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Gene SPINLW1andWFDC6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
95 supporting clones for gene SPINLW1andWFDC6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC395362 testis .a 1 to 559 4 to 562   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
DC395146 testis .a 1 to 550 2 to 551       551/551
(100 %)
2 diff
(99.7 %id)
DC396365 testis .a 1 to 574 2 to 575   tiling clone,   575/575
(100 %)
2 diff
(99.7 %id)
AL449631 testis .a 438 to 898 1 to 461   tiling clone, AAA   461/461
(100 %)
2 diff
(99.6 %id)
BG216922   .a 459 to 898 460 to 19   AAA Submitted on the opposite strand 442/442
(100 %)
3 diff
(99.4 %id)
BF376055 testis_normal .a 506 to 829 15 to 337       323/346
(93 %)
14 diff
(96.0 %id)
BF376068 testis_normal .a 510 to 829 9 to 328       320/337
(94 %)
8 diff
(97.7 %id)
AW183270 pooled .a 672 to 882 212 to 1       212/212
(100 %)
6 diff
(97.2 %id)
AK301937 testis .b 1 to 1131 1 to 1131 exact tiling clone,   1131/1131
(100 %)
0 diff
(100 %id)
BC003675 testis .b 1 to 203 1 to 203   available from MGC,   203/220
(92 %)
6 diff
(97.3 %id)
DC395906 testis .b 1 to 623 1 to 624 G66E E78R M79N P80A E82R ...     624/624
(100 %)
2 diff
(99.7 %id)
DC396264 testis .b 1 to 595 1 to 595 exact     595/595
(100 %)
0 diff
(100 %id)
DC396197 testis .b 4 to 502 1 to 499       499/499
(100 %)
2 diff
(99.6 %id)
DC399229 testis .b 9 to 588 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
CD359782 testis .b 16 to 462 1 to 446       446/1268
(35 %)
10 diff
(99.3 %id)
H56777   .b 19 to 190 1 to 172       172/172
(100 %)
3 diff
(98.3 %id)
BI519942 brain, medulla .b 21 to 932 1 to 909 W94V Y95V D96*     909/953
(95 %)
34 diff
(96.5 %id)
TI_43963954   .b 21 to 932 50 to 958 W94V Y95V D96*     909/1002
(90 %)
40 diff
(96.1 %id)
DC398507 testis .b 22 to 593 1 to 572 exact     572/572
(100 %)
0 diff
(100 %id)
BX094264   .b 33 to 254 1 to 222       222/227
(97 %)
1 diff
(99.6 %id)
TI_1948210302   .b 44 to 436 125 to 517       393/1236
(31 %)
9 diff
(99.3 %id)
BI520769 brain, medulla .b 1273 to 1785 549 to 1       874/1058
(82 %)
89 diff
(91.6 %id)
TI_43963955   .b 1273 to 1785 549 to 1   tiling clone,   874/1058
(82 %)
89 diff
(91.6 %id)
AK311906 testis .c 1 to 469 2 to 470 T25A tiling clone,   470/470
(100 %)
1 diff
(99.8 %id)
DB057363 testis .c 1 to 532 2 to 533 T25A capped   532/532
(100 %)
1 diff
(99.9 %id)
FE192909   .c 17 to 548 111 to 643 exact     533/643
(82 %)
8 diff
(98.8 %id)
DA821702 pericardium .c 25 to 577 2 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
DB056780 testis .c 25 to 553 2 to 531 C69M L70F D71R L72S K73Q ... capped   530/530
(100 %)
3 diff
(99.5 %id)
DB093771 testis .c 25 to 520 2 to 497 C69M L70F D71R L72S K73Q ... capped   496/567
(87 %)
8 diff
(98.6 %id)
TI_57171569   .c 34 to 764 29 to 757 G21D P22L G23V L24*     729/975
(74 %)
11 diff
(98.9 %id)
BC044829 Brain, adult medulla .c 36 to 765 1 to 730 exact available from MGC, AAA   730/730
(100 %)
1 diff
(99.9 %id)
TI_57176287   .c 36 to 599 74 to 635 G21D P22L G23V L24*     562/856
(65 %)
14 diff
(98.4 %id)
NM_020398.2   .c 36 to 1985 1 to 1950 exact RefSeq, AAA   1950/1950
(100 %)
0 diff
(100 %id)
BI829722 brain, medulla .c 37 to 599 1 to 562 G21D P22L G23V L24*     562/783
(71 %)
12 diff
(98.5 %id)
BC053369 Brain, adult medulla .c 41 to 765 1 to 725 exact available from MGC, AAA   725/725
(100 %)
1 diff
(99.9 %id)
BI828181 brain, medulla .c 41 to 764 1 to 723 G21D P22L G23V L24*     723/941
(76 %)
7 diff
(99.3 %id)
AL118493   .c 45 to 766 1 to 722 exact     722/722
(100 %)
0 diff
(100 %id)
AX810710   .c 46 to 768 9 to 731 exact AAA   723/731
(98 %)
7 diff
(99.1 %id)
AX810725   .c 46 to 767 9 to 731 N113K N114Q N115* AAA   723/731
(98 %)
8 diff
(99.0 %id)
DB030582 testis .c 46 to 631 2 to 587 exact capped   586/586
(100 %)
1 diff
(99.9 %id)
DB054070 testis .c 46 to 617 2 to 573 exact capped   572/572
(100 %)
1 diff
(99.9 %id)
AF286368 testis; epididymis .c 47 to 768 1 to 722 exact AAA   722/722
(100 %)
0 diff
(100 %id)
AF286370 testis .c 47 to 1985 1 to 1939 exact tiling clone, AAA   1939/1939
(100 %)
0 diff
(100 %id)
TI_1948210085   .c 67 to 467 139 to 540   fully sequenced,   402/540
(74 %)
13 diff
(97.6 %id)
TI_1948210301   .c 67 to 468 136 to 537       402/740
(54 %)
6 diff
(99.2 %id)
TI_1948210304   .c 67 to 468 527 to 126       402/719
(55 %)
1 diff
(99.9 %id)
EL734757 mixed .c 68 to 468 1 to 401       401/571
(70 %)
0 diff
(100 %id)
TI_1948210516   .c 151 to 468 442 to 124       319/1380
(23 %)
7 diff
(99.5 %id)
TI_1948210086   .c 210 to 468 392 to 134   fully sequenced,   259/287
(90 %)
0 diff
(100 %id)
AI023486   .c 276 to 767 495 to 4       492/495
(99 %)
0 diff
(100 %id)
AI810014 pooled .c 278 to 765 501 to 14   AAA   488/488
(100 %)
15 diff
(97.0 %id)
BF091961 testis_normal .c 283 to 750 476 to 9       468/476
(98 %)
0 diff
(100 %id)
AI003865   .c 289 to 766 481 to 3       479/483
(99 %)
2 diff
(99.6 %id)
AI222418 pooled .c 290 to 765 492 to 17   AAA   476/476
(100 %)
1 diff
(99.8 %id)
AI805841 pooled .c 296 to 767 483 to 12   AAA   472/472
(100 %)
11 diff
(97.7 %id)
AW183450 pooled .c 299 to 767 475 to 4       472/475
(99 %)
10 diff
(97.9 %id)
AI633364 pooled germ cell tumors .c 302 to 767 466 to 1       466/466
(100 %)
0 diff
(100 %id)
AA725746   .c 318 to 766 452 to 4       449/452
(99 %)
4 diff
(99.2 %id)
BU570621 testis .c 349 to 765 1 to 418       418/461
(90 %)
4 diff
(99.2 %id)
AW449129   .c 402 to 779 395 to 18   AAA   378/378
(100 %)
1 diff
(99.8 %id)
AL449635 testis .c 425 to 717 1 to 295       295/295
(100 %)
12 diff
(96.0 %id)
AA759074   .c 433 to 768 343 to 8       336/343
(97 %)
0 diff
(100 %id)
AL449632 testis .c 437 to 774 1 to 338   AAA   338/338
(100 %)
3 diff
(99.2 %id)
AI915329 pooled .c 459 to 767 312 to 4       309/315
(98 %)
0 diff
(100 %id)
AW182111 pooled .c 463 to 768 310 to 4       307/310
(99 %)
0 diff
(100 %id)
AI648695 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 466 to 765 300 to 1       300/300
(100 %)
1 diff
(99.7 %id)
AW196508 pooled germ cell tumors .c 468 to 767 307 to 1       307/307
(100 %)
9 diff
(97.1 %id)
AW024094 pooled germ cell tumors .c 469 to 768 304 to 5       300/304
(98 %)
0 diff
(100 %id)
AA860417   .c 513 to 780 271 to 4       268/271
(98 %)
0 diff
(100 %id)
AI217846   .c 614 to 768 163 to 9       155/163
(95 %)
0 diff
(100 %id)
AA452055   .c 1075 to 1509 1 to 435       435/435
(100 %)
1 diff
(99.8 %id)
BF887463 testis_normal .c 1225 to 1581 383 to 27     Submitted on the opposite strand 357/412
(86 %)
0 diff
(100 %id)
AI374968   .c 1515 to 1884 372 to 3       370/372
(99 %)
0 diff
(100 %id)
AI039400   .c 1518 to 1884 369 to 3       367/369
(99 %)
0 diff
(100 %id)
AA451856   .c 1614 to 1884 273 to 3       271/273
(99 %)
0 diff
(100 %id)
BF057305 pooled germ cell tumors .d 1 to 699 702 to 5 L2Y L5F L6W V7M L8Q ... tiling clone,   698/702
(99 %)
17 diff
(97.6 %id)
AI950231 pooled germ cell tumors .d 210 to 699 494 to 6   tiling clone,   489/494
(98 %)
0 diff
(100 %id)
AF286369 epipidymis .e 1 to 1217 1 to 1217 exact tiling clone, AAA   1217/1217
(100 %)
0 diff
(100 %id)
NM_181502.1   .e 1 to 2434 1 to 2434 exact RefSeq, AAA   2434/2434
(100 %)
0 diff
(100 %id)
AF411861   .f 1 to 619 1 to 619 exact tiling clone,   619/619
(100 %)
0 diff
(100 %id)
NM_080827.1   .f 1 to 619 1 to 619 exact RefSeq,   619/619
(100 %)
0 diff
(100 %id)
BC101600 Brain, cerebral cortex and lung, PCR rescuedclones .f 6 to 429 1 to 424       424/424
(100 %)
0 diff
(100 %id)
BC101604 Brain, cerebral cortex and lung, PCR rescuedclones .f 6 to 433 1 to 428       428/428
(100 %)
0 diff
(100 %id)
TI_927045006   .f 6 to 434 479 to 51     Submitted on the opposite strand 429/1246
(34 %)
0 diff
(100 %id)
TI_927045012   .f 6 to 434 477 to 49     Submitted on the opposite strand 429/1146
(37 %)
0 diff
(100 %id)
TI_927045007   .f 6 to 433 482 to 55     Submitted on the opposite strand 428/1241
(34 %)
0 diff
(100 %id)
TI_927045013   .f 6 to 433 482 to 55     Submitted on the opposite strand 428/1143
(37 %)
0 diff
(100 %id)
DB068607 testis .g 1 to 547 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DB094700 testis .g 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
AK126022 testis .g 44 to 4060 1 to 4018 G66E tiling clone, available from FLJ,   4018/4018
(100 %)
4 diff
(100.0 %id)
DB082149 testis .g 45 to 506 2 to 463   capped   462/462
(100 %)
1 diff
(99.8 %id)
BF887759 testis_normal .g 1085 to 1604 533 to 14     Submitted on the opposite strand 520/533
(97 %)
0 diff
(100 %id)
AA719397   .g 2505 to 2973 13 to 481     Submitted on the opposite strand 469/481
(97 %)
6 diff
(98.8 %id)
BF091976 testis_normal .g 2868 to 3153 289 to 1       289/289
(100 %)
5 diff
(98.3 %id)
DB340888 testis .g 3514 to 4060 548 to 1       548/548
(100 %)
2 diff
(99.7 %id)
BX091368   Gene SPINLW1andWFDC6, variant not shown              
BX281949 pooled Gene SPINLW1andWFDC6, variant not shown       AAA This clone was ignored    
AA626362   Gene SPINLW1andWFDC6, variant not shown              
BE044426 pooled Gene SPINLW1andWFDC6, variant not shown         This clone was ignored    
DB071952 testis Gene SPINLW1andWFDC6, variant not shown       capped      
DB340270 testis Gene SPINLW1andWFDC6, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC