 %id)
AA953086 pooled .a 5220 to 5576 358 to 3       356/358
(99 %)
0 diff
(100 %id)
BI495829 cochlea, ear .a 5223 to 5570 12 to 359   fully sequenced,   348/359
(96 %)
6 diff
(98.4 %id)
T34946 Pancreas .a 5224 to 5522 1 to 298       298/298
(100 %)
1 diff
(99.7 %id)
AW955739   .a 5225 to 5789 1 to 564       564/712
(79 %)
4 diff
(99.5 %id)
C02118   .a 5226 to 5577 1 to 352       352/352
(100 %)
2 diff
(99.5 %id)
AI674860 adenocarcinoma, Pancreas .a 5227 to 5577 370 to 21   AAA   350/350
(100 %)
4 diff
(98.9 %id)
AA776510   .a 5243 to 5577 343 to 11   AAA   333/333
(100 %)
2 diff
(99.4 %id)
AA872986 pooled germ cell tumors .a 5249 to 5578 330 to 2       329/330
(99 %)
0 diff
(100 %id)
R59403 whole brain .a 5259 to 5578 339 to 16   AAA   324/348
(93 %)
10 diff
(97.2 %id)
Z38831 brain, total brain .a 5262 to 5577 315 to 1       315/315
(100 %)
1 diff
(99.7 %id)
H97160 melanocyte .a 5272 to 5577 308 to 1       308/354
(87 %)
10 diff
(97.2 %id)
R44572 whole brain .a 5277 to 5578 322 to 11   AAA   312/316
(98 %)
18 diff
(94.4 %id)
BI495828 cochlea, ear .a 5305 to 5583 316 to 38   fully sequenced,   279/316
(88 %)
7 diff
(97.8 %id)
R45520 whole brain .a 5306 to 5578 284 to 11   AAA   274/274
(100 %)
5 diff
(98.2 %id)
W04580 parathyroid gland, parathyroid tumor .a 5307 to 5577 280 to 11   AAA   270/279
(96 %)
5 diff
(98.3 %id)
M62100   .a 5333 to 5561 229 to 1       229/233
(98 %)
6 diff
(97.5 %id)
AI560504 anaplastic oligodendroglioma, brain .a 5355 to 5577 223 to 1       223/223
(100 %)
0 diff
(100 %id)
AI277164 placenta .a 5356 to 5578 227 to 5       223/229
(97 %)
0 diff
(100 %id)
N22268 cochlea, ear .a 5383 to 5577 194 to 1   fully sequenced,   194/194
(100 %)
0 diff
(100 %id)
CK819348 Islets of Langerhans, Pancreas .a 5446 to 5578 1 to 133       133/145
(91 %)
1 diff
(99.4 %id)
BM128650 Islets of Langerhans, Pancreas .a 5462 to 5578 1 to 117       117/122
(95 %)
1 diff
(99.2 %id)
AI808439 pooled .a 6168 to 6704 1 to 538     Submitted on the opposite strand 538/538
(100 %)
5 diff
(99.1 %id)
AW190679 adenocarcinoma, Pancreas .a 7886 to 8430 1 to 545   tiling clone, Submitted on the opposite strand 545/545
(100 %)
3 diff
(99.5 %id)
NM_020148.2   .b 1 to 5402 1 to 5402 exact RefSeq,   5402/5402
(100 %)
0 diff
(100 %id)
BC115005 Embryonic stem cells, cell line (HSF-6, NIHRegistry designation UC06) derived from blastocyst stageembryo cells. Inner cell mass of blastocyst. .b 176 to 3053 1 to 2878   tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 2878/2878
(100 %)
2 diff
(100.0 %id)
AJ277587 brain,testis .b 414 to 5401 1 to 4989   tiling clone,   4989/4989
(100 %)
6 diff
(99.9 %id)
AK290180 thalamus .b 443 to 2598 1 to 2156       2156/2156
(100 %)
0 diff
(100 %id)
BC125207 PCR rescued clones .b 487 to 3649 1 to 3166   tiling clone,   3166/3168
(99 %)
3 diff
(100.0 %id)
BC128430 PCR rescued clones .b 487 to 3649 3171 to 9     Submitted on the opposite strand 3163/3171
(99 %)
0 diff
(100 %id)
BE782810 eye, retinoblastoma .b 774 to 1491 1 to 717       717/718
(99 %)
2 diff
(99.8 %id)
BE782722 eye, retinoblastoma .b 982 to 1635 1 to 657       657/1094
(60 %)
19 diff
(98.3 %id)
R50044 breast .b 1070 to 1439 380 to 4     Submitted on the opposite strand 377/456
(82 %)
10 diff
(97.9 %id)
DA406444 thalamus .b 1113 to 1676 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
AW962855   .b 1125 to 1643 1 to 518       518/522
(99 %)
14 diff
(97.4 %id)
AA311954   .b 1150 to 1562 1 to 415       415/415
(100 %)
3 diff
(99.3 %id)
CN298878 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1182 to 1424 5 to 247       243/247
(98 %)
6 diff
(97.6 %id)
DN991206 brain, whole brain .b 1182 to 1792 9 to 617       609/625
(97 %)
12 diff
(98.1 %id)
DB021948 testis .c 1 to 456 10 to 467   capped   466/466
(100 %)
2 diff
(99.6 %id)
DB034521 testis .c 1 to 566 10 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
NM_001128627.1   .c 1 to 5095 6 to 5100 exact RefSeq,   5100/5100
(100 %)
0 diff
(100 %id)
DB056921 testis .c 1 to 522 6 to 527   tiling clone, capped   526/526
(100 %)
0 diff
(100 %id)
DB026040 testis .c 1 to 553 2 to 555   capped   554/555
(99 %)
6 diff
(99.0 %id)
DB039597 testis .c 1 to 576 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DB086551 testis .c 1 to 567 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB038517 testis .c 9 to 582 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
AK301711 testis .d 1 to 1872 6 to 1877 M127V tiling clone,   1877/1877
(100 %)
1 diff
(100.0 %id)
DC394668 testis .d 1 to 503 6 to 508       508/508
(100 %)
1 diff
(99.9 %id)
DA009629 adrenal gland .e 1 to 549 2 to 550   tiling clone, capped   549/549
(100 %)
2 diff
(99.7 %id)
BX477529   .e 539 to 1116 1 to 578   tiling clone,   578/578
(100 %)
0 diff
(100 %id)
BI826031 brain, medulla .e 1081 to 1802 1 to 722   tiling clone,   722/722
(100 %)
0 diff
(100 %id)
TI_57173724   .e 1081 to 1802 28 to 749       722/749
(96 %)
6 diff
(99.2 %id)
DB228795 trachea .e 1152 to 1720 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
AL833817 testis .f -9 to 2099 1 to 2109 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2109/2109
(100 %)
2 diff
(100.0 %id)
DB039617 testis .g 1 to 566 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DB446550 testis .g 5 to 695 1 to 690   tiling clone,   690/694
(99 %)
5 diff
(99.3 %id)
DB020396 testis .g 6 to 546 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
TI_57171076   .g 675 to 1539 69 to 934   tiling clone,   866/934
(92 %)
13 diff
(98.7 %id)
BI830317 brain, medulla .g 677 to 1539 1 to 864   tiling clone,   864/864
(100 %)
6 diff
(99.4 %id)
DB236589 trachea .h 1 to 581 2 to 584   tiling clone, capped   583/583
(100 %)
2 diff
(99.7 %id)
BX476521   .h 235 to 770 1 to 536   tiling clone,   536/536
(100 %)
0 diff
(100 %id)
BF765893 colon_est .h 688 to 995 310 to 3   tiling clone, Submitted on the opposite strand 308/345
(89 %)
2 diff
(99.5 %id)
DA402426 thalamus .h 786 to 1268 2 to 484   tiling clone, capped   483/483
(100 %)
1 diff
(99.8 %id)
DB222910 trachea .h 859 to 1420 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BE077186 breast .h 876 to 1303 443 to 16     Submitted on the opposite strand 428/443
(96 %)
2 diff
(99.6 %id)
DB728061 testis .h 878 to 1569 1 to 688     Submitted on the opposite strand 688/690
(99 %)
15 diff
(97.9 %id)
DB460772 testis .h 878 to 1259 1 to 382       382/382
(100 %)
1 diff
(99.8 %id)
CB145520 Liver .h 903 to 1488 1 to 587   tiling clone,   587/587
(100 %)
3 diff
(99.5 %id)
DB350343 trachea .h 1328 to 1765 439 to 1   tiling clone,   439/444
(98 %)
2 diff
(99.6 %id)
DA248623 brain .i 1 to 586 2 to 587 exact tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
DB041208 testis .j 1 to 545 2 to 547 L35X D36G Y37L G38W L39F ... tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
DB057617 testis .k 1 to 535 2 to 536 exact tiling clone, capped   535/535
(100 %)
0 diff
(100 %id)
CB119339 Liver .l-u 1 to 636 643 to -6 exact tiling clone, Submitted on the opposite strand 643/643
(100 %)
1 diff
(99.9 %id)
AA652663   .l-u 278 to 593 1 to 316       316/316
(100 %)
5 diff
(98.5 %id)
AW083947 colon, moderately differentiated adenocarcinoma .l-u 450 to 907 466 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 454/454
(100 %)
5 diff
(98.9 %id)
BG014037 placenta_normal .l-u 673 to 952 280 to 1   tiling clone,   280/280
(100 %)
3 diff
(99.0 %id)
BF881047 lung_tumor .l-u 770 to 1151 28 to 412   tiling clone,   385/412
(93 %)
6 diff
(98.6 %id)
BF881094 lung_tumor .l-u 805 to 1157 55 to 409       355/409
(86 %)
23 diff
(94.4 %id)
DB036377 testis .m 1 to 565 2 to 567 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DB076029 testis .n 1 to 532 8 to 540 exact tiling clone, capped   533/533
(100 %)
2 diff
(99.7 %id)
AV708343 adrenal gland Gene SPIRE1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF833367 head_neck Gene SPIRE1, variant not shown         Submitted on the opposite strand    
AV729267 hypothalamus Gene SPIRE1, variant not shown         Suspected internal deletion, this clone was ignored    
DB214174 trachea Gene SPIRE1, variant not shown       capped This clone was ignored    
DB348950 trachea Gene SPIRE1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI